Running as unit: rb-build-amd64_10-22724.service ==================================================================================== Tue Nov 12 03:21:15 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_10) on jenkins, called using "ionos5-amd64 ionos1-amd64" as arguments. Tue Nov 12 03:21:15 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-bACupk1v" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Nov 12 03:21:15 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Tue Nov 12 03:21:15 UTC 2024 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-f9laHR' Tue Nov 12 03:21:15 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Tue Nov 12 03:21:15 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-CO2LqL' ok, let's check if fenics-dolfinx is building anywhere yet… ok, fenics-dolfinx is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of fenics-dolfinx in unstable on amd64 on jenkins now. 1st build will be done on ionos5-amd64.debian.net. 2nd build will be done on ionos1-amd64.debian.net. ============================================================================= Tue Nov 12 03:21:35 UTC 2024 I: starting to build fenics-dolfinx/unstable/amd64 on jenkins on '2024-11-12 03:21' Tue Nov 12 03:21:35 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/22724/console.log 1731381695 amd64 unstable fenics-dolfinx Tue Nov 12 03:21:35 UTC 2024 I: Downloading source for unstable/fenics-dolfinx=1:0.9.0-2 --2024-11-12 03:21:35-- http://deb.debian.org/debian/pool/main/f/fenics-dolfinx/fenics-dolfinx_0.9.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 4211 (4.1K) [text/prs.lines.tag] Saving to: ‘fenics-dolfinx_0.9.0-2.dsc’ 0K .... 100% 454M=0s 2024-11-12 03:21:35 (454 MB/s) - ‘fenics-dolfinx_0.9.0-2.dsc’ saved [4211/4211] --2024-11-12 03:21:35-- http://deb.debian.org/debian/pool/main/f/fenics-dolfinx/fenics-dolfinx_0.9.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 4211 (4.1K) [text/prs.lines.tag] Saving to: ‘fenics-dolfinx_0.9.0-2.dsc’ 0K .... 100% 454M=0s 2024-11-12 03:21:35 (454 MB/s) - ‘fenics-dolfinx_0.9.0-2.dsc’ saved [4211/4211] Tue Nov 12 03:21:35 UTC 2024 I: fenics-dolfinx_0.9.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fenics-dolfinx Binary: libdolfinx-dev, libdolfinx-real-dev, libdolfinx-complex-dev, libdolfinx-real0.9, libdolfinx-complex0.9, python3-dolfinx, python3-dolfinx-real, python3-dolfinx-complex, dolfinx-doc Architecture: any all Version: 1:0.9.0-2 Maintainer: Debian Science Maintainers Uploaders: Drew Parsons , Francesco Ballarin Homepage: https://fenicsproject.org Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/science-team/fenics/fenics-dolfinx Vcs-Git: https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, python3-all, python3-all-dev, python3-decorator, python3-gmsh, python3-matplotlib, python3-pip, python3-pytest, python3-requests, python3-scipy, python3-virtualenv Build-Depends: cmake, debhelper-compat (= 13), dh-python, gfortran, catch2 (>= 3~), chrpath, libbasix-dev (>= 0.9.0~), python3-basix, libboost-chrono-dev, libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev, libhdf5-mpi-dev, libadios2-mpi-c++11-dev [amd64 arm64 mips64el ppc64el riscv64 s390x loong64 ppc64 sparc64], libpugixml-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, libpetsc-real-dev, libpetsc-complex-dev, libslepc-real-dev, libslepc-complex-dev, python3-setuptools, pybuild-plugin-pyproject, python3-petsc4py, python3-petsc4py-real, python3-petsc4py-complex, python3-slepc4py, python3-slepc4py-real, python3-slepc4py-complex, pkgconf, python3-all-dev, python3-cffi, python3-pkg-resources, python3-ffcx (>= 1:0.9.0~), python3-ffcx (<< 1:0.10.0), python3-ufl (>= 2024.2.0~), python3-mpi4py, python3-nanobind (>= 2.0.0~), python3-numpy (>= 1:1.21~), python3-pip, python3-ply, python3-pytest , python3-pusimp (>= 0.1.1~), python3-requests , python3-scikit-build-core, python3-scipy , python3-sphinx, python3-virtualenv, libspdlog-dev Build-Depends-Indep: doxygen, graphviz, libjs-mathjax, libjs-modernizr, python3-jupytext, python3-matplotlib, python3-myst-parser, python3-sphinx-rtd-theme Package-List: dolfinx-doc deb doc optional arch=all libdolfinx-complex-dev deb libdevel optional arch=any libdolfinx-complex0.9 deb libs optional arch=any libdolfinx-dev deb libdevel optional arch=any libdolfinx-real-dev deb libdevel optional arch=any libdolfinx-real0.9 deb libs optional arch=any python3-dolfinx deb python optional arch=any python3-dolfinx-complex deb python optional arch=any python3-dolfinx-real deb python optional arch=any Checksums-Sha1: b00d36e013d78564a549482530cde0501352eb22 778388 fenics-dolfinx_0.9.0.orig.tar.gz 8deb240757ee43beaa125e87e7eb522bd292953d 44840 fenics-dolfinx_0.9.0-2.debian.tar.xz Checksums-Sha256: 8caf7bc7beabe66d8f0e130fa3ef2e65b074952aef88d13314a548894e8f0b03 778388 fenics-dolfinx_0.9.0.orig.tar.gz 53cfae1cdb7004c5e3cbb8188bed6a78581a2296b843325b3cd4a026f68e19a1 44840 fenics-dolfinx_0.9.0-2.debian.tar.xz Files: 52117cfda6fc7237fb42c7687158de52 778388 fenics-dolfinx_0.9.0.orig.tar.gz 0e8cad0880317f9801cddd52fbcdcd2d 44840 fenics-dolfinx_0.9.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEG10EseUHu/A2aeK4AfNfwz5zr4wFAmcwcxAACgkQAfNfwz5z r4yGJxAArCRqVZrMuH/MJcGq8vc7krTa7EpnehxsBy3WnISxQI7ZCkgeBY4qiU6Y EwtYAaeSkbheWcV8x7m7IzG/WsZ6v14upurrcHGTKSLGZVmatdJoYBbPOEtsPZMG QK1PbzgoNvJT05zmGQlT/iz5DoJ23iH3ZKa+azssLJ11gQoTA0QptRr8wCFsZKNg /d8ASXkXZshx2SSCDPboFnfnO8ipYspy4z5XklxWGGdNMwZvtwzfdkFBwyLKdDyo xSbIT4w3ZgGUjresnycJtaEXPe+Z9Jjq8MssFrl5ob2igWlKp35HuRpIT2r0abNo pULogso+KU7oCTlc0SZlU9kjj9dJ2tHQk9XT/D/shLS2cf1BzljAHGki88LYQ8iD w5r3lL+Rqu6PmOx9RNrcy01/tvLxPXZwnYBJmRdTDUXeXLbyGgZZUX+YQKv7j0ty Nu54UkCfn/wh/WdiVnK5MA5c0BHUe1YTI4Vxh1KSZ3AsgWjnQZuj5+bPuvdzvnJg ++aJFfPOyLBEZPvMo8VdbBE7elG/ronTb4HGaNwbme1ZdFYleqL8Z8n5APax4ZP0 fowCmwJeDCUeEZdFk+sVgScLeNs2mZBsUiwzM2N8wjHGCABdHBtWAEy3T8+DzfYm +fpyxZbysiD7KAr6sMQFq1EczsFo37RPbIyYtPm2Q9TclxPDQiI= =ecQB -----END PGP SIGNATURE----- Tue Nov 12 03:21:35 UTC 2024 I: Checking whether the package is not for us Tue Nov 12 03:21:35 UTC 2024 I: Starting 1st build on remote node ionos5-amd64.debian.net. Tue Nov 12 03:21:35 UTC 2024 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Tue Nov 12 03:21:35 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Tue Nov 12 03:21:35 UTC 2024 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-GHJPG8' ==================================================================================== Mon Dec 15 09:44:37 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos5-amd64, called using "1 fenics-dolfinx unstable /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl 1:0.9.0-2" as arguments. Mon Dec 15 09:44:37 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-ebsjGCMm" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Dec 15 09:44:37 UTC 2025 I: Downloading source for unstable/fenics-dolfinx=1:0.9.0-2 Reading package lists... NOTICE: 'fenics-dolfinx' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git Please use: git clone https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 827 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (dsc) [4211 B] Get:2 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (tar) [778 kB] Get:3 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (diff) [44.8 kB] Fetched 827 kB in 0s (23.6 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'fenics-dolfinx' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git Please use: git clone https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 827 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (dsc) [4211 B] Get:2 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (tar) [778 kB] Get:3 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (diff) [44.8 kB] Fetched 827 kB in 0s (23.6 MB/s) Download complete and in download only mode ============================================================================= Building fenics-dolfinx in unstable on amd64 on ionos5-amd64 now. Date: Mon Dec 15 09:44:37 UTC 2025 Date UTC: Mon Dec 15 09:44:37 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Dec 14 21:44:37 -12 2025 I: pbuilder-time-stamp: 1765791877 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenics-dolfinx_0.9.0-2.dsc] I: copying [./fenics-dolfinx_0.9.0.orig.tar.gz] I: copying [./fenics-dolfinx_0.9.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Nov 10 08:47:12 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenics-dolfinx_0.9.0-2.dsc: no acceptable signature found dpkg-source: info: extracting fenics-dolfinx in fenics-dolfinx-0.9.0 dpkg-source: info: unpacking fenics-dolfinx_0.9.0.orig.tar.gz dpkg-source: info: unpacking fenics-dolfinx_0.9.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying extra_CXXFLAGS.patch dpkg-source: info: applying python_cmake_module_path.patch dpkg-source: info: applying lib_rename.patch dpkg-source: info: applying python_unit_test_32bit.patch dpkg-source: info: applying docs_local_mathjax.patch dpkg-source: info: applying debian_version_id.patch dpkg-source: info: applying demo_no_vtk_adios2.patch dpkg-source: info: applying adios_config_mpi.patch dpkg-source: info: applying big_endian_skip_adios2_tests.patch dpkg-source: info: applying python_local_license.patch dpkg-source: info: applying pusimp.patch dpkg-source: info: applying drop_Werror.patch dpkg-source: info: applying demo_stokes_mumps_instead_of_superlu_dist.patch dpkg-source: info: applying test_adios2_skip.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/500505/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='65ca1a013bcc482d9ad70d68a25fe160' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='500505' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_Eds6 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1 --logfile b1/build.log fenics-dolfinx_0.9.0-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/500505/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), dh-python, gfortran, catch2 (>= 3~), chrpath, libbasix-dev (>= 0.9.0~), python3-basix, libboost-chrono-dev, libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev, libhdf5-mpi-dev, libadios2-mpi-c++11-dev, libpugixml-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, libpetsc-real-dev, libpetsc-complex-dev, libslepc-real-dev, libslepc-complex-dev, python3-setuptools, pybuild-plugin-pyproject, python3-petsc4py, python3-petsc4py-real, python3-petsc4py-complex, python3-slepc4py, python3-slepc4py-real, python3-slepc4py-complex, pkgconf, python3-all-dev, python3-cffi, python3-pkg-resources, python3-ffcx (>= 1:0.9.0~), python3-ffcx (<< 1:0.10.0), python3-ufl (>= 2024.2.0~), python3-mpi4py, python3-nanobind (>= 2.0.0~), python3-numpy (>= 1:1.21~), python3-pip, python3-ply, python3-pytest, python3-pusimp (>= 0.1.1~), python3-requests, python3-scikit-build-core, python3-scipy, python3-sphinx, python3-virtualenv, libspdlog-dev, doxygen, graphviz, libjs-mathjax, libjs-modernizr, python3-jupytext, python3-matplotlib, python3-myst-parser, python3-sphinx-rtd-theme dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on catch2 (>= 3~); however: Package catch2 is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on libbasix-dev (>= 0.9.0~); however: Package libbasix-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-basix; however: Package python3-basix is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono-dev; however: Package libboost-chrono-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-mpi-dev; however: Package libboost-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libadios2-mpi-c++11-dev; however: Package libadios2-mpi-c++11-dev is not installed. pbuilder-satisfydepends-dummy depends on libpugixml-dev; however: Package libpugixml-dev is not installed. pbuilder-satisfydepends-dummy depends on libsuitesparse-dev; however: Package libsuitesparse-dev is not installed. pbuilder-satisfydepends-dummy depends on libscotch-dev; however: Package libscotch-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-real-dev; however: Package libpetsc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-complex-dev; however: Package libpetsc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-real-dev; however: Package libslepc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-complex-dev; however: Package libslepc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py; however: Package python3-petsc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-real; however: Package python3-petsc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-complex; however: Package python3-petsc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py; however: Package python3-slepc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-real; however: Package python3-slepc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-complex; however: Package python3-slepc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-cffi; however: Package python3-cffi is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (>= 1:0.9.0~); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (<< 1:0.10.0); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ufl (>= 2024.2.0~); however: Package python3-ufl is not installed. pbuilder-satisfydepends-dummy depends on python3-mpi4py; however: Package python3-mpi4py is not installed. pbuilder-satisfydepends-dummy depends on python3-nanobind (>= 2.0.0~); however: Package python3-nanobind is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1:1.21~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-ply; however: Package python3-ply is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pusimp (>= 0.1.1~); however: Package python3-pusimp is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-scikit-build-core; however: Package python3-scikit-build-core is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-virtualenv; however: Package python3-virtualenv is not installed. pbuilder-satisfydepends-dummy depends on libspdlog-dev; however: Package libspdlog-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on libjs-modernizr; however: Package libjs-modernizr is not installed. pbuilder-satisfydepends-dummy depends on python3-jupytext; however: Package python3-jupytext is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} catch2{a} chrpath{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} graphviz{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libabsl20230802{a} libadios2-common-c++11-dev{a} libadios2-common-core-dev{a} libadios2-mpi-auxiliary-2.10{a} libadios2-mpi-auxiliary-dev{a} libadios2-mpi-c++11-2.10{a} libadios2-mpi-c++11-dev{a} libadios2-mpi-core-2.10{a} libadios2-mpi-core-dev{a} libadios2-mpi-plugins{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamd3{a} libamdhip64-5{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libavif16{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcairo2{a} libcamd3{a} libcatch2-dev{a} libcbor0.10{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp19{a} libclang1-19{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfmt-dev{a} libfmt10{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1t64{a} libhdf5-openmpi-cpp-103-1t64{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102t64{a} libhdf5-openmpi-hl-100t64{a} libhdf5-openmpi-hl-cpp-100t64{a} libhdf5-openmpi-hl-fortran-100t64{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.31.0{a} libhypre-dev{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libimagequant0{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-modernizr{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libmunge2{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenjp2-7{a} libopenmpi-dev{a} libopenmpi3t64{a} libp11-kit-dev{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpathplan4{a} libpciaccess0{a} libpetsc-complex-dev{a} libpetsc-complex3.21{a} libpetsc-complex3.21-dev{a} libpetsc-real-dev{a} libpetsc-real3.21{a} libpetsc-real3.21-dev{a} libpetsc3.21-dev-common{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libscotch-dev{a} libsharpyuv0{a} libslepc-complex-dev{a} libslepc-complex3.21{a} libslepc-complex3.21-dev{a} libslepc-real-dev{a} libslepc-real3.21{a} libslepc-real3.21-dev{a} libsm6{a} libsodium23{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsvtav1enc2{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libyaml-cpp0.8{a} libyaml-dev{a} libyuv0{a} libz3-4{a} libzmq5{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} nanobind-dev{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python-petsc4py-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-basix{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-cffi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-distlib{a} python3-docutils{a} python3-fastjsonschema{a} python3-ffcx{a} python3-filelock{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-jupytext{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-more-itertools{a} python3-mpi4py{a} python3-mpmath{a} python3-myst-parser{a} python3-nanobind{a} python3-nbformat{a} python3-numpy{a} python3-packaging{a} python3-pathspec{a} python3-petsc4py{a} python3-petsc4py-complex{a} python3-petsc4py-complex3.21{a} python3-petsc4py-real{a} python3-petsc4py-real3.21{a} python3-pil{a} python3-pil.imagetk{a} python3-pip{a} python3-pip-whl{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-ply{a} python3-pusimp{a} python3-pycparser{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-scikit-build-core{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-whl{a} python3-six{a} python3-slepc4py{a} python3-slepc4py-complex{a} python3-slepc4py-complex3.21{a} python3-slepc4py-real{a} python3-slepc4py-real3.21{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tk{a} python3-toml{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufl{a} python3-ufolib2{a} python3-urllib3{a} python3-virtualenv{a} python3-wheel{a} python3-wheel-whl{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} robin-map-dev{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} swig{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} valgrind{a} valgrind-mpi{a} x11-common{a} x11proto-dev{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation gdb isympy-common javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libpetsc3.21-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib python3-json-pointer python3-olefile python3-rfc3987 python3-uritemplate python3-webcolors shared-mime-info wget xauth xdg-user-dirs zsh 0 packages upgraded, 543 newly installed, 0 to remove and 0 not upgraded. Need to get 446 MB of archives. After unpacking 2002 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 13 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-10 [97.2 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 69 http://deb.debian.org/debian unstable/main amd64 libcatch2-dev amd64 3.7.1-0.4 [613 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 catch2 all 3.7.1-0.4 [5052 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.18-1 [13.5 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.30.5-1 [2223 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2 [699 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-2 [81.6 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.30.5-1 [11.4 MB] Get: 88 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.1-1+b1 [54.8 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-1 [26.0 MB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libclang-cpp19 amd64 1:19.1.3-1 [13.2 MB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libclang1-19 amd64 1:19.1.3-1 [7616 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b3 [5011 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB] Get: 128 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get: 130 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Get: 131 http://deb.debian.org/debian unstable/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libcdt5 amd64 2.42.4-2+b1 [40.5 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libcgraph6 amd64 2.42.4-2+b1 [64.2 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.11.0~rc1-1 [1879 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-2+b2 [350 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-7+b2 [936 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.2.1+dfsg-2 [2173 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1888.20241107-1 [172 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.3-1 [11.2 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [15.0 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.3-1 [489 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [223 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [54.2 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [35.2 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libpathplan4 amd64 2.42.4-2+b1 [42.8 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libgvc6 amd64 2.42.4-2+b1 [685 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libgvpr2 amd64 2.42.4-2+b1 [193 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 liblab-gamut1 amd64 2.42.4-2+b1 [198 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 graphviz amd64 2.42.4-2+b1 [616 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-3 [59.5 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-3 [41.7 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-3 [42.0 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-3 [53.5 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-3 [126 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libadios2-common-c++11-dev all 2.10.1+dfsg1-12 [25.3 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libadios2-common-core-dev amd64 2.10.1+dfsg1-12 [123 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-2.10 amd64 2.10.1+dfsg1-12 [402 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-dev amd64 2.10.1+dfsg1-12 [22.8 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.3-2+b1 [662 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 212 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 213 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 214 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 5.0.5-3 [2007 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 225 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-103-1t64 amd64 1.10.10+repack-4 [1312 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libpugixml1v5 amd64 1.14-2 [88.6 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-6+b2 [133 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b1 [221 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-plugins amd64 2.10.1+dfsg1-12 [14.7 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-2.10 amd64 2.10.1+dfsg1-12 [1733 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-2.10 amd64 2.10.1+dfsg1-12 [206 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-dev amd64 2.10.1+dfsg1-12 [79.3 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-dev amd64 2.10.1+dfsg1-12 [10.8 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [23.8 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.8.3+dfsg-2 [40.7 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-1.1+b2 [104 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-3+b1 [161 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-3+b1 [4990 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-1.1+b2 [119 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libbasix0.9 amd64 0.9.0-2 [409 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libbasix-dev amd64 0.9.0-2 [66.9 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-3.2 [10.6 MB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-3.2 [234 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-3.2 [235 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-3.2 [240 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-3.2 [245 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 259 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3.2 [333 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-3.2 [372 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-3.2 [239 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2 [281 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-3.2 [231 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-3.2 [297 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-3.2 [329 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-3.2 [346 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-3.2 [261 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 274 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-3.2 [523 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-3.2 [569 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 277 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-3.2 [271 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.5-3 [95.0 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.3-2+b1 [3958 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.5-3 [168 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.5-3 [1087 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.17 [3148 B] Get: 296 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-3.2 [290 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 298 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-3.2 [347 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-3.2 [375 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 301 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 302 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2 [269 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-3.2 [276 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 305 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-3.2 [235 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-3.2 [236 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 308 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b5 [316 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 libbtf2 amd64 1:7.8.3+dfsg-2 [24.7 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 libc6-dbg amd64 2.40-3 [7097 kB] Get: 311 http://deb.debian.org/debian unstable/main amd64 libcamd3 amd64 1:7.8.3+dfsg-2 [37.5 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libccolamd3 amd64 1:7.8.3+dfsg-2 [39.2 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [32.5 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 libcholmod5 amd64 1:7.8.3+dfsg-2 [638 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 libcombblas2.0.0t64 amd64 2.0.0-6 [264 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-3 [15.7 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.5.18+dfsg-3+b1 [303 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b2 [642 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.8-2 [449 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.8-2 [449 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-2+b1 [208 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.8-2 [1391 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 333 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 334 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.11.0-1 [461 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libcxsparse4 amd64 1:7.8.3+dfsg-2 [84.2 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 337 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2 [781 kB] Get: 338 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2 [347 kB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2 [617 kB] Get: 340 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2 [809 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2 [51.0 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2 [2113 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi3 amd64 3.3.10-2 [62.8 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi-dev amd64 3.3.10-2 [67.3 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libfmt-dev amd64 10.1.1+ds1-4 [177 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-102t64 amd64 1.10.10+repack-4 [90.7 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 348 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-100t64 amd64 1.10.10+repack-4 [40.7 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-103-1t64 amd64 1.10.10+repack-4 [131 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-100t64 amd64 1.10.10+repack-4 [21.4 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 1.10.10+repack-4 [2717 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 1.10.10+repack-4 [15.6 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libmetis5 amd64 5.1.0.dfsg-7+b2 [176 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libptscotch-7.0 amd64 7.0.5-1 [656 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist8 amd64 8.2.1+dfsg1-5 [610 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libhypre-2.31.0 amd64 2.31.0-3 [1710 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.0+dfsg1-2 [174 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.0+dfsg1-2 [21.9 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libhypre-dev amd64 2.31.0-3 [1974 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 libjs-modernizr all 3.13.0-0.1 [191 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libklu2 amd64 1:7.8.3+dfsg-2 [90.6 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libldl3 amd64 1:7.8.3+dfsg-2 [24.5 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get: 372 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi2.2 amd64 2.2.1-5 [1578 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libmumps-5.7 amd64 5.7.3-3 [1965 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libmumps-headers-dev all 5.7.3-3 [36.3 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi-dev amd64 2.2.1-5 [10.7 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libscalapack-mpi-dev amd64 2.2.1-5 [5888 B] Get: 377 http://deb.debian.org/debian unstable/main amd64 libmumps-dev amd64 5.7.3-3 [1861 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libparpack2t64 amd64 3.9.1-1.1+b2 [99.3 kB] Get: 380 http://deb.debian.org/debian unstable/main amd64 libparpack2-dev amd64 3.9.1-1.1+b2 [110 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libumfpack6 amd64 1:7.8.3+dfsg-2 [280 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libparu1 amd64 1:7.8.3+dfsg-2 [65.1 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libspqr4 amd64 1:7.8.3+dfsg-2 [146 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.21 amd64 3.21.6+dfsg1-2 [7277 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-mongoose3 amd64 1:7.8.3+dfsg-2 [47.3 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 librbio4 amd64 1:7.8.3+dfsg-2 [39.9 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libspex3 amd64 1:7.8.3+dfsg-2 [59.9 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-dev amd64 1:7.8.3+dfsg-2 [1476 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libscotch-7.0 amd64 7.0.5-1 [411 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 libscotch-dev amd64 7.0.5-1 [1574 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 libptscotch-dev amd64 7.0.5-1 [1375 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2024.05.08-1 [49.8 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b2 [8672 B] Get: 396 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist-dev amd64 8.2.1+dfsg1-5 [903 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.2-3+b2 [40.8 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 libyaml-dev amd64 0.2.5-1+b2 [63.5 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 libpetsc3.21-dev-common all 3.21.6+dfsg1-2 [309 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 valgrind amd64 1:3.20.0-2.1 [14.3 MB] Get: 407 http://deb.debian.org/debian unstable/main amd64 valgrind-mpi amd64 1:3.20.0-2.1 [123 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.21-dev amd64 3.21.6+dfsg1-2 [7010 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex-dev all 3.21.6+dfsg1-2 [12.5 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.21 amd64 3.21.6+dfsg1-2 [7057 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.21-dev amd64 3.21.6+dfsg1-2 [7053 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libpetsc-real-dev all 3.21.6+dfsg1-2 [12.5 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libpugixml-dev amd64 1.14-2 [109 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-3 [5124 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B] Get: 417 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B] Get: 418 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.21 amd64 3.21.2+dfsg1-2 [1252 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.21-dev amd64 3.21.2+dfsg1-2 [5707 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 libslepc-complex-dev amd64 3.21.2+dfsg1-2 [15.3 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.21 amd64 3.21.2+dfsg1-2 [1219 kB] Get: 423 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.21-dev amd64 3.21.2+dfsg1-2 [5702 kB] Get: 424 http://deb.debian.org/debian unstable/main amd64 libslepc-real-dev amd64 3.21.2+dfsg1-2 [15.3 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 libspdlog1.12 amd64 1:1.12.0+ds-2+b3 [104 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 libspdlog-dev amd64 1:1.12.0+ds-2+b3 [85.5 kB] Get: 427 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.2 [793 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 robin-map-dev all 1.3.0-1 [29.8 kB] Get: 432 http://deb.debian.org/debian unstable/main amd64 nanobind-dev all 2.2.0-1 [159 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-4 [731 kB] Get: 443 http://deb.debian.org/debian unstable/main amd64 python-petsc4py-doc all 3.21.6-2 [771 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 446 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B] Get: 449 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 python3-ufl all 2024.2.0-2 [150 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 python3-basix amd64 0.9.0-2 [132 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b5 [318 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 458 http://deb.debian.org/debian unstable/main amd64 python3-cffi-backend amd64 1.17.1-2 [87.5 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 python3-ply all 3.11-7 [62.6 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 python3-pycparser all 2.22-2 [78.0 kB] Get: 461 http://deb.debian.org/debian unstable/main amd64 python3-cffi all 1.17.1-2 [89.4 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1 [118 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2 [215 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 466 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-distlib all 0.3.9-1 [257 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 python3-filelock all 3.16.1-1 [12.6 kB] Get: 475 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 477 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get: 479 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.54.1-4 [1429 kB] Get: 485 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 487 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 488 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 python3-rpds-py amd64 0.20.1-1 [252 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 python3-referencing all 0.35.1-1 [23.5 kB] Get: 492 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 493 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 495 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 496 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 497 http://deb.debian.org/debian unstable/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get: 498 http://deb.debian.org/debian unstable/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 499 http://deb.debian.org/debian unstable/main amd64 python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 500 http://deb.debian.org/debian unstable/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 501 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-1 [134 kB] Get: 502 http://deb.debian.org/debian unstable/main amd64 python3-jupytext all 1.16.1+ds1-2 [87.2 kB] Get: 503 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2 [60.9 kB] Get: 504 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get: 505 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB] Get: 506 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-1 [103 kB] Get: 507 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get: 508 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get: 509 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 510 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get: 511 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.0.0-9 [742 kB] Get: 512 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 513 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 514 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 515 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 516 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-4 [588 kB] Get: 517 http://deb.debian.org/debian unstable/main amd64 python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 518 http://deb.debian.org/debian unstable/main amd64 python3-nanobind all 2.2.0-1 [39.4 kB] Get: 519 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 520 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Get: 521 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real3.21 amd64 3.21.6-2 [1235 kB] Get: 522 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real all 3.21.6-2 [10.5 kB] Get: 523 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex3.21 amd64 3.21.6-2 [1236 kB] Get: 524 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex all 3.21.6-2 [10.5 kB] Get: 525 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py all 3.21.6-2 [10.7 kB] Get: 526 http://deb.debian.org/debian unstable/main amd64 python3-pip all 24.3.1+dfsg-1 [1441 kB] Get: 527 http://deb.debian.org/debian unstable/main amd64 python3-pip-whl all 24.3.1+dfsg-1 [1501 kB] Get: 528 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 529 http://deb.debian.org/debian unstable/main amd64 python3-pusimp all 0.1.1-1 [10.1 kB] Get: 530 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-metadata all 0.9.0~rc1-1 [20.9 kB] Get: 531 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 532 http://deb.debian.org/debian unstable/main amd64 python3-scikit-build-core all 0.10.7-2 [123 kB] Get: 533 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-whl all 75.2.0-1 [1249 kB] Get: 534 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real3.21 amd64 3.21.2-1 [307 kB] Get: 535 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real all 3.21.2-1 [6452 B] Get: 536 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex3.21 amd64 3.21.2-1 [306 kB] Get: 537 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex all 3.21.2-1 [6520 B] Get: 538 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py all 3.21.2-1 [6644 B] Get: 539 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 540 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 541 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Get: 542 http://deb.debian.org/debian unstable/main amd64 python3-wheel-whl all 0.44.0-2 [70.1 kB] Get: 543 http://deb.debian.org/debian unstable/main amd64 python3-virtualenv all 20.27.0+ds-1 [71.1 kB] Fetched 446 MB in 20s (22.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. 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Setting up libcxsparse4:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-serialization1.83-dev:amd64 (1.83.0-3.2) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libboost-filesystem1.83-dev:amd64 (1.83.0-3.2) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libcamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libsuperlu7:amd64 (7.0.0+dfsg1-2) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-8) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.18-1+b1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-8) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:amd64 (1:1.1.2-3+b2) ... Setting up libxml2-dev:amd64 (2.12.7+dfsg+really2.9.14-0.2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:amd64 (1.83.0-3.2) ... Setting up libllvm17t64:amd64 (1:17.0.6-18) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up librbio4:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-date-time1.83-dev:amd64 (1.83.0-3.2) ... Setting up libldap-dev:amd64 (2.5.18+dfsg-3+b1) ... Setting up opencl-clhpp-headers (3.0~2024.05.08-1) ... Setting up liblapack-dev:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libfmt-dev:amd64 (10.1.1+ds1-4) ... Setting up libboost-regex1.83-dev:amd64 (1.83.0-3.2) ... Setting up pkg-config:amd64 (1.8.1-4) ... Setting up libgav1-1:amd64 (0.19.0-2+b2) ... Setting up libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.2-1+b2) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libccolamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:amd64 (2.42.4-2+b1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libbasix0.9:amd64 (0.9.0-2) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libhwloc-dev:amd64 (2.11.2-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libsuperlu-dev:amd64 (7.0.0+dfsg1-2) ... Setting up libbasix-dev:amd64 (0.9.0-2) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libfftw3-dev:amd64 (3.3.10-2) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libclang-cpp19 (1:19.1.3-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-3.2) ... Setting up libgnutls28-dev:amd64 (3.8.8-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libcholmod5:amd64 (1:7.8.3+dfsg-2) ... Setting up libxft2:amd64 (2.3.6-1+b2) ... Setting up libarpack2-dev:amd64 (3.9.1-1.1+b2) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libzmq5:amd64 (4.3.5-1+b3) ... Setting up libcurl4t64:amd64 (8.11.0-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up libspqr4:amd64 (1:7.8.3+dfsg-2) ... Setting up python3-pip-whl (24.3.1+dfsg-1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-3.2) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up nanobind-dev (2.2.0-1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-3) ... Setting up python3.12-tk (3.12.7-3) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up libspdlog-dev:amd64 (1:1.12.0+ds-2+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up doxygen (1.9.8+ds-2+b3) ... Setting up libklu2:amd64 (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:amd64 (1.21.3-3) ... Setting up libraqm0:amd64 (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:amd64 (5.0.3-2+b1) ... Setting up libumfpack6:amd64 (1:7.8.3+dfsg-2) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up cmake (3.30.5-1) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libpmix-dev:amd64 (5.0.3-2+b1) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-3) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libxmu6:amd64 (2:1.1.3-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up libkdb5-10t64:amd64 (1.21.3-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up python-petsc4py-doc (3.21.6-2) ... Setting up libibverbs-dev:amd64 (52.0-2+b1) ... Setting up libparu1:amd64 (1:7.8.3+dfsg-2) ... Setting up libpython3.12t64:amd64 (3.12.7-3) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-3) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up krb5-multidev:amd64 (1.21.3-3) ... Setting up libsuitesparse-dev:amd64 (1:7.8.3+dfsg-2) ... Setting up python3 (3.12.6-1) ... /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:amd64 (3.12.7-3) ... Setting up python3-distlib (0.3.9-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up libkrb5-dev:amd64 (1.21.3-3) ... Setting up python3-pil:amd64 (10.4.0-1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up libcurl4-openssl-dev:amd64 (8.11.0-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b5) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.7-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pip (24.3.1+dfsg-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.20.1-1) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:amd64 (5.3.0-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-pusimp (0.1.1-1) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-cffi-backend:amd64 (1.17.1-2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (24.2.0-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up python3-nanobind (2.2.0-1) ... Setting up python3-filelock (3.16.1-1) ... Setting up libpython3-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-pyproject-metadata (0.9.0~rc1-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-virtualenv (20.27.0+ds-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up libpython3-all-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.6-1) ... Setting up libopenmpi3t64:amd64 (5.0.5-3) ... Setting up libparpack2t64:amd64 (3.9.1-1.1+b2) ... Setting up libboost-mpi1.83.0 (1.83.0-3.2) ... Setting up openmpi-bin (5.0.5-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpirun.1.gz because associated file /usr/share/man/man1/mpirun.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-all-dev (3.12.6-1) ... Setting up libptscotch-7.0:amd64 (7.0.5-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-scikit-build-core (0.10.7-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-cffi (1.17.1-2) ... Setting up mpi-default-bin (1.17) ... Setting up libcombblas2.0.0t64:amd64 (2.0.0-6) ... Setting up libfftw3-mpi3:amd64 (3.3.10-2) ... Setting up python3-mpi4py (4.0.0-9) ... Setting up libhdf5-openmpi-103-1t64:amd64 (1.10.10+repack-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up libhdf5-openmpi-fortran-102t64:amd64 (1.10.10+repack-4) ... Setting up libhdf5-openmpi-cpp-103-1t64:amd64 (1.10.10+repack-4) ... Setting up python3-contourpy (1.3.0-2) ... Setting up libopenmpi-dev:amd64 (5.0.5-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up libscalapack-openmpi2.2:amd64 (2.2.1-5) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up python3-ufl (2024.2.0-2) ... Setting up libsuperlu-dist8:amd64 (8.2.1+dfsg1-5) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up libfftw3-mpi-dev:amd64 (3.3.10-2) ... Setting up libhdf5-openmpi-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libsuperlu-dist-dev:amd64 (8.2.1+dfsg1-5) ... Setting up libhdf5-openmpi-hl-fortran-100t64:amd64 (1.10.10+repack-4) ... Setting up libmumps-5.7:amd64 (5.7.3-3) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up libhypre-2.31.0:amd64 (2.31.0-3) ... Setting up libscalapack-openmpi-dev:amd64 (2.2.1-5) ... Setting up mpi-default-dev (1.17) ... Setting up libpetsc-complex3.21:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up libhdf5-openmpi-hl-cpp-100t64:amd64 (1.10.10+repack-4) ... Setting up libscalapack-mpi-dev:amd64 (2.2.1-5) ... Setting up libhdf5-openmpi-dev (1.10.10+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-basix (0.9.0-2) ... Setting up libmumps-dev:amd64 (5.7.3-3) ... Setting up libscotch-dev (7.0.5-1) ... Setting up libparpack2-dev:amd64 (3.9.1-1.1+b2) ... Setting up libpetsc-real3.21:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up python3-nbformat (5.9.1-1) ... Setting up libhypre-dev:amd64 (2.31.0-3) ... Setting up libptscotch-dev (7.0.5-1) ... Setting up python3-ffcx (1:0.9.0-2) ... Setting up libboost-mpi1.83-dev (1.83.0-3.2) ... Setting up libslepc-complex3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up python3-jupytext (1.16.1+ds1-2) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libhdf5-mpi-dev (1.10.10+repack-4) ... Setting up python3-petsc4py-complex3.21 (3.21.6-2) ... Setting up python3-slepc4py-complex3.21 (3.21.2-1) ... Setting up python3-petsc4py (3.21.6-2) ... Setting up libslepc-real3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up python3-petsc4py-real3.21 (3.21.6-2) ... Setting up python3-petsc4py-real (3.21.6-2) ... Setting up libpetsc3.21-dev-common (3.21.6+dfsg1-2) ... Setting up libpetsc-complex3.21-dev:amd64 (3.21.6+dfsg1-2) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc_complex.so (libpetsc_complex.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up python3-slepc4py-real3.21 (3.21.2-1) ... Setting up python3-petsc4py-complex (3.21.6-2) ... Setting up python3-slepc4py-complex (3.21.2-1) ... Setting up libpetsc-real3.21-dev:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up libslepc-complex3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_complex.so (libslepc_complex.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libpetsc-real-dev (3.21.6+dfsg1-2) ... Setting up libpetsc-complex-dev (3.21.6+dfsg1-2) ... Setting up python3-slepc4py (3.21.2-1) ... Setting up python3-slepc4py-real (3.21.2-1) ... Setting up libslepc-real3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libslepc-complex-dev (3.21.2+dfsg1-2) ... Setting up libslepc-real-dev (3.21.2+dfsg1-2) ... Setting up python3-fonttools (4.54.1-4) ... Setting up libadios2-mpi-plugins:amd64 (2.10.1+dfsg1-12) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up libheif-plugin-dav1d:amd64 (1.19.3-1) ... Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... Setting up python3-matplotlib (3.8.3-3) ... Setting up libadios2-mpi-core-2.10:amd64 (2.10.1+dfsg1-12) ... Setting up libheif1:amd64 (1.19.3-1) ... Setting up libadios2-mpi-c++11-2.10:amd64 (2.10.1+dfsg1-12) ... Setting up libadios2-mpi-core-dev:amd64 (2.10.1+dfsg1-12) ... Setting up libgd3:amd64 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libadios2-mpi-c++11-dev:amd64 (2.10.1+dfsg1-12) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-myst-parser (4.0.0-1) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake --with python3,sphinxdoc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex rm -rf python/build-real python/build-complex rm -rf debian/tmp-real debian/tmp-complex rm -rf python/fenics_dolfinx.egg-info rm -rf python/doc/build python/doc/source/generated rm -rf cpp/doc/latex cpp/doc/html cpp/doc/xml rm -rf /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake --with python3,sphinxdoc dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 cd obj-x86_64-linux-gnu-real && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.7") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Found PETSc version 3.21.6, prefix: /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.21.2, prefix: /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.5) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (6.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 cd obj-x86_64-linux-gnu-complex && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.7") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Found PETSc version 3.21.6, prefix: /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.21.2, prefix: /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.5) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (7.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real cd obj-x86_64-linux-gnu-real && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o [ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp [ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp [ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp [ 34%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o CMakeFiles/dolfinx.dir/common/timing.cpp.o -c 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/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp [ 72%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration 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/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o [ 88%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF 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CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o CMakeFiles/dolfinx.dir/graph/partition.cpp.o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o CMakeFiles/dolfinx.dir/io/cells.cpp.o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o CMakeFiles/dolfinx.dir/la/petsc.cpp.o CMakeFiles/dolfinx.dir/la/slepc.cpp.o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_symlink_library libdolfinx_real.so.0.9.0 libdolfinx_real.so.0.9 libdolfinx_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [100%] Built target dolfinx make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex cd obj-x86_64-linux-gnu-complex && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include 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/usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o [ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o [ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o [ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o [ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o [ 39%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp [ 44%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o [ 41%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp [ 46%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp [ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB 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cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 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/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration 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-DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/fem/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC 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/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp [ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o [ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partition.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partition.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp [ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o [ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp [ 65%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp [ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o [ 81%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp [ 86%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp [ 88%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp [ 90%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp [100%] Linking CXX shared library libdolfinx_complex.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 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/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cp COPYING.LESSER python for build in real; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ ADIOS2_ALWAYS_USE_MPI=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmpdom0b7ux/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.7") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (18.3s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmpdom0b7ux/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmpdom0b7ux/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmpdom0b7ux/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpdom0b7ux/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmpdom0b7ux/build/CMakeFiles /tmp/tmpdom0b7ux/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmpdom0b7ux/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' cd /tmp/tmpdom0b7ux/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmpdom0b7ux/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong 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[ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 23.18s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.80s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.50s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 7.64s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 7.62s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.hexahedron-Lagrange] 6.05s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_matrix_assembly_block[GhostMode.none] 5.89s call test/unit/fem/test_element_integrals.py::test_plus_minus[float32-CellType.hexahedron-DG] 5.53s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.hexahedron-DG] 5.38s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 5.36s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 5.14s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 5.06s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.triangle-DG] 4.70s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] 4.31s call test/unit/fem/test_element_integrals.py::test_plus_minus[float32-CellType.quadrilateral-Lagrange] 4.30s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Lagrange-3-4] 4.16s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.quadrilateral-DG] 4.09s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 4.08s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 4.00s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.tetrahedron-Lagrange] 3.93s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 1174.88s (0:19:34) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cp COPYING.LESSER python dh_numpy3 -a for build in complex; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmp32wku1zv/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.7") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (2.3s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmp32wku1zv/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmp32wku1zv/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmp32wku1zv/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp32wku1zv/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmp32wku1zv/build/CMakeFiles /tmp/tmp32wku1zv/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmp32wku1zv/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' cd /tmp/tmp32wku1zv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -c /usr/share/nanobind/src/nb_enum.cpp [ 20%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -c /usr/share/nanobind/src/nb_ndarray.cpp [ 25%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -c /usr/share/nanobind/src/nb_static_property.cpp [ 29%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -c /usr/share/nanobind/src/common.cpp [ 33%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -c /usr/share/nanobind/src/error.cpp [ 37%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o -c /usr/share/nanobind/src/trampoline.cpp [ 41%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -c /usr/share/nanobind/src/implicit.cpp [ 45%] Linking CXX static library libnanobind-static.a /usr/bin/cmake -P CMakeFiles/nanobind-static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' [ 45%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' cd /tmp/tmp32wku1zv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.12 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o 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CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' [100%] Built target cpp gmake[3]: Leaving directory '/tmp/tmp32wku1zv/build' /usr/bin/cmake -E cmake_progress_start /tmp/tmp32wku1zv/build/CMakeFiles 0 gmake[2]: Leaving directory '/tmp/tmp32wku1zv/build' *** Installing project into wheel... -- Install configuration: "Release" -- Installing: /tmp/tmp32wku1zv/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/tmp/tmp32wku1zv/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild base:311: cd /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build; python3.12 -m pytest --durations=20 -k "" ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 2643 items / 2 skipped test/debian-only/test_pusimp.py .sss.. [ 0%] test/unit/common/test_index_map.py ....s [ 0%] test/unit/common/test_mpi.py .. [ 0%] test/unit/common/test_public_api.py s [ 0%] test/unit/common/test_timer.py .. [ 0%] test/unit/common/test_version.py . [ 0%] test/unit/fem/test_assemble_domains.py ........... [ 1%] test/unit/fem/test_assemble_mesh_independent_form.py ........ [ 1%] test/unit/fem/test_assemble_submesh.py ................................. [ 2%] .............................................x.. [ 4%] test/unit/fem/test_assembler.py ........................................ [ 5%] .................... [ 6%] test/unit/fem/test_bcs.py .................... [ 7%] test/unit/fem/test_complex_assembler.py .... [ 7%] test/unit/fem/test_constant.py ....... [ 7%] test/unit/fem/test_custom_basix_element.py ............................. [ 8%] .............................xx..xx.. [ 10%] test/unit/fem/test_discrete_operators.py ............................... [ 11%] ........................................................................ [ 14%] ............................................. [ 15%] test/unit/fem/test_dof_coordinates.py ................ [ 16%] test/unit/fem/test_dof_permuting.py .................................... [ 17%] ........................................................................ [ 20%] ..................................ssssss [ 22%] test/unit/fem/test_dofmap.py ss.ss.ssss......... [ 22%] test/unit/fem/test_element_integrals.py ................................ [ 24%] ........................................................................ [ 26%] ........................................................................ [ 29%] ........................................................................ [ 32%] ................................ssssssssssssssss........................ [ 34%] [ 34%] test/unit/fem/test_expression.py ............................. [ 36%] test/unit/fem/test_fem_pipeline.py ...........s.................s....... [ 37%] ..........s.s.......s.............................s..................... [ 40%] .s.............................. [ 41%] test/unit/fem/test_forms.py .. [ 41%] test/unit/fem/test_function.py ............ [ 41%] test/unit/fem/test_function_space.py ............. [ 42%] test/unit/fem/test_ghost_mesh_assembly.py ..X..X [ 42%] test/unit/fem/test_interpolation.py .................................... [ 44%] ........................................................................ [ 46%] ........................................................................ [ 49%] ...s............................ [ 50%] test/unit/fem/test_mixed_element.py ...................... [ 51%] test/unit/fem/test_mixed_mesh_dofmap.py .. [ 51%] test/unit/fem/test_petsc_discrete_operators.py ......................... [ 52%] ........................................................................ [ 55%] ................ [ 55%] test/unit/fem/test_petsc_nonlinear_assembler.py ...... [ 56%] test/unit/fem/test_petsc_solver_wrappers.py .. [ 56%] test/unit/fem/test_quadrature_elements.py .............................. [ 57%] ...... [ 57%] test/unit/fem/test_special_functions.py ... [ 57%] test/unit/fem/test_symmetric_tensor.py ........ [ 57%] test/unit/fem/test_symmetry.py ......................................... [ 59%] ....................................................... [ 61%] test/unit/fem/test_vector_assemble.py .. [ 61%] test/unit/fem/test_vector_function.py .......... [ 62%] test/unit/geometry/test_bounding_box_tree.py ........................... [ 63%] ................................. [ 64%] test/unit/geometry/test_gjk.py ......................................... [ 65%] ...................... [ 66%] test/unit/graph/test_adjacencylist.py .. [ 66%] test/unit/io/test_adios2.py ............................................ [ 68%] .....ssssssss [ 68%] test/unit/io/test_vtk.py ....................... [ 69%] test/unit/io/test_xdmf_function.py ..................................... [ 71%] ...........................................s [ 72%] test/unit/io/test_xdmf_mesh.py ..........ss............................. [ 74%] ................................... [ 75%] test/unit/io/test_xdmf_meshdata.py .. [ 75%] test/unit/io/test_xdmf_meshtags.py .... [ 75%] test/unit/la/test_matrix_csr.py ............................ [ 77%] test/unit/la/test_matrix_vector.py ............xxx....xxx....xxxxxxxxxx [ 78%] test/unit/la/test_nullspace.py ................................ [ 79%] test/unit/la/test_sparsity_pattern.py . [ 79%] test/unit/la/test_vector_scatter.py ........... [ 80%] test/unit/mesh/test_cell.py ... [ 80%] test/unit/mesh/test_create_mixed_mesh.py . [ 80%] test/unit/mesh/test_dual_graph.py . [ 80%] test/unit/mesh/test_face.py s. [ 80%] test/unit/mesh/test_ghost_mesh.py X..X...X [ 80%] test/unit/mesh/test_higher_order_mesh.py ............................... [ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_discrete_operators.py: 72 warnings /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/test/unit/fem/test_discrete_operators.py:253: ComplexWarning: Casting complex values to real discards the imaginary part ux[: len(u.x.array)] = u.x.array[:] test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 16.77s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.47s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.38s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 5.32s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 4.72s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 4.40s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 4.23s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 4.17s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 4.16s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] 3.96s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] 3.90s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 3.43s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 3.42s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] 3.22s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] 3.21s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 3.12s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 3.12s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 3.06s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 2.93s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] 2.91s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 953.01s (0:15:53) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc if [ "x" != "xno" ]; then \ case " mips64el hurd-i386 m68k sh4 " in \ *\ amd64\ *) echo "ALL tests have been disabled on amd64";; \ *) set -e; \ export CTEST_OUTPUT_ON_FAILURE=1; \ for build in real complex; do \ echo "== testing $build number build =="; \ builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-${build}; \ for mytest in test demo; do \ echo "running tests from $mytest for $build build"; \ testdir=${builddir}/run_${mytest}; \ mkdir -p $testdir; \ cd $testdir; \ if [ "x" != "x" ]; then echo "set(CTEST_CUSTOM_TESTS_IGNORE )" >> CTestCustom.cmake; fi; \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} cmake -DCMAKE_MODULE_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DDOLFINX_DIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DMPIEXEC_PARAMS:STRING="--oversubscribe" \ /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/${mytest}; \ make all VERBOSE=1; \ OMPI_ALLOW_RUN_AS_ROOT=1 OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 make test VERBOSE=1; \ done; \ cd /build/reproducible-path/fenics-dolfinx-0.9.0; \ done; \ esac; \ fi == testing real number build == running tests from test for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (2.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include 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-isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/io.cpp.o -MF CMakeFiles/unittests.dir/io.cpp.o.d -o CMakeFiles/unittests.dir/io.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/io.cpp [ 35%] Building CXX object CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem 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/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sort.cpp.o -MF CMakeFiles/unittests.dir/common/sort.cpp.o.d -o CMakeFiles/unittests.dir/common/sort.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sort.cpp [ 52%] Building CXX object CMakeFiles/unittests.dir/fem/functionspace.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem 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-isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/option.cpp [ 88%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/rectangle.cpp [ 94%] Building C object CMakeFiles/unittests.dir/poisson.c.o /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 0.67 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.67 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done (2.2s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 3%] Compile biharmonic.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 7%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 11%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/biharmonic.c [ 15%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 15%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 19%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 23%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem 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-DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/mixed_codim0.c [ 30%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 30%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 34%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 38%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 38%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 42%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 46%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 50%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/poisson.c [ 53%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 53%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 57%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 61%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 65%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/poisson.c [ 69%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 69%] Built target demo_poisson_matrix_free make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 73%] Compile hyperelasticity.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 76%] Building CXX object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -MF CMakeFiles/demo_hyperelasticity.dir/main.cpp.o.d -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp [ 80%] Building C object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -MF CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o.d -o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/hyperelasticity.c [ 84%] Linking CXX executable demo_hyperelasticity cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_hyperelasticity.dir/main.cpp.o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -o demo_hyperelasticity -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 84%] Built target demo_hyperelasticity make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 88%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 92%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 92%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 96%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.51 sec Start 2: demo_biharmonic_mpi_3 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.47 sec Start 3: demo_biharmonic_serial 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.43 sec Start 4: demo_codim_0_assembly_mpi_2 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.40 sec Start 5: demo_codim_0_assembly_mpi_3 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec Start 6: demo_codim_0_assembly_serial 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec Start 7: demo_custom_kernel_mpi_2 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.95 sec Start 8: demo_custom_kernel_mpi_3 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.85 sec Start 9: demo_custom_kernel_serial 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.84 sec Start 10: demo_poisson_mpi_2 10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.43 sec Start 11: demo_poisson_mpi_3 11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.47 sec Start 12: demo_poisson_serial 12/24 Test #12: demo_poisson_serial .......................... Passed 0.33 sec Start 13: demo_poisson_matrix_free_mpi_2 13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.39 sec Start 14: demo_poisson_matrix_free_mpi_3 14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.60 sec Start 15: demo_poisson_matrix_free_serial 15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec Start 16: demo_hyperelasticity_mpi_2 16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.63 sec Start 17: demo_hyperelasticity_mpi_3 17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.67 sec Start 18: demo_hyperelasticity_serial 18/24 Test #18: demo_hyperelasticity_serial .................. Passed 1.00 sec Start 19: demo_interpolation-io_mpi_2 19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.41 sec Start 20: demo_interpolation-io_mpi_3 20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.42 sec Start 21: demo_interpolation-io_serial 21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.33 sec Start 22: demo_interpolation_different_meshes_mpi_2 22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.83 sec Start 23: demo_interpolation_different_meshes_mpi_3 23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.71 sec Start 24: demo_interpolation_different_meshes_serial 24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.80 sec 100% tests passed, 0 tests failed out of 24 Total Test time (real) = 25.54 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (2.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem 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/usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 0.67 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.67 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode -- Configuring done (2.3s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 4%] Compile biharmonic.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 9%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 13%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/biharmonic.c [ 18%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 18%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 22%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 27%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -MF CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o.d -o CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp [ 31%] Building C object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/mixed_codim0.c [ 36%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 36%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 40%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 45%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 45%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 50%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 54%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 59%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/poisson.c [ 63%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 63%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 68%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 72%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 77%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/poisson.c [ 81%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 81%] Built target demo_poisson_matrix_free make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 86%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 90%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 90%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 95%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.54 sec Start 2: demo_biharmonic_mpi_3 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.55 sec Start 3: demo_biharmonic_serial 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.52 sec Start 4: demo_codim_0_assembly_mpi_2 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.40 sec Start 5: demo_codim_0_assembly_mpi_3 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec Start 6: demo_codim_0_assembly_serial 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec Start 7: demo_custom_kernel_mpi_2 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.99 sec Start 8: demo_custom_kernel_mpi_3 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.86 sec Start 9: demo_custom_kernel_serial 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.85 sec Start 10: demo_poisson_mpi_2 10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.45 sec Start 11: demo_poisson_mpi_3 11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.42 sec Start 12: demo_poisson_serial 12/21 Test #12: demo_poisson_serial .......................... Passed 0.32 sec Start 13: demo_poisson_matrix_free_mpi_2 13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.41 sec Start 14: demo_poisson_matrix_free_mpi_3 14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.40 sec Start 15: demo_poisson_matrix_free_serial 15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec Start 16: demo_interpolation-io_mpi_2 16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.43 sec Start 17: demo_interpolation-io_mpi_3 17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.46 sec Start 18: demo_interpolation-io_serial 18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.33 sec Start 19: demo_interpolation_different_meshes_mpi_2 19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.88 sec Start 20: demo_interpolation_different_meshes_mpi_3 20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.87 sec Start 21: demo_interpolation_different_meshes_serial 21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.80 sec 100% tests passed, 0 tests failed out of 21 Total Test time (real) = 21.52 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' (cd cpp/doc; doxygen) warning: Tag 'HTML_TIMESTAMP' at line 1387 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 2055 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Reading and parsing tag files Parsing files Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... 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Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/README.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_vector_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assembler.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Constant.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dolfinx_fem.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Expression.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Form.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating file documentation... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... Generating group documentation... Generating class documentation... Generating docs for compound HyperElasticProblem... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound basix::FiniteElement... Generating docs for namespace dolfinx Generating docs for compound dolfinx::Table... Generating docs for concept dolfinx::scalar... Generating docs for namespace dolfinx::common Generating docs for compound dolfinx::common::IndexMap... Generating docs for compound dolfinx::common::Scatterer... Generating docs for compound dolfinx::common::TimeLogger... Generating docs for compound dolfinx::common::TimeLogManager... Generating docs for compound dolfinx::common::Timer... Generating docs for namespace dolfinx::fem Generating docs for compound dolfinx::fem::Constant... Generating docs for compound dolfinx::fem::CoordinateElement... Generating docs for compound dolfinx::fem::DirichletBC... Generating docs for compound dolfinx::fem::DofMap... Generating docs for compound dolfinx::fem::ElementDofLayout... Generating docs for compound dolfinx::fem::Expression... Generating docs for compound dolfinx::fem::FiniteElement... Generating docs for compound dolfinx::fem::Form... Generating docs for compound dolfinx::fem::Function... Generating docs for compound dolfinx::fem::FunctionSpace... Generating docs for compound dolfinx::fem::integral_data... Generating docs for concept dolfinx::fem::MDSpan... Generating docs for concept dolfinx::fem::DofTransformKernel... Generating docs for concept dolfinx::fem::FEkernel... Generating docs for concept dolfinx::fem::impl::FetchCells... Generating docs for namespace dolfinx::fem::petsc Generating docs for namespace dolfinx::fem::sparsitybuild Generating docs for namespace dolfinx::geometry Generating docs for compound dolfinx::geometry::BoundingBoxTree... Generating docs for compound dolfinx::geometry::PointOwnershipData... Generating docs for namespace dolfinx::graph Generating docs for compound dolfinx::graph::AdjacencyList... Generating docs for namespace dolfinx::graph::build Generating docs for namespace dolfinx::graph::kahip Generating docs for namespace dolfinx::io Generating docs for compound dolfinx::io::ADIOS2Writer... Generating docs for compound dolfinx::io::VTKFile... Generating docs for compound dolfinx::io::XDMFFile... Generating docs for namespace dolfinx::io::cells Generating docs for namespace dolfinx::io::xdmf_function Generating docs for namespace dolfinx::io::xdmf_mesh Generating docs for namespace dolfinx::la Generating docs for compound dolfinx::la::MatrixCSR... Generating docs for compound dolfinx::la::SLEPcEigenSolver... Generating docs for compound dolfinx::la::SparsityPattern... Generating docs for compound dolfinx::la::Vector... Generating docs for concept dolfinx::la::MatSet... Generating docs for namespace dolfinx::la::petsc Generating docs for compound dolfinx::la::petsc::KrylovSolver... Generating docs for compound dolfinx::la::petsc::Matrix... Generating docs for compound dolfinx::la::petsc::Operator... Generating docs for compound dolfinx::la::petsc::Vector... Generating docs for namespace dolfinx::la::petsc::options Generating docs for namespace dolfinx::mesh Generating docs for compound dolfinx::mesh::Geometry... Generating docs for compound dolfinx::mesh::Mesh... Generating docs for compound dolfinx::mesh::MeshTags... Generating docs for compound dolfinx::mesh::Topology... Generating docs for concept dolfinx::mesh::MarkerFn... Generating docs for namespace dolfinx::MPI Generating docs for compound dolfinx::MPI::Comm... Generating docs for compound dolfinx::MPI::dependent_false... Generating docs for namespace dolfinx::nls Generating docs for compound dolfinx::nls::petsc::NewtonSolver... Generating docs for namespace dolfinx::refinement Generating docs for namespace dolfinx::refinement::plaza Generating graph info page... Generating directory documentation... Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class dolfinx::io::ADIOS2Writer Generating XML output for class dolfinx::graph::AdjacencyList Generating XML output for class dolfinx::geometry::BoundingBoxTree Generating XML output for class dolfinx::MPI::Comm Generating XML output for class dolfinx::fem::Constant Generating XML output for class dolfinx::fem::CoordinateElement Generating XML output for class dolfinx::MPI::dependent_false Generating XML output for class dolfinx::fem::DirichletBC Generating XML output for class dolfinx::fem::DofMap Generating XML output for class dolfinx::fem::ElementDofLayout Generating XML output for class dolfinx::fem::Expression Generating XML output for class dolfinx::io::FidesWriter Generating XML output for class basix::FiniteElement Generating XML output for class dolfinx::fem::FiniteElement Generating XML output for class dolfinx::fem::Form Generating XML output for class dolfinx::fem::Function Generating XML output for class dolfinx::fem::FunctionSpace Generating XML output for class dolfinx::mesh::Geometry Generating XML output for class HyperElasticProblem Generating XML output for class dolfinx::common::IndexMap Generating XML output for class dolfinx::fem::integral_data Generating XML output for class dolfinx::la::petsc::KrylovSolver Generating XML output for class dolfinx::la::petsc::Matrix Generating XML output for class dolfinx::la::MatrixCSR Generating XML output for class dolfinx::mesh::Mesh Generating XML output for class dolfinx::mesh::MeshTags Generating XML output for class dolfinx::nls::petsc::NewtonSolver Generating XML output for class dolfinx::la::petsc::Operator Generating XML output for class dolfinx::geometry::PointOwnershipData Generating XML output for class dolfinx::scalar_value_type Generating XML output for class dolfinx::scalar_value_type< T, std::void_t< typename T::value_type > > Generating XML output for class dolfinx::common::Scatterer Generating XML output for class dolfinx::la::SLEPcEigenSolver Generating XML output for class dolfinx::la::SparsityPattern Generating XML output for class dolfinx::Table Generating XML output for class dolfinx::common::TimeLogger Generating XML output for class dolfinx::common::TimeLogManager Generating XML output for class dolfinx::common::Timer Generating XML output for class dolfinx::mesh::Topology Generating XML output for class dolfinx::la::petsc::Vector Generating XML output for class dolfinx::la::Vector Generating XML output for class dolfinx::io::VTKFile Generating XML output for class dolfinx::io::VTXWriter Generating XML output for class dolfinx::io::XDMFFile Generating XML output for concept dolfinx::fem::DofTransformKernel Generating XML output for concept dolfinx::fem::FEkernel Generating XML output for concept dolfinx::fem::impl::FetchCells Generating XML output for concept dolfinx::fem::MDSpan Generating XML output for concept dolfinx::la::MatSet Generating XML output for concept dolfinx::mesh::MarkerFn Generating XML output for concept dolfinx::scalar Generating XML output for namespace @104 Generating XML output for namespace @108 Generating XML output for namespace @110 Generating XML output for namespace @112 Generating XML output for namespace @117 Generating XML output for namespace @122 Generating XML output for namespace @13 Generating XML output for namespace @33 Generating XML output for namespace @36 Generating XML output for namespace @38 Generating XML output for namespace @4 Generating XML output for namespace @44 Generating XML output for namespace @63 Generating XML output for namespace @67 Generating XML output for namespace @69 Generating XML output for namespace @71 Generating XML output for namespace @74 Generating XML output for namespace @78 Generating XML output for namespace @80 Generating XML output for namespace @84 Generating XML output for namespace basix Generating XML output for namespace biharmonic Generating XML output for namespace dolfinx Generating XML output for namespace dolfinx::common Generating XML output for namespace dolfinx::fem Generating XML output for namespace dolfinx::fem::impl Generating XML output for namespace dolfinx::fem::petsc Generating XML output for namespace dolfinx::fem::sparsitybuild Generating XML output for namespace dolfinx::geometry Generating XML output for namespace dolfinx::geometry::impl Generating XML output for namespace dolfinx::geometry::impl_bb Generating XML output for namespace dolfinx::geometry::impl_gjk Generating XML output for namespace dolfinx::graph Generating XML output for namespace dolfinx::graph::build Generating XML output for namespace dolfinx::graph::kahip Generating XML output for namespace dolfinx::graph::parmetis Generating XML output for namespace dolfinx::graph::scotch Generating XML output for namespace dolfinx::io Generating XML output for namespace dolfinx::io::adios2_writer Generating XML output for namespace dolfinx::io::cells Generating XML output for namespace dolfinx::io::hdf5 Generating XML output for namespace dolfinx::io::impl Generating XML output for namespace dolfinx::io::impl_adios2 Generating XML output for namespace dolfinx::io::impl_fides Generating XML output for namespace dolfinx::io::impl_vtx Generating XML output for namespace dolfinx::io::xdmf_function Generating XML output for namespace dolfinx::io::xdmf_mesh Generating XML output for namespace dolfinx::io::xdmf_utils Generating XML output for namespace dolfinx::la Generating XML output for namespace dolfinx::la::impl Generating XML output for namespace dolfinx::la::petsc Generating XML output for namespace dolfinx::la::petsc::options Generating XML output for namespace dolfinx::math Generating XML output for namespace dolfinx::mesh Generating XML output for namespace dolfinx::mesh::impl Generating XML output for namespace dolfinx::MPI Generating XML output for namespace dolfinx::nls Generating XML output for namespace dolfinx::nls::petsc Generating XML output for namespace dolfinx::refinement Generating XML output for namespace dolfinx::refinement::impl Generating XML output for namespace dolfinx::refinement::interval Generating XML output for namespace dolfinx::refinement::plaza Generating XML output for namespace dolfinx::refinement::plaza::impl Generating XML output for namespace hyperelasticity Generating XML output for namespace linalg Generating XML output for namespace mixed_codim0 Generating XML output for namespace poisson Generating XML output for namespace pugi Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py Generating XML output for file hyperelasticity.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md Generating XML output for file defines.cpp Generating XML output for file defines.h Generating XML output for file dolfinx_common.h Generating XML output for file dolfinx_doc.h Generating XML output for file IndexMap.cpp Generating XML output for file IndexMap.h Generating XML output for file log.cpp Generating XML output for file log.h Generating XML output for file math.h Generating XML output for file MPI.cpp Generating XML output for file MPI.h Generating XML output for file Scatterer.h Generating XML output for file sort.h Generating XML output for file Table.cpp Generating XML output for file Table.h Generating XML output for file TimeLogger.cpp Generating XML output for file TimeLogger.h Generating XML output for file TimeLogManager.cpp Generating XML output for file TimeLogManager.h Generating XML output for file Timer.cpp Generating XML output for file Timer.h Generating XML output for file timing.cpp Generating XML output for file timing.h Generating XML output for file types.h Generating XML output for file dolfinx.h Generating XML output for file assemble_matrix_impl.h Generating XML output for file assemble_scalar_impl.h Generating XML output for file assemble_vector_impl.h Generating XML output for file assembler.h Generating XML output for file Constant.h Generating XML output for file CoordinateElement.cpp Generating XML output for file CoordinateElement.h Generating XML output for file DirichletBC.cpp Generating XML output for file DirichletBC.h Generating XML output for file discreteoperators.h Generating XML output for file DofMap.cpp Generating XML output for file DofMap.h Generating XML output for file dofmapbuilder.cpp Generating XML output for file dofmapbuilder.h Generating XML output for file dolfinx_fem.h Generating XML output for file ElementDofLayout.cpp Generating XML output for file ElementDofLayout.h Generating XML output for file Expression.h Generating XML output for file FiniteElement.cpp Generating XML output for file FiniteElement.h Generating XML output for file Form.h Generating XML output for file Function.h Generating XML output for file FunctionSpace.h Generating XML output for file interpolate.h Generating XML output for file petsc.cpp Generating XML output for file petsc.cpp Generating XML output for file petsc.h Generating XML output for file petsc.h Generating XML output for file sparsitybuild.cpp Generating XML output for file sparsitybuild.h Generating XML output for file traits.h Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h Generating XML output for file AdjacencyList.h Generating XML output for file dolfinx_graph.h Generating XML output for file ordering.cpp Generating XML output for file ordering.h Generating XML output for file partition.cpp Generating XML output for file partition.h Generating XML output for file partitioners.cpp Generating XML output for file partitioners.h Generating XML output for file ADIOS2Writers.cpp Generating XML output for file ADIOS2Writers.h Generating XML output for file cells.cpp Generating XML output for file cells.h Generating XML output for file dolfinx_io.h Generating XML output for file HDF5Interface.cpp Generating XML output for file HDF5Interface.h Generating XML output for file vtk_utils.cpp Generating XML output for file vtk_utils.h Generating XML output for file VTKFile.cpp Generating XML output for file VTKFile.h Generating XML output for file xdmf_function.cpp Generating XML output for file xdmf_function.h Generating XML output for file xdmf_mesh.cpp Generating XML output for file xdmf_mesh.h Generating XML output for file xdmf_utils.cpp Generating XML output for file xdmf_utils.h Generating XML output for file XDMFFile.cpp Generating XML output for file XDMFFile.h Generating XML output for file dolfinx_la.h Generating XML output for file matrix_csr_impl.h Generating XML output for file MatrixCSR.h Generating XML output for file slepc.cpp Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp Generating XML output for file SparsityPattern.h Generating XML output for file Vector.h Generating XML output for file cell_types.cpp Generating XML output for file cell_types.h Generating XML output for file dolfinx_mesh.h Generating XML output for file generation.h Generating XML output for file Geometry.h Generating XML output for file graphbuild.cpp Generating XML output for file graphbuild.h Generating XML output for file Mesh.h Generating XML output for file MeshTags.h Generating XML output for file permutationcomputation.cpp Generating XML output for file permutationcomputation.h Generating XML output for file Topology.cpp Generating XML output for file Topology.h Generating XML output for file topologycomputation.cpp Generating XML output for file topologycomputation.h Generating XML output for file dolfinx_nls.h Generating XML output for file NewtonSolver.cpp Generating XML output for file NewtonSolver.h Generating XML output for file dolfinx_refinement.h Generating XML output for file interval.h Generating XML output for file option.h Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/ Generating XML output for the main page Running plantuml with JAVA... Running dot... Generating dot graphs using 43 parallel threads... 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(cd python/doc; \ mkdir -p build/pkgconfig; \ cp /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc build/pkgconfig; \ sed "s|prefix=/usr|prefix=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr|" -i build/pkgconfig/dolfinx_real.pc; \ PYTHONPATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/python3.12/dist-packages \ PKG_CONFIG_PATH=`pwd`/build/pkgconfig:${PKG_CONFIG_PATH} \ LD_LIBRARY_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/:${LD_LIBRARY_PATH} \ XDG_CACHE_HOME=`pwd`/build \ RDMAV_FORK_SAFE=1 \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v7.4.7 Matplotlib created a temporary cache directory at /tmp/matplotlib-smab86t2 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. TNT degree 2 error: 0.0029421918345155706 TNT degree 2 error: 0.00017118942553986645 TNT degree 3 error: 8.385106828741018e-06 TNT degree 4 error: 3.3949902024131903e-07 TNT degree 5 error: 1.2528243192173552e-08 TNT degree 6 error: 4.2427763620456416e-10 TNT degree 7 error: 1.9821407338629663e-10 TNT degree 8 error: 2.9565584931620583e-10 Q degree 1 error: 0.04076382001057708 Q degree 2 error: 0.002918221339526902 Q degree 3 error: 0.00015944660110819777 Q degree 4 error: 7.937421445106529e-06 Q degree 5 error: 3.1034668624612296e-07 Q degree 6 error: 1.1356498984352308e-08 Q degree 7 error: 3.416145918786947e-10 Q degree 8 error: 6.190884454572778e-11 Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 loading translations [en]... done making output directory... done [autosummary] generating autosummary for: api.rst, contributing.rst, demos.rst, demos/demo_axis.md, demos/demo_biharmonic.md, demos/demo_cahn-hilliard.md, demos/demo_elasticity.md, demos/demo_gmsh.md, demos/demo_half_loaded_waveguide.md, demos/demo_hdg.md, ..., demos/demo_pyvista.md, demos/demo_scattering_boundary_conditions.md, demos/demo_static-condensation.md, demos/demo_stokes.md, demos/demo_tnt-elements.md, demos/demo_types.md, developer.rst, index.rst, installation.rst, styleguide_cpp.rst [autosummary] generating autosummary for: /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.log.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.mesh.rst, ..., /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.gmshio.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.jit.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.mesh.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.nls.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.pkgconfig.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.plot.rst myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'dollarmath'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 29 source files that are out of date updating environment: [new config] 54 added, 0 changed, 0 removed reading sources... [ 2%] api reading sources... [ 4%] contributing reading sources... [ 6%] demos reading sources... [ 7%] demos/demo_axis reading sources... [ 9%] demos/demo_biharmonic reading sources... [ 11%] demos/demo_cahn-hilliard reading sources... [ 13%] demos/demo_elasticity reading sources... [ 15%] demos/demo_gmsh reading sources... [ 17%] demos/demo_half_loaded_waveguide reading sources... [ 19%] demos/demo_hdg reading sources... [ 20%] demos/demo_helmholtz reading sources... [ 22%] demos/demo_interpolation-io reading sources... [ 24%] demos/demo_lagrange_variants reading sources... [ 26%] demos/demo_mixed-poisson reading sources... [ 28%] demos/demo_navier-stokes reading sources... [ 30%] demos/demo_pml reading sources... [ 31%] demos/demo_poisson reading sources... [ 33%] demos/demo_poisson_matrix_free reading sources... [ 35%] demos/demo_pyamg reading sources... [ 37%] demos/demo_pyvista reading sources... [ 39%] demos/demo_scattering_boundary_conditions reading sources... [ 41%] demos/demo_static-condensation reading sources... [ 43%] demos/demo_stokes reading sources... [ 44%] demos/demo_tnt-elements reading sources... [ 46%] demos/demo_types reading sources... [ 48%] developer reading sources... [ 50%] generated/dolfinx.common reading sources... [ 52%] generated/dolfinx.cpp.common reading sources... [ 54%] generated/dolfinx.cpp.fem reading sources... [ 56%] generated/dolfinx.cpp.fem.petsc reading sources... [ 57%] generated/dolfinx.cpp.geometry reading sources... [ 59%] generated/dolfinx.cpp.graph reading sources... [ 61%] generated/dolfinx.cpp.io reading sources... [ 63%] generated/dolfinx.cpp.la reading sources... [ 65%] generated/dolfinx.cpp.log reading sources... [ 67%] generated/dolfinx.cpp.mesh reading sources... [ 69%] generated/dolfinx.cpp.nls reading sources... [ 70%] generated/dolfinx.cpp.nls.petsc reading sources... [ 72%] generated/dolfinx.cpp.refinement reading sources... [ 74%] generated/dolfinx.fem reading sources... 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[100%] styleguide_cpp looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_axis.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_axis /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_biharmonic.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_cahn-hilliard.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_cahn-hilliard /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_elasticity.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_elasticity /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_gmsh.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_gmsh /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_half_loaded_waveguide.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_half_loaded_waveguide /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_hdg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_hdg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_helmholtz.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_helmholtz /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_interpolation-io.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_lagrange_variants.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_lagrange_variants /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_mixed-poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_mixed-poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_navier-stokes.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_navier-stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pml.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pml /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyamg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyamg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyvista.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyvista /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_scattering_boundary_conditions.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_scattering_boundary_conditions /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_static-condensation.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_static-condensation /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_stokes.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_tnt-elements.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_tnt-elements /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_types.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_types done preparing documents... done copying assets... copying downloadable files... [ 6%] demos/demo_biharmonic.py copying downloadable files... [ 12%] demos/demo_cahn-hilliard.py copying downloadable files... [ 18%] demos/demo_elasticity.py copying downloadable files... [ 24%] demos/demo_gmsh.py copying downloadable files... [ 29%] demos/demo_hdg.py copying downloadable files... [ 35%] demos/demo_interpolation-io.py copying downloadable files... [ 41%] demos/demo_lagrange_variants.py copying downloadable files... [ 47%] demos/demo_mixed-poisson.py copying downloadable files... [ 53%] demos/demo_mixed-poisson.ipynb copying downloadable files... [ 59%] demos/demo_navier-stokes.py copying downloadable files... [ 65%] demos/demo_poisson.py copying downloadable files... [ 71%] demos/demo_poisson_matrix_free.py copying downloadable files... [ 76%] demos/demo_poisson_matrix_free.ipynb copying downloadable files... [ 82%] demos/demo_pyamg.py copying downloadable files... [ 88%] demos/demo_stokes.py copying downloadable files... [ 94%] demos/demo_tnt-elements.py copying downloadable files... [100%] demos/demo_types.py copying static files... done copying extra files... done copying assets: done writing output... [ 2%] api writing output... [ 4%] contributing writing output... [ 6%] demos writing output... [ 7%] demos/demo_axis writing output... [ 9%] demos/demo_biharmonic writing output... [ 11%] demos/demo_cahn-hilliard writing output... [ 13%] demos/demo_elasticity writing output... [ 15%] demos/demo_gmsh writing output... [ 17%] demos/demo_half_loaded_waveguide writing output... [ 19%] demos/demo_hdg writing output... [ 20%] demos/demo_helmholtz writing output... [ 22%] demos/demo_interpolation-io writing output... [ 24%] demos/demo_lagrange_variants writing output... [ 26%] demos/demo_mixed-poisson writing output... [ 28%] demos/demo_navier-stokes writing output... [ 30%] demos/demo_pml writing output... [ 31%] demos/demo_poisson writing output... [ 33%] demos/demo_poisson_matrix_free writing output... 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[ 70%] generated/dolfinx.cpp.nls.petsc writing output... [ 72%] generated/dolfinx.cpp.refinement writing output... [ 74%] generated/dolfinx.fem writing output... [ 76%] generated/dolfinx.fem.petsc writing output... [ 78%] generated/dolfinx.geometry writing output... [ 80%] generated/dolfinx.graph writing output... [ 81%] generated/dolfinx.io writing output... [ 83%] generated/dolfinx.io.gmshio writing output... [ 85%] generated/dolfinx.jit writing output... [ 87%] generated/dolfinx.la writing output... [ 89%] generated/dolfinx.mesh writing output... [ 91%] generated/dolfinx.nls.petsc writing output... [ 93%] generated/dolfinx.pkgconfig writing output... [ 94%] generated/dolfinx.plot writing output... [ 96%] index writing output... [ 98%] installation writing output... [100%] styleguide_cpp generating indices... genindex py-modindex done highlighting module code... [ 3%] dolfinx.common highlighting module code... [ 7%] dolfinx.cpp.common highlighting module code... [ 10%] dolfinx.cpp.fem highlighting module code... [ 14%] dolfinx.cpp.geometry highlighting module code... [ 17%] dolfinx.cpp.graph highlighting module code... [ 21%] dolfinx.cpp.io highlighting module code... [ 24%] dolfinx.cpp.la highlighting module code... [ 28%] dolfinx.cpp.log highlighting module code... [ 31%] dolfinx.cpp.mesh highlighting module code... [ 34%] dolfinx.cpp.nls.petsc highlighting module code... [ 38%] dolfinx.cpp.refinement highlighting module code... [ 41%] dolfinx.fem highlighting module code... [ 45%] dolfinx.fem.assemble highlighting module code... [ 48%] dolfinx.fem.bcs highlighting module code... [ 52%] dolfinx.fem.dofmap highlighting module code... [ 55%] dolfinx.fem.element highlighting module code... [ 59%] dolfinx.fem.forms highlighting module code... [ 62%] dolfinx.fem.function highlighting module code... [ 66%] dolfinx.fem.petsc highlighting module code... [ 69%] dolfinx.geometry highlighting module code... [ 72%] dolfinx.graph highlighting module code... [ 76%] dolfinx.io.gmshio highlighting module code... [ 79%] dolfinx.io.utils highlighting module code... [ 83%] dolfinx.jit highlighting module code... [ 86%] dolfinx.la highlighting module code... [ 90%] dolfinx.mesh highlighting module code... [ 93%] dolfinx.nls.petsc highlighting module code... [ 97%] dolfinx.pkgconfig highlighting module code... [100%] dolfinx.plot writing additional pages... search done copying images... [ 17%] demos/demo_lagrange_variants_equispaced_10.png copying images... [ 33%] demos/demo_lagrange_variants_gll_10.png copying images... [ 50%] demos/demo_lagrange_variants_interpolation_equispaced.png copying images... [ 67%] demos/demo_lagrange_variants_interpolation_gll_warped.png copying images... [ 83%] demos/demo_tnt-elements_degrees_vs_error.png copying images... [100%] demos/demo_tnt-elements_ndofs_vs_error.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in .pybuild/html. dh_numpy3 -i make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -a sed "s/set(CMAKE_IMPORT_FILE_VERSION 1)/set(CMAKE_IMPORT_FILE_VERSION 1)\n\nif(PETSC_SCALAR_COMPLEX)\n set(LIB_NAME_EXT \"_complex\")\nelse()\n set(LIB_NAME_EXT \"_real\")\nendif()/; \ s/libdolfinx_real.so/libdolfinx\${LIB_NAME_EXT}.so/g" \ -i debian/libdolfinx-dev/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex dh_installdocs -O--buildsystem=cmake dh_installdocs: warning: Cannot auto-detect main package for dolfinx-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -a dh_numpy3 -a mkdir -p debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib mv debian/python3-dolfinx-real/usr/lib/python3 debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib rm -rf debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfinx_utils mkdir -p debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib mv debian/python3-dolfinx-complex/usr/lib/python3 debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib rm -rf debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/dolfinx_utils make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex E: dh_python3 dh_python3:198: no package to act on (python3-foo or one with ${python3:Depends} in Depends) dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_compress -X.py -X.cpp -X.h -X.pdf -X.ufl make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_dwz -Xcpp.cpython make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_strip make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_strip --package=libdolfinx-real0.9 -Xcomplex -Xpython dh_strip --package=libdolfinx-complex0.9 -Xreal -Xpython dh_strip --package=python3-dolfinx-real make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' echo "python3-petsc4py-real:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/python3-dolfinx-real.substvars echo "python3-petsc4py-complex:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-complex (>= 3.21), python3-petsc4py-complex (<< 3.22), python3-slepc4py-complex (>= 3.21), python3-slepc4py-complex (<< 3.22)" >> debian/python3-dolfinx-complex.substvars echo "python-petsc4py-alt:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/libdolfinx-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.21-dev, libslepc-real3.21-dev" -Vpetsc-complex:Depends="libpetsc-complex3.21-dev, libslepc-complex3.21-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ \ -Vnanobind:Upstream-Version=2.2 -Vnanobind:Next-Upstream-Version=3 dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-2_amd64.deb'. dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/500505 and its subdirectories I: Current time: Sun Dec 14 23:03:22 -12 2025 I: pbuilder-time-stamp: 1765796602 Mon Dec 15 11:03:23 UTC 2025 I: Signing ./b1/fenics-dolfinx_0.9.0-2_amd64.buildinfo as fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc Mon Dec 15 11:03:23 UTC 2025 I: Signed ./b1/fenics-dolfinx_0.9.0-2_amd64.buildinfo as ./b1/fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc Mon Dec 15 11:03:23 UTC 2025 - build #1 for fenics-dolfinx/unstable/amd64 on ionos5-amd64 done. Starting cleanup. All cleanup done. Mon Dec 15 11:03:23 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-ebsjGCMm, removing. /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl: total 24 drwxr-xr-x 2 jenkins jenkins 4096 Nov 12 04:40 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 12 03:21 b2 -rw-r--r-- 1 jenkins jenkins 4211 Nov 10 08:59 fenics-dolfinx_0.9.0-2.dsc -rw------- 1 jenkins jenkins 5362 Nov 12 03:21 rbuildlog.dmofCNI /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1: total 28460 -rw-r--r-- 1 jenkins jenkins 739276 Nov 12 04:40 build.log -rw-r--r-- 1 jenkins jenkins 1237608 Nov 12 04:40 dolfinx-doc_0.9.0-2_all.deb -rw-r--r-- 1 jenkins jenkins 44840 Nov 12 04:40 fenics-dolfinx_0.9.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 4211 Nov 12 04:40 fenics-dolfinx_0.9.0-2.dsc -rw-r--r-- 1 jenkins jenkins 25323 Nov 12 04:40 fenics-dolfinx_0.9.0-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 26205 Nov 12 04:40 fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 4797 Nov 12 04:40 fenics-dolfinx_0.9.0-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1265 Nov 12 04:40 fenics-dolfinx_0.9.0-2_source.changes -rw-r--r-- 1 jenkins jenkins 48080 Nov 12 04:40 libdolfinx-complex-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 11431248 Nov 12 04:40 libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 575596 Nov 12 04:40 libdolfinx-complex0.9_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 201104 Nov 12 04:40 libdolfinx-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 48072 Nov 12 04:40 libdolfinx-real-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 11428888 Nov 12 04:40 libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 575652 Nov 12 04:40 libdolfinx-real0.9_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1328144 Nov 12 04:40 python3-dolfinx-complex_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1328024 Nov 12 04:40 python3-dolfinx-real_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 49412 Nov 12 04:40 python3-dolfinx_0.9.0-2_amd64.deb /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2: total 0 Tue Nov 12 04:40:24 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Dec 14 21:44:37 -12 2025 I: pbuilder-time-stamp: 1765791877 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenics-dolfinx_0.9.0-2.dsc] I: copying [./fenics-dolfinx_0.9.0.orig.tar.gz] I: copying [./fenics-dolfinx_0.9.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Nov 10 08:47:12 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenics-dolfinx_0.9.0-2.dsc: no acceptable signature found dpkg-source: info: extracting fenics-dolfinx in fenics-dolfinx-0.9.0 dpkg-source: info: unpacking fenics-dolfinx_0.9.0.orig.tar.gz dpkg-source: info: unpacking fenics-dolfinx_0.9.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying extra_CXXFLAGS.patch dpkg-source: info: applying python_cmake_module_path.patch dpkg-source: info: applying lib_rename.patch dpkg-source: info: applying python_unit_test_32bit.patch dpkg-source: info: applying docs_local_mathjax.patch dpkg-source: info: applying debian_version_id.patch dpkg-source: info: applying demo_no_vtk_adios2.patch dpkg-source: info: applying adios_config_mpi.patch dpkg-source: info: applying big_endian_skip_adios2_tests.patch dpkg-source: info: applying python_local_license.patch dpkg-source: info: applying pusimp.patch dpkg-source: info: applying drop_Werror.patch dpkg-source: info: applying demo_stokes_mumps_instead_of_superlu_dist.patch dpkg-source: info: applying test_adios2_skip.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/500505/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='65ca1a013bcc482d9ad70d68a25fe160' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='500505' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_Eds6 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1 --logfile b1/build.log fenics-dolfinx_0.9.0-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/500505/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), dh-python, gfortran, catch2 (>= 3~), chrpath, libbasix-dev (>= 0.9.0~), python3-basix, libboost-chrono-dev, libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev, libhdf5-mpi-dev, libadios2-mpi-c++11-dev, libpugixml-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, libpetsc-real-dev, libpetsc-complex-dev, libslepc-real-dev, libslepc-complex-dev, python3-setuptools, pybuild-plugin-pyproject, python3-petsc4py, python3-petsc4py-real, python3-petsc4py-complex, python3-slepc4py, python3-slepc4py-real, python3-slepc4py-complex, pkgconf, python3-all-dev, python3-cffi, python3-pkg-resources, python3-ffcx (>= 1:0.9.0~), python3-ffcx (<< 1:0.10.0), python3-ufl (>= 2024.2.0~), python3-mpi4py, python3-nanobind (>= 2.0.0~), python3-numpy (>= 1:1.21~), python3-pip, python3-ply, python3-pytest, python3-pusimp (>= 0.1.1~), python3-requests, python3-scikit-build-core, python3-scipy, python3-sphinx, python3-virtualenv, libspdlog-dev, doxygen, graphviz, libjs-mathjax, libjs-modernizr, python3-jupytext, python3-matplotlib, python3-myst-parser, python3-sphinx-rtd-theme dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on catch2 (>= 3~); however: Package catch2 is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on libbasix-dev (>= 0.9.0~); however: Package libbasix-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-basix; however: Package python3-basix is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono-dev; however: Package libboost-chrono-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-mpi-dev; however: Package libboost-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libadios2-mpi-c++11-dev; however: Package libadios2-mpi-c++11-dev is not installed. pbuilder-satisfydepends-dummy depends on libpugixml-dev; however: Package libpugixml-dev is not installed. pbuilder-satisfydepends-dummy depends on libsuitesparse-dev; however: Package libsuitesparse-dev is not installed. pbuilder-satisfydepends-dummy depends on libscotch-dev; however: Package libscotch-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-real-dev; however: Package libpetsc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-complex-dev; however: Package libpetsc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-real-dev; however: Package libslepc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-complex-dev; however: Package libslepc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py; however: Package python3-petsc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-real; however: Package python3-petsc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-complex; however: Package python3-petsc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py; however: Package python3-slepc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-real; however: Package python3-slepc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-complex; however: Package python3-slepc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-cffi; however: Package python3-cffi is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (>= 1:0.9.0~); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (<< 1:0.10.0); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ufl (>= 2024.2.0~); however: Package python3-ufl is not installed. pbuilder-satisfydepends-dummy depends on python3-mpi4py; however: Package python3-mpi4py is not installed. pbuilder-satisfydepends-dummy depends on python3-nanobind (>= 2.0.0~); however: Package python3-nanobind is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1:1.21~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-ply; however: Package python3-ply is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pusimp (>= 0.1.1~); however: Package python3-pusimp is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-scikit-build-core; however: Package python3-scikit-build-core is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-virtualenv; however: Package python3-virtualenv is not installed. pbuilder-satisfydepends-dummy depends on libspdlog-dev; however: Package libspdlog-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on libjs-modernizr; however: Package libjs-modernizr is not installed. pbuilder-satisfydepends-dummy depends on python3-jupytext; however: Package python3-jupytext is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} catch2{a} chrpath{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} graphviz{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libabsl20230802{a} libadios2-common-c++11-dev{a} libadios2-common-core-dev{a} libadios2-mpi-auxiliary-2.10{a} libadios2-mpi-auxiliary-dev{a} libadios2-mpi-c++11-2.10{a} libadios2-mpi-c++11-dev{a} libadios2-mpi-core-2.10{a} libadios2-mpi-core-dev{a} libadios2-mpi-plugins{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamd3{a} libamdhip64-5{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libavif16{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcairo2{a} libcamd3{a} libcatch2-dev{a} libcbor0.10{a} libccolamd3{a} libcdt5{a} libcgraph6{a} libcholmod5{a} libclang-cpp19{a} libclang1-19{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfmt-dev{a} libfmt10{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1t64{a} libhdf5-openmpi-cpp-103-1t64{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102t64{a} libhdf5-openmpi-hl-100t64{a} libhdf5-openmpi-hl-cpp-100t64{a} libhdf5-openmpi-hl-fortran-100t64{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.31.0{a} libhypre-dev{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libimagequant0{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-modernizr{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libmunge2{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenjp2-7{a} libopenmpi-dev{a} libopenmpi3t64{a} libp11-kit-dev{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpathplan4{a} libpciaccess0{a} libpetsc-complex-dev{a} libpetsc-complex3.21{a} libpetsc-complex3.21-dev{a} libpetsc-real-dev{a} libpetsc-real3.21{a} libpetsc-real3.21-dev{a} libpetsc3.21-dev-common{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libscotch-dev{a} libsharpyuv0{a} libslepc-complex-dev{a} libslepc-complex3.21{a} libslepc-complex3.21-dev{a} libslepc-real-dev{a} libslepc-real3.21{a} libslepc-real3.21-dev{a} libsm6{a} libsodium23{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsvtav1enc2{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libyaml-cpp0.8{a} libyaml-dev{a} libyuv0{a} libz3-4{a} libzmq5{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} nanobind-dev{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python-petsc4py-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-basix{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-cffi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-distlib{a} python3-docutils{a} python3-fastjsonschema{a} python3-ffcx{a} python3-filelock{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-jupytext{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-more-itertools{a} python3-mpi4py{a} python3-mpmath{a} python3-myst-parser{a} python3-nanobind{a} python3-nbformat{a} python3-numpy{a} python3-packaging{a} python3-pathspec{a} python3-petsc4py{a} python3-petsc4py-complex{a} python3-petsc4py-complex3.21{a} python3-petsc4py-real{a} python3-petsc4py-real3.21{a} python3-pil{a} python3-pil.imagetk{a} python3-pip{a} python3-pip-whl{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-ply{a} python3-pusimp{a} python3-pycparser{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-scikit-build-core{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-whl{a} python3-six{a} python3-slepc4py{a} python3-slepc4py-complex{a} python3-slepc4py-complex3.21{a} python3-slepc4py-real{a} python3-slepc4py-real3.21{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tk{a} python3-toml{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufl{a} python3-ufolib2{a} python3-urllib3{a} python3-virtualenv{a} python3-wheel{a} python3-wheel-whl{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} robin-map-dev{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} swig{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} valgrind{a} valgrind-mpi{a} x11-common{a} x11proto-dev{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation gdb isympy-common javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libpetsc3.21-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib python3-json-pointer python3-olefile python3-rfc3987 python3-uritemplate python3-webcolors shared-mime-info wget xauth xdg-user-dirs zsh 0 packages upgraded, 543 newly installed, 0 to remove and 0 not upgraded. Need to get 446 MB of archives. After unpacking 2002 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 13 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-10 [97.2 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 69 http://deb.debian.org/debian unstable/main amd64 libcatch2-dev amd64 3.7.1-0.4 [613 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 catch2 all 3.7.1-0.4 [5052 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.18-1 [13.5 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.30.5-1 [2223 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2 [699 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-2 [81.6 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.30.5-1 [11.4 MB] Get: 88 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.1-1+b1 [54.8 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-1 [26.0 MB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libclang-cpp19 amd64 1:19.1.3-1 [13.2 MB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libclang1-19 amd64 1:19.1.3-1 [7616 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b3 [5011 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB] Get: 128 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get: 130 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Get: 131 http://deb.debian.org/debian unstable/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libcdt5 amd64 2.42.4-2+b1 [40.5 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libcgraph6 amd64 2.42.4-2+b1 [64.2 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.11.0~rc1-1 [1879 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-2+b2 [350 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-7+b2 [936 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.2.1+dfsg-2 [2173 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1888.20241107-1 [172 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.3-1 [11.2 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [15.0 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.3-1 [489 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [223 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [54.2 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [35.2 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libpathplan4 amd64 2.42.4-2+b1 [42.8 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libgvc6 amd64 2.42.4-2+b1 [685 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libgvpr2 amd64 2.42.4-2+b1 [193 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 liblab-gamut1 amd64 2.42.4-2+b1 [198 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 graphviz amd64 2.42.4-2+b1 [616 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-3 [59.5 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-3 [41.7 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-3 [42.0 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-3 [53.5 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-3 [126 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libadios2-common-c++11-dev all 2.10.1+dfsg1-12 [25.3 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libadios2-common-core-dev amd64 2.10.1+dfsg1-12 [123 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-2.10 amd64 2.10.1+dfsg1-12 [402 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-dev amd64 2.10.1+dfsg1-12 [22.8 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.3-2+b1 [662 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 212 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 213 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 214 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 5.0.5-3 [2007 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 225 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-103-1t64 amd64 1.10.10+repack-4 [1312 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libpugixml1v5 amd64 1.14-2 [88.6 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-6+b2 [133 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b1 [221 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-plugins amd64 2.10.1+dfsg1-12 [14.7 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-2.10 amd64 2.10.1+dfsg1-12 [1733 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-2.10 amd64 2.10.1+dfsg1-12 [206 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-dev amd64 2.10.1+dfsg1-12 [79.3 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-dev amd64 2.10.1+dfsg1-12 [10.8 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [23.8 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.8.3+dfsg-2 [40.7 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-1.1+b2 [104 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-3+b1 [161 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-3+b1 [4990 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-1.1+b2 [119 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libbasix0.9 amd64 0.9.0-2 [409 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libbasix-dev amd64 0.9.0-2 [66.9 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-3.2 [10.6 MB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-3.2 [234 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-3.2 [235 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-3.2 [240 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-3.2 [245 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 259 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3.2 [333 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-3.2 [372 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-3.2 [239 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2 [281 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-3.2 [231 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-3.2 [297 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-3.2 [329 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-3.2 [346 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-3.2 [261 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 274 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-3.2 [523 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-3.2 [569 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 277 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-3.2 [271 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.5-3 [95.0 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.3-2+b1 [3958 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.5-3 [168 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.5-3 [1087 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.17 [3148 B] Get: 296 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-3.2 [290 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 298 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-3.2 [347 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-3.2 [375 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 301 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 302 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2 [269 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-3.2 [276 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 305 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-3.2 [235 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-3.2 [236 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 308 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b5 [316 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 libbtf2 amd64 1:7.8.3+dfsg-2 [24.7 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 libc6-dbg amd64 2.40-3 [7097 kB] Get: 311 http://deb.debian.org/debian unstable/main amd64 libcamd3 amd64 1:7.8.3+dfsg-2 [37.5 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libccolamd3 amd64 1:7.8.3+dfsg-2 [39.2 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [32.5 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 libcholmod5 amd64 1:7.8.3+dfsg-2 [638 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 libcombblas2.0.0t64 amd64 2.0.0-6 [264 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-3 [15.7 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.5.18+dfsg-3+b1 [303 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b2 [642 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.8-2 [449 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.8-2 [449 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-2+b1 [208 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.8-2 [1391 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 333 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 334 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.11.0-1 [461 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libcxsparse4 amd64 1:7.8.3+dfsg-2 [84.2 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 337 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2 [781 kB] Get: 338 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2 [347 kB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2 [617 kB] Get: 340 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2 [809 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2 [51.0 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2 [2113 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi3 amd64 3.3.10-2 [62.8 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi-dev amd64 3.3.10-2 [67.3 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libfmt-dev amd64 10.1.1+ds1-4 [177 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-102t64 amd64 1.10.10+repack-4 [90.7 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 348 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-100t64 amd64 1.10.10+repack-4 [40.7 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-103-1t64 amd64 1.10.10+repack-4 [131 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-100t64 amd64 1.10.10+repack-4 [21.4 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 1.10.10+repack-4 [2717 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 1.10.10+repack-4 [15.6 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libmetis5 amd64 5.1.0.dfsg-7+b2 [176 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libptscotch-7.0 amd64 7.0.5-1 [656 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist8 amd64 8.2.1+dfsg1-5 [610 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libhypre-2.31.0 amd64 2.31.0-3 [1710 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.0+dfsg1-2 [174 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.0+dfsg1-2 [21.9 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libhypre-dev amd64 2.31.0-3 [1974 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 libjs-modernizr all 3.13.0-0.1 [191 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libklu2 amd64 1:7.8.3+dfsg-2 [90.6 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libldl3 amd64 1:7.8.3+dfsg-2 [24.5 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get: 372 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi2.2 amd64 2.2.1-5 [1578 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libmumps-5.7 amd64 5.7.3-3 [1965 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libmumps-headers-dev all 5.7.3-3 [36.3 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi-dev amd64 2.2.1-5 [10.7 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libscalapack-mpi-dev amd64 2.2.1-5 [5888 B] Get: 377 http://deb.debian.org/debian unstable/main amd64 libmumps-dev amd64 5.7.3-3 [1861 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libparpack2t64 amd64 3.9.1-1.1+b2 [99.3 kB] Get: 380 http://deb.debian.org/debian unstable/main amd64 libparpack2-dev amd64 3.9.1-1.1+b2 [110 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libumfpack6 amd64 1:7.8.3+dfsg-2 [280 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libparu1 amd64 1:7.8.3+dfsg-2 [65.1 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libspqr4 amd64 1:7.8.3+dfsg-2 [146 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.21 amd64 3.21.6+dfsg1-2 [7277 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-mongoose3 amd64 1:7.8.3+dfsg-2 [47.3 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 librbio4 amd64 1:7.8.3+dfsg-2 [39.9 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libspex3 amd64 1:7.8.3+dfsg-2 [59.9 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-dev amd64 1:7.8.3+dfsg-2 [1476 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libscotch-7.0 amd64 7.0.5-1 [411 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 libscotch-dev amd64 7.0.5-1 [1574 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 libptscotch-dev amd64 7.0.5-1 [1375 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2024.05.08-1 [49.8 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b2 [8672 B] Get: 396 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist-dev amd64 8.2.1+dfsg1-5 [903 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.2-3+b2 [40.8 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 libyaml-dev amd64 0.2.5-1+b2 [63.5 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 libpetsc3.21-dev-common all 3.21.6+dfsg1-2 [309 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 valgrind amd64 1:3.20.0-2.1 [14.3 MB] Get: 407 http://deb.debian.org/debian unstable/main amd64 valgrind-mpi amd64 1:3.20.0-2.1 [123 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.21-dev amd64 3.21.6+dfsg1-2 [7010 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex-dev all 3.21.6+dfsg1-2 [12.5 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.21 amd64 3.21.6+dfsg1-2 [7057 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.21-dev amd64 3.21.6+dfsg1-2 [7053 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libpetsc-real-dev all 3.21.6+dfsg1-2 [12.5 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libpugixml-dev amd64 1.14-2 [109 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-3 [5124 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B] Get: 417 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B] Get: 418 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.21 amd64 3.21.2+dfsg1-2 [1252 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.21-dev amd64 3.21.2+dfsg1-2 [5707 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 libslepc-complex-dev amd64 3.21.2+dfsg1-2 [15.3 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.21 amd64 3.21.2+dfsg1-2 [1219 kB] Get: 423 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.21-dev amd64 3.21.2+dfsg1-2 [5702 kB] Get: 424 http://deb.debian.org/debian unstable/main amd64 libslepc-real-dev amd64 3.21.2+dfsg1-2 [15.3 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 libspdlog1.12 amd64 1:1.12.0+ds-2+b3 [104 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 libspdlog-dev amd64 1:1.12.0+ds-2+b3 [85.5 kB] Get: 427 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.2 [793 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 robin-map-dev all 1.3.0-1 [29.8 kB] Get: 432 http://deb.debian.org/debian unstable/main amd64 nanobind-dev all 2.2.0-1 [159 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-4 [731 kB] Get: 443 http://deb.debian.org/debian unstable/main amd64 python-petsc4py-doc all 3.21.6-2 [771 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 446 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B] Get: 449 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 python3-ufl all 2024.2.0-2 [150 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 python3-basix amd64 0.9.0-2 [132 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b5 [318 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 458 http://deb.debian.org/debian unstable/main amd64 python3-cffi-backend amd64 1.17.1-2 [87.5 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 python3-ply all 3.11-7 [62.6 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 python3-pycparser all 2.22-2 [78.0 kB] Get: 461 http://deb.debian.org/debian unstable/main amd64 python3-cffi all 1.17.1-2 [89.4 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1 [118 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2 [215 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 466 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-distlib all 0.3.9-1 [257 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 python3-filelock all 3.16.1-1 [12.6 kB] Get: 475 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 477 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get: 479 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.54.1-4 [1429 kB] Get: 485 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 487 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 488 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 python3-rpds-py amd64 0.20.1-1 [252 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 python3-referencing all 0.35.1-1 [23.5 kB] Get: 492 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 493 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 495 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 496 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 497 http://deb.debian.org/debian unstable/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get: 498 http://deb.debian.org/debian unstable/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 499 http://deb.debian.org/debian unstable/main amd64 python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 500 http://deb.debian.org/debian unstable/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 501 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-1 [134 kB] Get: 502 http://deb.debian.org/debian unstable/main amd64 python3-jupytext all 1.16.1+ds1-2 [87.2 kB] Get: 503 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2 [60.9 kB] Get: 504 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get: 505 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB] Get: 506 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-1 [103 kB] Get: 507 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get: 508 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get: 509 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 510 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get: 511 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.0.0-9 [742 kB] Get: 512 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 513 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 514 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 515 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 516 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-4 [588 kB] Get: 517 http://deb.debian.org/debian unstable/main amd64 python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 518 http://deb.debian.org/debian unstable/main amd64 python3-nanobind all 2.2.0-1 [39.4 kB] Get: 519 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 520 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Get: 521 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real3.21 amd64 3.21.6-2 [1235 kB] Get: 522 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real all 3.21.6-2 [10.5 kB] Get: 523 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex3.21 amd64 3.21.6-2 [1236 kB] Get: 524 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex all 3.21.6-2 [10.5 kB] Get: 525 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py all 3.21.6-2 [10.7 kB] Get: 526 http://deb.debian.org/debian unstable/main amd64 python3-pip all 24.3.1+dfsg-1 [1441 kB] Get: 527 http://deb.debian.org/debian unstable/main amd64 python3-pip-whl all 24.3.1+dfsg-1 [1501 kB] Get: 528 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 529 http://deb.debian.org/debian unstable/main amd64 python3-pusimp all 0.1.1-1 [10.1 kB] Get: 530 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-metadata all 0.9.0~rc1-1 [20.9 kB] Get: 531 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 532 http://deb.debian.org/debian unstable/main amd64 python3-scikit-build-core all 0.10.7-2 [123 kB] Get: 533 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-whl all 75.2.0-1 [1249 kB] Get: 534 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real3.21 amd64 3.21.2-1 [307 kB] Get: 535 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real all 3.21.2-1 [6452 B] Get: 536 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex3.21 amd64 3.21.2-1 [306 kB] Get: 537 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex all 3.21.2-1 [6520 B] Get: 538 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py all 3.21.2-1 [6644 B] Get: 539 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 540 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 541 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Get: 542 http://deb.debian.org/debian unstable/main amd64 python3-wheel-whl all 0.44.0-2 [70.1 kB] Get: 543 http://deb.debian.org/debian unstable/main amd64 python3-virtualenv all 20.27.0+ds-1 [71.1 kB] Fetched 446 MB in 20s (22.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. 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Setting up libcxsparse4:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-serialization1.83-dev:amd64 (1.83.0-3.2) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libboost-filesystem1.83-dev:amd64 (1.83.0-3.2) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libcamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libsuperlu7:amd64 (7.0.0+dfsg1-2) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-8) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.18-1+b1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-8) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:amd64 (1:1.1.2-3+b2) ... Setting up libxml2-dev:amd64 (2.12.7+dfsg+really2.9.14-0.2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:amd64 (1.83.0-3.2) ... Setting up libllvm17t64:amd64 (1:17.0.6-18) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up librbio4:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-date-time1.83-dev:amd64 (1.83.0-3.2) ... Setting up libldap-dev:amd64 (2.5.18+dfsg-3+b1) ... Setting up opencl-clhpp-headers (3.0~2024.05.08-1) ... Setting up liblapack-dev:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libfmt-dev:amd64 (10.1.1+ds1-4) ... Setting up libboost-regex1.83-dev:amd64 (1.83.0-3.2) ... Setting up pkg-config:amd64 (1.8.1-4) ... Setting up libgav1-1:amd64 (0.19.0-2+b2) ... Setting up libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.2-1+b2) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libccolamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:amd64 (2.42.4-2+b1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libbasix0.9:amd64 (0.9.0-2) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libhwloc-dev:amd64 (2.11.2-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libsuperlu-dev:amd64 (7.0.0+dfsg1-2) ... Setting up libbasix-dev:amd64 (0.9.0-2) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libfftw3-dev:amd64 (3.3.10-2) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libclang-cpp19 (1:19.1.3-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-3.2) ... Setting up libgnutls28-dev:amd64 (3.8.8-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libcholmod5:amd64 (1:7.8.3+dfsg-2) ... Setting up libxft2:amd64 (2.3.6-1+b2) ... Setting up libarpack2-dev:amd64 (3.9.1-1.1+b2) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libzmq5:amd64 (4.3.5-1+b3) ... Setting up libcurl4t64:amd64 (8.11.0-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up libspqr4:amd64 (1:7.8.3+dfsg-2) ... Setting up python3-pip-whl (24.3.1+dfsg-1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-3.2) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up nanobind-dev (2.2.0-1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-3) ... Setting up python3.12-tk (3.12.7-3) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up libspdlog-dev:amd64 (1:1.12.0+ds-2+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up doxygen (1.9.8+ds-2+b3) ... Setting up libklu2:amd64 (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:amd64 (1.21.3-3) ... Setting up libraqm0:amd64 (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:amd64 (5.0.3-2+b1) ... Setting up libumfpack6:amd64 (1:7.8.3+dfsg-2) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up cmake (3.30.5-1) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libpmix-dev:amd64 (5.0.3-2+b1) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-3) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libxmu6:amd64 (2:1.1.3-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up libkdb5-10t64:amd64 (1.21.3-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up python-petsc4py-doc (3.21.6-2) ... Setting up libibverbs-dev:amd64 (52.0-2+b1) ... Setting up libparu1:amd64 (1:7.8.3+dfsg-2) ... Setting up libpython3.12t64:amd64 (3.12.7-3) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-3) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up krb5-multidev:amd64 (1.21.3-3) ... Setting up libsuitesparse-dev:amd64 (1:7.8.3+dfsg-2) ... Setting up python3 (3.12.6-1) ... /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:amd64 (3.12.7-3) ... Setting up python3-distlib (0.3.9-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up libkrb5-dev:amd64 (1.21.3-3) ... Setting up python3-pil:amd64 (10.4.0-1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up libcurl4-openssl-dev:amd64 (8.11.0-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b5) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.7-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pip (24.3.1+dfsg-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.20.1-1) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:amd64 (5.3.0-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-pusimp (0.1.1-1) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-cffi-backend:amd64 (1.17.1-2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (24.2.0-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up python3-nanobind (2.2.0-1) ... Setting up python3-filelock (3.16.1-1) ... Setting up libpython3-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-pyproject-metadata (0.9.0~rc1-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-virtualenv (20.27.0+ds-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up libpython3-all-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.6-1) ... Setting up libopenmpi3t64:amd64 (5.0.5-3) ... Setting up libparpack2t64:amd64 (3.9.1-1.1+b2) ... Setting up libboost-mpi1.83.0 (1.83.0-3.2) ... Setting up openmpi-bin (5.0.5-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpirun.1.gz because associated file /usr/share/man/man1/mpirun.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-all-dev (3.12.6-1) ... Setting up libptscotch-7.0:amd64 (7.0.5-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-scikit-build-core (0.10.7-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-cffi (1.17.1-2) ... Setting up mpi-default-bin (1.17) ... Setting up libcombblas2.0.0t64:amd64 (2.0.0-6) ... Setting up libfftw3-mpi3:amd64 (3.3.10-2) ... Setting up python3-mpi4py (4.0.0-9) ... Setting up libhdf5-openmpi-103-1t64:amd64 (1.10.10+repack-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up libhdf5-openmpi-fortran-102t64:amd64 (1.10.10+repack-4) ... Setting up libhdf5-openmpi-cpp-103-1t64:amd64 (1.10.10+repack-4) ... Setting up python3-contourpy (1.3.0-2) ... Setting up libopenmpi-dev:amd64 (5.0.5-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up libscalapack-openmpi2.2:amd64 (2.2.1-5) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up python3-ufl (2024.2.0-2) ... Setting up libsuperlu-dist8:amd64 (8.2.1+dfsg1-5) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up libfftw3-mpi-dev:amd64 (3.3.10-2) ... Setting up libhdf5-openmpi-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libsuperlu-dist-dev:amd64 (8.2.1+dfsg1-5) ... Setting up libhdf5-openmpi-hl-fortran-100t64:amd64 (1.10.10+repack-4) ... Setting up libmumps-5.7:amd64 (5.7.3-3) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up libhypre-2.31.0:amd64 (2.31.0-3) ... Setting up libscalapack-openmpi-dev:amd64 (2.2.1-5) ... Setting up mpi-default-dev (1.17) ... Setting up libpetsc-complex3.21:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up libhdf5-openmpi-hl-cpp-100t64:amd64 (1.10.10+repack-4) ... Setting up libscalapack-mpi-dev:amd64 (2.2.1-5) ... Setting up libhdf5-openmpi-dev (1.10.10+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-basix (0.9.0-2) ... Setting up libmumps-dev:amd64 (5.7.3-3) ... Setting up libscotch-dev (7.0.5-1) ... Setting up libparpack2-dev:amd64 (3.9.1-1.1+b2) ... Setting up libpetsc-real3.21:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up python3-nbformat (5.9.1-1) ... Setting up libhypre-dev:amd64 (2.31.0-3) ... Setting up libptscotch-dev (7.0.5-1) ... Setting up python3-ffcx (1:0.9.0-2) ... Setting up libboost-mpi1.83-dev (1.83.0-3.2) ... Setting up libslepc-complex3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up python3-jupytext (1.16.1+ds1-2) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libhdf5-mpi-dev (1.10.10+repack-4) ... Setting up python3-petsc4py-complex3.21 (3.21.6-2) ... Setting up python3-slepc4py-complex3.21 (3.21.2-1) ... Setting up python3-petsc4py (3.21.6-2) ... Setting up libslepc-real3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up python3-petsc4py-real3.21 (3.21.6-2) ... Setting up python3-petsc4py-real (3.21.6-2) ... Setting up libpetsc3.21-dev-common (3.21.6+dfsg1-2) ... Setting up libpetsc-complex3.21-dev:amd64 (3.21.6+dfsg1-2) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc_complex.so (libpetsc_complex.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up python3-slepc4py-real3.21 (3.21.2-1) ... Setting up python3-petsc4py-complex (3.21.6-2) ... Setting up python3-slepc4py-complex (3.21.2-1) ... Setting up libpetsc-real3.21-dev:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up libslepc-complex3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_complex.so (libslepc_complex.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libpetsc-real-dev (3.21.6+dfsg1-2) ... Setting up libpetsc-complex-dev (3.21.6+dfsg1-2) ... Setting up python3-slepc4py (3.21.2-1) ... Setting up python3-slepc4py-real (3.21.2-1) ... Setting up libslepc-real3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libslepc-complex-dev (3.21.2+dfsg1-2) ... Setting up libslepc-real-dev (3.21.2+dfsg1-2) ... Setting up python3-fonttools (4.54.1-4) ... Setting up libadios2-mpi-plugins:amd64 (2.10.1+dfsg1-12) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up libheif-plugin-dav1d:amd64 (1.19.3-1) ... Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... Setting up python3-matplotlib (3.8.3-3) ... Setting up libadios2-mpi-core-2.10:amd64 (2.10.1+dfsg1-12) ... Setting up libheif1:amd64 (1.19.3-1) ... Setting up libadios2-mpi-c++11-2.10:amd64 (2.10.1+dfsg1-12) ... Setting up libadios2-mpi-core-dev:amd64 (2.10.1+dfsg1-12) ... Setting up libgd3:amd64 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libadios2-mpi-c++11-dev:amd64 (2.10.1+dfsg1-12) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-myst-parser (4.0.0-1) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake --with python3,sphinxdoc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex rm -rf python/build-real python/build-complex rm -rf debian/tmp-real debian/tmp-complex rm -rf python/fenics_dolfinx.egg-info rm -rf python/doc/build python/doc/source/generated rm -rf cpp/doc/latex cpp/doc/html cpp/doc/xml rm -rf /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake --with python3,sphinxdoc dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 cd obj-x86_64-linux-gnu-real && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.7") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Found PETSc version 3.21.6, prefix: /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.21.2, prefix: /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.5) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (6.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 cd obj-x86_64-linux-gnu-complex && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.7") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Found PETSc version 3.21.6, prefix: /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.21.2, prefix: /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.5) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (7.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real cd obj-x86_64-linux-gnu-real && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o [ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp [ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp [ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp [ 34%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o CMakeFiles/dolfinx.dir/common/timing.cpp.o -c 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/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp [ 72%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration 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/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o [ 88%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF 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CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o CMakeFiles/dolfinx.dir/graph/partition.cpp.o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o CMakeFiles/dolfinx.dir/io/cells.cpp.o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o CMakeFiles/dolfinx.dir/la/petsc.cpp.o CMakeFiles/dolfinx.dir/la/slepc.cpp.o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_symlink_library libdolfinx_real.so.0.9.0 libdolfinx_real.so.0.9 libdolfinx_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [100%] Built target dolfinx make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex cd obj-x86_64-linux-gnu-complex && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include 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/usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o [ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o [ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o [ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o [ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o [ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o [ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o [ 39%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp [ 44%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o [ 41%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp [ 46%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp [ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB 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cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 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/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration 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-DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/fem/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC 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/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp [ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o [ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partition.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partition.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp [ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o [ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp [ 65%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp [ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o [ 81%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp [ 86%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp [ 88%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp [ 90%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp [100%] Linking CXX shared library libdolfinx_complex.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 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/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cp COPYING.LESSER python for build in real; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ ADIOS2_ALWAYS_USE_MPI=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmpdom0b7ux/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.7") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (18.3s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmpdom0b7ux/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmpdom0b7ux/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmpdom0b7ux/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpdom0b7ux/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmpdom0b7ux/build/CMakeFiles /tmp/tmpdom0b7ux/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmpdom0b7ux/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' cd /tmp/tmpdom0b7ux/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmpdom0b7ux/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong 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[ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 23.18s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.80s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.50s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 7.64s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 7.62s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.hexahedron-Lagrange] 6.05s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_matrix_assembly_block[GhostMode.none] 5.89s call test/unit/fem/test_element_integrals.py::test_plus_minus[float32-CellType.hexahedron-DG] 5.53s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.hexahedron-DG] 5.38s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 5.36s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 5.14s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 5.06s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.triangle-DG] 4.70s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] 4.31s call test/unit/fem/test_element_integrals.py::test_plus_minus[float32-CellType.quadrilateral-Lagrange] 4.30s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Lagrange-3-4] 4.16s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.quadrilateral-DG] 4.09s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 4.08s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 4.00s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.tetrahedron-Lagrange] 3.93s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 1174.88s (0:19:34) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cp COPYING.LESSER python dh_numpy3 -a for build in complex; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmp32wku1zv/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.7") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (2.3s) -- Generating done (0.0s) -- Build files have been written to: /tmp/tmp32wku1zv/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmp32wku1zv/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmp32wku1zv/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp32wku1zv/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmp32wku1zv/build/CMakeFiles /tmp/tmp32wku1zv/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmp32wku1zv/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' cd /tmp/tmp32wku1zv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -c /usr/share/nanobind/src/nb_enum.cpp [ 20%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -c /usr/share/nanobind/src/nb_ndarray.cpp [ 25%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -c /usr/share/nanobind/src/nb_static_property.cpp [ 29%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -c /usr/share/nanobind/src/common.cpp [ 33%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -c /usr/share/nanobind/src/error.cpp [ 37%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o -c /usr/share/nanobind/src/trampoline.cpp [ 41%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -c /usr/share/nanobind/src/implicit.cpp [ 45%] Linking CXX static library libnanobind-static.a /usr/bin/cmake -P CMakeFiles/nanobind-static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' [ 45%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' cd /tmp/tmp32wku1zv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.12 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o 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CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' [100%] Built target cpp gmake[3]: Leaving directory '/tmp/tmp32wku1zv/build' /usr/bin/cmake -E cmake_progress_start /tmp/tmp32wku1zv/build/CMakeFiles 0 gmake[2]: Leaving directory '/tmp/tmp32wku1zv/build' *** Installing project into wheel... -- Install configuration: "Release" -- Installing: /tmp/tmp32wku1zv/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/tmp/tmp32wku1zv/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild base:311: cd /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build; python3.12 -m pytest --durations=20 -k "" ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 2643 items / 2 skipped test/debian-only/test_pusimp.py .sss.. [ 0%] test/unit/common/test_index_map.py ....s [ 0%] test/unit/common/test_mpi.py .. [ 0%] test/unit/common/test_public_api.py s [ 0%] test/unit/common/test_timer.py .. [ 0%] test/unit/common/test_version.py . [ 0%] test/unit/fem/test_assemble_domains.py ........... [ 1%] test/unit/fem/test_assemble_mesh_independent_form.py ........ [ 1%] test/unit/fem/test_assemble_submesh.py ................................. [ 2%] .............................................x.. [ 4%] test/unit/fem/test_assembler.py ........................................ [ 5%] .................... [ 6%] test/unit/fem/test_bcs.py .................... [ 7%] test/unit/fem/test_complex_assembler.py .... [ 7%] test/unit/fem/test_constant.py ....... [ 7%] test/unit/fem/test_custom_basix_element.py ............................. [ 8%] .............................xx..xx.. [ 10%] test/unit/fem/test_discrete_operators.py ............................... [ 11%] ........................................................................ [ 14%] ............................................. [ 15%] test/unit/fem/test_dof_coordinates.py ................ [ 16%] test/unit/fem/test_dof_permuting.py .................................... [ 17%] ........................................................................ [ 20%] ..................................ssssss [ 22%] test/unit/fem/test_dofmap.py ss.ss.ssss......... [ 22%] test/unit/fem/test_element_integrals.py ................................ [ 24%] ........................................................................ [ 26%] ........................................................................ [ 29%] ........................................................................ [ 32%] ................................ssssssssssssssss........................ [ 34%] [ 34%] test/unit/fem/test_expression.py ............................. [ 36%] test/unit/fem/test_fem_pipeline.py ...........s.................s....... [ 37%] ..........s.s.......s.............................s..................... [ 40%] .s.............................. [ 41%] test/unit/fem/test_forms.py .. [ 41%] test/unit/fem/test_function.py ............ [ 41%] test/unit/fem/test_function_space.py ............. [ 42%] test/unit/fem/test_ghost_mesh_assembly.py ..X..X [ 42%] test/unit/fem/test_interpolation.py .................................... [ 44%] ........................................................................ [ 46%] ........................................................................ [ 49%] ...s............................ [ 50%] test/unit/fem/test_mixed_element.py ...................... [ 51%] test/unit/fem/test_mixed_mesh_dofmap.py .. [ 51%] test/unit/fem/test_petsc_discrete_operators.py ......................... [ 52%] ........................................................................ [ 55%] ................ [ 55%] test/unit/fem/test_petsc_nonlinear_assembler.py ...... [ 56%] test/unit/fem/test_petsc_solver_wrappers.py .. [ 56%] test/unit/fem/test_quadrature_elements.py .............................. [ 57%] ...... [ 57%] test/unit/fem/test_special_functions.py ... [ 57%] test/unit/fem/test_symmetric_tensor.py ........ [ 57%] test/unit/fem/test_symmetry.py ......................................... [ 59%] ....................................................... [ 61%] test/unit/fem/test_vector_assemble.py .. [ 61%] test/unit/fem/test_vector_function.py .......... [ 62%] test/unit/geometry/test_bounding_box_tree.py ........................... [ 63%] ................................. [ 64%] test/unit/geometry/test_gjk.py ......................................... [ 65%] ...................... [ 66%] test/unit/graph/test_adjacencylist.py .. [ 66%] test/unit/io/test_adios2.py ............................................ [ 68%] .....ssssssss [ 68%] test/unit/io/test_vtk.py ....................... [ 69%] test/unit/io/test_xdmf_function.py ..................................... [ 71%] ...........................................s [ 72%] test/unit/io/test_xdmf_mesh.py ..........ss............................. [ 74%] ................................... [ 75%] test/unit/io/test_xdmf_meshdata.py .. [ 75%] test/unit/io/test_xdmf_meshtags.py .... [ 75%] test/unit/la/test_matrix_csr.py ............................ [ 77%] test/unit/la/test_matrix_vector.py ............xxx....xxx....xxxxxxxxxx [ 78%] test/unit/la/test_nullspace.py ................................ [ 79%] test/unit/la/test_sparsity_pattern.py . [ 79%] test/unit/la/test_vector_scatter.py ........... [ 80%] test/unit/mesh/test_cell.py ... [ 80%] test/unit/mesh/test_create_mixed_mesh.py . [ 80%] test/unit/mesh/test_dual_graph.py . [ 80%] test/unit/mesh/test_face.py s. [ 80%] test/unit/mesh/test_ghost_mesh.py X..X...X [ 80%] test/unit/mesh/test_higher_order_mesh.py ............................... [ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_discrete_operators.py: 72 warnings /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/test/unit/fem/test_discrete_operators.py:253: ComplexWarning: Casting complex values to real discards the imaginary part ux[: len(u.x.array)] = u.x.array[:] test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 16.77s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 9.47s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 9.38s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 5.32s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 4.72s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 4.40s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 4.23s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 4.17s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 4.16s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] 3.96s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] 3.90s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 3.43s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 3.42s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] 3.22s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] 3.21s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 3.12s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 3.12s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 3.06s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 2.93s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] 2.91s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 953.01s (0:15:53) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc if [ "x" != "xno" ]; then \ case " mips64el hurd-i386 m68k sh4 " in \ *\ amd64\ *) echo "ALL tests have been disabled on amd64";; \ *) set -e; \ export CTEST_OUTPUT_ON_FAILURE=1; \ for build in real complex; do \ echo "== testing $build number build =="; \ builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-${build}; \ for mytest in test demo; do \ echo "running tests from $mytest for $build build"; \ testdir=${builddir}/run_${mytest}; \ mkdir -p $testdir; \ cd $testdir; \ if [ "x" != "x" ]; then echo "set(CTEST_CUSTOM_TESTS_IGNORE )" >> CTestCustom.cmake; fi; \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} cmake -DCMAKE_MODULE_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DDOLFINX_DIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DMPIEXEC_PARAMS:STRING="--oversubscribe" \ /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/${mytest}; \ make all VERBOSE=1; \ OMPI_ALLOW_RUN_AS_ROOT=1 OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 make test VERBOSE=1; \ done; \ cd /build/reproducible-path/fenics-dolfinx-0.9.0; \ done; \ esac; \ fi == testing real number build == running tests from test for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (2.1s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include 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-isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/io.cpp.o -MF CMakeFiles/unittests.dir/io.cpp.o.d -o CMakeFiles/unittests.dir/io.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/io.cpp [ 35%] Building CXX object CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem 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/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sort.cpp.o -MF CMakeFiles/unittests.dir/common/sort.cpp.o.d -o CMakeFiles/unittests.dir/common/sort.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sort.cpp [ 52%] Building CXX object CMakeFiles/unittests.dir/fem/functionspace.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem 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-isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/option.cpp [ 88%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/rectangle.cpp [ 94%] Building C object CMakeFiles/unittests.dir/poisson.c.o /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 0.67 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.67 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done (2.2s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 3%] Compile biharmonic.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 7%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 11%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/biharmonic.c [ 15%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 15%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 19%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 23%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem 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-DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/mixed_codim0.c [ 30%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 30%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 34%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 38%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 38%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 42%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 46%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 50%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/poisson.c [ 53%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 53%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 57%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 61%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 65%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/poisson.c [ 69%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 69%] Built target demo_poisson_matrix_free make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 73%] Compile hyperelasticity.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 76%] Building CXX object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -MF CMakeFiles/demo_hyperelasticity.dir/main.cpp.o.d -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp [ 80%] Building C object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -MF CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o.d -o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/hyperelasticity.c [ 84%] Linking CXX executable demo_hyperelasticity cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_hyperelasticity.dir/main.cpp.o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -o demo_hyperelasticity -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 84%] Built target demo_hyperelasticity make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 88%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 92%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 92%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 96%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.51 sec Start 2: demo_biharmonic_mpi_3 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.47 sec Start 3: demo_biharmonic_serial 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.43 sec Start 4: demo_codim_0_assembly_mpi_2 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.40 sec Start 5: demo_codim_0_assembly_mpi_3 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec Start 6: demo_codim_0_assembly_serial 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec Start 7: demo_custom_kernel_mpi_2 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.95 sec Start 8: demo_custom_kernel_mpi_3 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.85 sec Start 9: demo_custom_kernel_serial 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.84 sec Start 10: demo_poisson_mpi_2 10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.43 sec Start 11: demo_poisson_mpi_3 11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.47 sec Start 12: demo_poisson_serial 12/24 Test #12: demo_poisson_serial .......................... Passed 0.33 sec Start 13: demo_poisson_matrix_free_mpi_2 13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.39 sec Start 14: demo_poisson_matrix_free_mpi_3 14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.60 sec Start 15: demo_poisson_matrix_free_serial 15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec Start 16: demo_hyperelasticity_mpi_2 16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.63 sec Start 17: demo_hyperelasticity_mpi_3 17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.67 sec Start 18: demo_hyperelasticity_serial 18/24 Test #18: demo_hyperelasticity_serial .................. Passed 1.00 sec Start 19: demo_interpolation-io_mpi_2 19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.41 sec Start 20: demo_interpolation-io_mpi_3 20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.42 sec Start 21: demo_interpolation-io_serial 21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.33 sec Start 22: demo_interpolation_different_meshes_mpi_2 22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.83 sec Start 23: demo_interpolation_different_meshes_mpi_3 23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.71 sec Start 24: demo_interpolation_different_meshes_serial 24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.80 sec 100% tests passed, 0 tests failed out of 24 Total Test time (real) = 25.54 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (2.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem 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/usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 0.67 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.67 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode -- Configuring done (2.3s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 4%] Compile biharmonic.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 9%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 13%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/biharmonic.c [ 18%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 18%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 22%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 27%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -MF CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o.d -o CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp [ 31%] Building C object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/mixed_codim0.c [ 36%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 36%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 40%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 45%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 45%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 50%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 54%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 59%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/poisson.c [ 63%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 63%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 68%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 72%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 77%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/poisson.c [ 81%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 81%] Built target demo_poisson_matrix_free make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 86%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 90%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 90%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 95%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.54 sec Start 2: demo_biharmonic_mpi_3 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.55 sec Start 3: demo_biharmonic_serial 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.52 sec Start 4: demo_codim_0_assembly_mpi_2 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.40 sec Start 5: demo_codim_0_assembly_mpi_3 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec Start 6: demo_codim_0_assembly_serial 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec Start 7: demo_custom_kernel_mpi_2 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.99 sec Start 8: demo_custom_kernel_mpi_3 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.86 sec Start 9: demo_custom_kernel_serial 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.85 sec Start 10: demo_poisson_mpi_2 10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.45 sec Start 11: demo_poisson_mpi_3 11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.42 sec Start 12: demo_poisson_serial 12/21 Test #12: demo_poisson_serial .......................... Passed 0.32 sec Start 13: demo_poisson_matrix_free_mpi_2 13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.41 sec Start 14: demo_poisson_matrix_free_mpi_3 14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.40 sec Start 15: demo_poisson_matrix_free_serial 15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec Start 16: demo_interpolation-io_mpi_2 16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.43 sec Start 17: demo_interpolation-io_mpi_3 17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.46 sec Start 18: demo_interpolation-io_serial 18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.33 sec Start 19: demo_interpolation_different_meshes_mpi_2 19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.88 sec Start 20: demo_interpolation_different_meshes_mpi_3 20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.87 sec Start 21: demo_interpolation_different_meshes_serial 21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.80 sec 100% tests passed, 0 tests failed out of 21 Total Test time (real) = 21.52 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' (cd cpp/doc; doxygen) warning: Tag 'HTML_TIMESTAMP' at line 1387 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 2055 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Reading and parsing tag files Parsing files Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... 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Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/README.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_vector_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assembler.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Constant.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dolfinx_fem.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Expression.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Form.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating file documentation... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... Generating group documentation... Generating class documentation... Generating docs for compound HyperElasticProblem... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound basix::FiniteElement... Generating docs for namespace dolfinx Generating docs for compound dolfinx::Table... Generating docs for concept dolfinx::scalar... Generating docs for namespace dolfinx::common Generating docs for compound dolfinx::common::IndexMap... Generating docs for compound dolfinx::common::Scatterer... Generating docs for compound dolfinx::common::TimeLogger... Generating docs for compound dolfinx::common::TimeLogManager... Generating docs for compound dolfinx::common::Timer... Generating docs for namespace dolfinx::fem Generating docs for compound dolfinx::fem::Constant... Generating docs for compound dolfinx::fem::CoordinateElement... Generating docs for compound dolfinx::fem::DirichletBC... Generating docs for compound dolfinx::fem::DofMap... Generating docs for compound dolfinx::fem::ElementDofLayout... Generating docs for compound dolfinx::fem::Expression... Generating docs for compound dolfinx::fem::FiniteElement... Generating docs for compound dolfinx::fem::Form... Generating docs for compound dolfinx::fem::Function... Generating docs for compound dolfinx::fem::FunctionSpace... Generating docs for compound dolfinx::fem::integral_data... Generating docs for concept dolfinx::fem::MDSpan... Generating docs for concept dolfinx::fem::DofTransformKernel... Generating docs for concept dolfinx::fem::FEkernel... Generating docs for concept dolfinx::fem::impl::FetchCells... Generating docs for namespace dolfinx::fem::petsc Generating docs for namespace dolfinx::fem::sparsitybuild Generating docs for namespace dolfinx::geometry Generating docs for compound dolfinx::geometry::BoundingBoxTree... Generating docs for compound dolfinx::geometry::PointOwnershipData... Generating docs for namespace dolfinx::graph Generating docs for compound dolfinx::graph::AdjacencyList... Generating docs for namespace dolfinx::graph::build Generating docs for namespace dolfinx::graph::kahip Generating docs for namespace dolfinx::io Generating docs for compound dolfinx::io::ADIOS2Writer... Generating docs for compound dolfinx::io::VTKFile... Generating docs for compound dolfinx::io::XDMFFile... Generating docs for namespace dolfinx::io::cells Generating docs for namespace dolfinx::io::xdmf_function Generating docs for namespace dolfinx::io::xdmf_mesh Generating docs for namespace dolfinx::la Generating docs for compound dolfinx::la::MatrixCSR... Generating docs for compound dolfinx::la::SLEPcEigenSolver... Generating docs for compound dolfinx::la::SparsityPattern... Generating docs for compound dolfinx::la::Vector... Generating docs for concept dolfinx::la::MatSet... Generating docs for namespace dolfinx::la::petsc Generating docs for compound dolfinx::la::petsc::KrylovSolver... Generating docs for compound dolfinx::la::petsc::Matrix... Generating docs for compound dolfinx::la::petsc::Operator... Generating docs for compound dolfinx::la::petsc::Vector... Generating docs for namespace dolfinx::la::petsc::options Generating docs for namespace dolfinx::mesh Generating docs for compound dolfinx::mesh::Geometry... Generating docs for compound dolfinx::mesh::Mesh... Generating docs for compound dolfinx::mesh::MeshTags... Generating docs for compound dolfinx::mesh::Topology... Generating docs for concept dolfinx::mesh::MarkerFn... Generating docs for namespace dolfinx::MPI Generating docs for compound dolfinx::MPI::Comm... Generating docs for compound dolfinx::MPI::dependent_false... Generating docs for namespace dolfinx::nls Generating docs for compound dolfinx::nls::petsc::NewtonSolver... Generating docs for namespace dolfinx::refinement Generating docs for namespace dolfinx::refinement::plaza Generating graph info page... Generating directory documentation... Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class dolfinx::io::ADIOS2Writer Generating XML output for class dolfinx::graph::AdjacencyList Generating XML output for class dolfinx::geometry::BoundingBoxTree Generating XML output for class dolfinx::MPI::Comm Generating XML output for class dolfinx::fem::Constant Generating XML output for class dolfinx::fem::CoordinateElement Generating XML output for class dolfinx::MPI::dependent_false Generating XML output for class dolfinx::fem::DirichletBC Generating XML output for class dolfinx::fem::DofMap Generating XML output for class dolfinx::fem::ElementDofLayout Generating XML output for class dolfinx::fem::Expression Generating XML output for class dolfinx::io::FidesWriter Generating XML output for class basix::FiniteElement Generating XML output for class dolfinx::fem::FiniteElement Generating XML output for class dolfinx::fem::Form Generating XML output for class dolfinx::fem::Function Generating XML output for class dolfinx::fem::FunctionSpace Generating XML output for class dolfinx::mesh::Geometry Generating XML output for class HyperElasticProblem Generating XML output for class dolfinx::common::IndexMap Generating XML output for class dolfinx::fem::integral_data Generating XML output for class dolfinx::la::petsc::KrylovSolver Generating XML output for class dolfinx::la::petsc::Matrix Generating XML output for class dolfinx::la::MatrixCSR Generating XML output for class dolfinx::mesh::Mesh Generating XML output for class dolfinx::mesh::MeshTags Generating XML output for class dolfinx::nls::petsc::NewtonSolver Generating XML output for class dolfinx::la::petsc::Operator Generating XML output for class dolfinx::geometry::PointOwnershipData Generating XML output for class dolfinx::scalar_value_type Generating XML output for class dolfinx::scalar_value_type< T, std::void_t< typename T::value_type > > Generating XML output for class dolfinx::common::Scatterer Generating XML output for class dolfinx::la::SLEPcEigenSolver Generating XML output for class dolfinx::la::SparsityPattern Generating XML output for class dolfinx::Table Generating XML output for class dolfinx::common::TimeLogger Generating XML output for class dolfinx::common::TimeLogManager Generating XML output for class dolfinx::common::Timer Generating XML output for class dolfinx::mesh::Topology Generating XML output for class dolfinx::la::petsc::Vector Generating XML output for class dolfinx::la::Vector Generating XML output for class dolfinx::io::VTKFile Generating XML output for class dolfinx::io::VTXWriter Generating XML output for class dolfinx::io::XDMFFile Generating XML output for concept dolfinx::fem::DofTransformKernel Generating XML output for concept dolfinx::fem::FEkernel Generating XML output for concept dolfinx::fem::impl::FetchCells Generating XML output for concept dolfinx::fem::MDSpan Generating XML output for concept dolfinx::la::MatSet Generating XML output for concept dolfinx::mesh::MarkerFn Generating XML output for concept dolfinx::scalar Generating XML output for namespace @104 Generating XML output for namespace @108 Generating XML output for namespace @110 Generating XML output for namespace @112 Generating XML output for namespace @117 Generating XML output for namespace @122 Generating XML output for namespace @13 Generating XML output for namespace @33 Generating XML output for namespace @36 Generating XML output for namespace @38 Generating XML output for namespace @4 Generating XML output for namespace @44 Generating XML output for namespace @63 Generating XML output for namespace @67 Generating XML output for namespace @69 Generating XML output for namespace @71 Generating XML output for namespace @74 Generating XML output for namespace @78 Generating XML output for namespace @80 Generating XML output for namespace @84 Generating XML output for namespace basix Generating XML output for namespace biharmonic Generating XML output for namespace dolfinx Generating XML output for namespace dolfinx::common Generating XML output for namespace dolfinx::fem Generating XML output for namespace dolfinx::fem::impl Generating XML output for namespace dolfinx::fem::petsc Generating XML output for namespace dolfinx::fem::sparsitybuild Generating XML output for namespace dolfinx::geometry Generating XML output for namespace dolfinx::geometry::impl Generating XML output for namespace dolfinx::geometry::impl_bb Generating XML output for namespace dolfinx::geometry::impl_gjk Generating XML output for namespace dolfinx::graph Generating XML output for namespace dolfinx::graph::build Generating XML output for namespace dolfinx::graph::kahip Generating XML output for namespace dolfinx::graph::parmetis Generating XML output for namespace dolfinx::graph::scotch Generating XML output for namespace dolfinx::io Generating XML output for namespace dolfinx::io::adios2_writer Generating XML output for namespace dolfinx::io::cells Generating XML output for namespace dolfinx::io::hdf5 Generating XML output for namespace dolfinx::io::impl Generating XML output for namespace dolfinx::io::impl_adios2 Generating XML output for namespace dolfinx::io::impl_fides Generating XML output for namespace dolfinx::io::impl_vtx Generating XML output for namespace dolfinx::io::xdmf_function Generating XML output for namespace dolfinx::io::xdmf_mesh Generating XML output for namespace dolfinx::io::xdmf_utils Generating XML output for namespace dolfinx::la Generating XML output for namespace dolfinx::la::impl Generating XML output for namespace dolfinx::la::petsc Generating XML output for namespace dolfinx::la::petsc::options Generating XML output for namespace dolfinx::math Generating XML output for namespace dolfinx::mesh Generating XML output for namespace dolfinx::mesh::impl Generating XML output for namespace dolfinx::MPI Generating XML output for namespace dolfinx::nls Generating XML output for namespace dolfinx::nls::petsc Generating XML output for namespace dolfinx::refinement Generating XML output for namespace dolfinx::refinement::impl Generating XML output for namespace dolfinx::refinement::interval Generating XML output for namespace dolfinx::refinement::plaza Generating XML output for namespace dolfinx::refinement::plaza::impl Generating XML output for namespace hyperelasticity Generating XML output for namespace linalg Generating XML output for namespace mixed_codim0 Generating XML output for namespace poisson Generating XML output for namespace pugi Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py Generating XML output for file hyperelasticity.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md Generating XML output for file defines.cpp Generating XML output for file defines.h Generating XML output for file dolfinx_common.h Generating XML output for file dolfinx_doc.h Generating XML output for file IndexMap.cpp Generating XML output for file IndexMap.h Generating XML output for file log.cpp Generating XML output for file log.h Generating XML output for file math.h Generating XML output for file MPI.cpp Generating XML output for file MPI.h Generating XML output for file Scatterer.h Generating XML output for file sort.h Generating XML output for file Table.cpp Generating XML output for file Table.h Generating XML output for file TimeLogger.cpp Generating XML output for file TimeLogger.h Generating XML output for file TimeLogManager.cpp Generating XML output for file TimeLogManager.h Generating XML output for file Timer.cpp Generating XML output for file Timer.h Generating XML output for file timing.cpp Generating XML output for file timing.h Generating XML output for file types.h Generating XML output for file dolfinx.h Generating XML output for file assemble_matrix_impl.h Generating XML output for file assemble_scalar_impl.h Generating XML output for file assemble_vector_impl.h Generating XML output for file assembler.h Generating XML output for file Constant.h Generating XML output for file CoordinateElement.cpp Generating XML output for file CoordinateElement.h Generating XML output for file DirichletBC.cpp Generating XML output for file DirichletBC.h Generating XML output for file discreteoperators.h Generating XML output for file DofMap.cpp Generating XML output for file DofMap.h Generating XML output for file dofmapbuilder.cpp Generating XML output for file dofmapbuilder.h Generating XML output for file dolfinx_fem.h Generating XML output for file ElementDofLayout.cpp Generating XML output for file ElementDofLayout.h Generating XML output for file Expression.h Generating XML output for file FiniteElement.cpp Generating XML output for file FiniteElement.h Generating XML output for file Form.h Generating XML output for file Function.h Generating XML output for file FunctionSpace.h Generating XML output for file interpolate.h Generating XML output for file petsc.cpp Generating XML output for file petsc.cpp Generating XML output for file petsc.h Generating XML output for file petsc.h Generating XML output for file sparsitybuild.cpp Generating XML output for file sparsitybuild.h Generating XML output for file traits.h Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h Generating XML output for file AdjacencyList.h Generating XML output for file dolfinx_graph.h Generating XML output for file ordering.cpp Generating XML output for file ordering.h Generating XML output for file partition.cpp Generating XML output for file partition.h Generating XML output for file partitioners.cpp Generating XML output for file partitioners.h Generating XML output for file ADIOS2Writers.cpp Generating XML output for file ADIOS2Writers.h Generating XML output for file cells.cpp Generating XML output for file cells.h Generating XML output for file dolfinx_io.h Generating XML output for file HDF5Interface.cpp Generating XML output for file HDF5Interface.h Generating XML output for file vtk_utils.cpp Generating XML output for file vtk_utils.h Generating XML output for file VTKFile.cpp Generating XML output for file VTKFile.h Generating XML output for file xdmf_function.cpp Generating XML output for file xdmf_function.h Generating XML output for file xdmf_mesh.cpp Generating XML output for file xdmf_mesh.h Generating XML output for file xdmf_utils.cpp Generating XML output for file xdmf_utils.h Generating XML output for file XDMFFile.cpp Generating XML output for file XDMFFile.h Generating XML output for file dolfinx_la.h Generating XML output for file matrix_csr_impl.h Generating XML output for file MatrixCSR.h Generating XML output for file slepc.cpp Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp Generating XML output for file SparsityPattern.h Generating XML output for file Vector.h Generating XML output for file cell_types.cpp Generating XML output for file cell_types.h Generating XML output for file dolfinx_mesh.h Generating XML output for file generation.h Generating XML output for file Geometry.h Generating XML output for file graphbuild.cpp Generating XML output for file graphbuild.h Generating XML output for file Mesh.h Generating XML output for file MeshTags.h Generating XML output for file permutationcomputation.cpp Generating XML output for file permutationcomputation.h Generating XML output for file Topology.cpp Generating XML output for file Topology.h Generating XML output for file topologycomputation.cpp Generating XML output for file topologycomputation.h Generating XML output for file dolfinx_nls.h Generating XML output for file NewtonSolver.cpp Generating XML output for file NewtonSolver.h Generating XML output for file dolfinx_refinement.h Generating XML output for file interval.h Generating XML output for file option.h Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/ Generating XML output for the main page Running plantuml with JAVA... Running dot... Generating dot graphs using 43 parallel threads... 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(cd python/doc; \ mkdir -p build/pkgconfig; \ cp /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc build/pkgconfig; \ sed "s|prefix=/usr|prefix=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr|" -i build/pkgconfig/dolfinx_real.pc; \ PYTHONPATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/python3.12/dist-packages \ PKG_CONFIG_PATH=`pwd`/build/pkgconfig:${PKG_CONFIG_PATH} \ LD_LIBRARY_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/:${LD_LIBRARY_PATH} \ XDG_CACHE_HOME=`pwd`/build \ RDMAV_FORK_SAFE=1 \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v7.4.7 Matplotlib created a temporary cache directory at /tmp/matplotlib-smab86t2 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. TNT degree 2 error: 0.0029421918345155706 TNT degree 2 error: 0.00017118942553986645 TNT degree 3 error: 8.385106828741018e-06 TNT degree 4 error: 3.3949902024131903e-07 TNT degree 5 error: 1.2528243192173552e-08 TNT degree 6 error: 4.2427763620456416e-10 TNT degree 7 error: 1.9821407338629663e-10 TNT degree 8 error: 2.9565584931620583e-10 Q degree 1 error: 0.04076382001057708 Q degree 2 error: 0.002918221339526902 Q degree 3 error: 0.00015944660110819777 Q degree 4 error: 7.937421445106529e-06 Q degree 5 error: 3.1034668624612296e-07 Q degree 6 error: 1.1356498984352308e-08 Q degree 7 error: 3.416145918786947e-10 Q degree 8 error: 6.190884454572778e-11 Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 loading translations [en]... done making output directory... done [autosummary] generating autosummary for: api.rst, contributing.rst, demos.rst, demos/demo_axis.md, demos/demo_biharmonic.md, demos/demo_cahn-hilliard.md, demos/demo_elasticity.md, demos/demo_gmsh.md, demos/demo_half_loaded_waveguide.md, demos/demo_hdg.md, ..., demos/demo_pyvista.md, demos/demo_scattering_boundary_conditions.md, demos/demo_static-condensation.md, demos/demo_stokes.md, demos/demo_tnt-elements.md, demos/demo_types.md, developer.rst, index.rst, installation.rst, styleguide_cpp.rst [autosummary] generating autosummary for: /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.log.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.mesh.rst, ..., /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.gmshio.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.jit.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.mesh.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.nls.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.pkgconfig.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.plot.rst myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'dollarmath'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 29 source files that are out of date updating environment: [new config] 54 added, 0 changed, 0 removed reading sources... [ 2%] api reading sources... [ 4%] contributing reading sources... [ 6%] demos reading sources... [ 7%] demos/demo_axis reading sources... [ 9%] demos/demo_biharmonic reading sources... [ 11%] demos/demo_cahn-hilliard reading sources... [ 13%] demos/demo_elasticity reading sources... [ 15%] demos/demo_gmsh reading sources... [ 17%] demos/demo_half_loaded_waveguide reading sources... [ 19%] demos/demo_hdg reading sources... [ 20%] demos/demo_helmholtz reading sources... [ 22%] demos/demo_interpolation-io reading sources... [ 24%] demos/demo_lagrange_variants reading sources... [ 26%] demos/demo_mixed-poisson reading sources... [ 28%] demos/demo_navier-stokes reading sources... [ 30%] demos/demo_pml reading sources... [ 31%] demos/demo_poisson reading sources... [ 33%] demos/demo_poisson_matrix_free reading sources... [ 35%] demos/demo_pyamg reading sources... [ 37%] demos/demo_pyvista reading sources... [ 39%] demos/demo_scattering_boundary_conditions reading sources... [ 41%] demos/demo_static-condensation reading sources... [ 43%] demos/demo_stokes reading sources... [ 44%] demos/demo_tnt-elements reading sources... [ 46%] demos/demo_types reading sources... [ 48%] developer reading sources... [ 50%] generated/dolfinx.common reading sources... [ 52%] generated/dolfinx.cpp.common reading sources... [ 54%] generated/dolfinx.cpp.fem reading sources... [ 56%] generated/dolfinx.cpp.fem.petsc reading sources... [ 57%] generated/dolfinx.cpp.geometry reading sources... [ 59%] generated/dolfinx.cpp.graph reading sources... [ 61%] generated/dolfinx.cpp.io reading sources... [ 63%] generated/dolfinx.cpp.la reading sources... [ 65%] generated/dolfinx.cpp.log reading sources... [ 67%] generated/dolfinx.cpp.mesh reading sources... [ 69%] generated/dolfinx.cpp.nls reading sources... [ 70%] generated/dolfinx.cpp.nls.petsc reading sources... [ 72%] generated/dolfinx.cpp.refinement reading sources... [ 74%] generated/dolfinx.fem reading sources... 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[100%] styleguide_cpp looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_axis.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_axis /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_biharmonic.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_cahn-hilliard.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_cahn-hilliard /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_elasticity.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_elasticity /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_gmsh.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_gmsh /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_half_loaded_waveguide.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_half_loaded_waveguide /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_hdg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_hdg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_helmholtz.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_helmholtz /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_interpolation-io.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_lagrange_variants.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_lagrange_variants /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_mixed-poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_mixed-poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_navier-stokes.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_navier-stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pml.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pml /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyamg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyamg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyvista.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyvista /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_scattering_boundary_conditions.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_scattering_boundary_conditions /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_static-condensation.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_static-condensation /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_stokes.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_tnt-elements.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_tnt-elements /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_types.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_types done preparing documents... done copying assets... copying downloadable files... [ 6%] demos/demo_biharmonic.py copying downloadable files... [ 12%] demos/demo_cahn-hilliard.py copying downloadable files... [ 18%] demos/demo_elasticity.py copying downloadable files... [ 24%] demos/demo_gmsh.py copying downloadable files... [ 29%] demos/demo_hdg.py copying downloadable files... [ 35%] demos/demo_interpolation-io.py copying downloadable files... [ 41%] demos/demo_lagrange_variants.py copying downloadable files... [ 47%] demos/demo_mixed-poisson.py copying downloadable files... [ 53%] demos/demo_mixed-poisson.ipynb copying downloadable files... [ 59%] demos/demo_navier-stokes.py copying downloadable files... [ 65%] demos/demo_poisson.py copying downloadable files... [ 71%] demos/demo_poisson_matrix_free.py copying downloadable files... [ 76%] demos/demo_poisson_matrix_free.ipynb copying downloadable files... [ 82%] demos/demo_pyamg.py copying downloadable files... [ 88%] demos/demo_stokes.py copying downloadable files... [ 94%] demos/demo_tnt-elements.py copying downloadable files... [100%] demos/demo_types.py copying static files... done copying extra files... done copying assets: done writing output... [ 2%] api writing output... [ 4%] contributing writing output... [ 6%] demos writing output... [ 7%] demos/demo_axis writing output... [ 9%] demos/demo_biharmonic writing output... [ 11%] demos/demo_cahn-hilliard writing output... [ 13%] demos/demo_elasticity writing output... [ 15%] demos/demo_gmsh writing output... [ 17%] demos/demo_half_loaded_waveguide writing output... [ 19%] demos/demo_hdg writing output... [ 20%] demos/demo_helmholtz writing output... [ 22%] demos/demo_interpolation-io writing output... [ 24%] demos/demo_lagrange_variants writing output... [ 26%] demos/demo_mixed-poisson writing output... [ 28%] demos/demo_navier-stokes writing output... [ 30%] demos/demo_pml writing output... [ 31%] demos/demo_poisson writing output... [ 33%] demos/demo_poisson_matrix_free writing output... 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[ 70%] generated/dolfinx.cpp.nls.petsc writing output... [ 72%] generated/dolfinx.cpp.refinement writing output... [ 74%] generated/dolfinx.fem writing output... [ 76%] generated/dolfinx.fem.petsc writing output... [ 78%] generated/dolfinx.geometry writing output... [ 80%] generated/dolfinx.graph writing output... [ 81%] generated/dolfinx.io writing output... [ 83%] generated/dolfinx.io.gmshio writing output... [ 85%] generated/dolfinx.jit writing output... [ 87%] generated/dolfinx.la writing output... [ 89%] generated/dolfinx.mesh writing output... [ 91%] generated/dolfinx.nls.petsc writing output... [ 93%] generated/dolfinx.pkgconfig writing output... [ 94%] generated/dolfinx.plot writing output... [ 96%] index writing output... [ 98%] installation writing output... [100%] styleguide_cpp generating indices... genindex py-modindex done highlighting module code... [ 3%] dolfinx.common highlighting module code... [ 7%] dolfinx.cpp.common highlighting module code... [ 10%] dolfinx.cpp.fem highlighting module code... [ 14%] dolfinx.cpp.geometry highlighting module code... [ 17%] dolfinx.cpp.graph highlighting module code... [ 21%] dolfinx.cpp.io highlighting module code... [ 24%] dolfinx.cpp.la highlighting module code... [ 28%] dolfinx.cpp.log highlighting module code... [ 31%] dolfinx.cpp.mesh highlighting module code... [ 34%] dolfinx.cpp.nls.petsc highlighting module code... [ 38%] dolfinx.cpp.refinement highlighting module code... [ 41%] dolfinx.fem highlighting module code... [ 45%] dolfinx.fem.assemble highlighting module code... [ 48%] dolfinx.fem.bcs highlighting module code... [ 52%] dolfinx.fem.dofmap highlighting module code... [ 55%] dolfinx.fem.element highlighting module code... [ 59%] dolfinx.fem.forms highlighting module code... [ 62%] dolfinx.fem.function highlighting module code... [ 66%] dolfinx.fem.petsc highlighting module code... [ 69%] dolfinx.geometry highlighting module code... [ 72%] dolfinx.graph highlighting module code... [ 76%] dolfinx.io.gmshio highlighting module code... [ 79%] dolfinx.io.utils highlighting module code... [ 83%] dolfinx.jit highlighting module code... [ 86%] dolfinx.la highlighting module code... [ 90%] dolfinx.mesh highlighting module code... [ 93%] dolfinx.nls.petsc highlighting module code... [ 97%] dolfinx.pkgconfig highlighting module code... [100%] dolfinx.plot writing additional pages... search done copying images... [ 17%] demos/demo_lagrange_variants_equispaced_10.png copying images... [ 33%] demos/demo_lagrange_variants_gll_10.png copying images... [ 50%] demos/demo_lagrange_variants_interpolation_equispaced.png copying images... [ 67%] demos/demo_lagrange_variants_interpolation_gll_warped.png copying images... [ 83%] demos/demo_tnt-elements_degrees_vs_error.png copying images... [100%] demos/demo_tnt-elements_ndofs_vs_error.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in .pybuild/html. dh_numpy3 -i make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -a sed "s/set(CMAKE_IMPORT_FILE_VERSION 1)/set(CMAKE_IMPORT_FILE_VERSION 1)\n\nif(PETSC_SCALAR_COMPLEX)\n set(LIB_NAME_EXT \"_complex\")\nelse()\n set(LIB_NAME_EXT \"_real\")\nendif()/; \ s/libdolfinx_real.so/libdolfinx\${LIB_NAME_EXT}.so/g" \ -i debian/libdolfinx-dev/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex dh_installdocs -O--buildsystem=cmake dh_installdocs: warning: Cannot auto-detect main package for dolfinx-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -a dh_numpy3 -a mkdir -p debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib mv debian/python3-dolfinx-real/usr/lib/python3 debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib rm -rf debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfinx_utils mkdir -p debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib mv debian/python3-dolfinx-complex/usr/lib/python3 debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib rm -rf debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/dolfinx_utils make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex E: dh_python3 dh_python3:198: no package to act on (python3-foo or one with ${python3:Depends} in Depends) dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_compress -X.py -X.cpp -X.h -X.pdf -X.ufl make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_dwz -Xcpp.cpython make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_strip make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_strip --package=libdolfinx-real0.9 -Xcomplex -Xpython dh_strip --package=libdolfinx-complex0.9 -Xreal -Xpython dh_strip --package=python3-dolfinx-real make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' echo "python3-petsc4py-real:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/python3-dolfinx-real.substvars echo "python3-petsc4py-complex:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-complex (>= 3.21), python3-petsc4py-complex (<< 3.22), python3-slepc4py-complex (>= 3.21), python3-slepc4py-complex (<< 3.22)" >> debian/python3-dolfinx-complex.substvars echo "python-petsc4py-alt:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/libdolfinx-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.21-dev, libslepc-real3.21-dev" -Vpetsc-complex:Depends="libpetsc-complex3.21-dev, libslepc-complex3.21-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ \ -Vnanobind:Upstream-Version=2.2 -Vnanobind:Next-Upstream-Version=3 dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-2_amd64.deb'. dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/500505 and its subdirectories I: Current time: Sun Dec 14 23:03:22 -12 2025 I: pbuilder-time-stamp: 1765796602 Tue Nov 12 04:40:24 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Tue Nov 12 04:40:24 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Tue Nov 12 04:40:24 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Tue Nov 12 04:40:24 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-TlJBLy' ==================================================================================== Tue Nov 12 04:40:26 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "2 fenics-dolfinx unstable /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl 1:0.9.0-2" as arguments. Tue Nov 12 04:40:26 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-v66hVeZi" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Nov 12 04:40:26 UTC 2024 I: Downloading source for unstable/fenics-dolfinx=1:0.9.0-2 Reading package lists... NOTICE: 'fenics-dolfinx' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git Please use: git clone https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 827 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (dsc) [4211 B] Get:2 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (tar) [778 kB] Get:3 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (diff) [44.8 kB] Fetched 827 kB in 0s (22.5 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'fenics-dolfinx' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git Please use: git clone https://salsa.debian.org/science-team/fenics/fenics-dolfinx.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 827 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (dsc) [4211 B] Get:2 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (tar) [778 kB] Get:3 http://deb.debian.org/debian unstable/main fenics-dolfinx 1:0.9.0-2 (diff) [44.8 kB] Fetched 827 kB in 0s (22.5 MB/s) Download complete and in download only mode ============================================================================= Re-Building fenics-dolfinx in unstable on amd64 on ionos1-amd64 now. Date: Tue Nov 12 04:40:26 UTC 2024 Date UTC: Tue Nov 12 04:40:26 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_kRsm + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' fenics-dolfinx = debian-installer -o fenics-dolfinx = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' fenics-dolfinx = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_kRsm --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Tue Nov 12 18:40:27 +14 2024 I: pbuilder-time-stamp: 1731386427 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenics-dolfinx_0.9.0-2.dsc] I: copying [./fenics-dolfinx_0.9.0.orig.tar.gz] I: copying [./fenics-dolfinx_0.9.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Nov 10 08:47:12 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenics-dolfinx_0.9.0-2.dsc: no acceptable signature found dpkg-source: info: extracting fenics-dolfinx in fenics-dolfinx-0.9.0 dpkg-source: info: unpacking fenics-dolfinx_0.9.0.orig.tar.gz dpkg-source: info: unpacking fenics-dolfinx_0.9.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying extra_CXXFLAGS.patch dpkg-source: info: applying python_cmake_module_path.patch dpkg-source: info: applying lib_rename.patch dpkg-source: info: applying python_unit_test_32bit.patch dpkg-source: info: applying docs_local_mathjax.patch dpkg-source: info: applying debian_version_id.patch dpkg-source: info: applying demo_no_vtk_adios2.patch dpkg-source: info: applying adios_config_mpi.patch dpkg-source: info: applying big_endian_skip_adios2_tests.patch dpkg-source: info: applying python_local_license.patch dpkg-source: info: applying pusimp.patch dpkg-source: info: applying drop_Werror.patch dpkg-source: info: applying demo_stokes_mumps_instead_of_superlu_dist.patch dpkg-source: info: applying test_adios2_skip.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D01_modify_environment starting debug: Running on ionos1-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 12 04:40 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=c8cee752593048ff9f6b8a0f8fa67e09 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3252912 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_kRsm --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-2.dsc' SUDO_GID=110 SUDO_UID=105 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), dh-python, gfortran, catch2 (>= 3~), chrpath, libbasix-dev (>= 0.9.0~), python3-basix, libboost-chrono-dev, libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-math-dev, libboost-mpi-dev, libboost-program-options-dev, libboost-serialization-dev, libboost-thread-dev, libboost-timer-dev, libeigen3-dev, libhdf5-mpi-dev, libadios2-mpi-c++11-dev, libpugixml-dev, libsuitesparse-dev, libscotch-dev, libxml2-dev, mpi-default-dev, libpetsc-real-dev, libpetsc-complex-dev, libslepc-real-dev, libslepc-complex-dev, python3-setuptools, pybuild-plugin-pyproject, python3-petsc4py, python3-petsc4py-real, python3-petsc4py-complex, python3-slepc4py, python3-slepc4py-real, python3-slepc4py-complex, pkgconf, python3-all-dev, python3-cffi, python3-pkg-resources, python3-ffcx (>= 1:0.9.0~), python3-ffcx (<< 1:0.10.0), python3-ufl (>= 2024.2.0~), python3-mpi4py, python3-nanobind (>= 2.0.0~), python3-numpy (>= 1:1.21~), python3-pip, python3-ply, python3-pytest, python3-pusimp (>= 0.1.1~), python3-requests, python3-scikit-build-core, python3-scipy, python3-sphinx, python3-virtualenv, libspdlog-dev, doxygen, graphviz, libjs-mathjax, libjs-modernizr, python3-jupytext, python3-matplotlib, python3-myst-parser, python3-sphinx-rtd-theme dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on catch2 (>= 3~); however: Package catch2 is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on libbasix-dev (>= 0.9.0~); however: Package libbasix-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-basix; however: Package python3-basix is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono-dev; however: Package libboost-chrono-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-math-dev; however: Package libboost-math-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-mpi-dev; however: Package libboost-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-serialization-dev; however: Package libboost-serialization-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libadios2-mpi-c++11-dev; however: Package libadios2-mpi-c++11-dev is not installed. pbuilder-satisfydepends-dummy depends on libpugixml-dev; however: Package libpugixml-dev is not installed. pbuilder-satisfydepends-dummy depends on libsuitesparse-dev; however: Package libsuitesparse-dev is not installed. pbuilder-satisfydepends-dummy depends on libscotch-dev; however: Package libscotch-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-real-dev; however: Package libpetsc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libpetsc-complex-dev; however: Package libpetsc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-real-dev; however: Package libslepc-real-dev is not installed. pbuilder-satisfydepends-dummy depends on libslepc-complex-dev; however: Package libslepc-complex-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py; however: Package python3-petsc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-real; however: Package python3-petsc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-petsc4py-complex; however: Package python3-petsc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py; however: Package python3-slepc4py is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-real; however: Package python3-slepc4py-real is not installed. pbuilder-satisfydepends-dummy depends on python3-slepc4py-complex; however: Package python3-slepc4py-complex is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-cffi; however: Package python3-cffi is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (>= 1:0.9.0~); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx (<< 1:0.10.0); however: Package python3-ffcx is not installed. pbuilder-satisfydepends-dummy depends on python3-ufl (>= 2024.2.0~); however: Package python3-ufl is not installed. pbuilder-satisfydepends-dummy depends on python3-mpi4py; however: Package python3-mpi4py is not installed. pbuilder-satisfydepends-dummy depends on python3-nanobind (>= 2.0.0~); however: Package python3-nanobind is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1:1.21~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-ply; however: Package python3-ply is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pusimp (>= 0.1.1~); however: Package python3-pusimp is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-scikit-build-core; however: Package python3-scikit-build-core is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-virtualenv; however: Package python3-virtualenv is not installed. pbuilder-satisfydepends-dummy depends on libspdlog-dev; however: Package libspdlog-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on libjs-modernizr; however: Package libjs-modernizr is not installed. pbuilder-satisfydepends-dummy depends on python3-jupytext; however: Package python3-jupytext is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} catch2{a} chrpath{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} graphviz{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libabsl20230802{a} libadios2-common-c++11-dev{a} libadios2-common-core-dev{a} libadios2-mpi-auxiliary-2.10{a} libadios2-mpi-auxiliary-dev{a} libadios2-mpi-c++11-2.10{a} libadios2-mpi-c++11-dev{a} libadios2-mpi-core-2.10{a} libadios2-mpi-core-dev{a} libadios2-mpi-plugins{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamd3{a} libamdhip64-5{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libavif16{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} 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libhypre-dev{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libimagequant0{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-modernizr{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblab-gamut1{a} liblapack-dev{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libmunge2{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenjp2-7{a} libopenmpi-dev{a} libopenmpi3t64{a} libp11-kit-dev{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpathplan4{a} libpciaccess0{a} libpetsc-complex-dev{a} libpetsc-complex3.21{a} libpetsc-complex3.21-dev{a} libpetsc-real-dev{a} libpetsc-real3.21{a} libpetsc-real3.21-dev{a} libpetsc3.21-dev-common{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libscotch-dev{a} libsharpyuv0{a} libslepc-complex-dev{a} libslepc-complex3.21{a} libslepc-complex3.21-dev{a} libslepc-real-dev{a} libslepc-real3.21{a} libslepc-real3.21-dev{a} libsm6{a} libsodium23{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsvtav1enc2{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libyaml-cpp0.8{a} libyaml-dev{a} libyuv0{a} libz3-4{a} libzmq5{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} nanobind-dev{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python-petsc4py-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-basix{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-cffi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-distlib{a} python3-docutils{a} python3-fastjsonschema{a} python3-ffcx{a} python3-filelock{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-jupytext{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-more-itertools{a} python3-mpi4py{a} python3-mpmath{a} python3-myst-parser{a} python3-nanobind{a} python3-nbformat{a} python3-numpy{a} python3-packaging{a} python3-pathspec{a} python3-petsc4py{a} python3-petsc4py-complex{a} python3-petsc4py-complex3.21{a} python3-petsc4py-real{a} python3-petsc4py-real3.21{a} python3-pil{a} python3-pil.imagetk{a} python3-pip{a} python3-pip-whl{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-ply{a} python3-pusimp{a} python3-pycparser{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-scikit-build-core{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-whl{a} python3-six{a} python3-slepc4py{a} python3-slepc4py-complex{a} python3-slepc4py-complex3.21{a} python3-slepc4py-real{a} python3-slepc4py-real3.21{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tk{a} python3-toml{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufl{a} python3-ufolib2{a} python3-urllib3{a} python3-virtualenv{a} python3-wheel{a} python3-wheel-whl{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} robin-map-dev{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} swig{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} valgrind{a} valgrind-mpi{a} x11-common{a} x11proto-dev{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation gdb isympy-common javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libglib2.0-data libgraphblas-dev libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libpetsc3.21-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix python3-bs4 python3-cssselect python3-html5lib python3-json-pointer python3-olefile python3-rfc3987 python3-uritemplate python3-webcolors shared-mime-info wget xauth xdg-user-dirs zsh 0 packages upgraded, 543 newly installed, 0 to remove and 0 not upgraded. Need to get 446 MB of archives. After unpacking 2002 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 13 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-10 [97.2 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 69 http://deb.debian.org/debian unstable/main amd64 libcatch2-dev amd64 3.7.1-0.4 [613 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 catch2 all 3.7.1-0.4 [5052 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.18-1 [13.5 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.30.5-1 [2223 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2 [699 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-2 [81.6 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.30.5-1 [11.4 MB] Get: 88 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.1-1+b1 [54.8 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-1 [26.0 MB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libclang-cpp19 amd64 1:19.1.3-1 [13.2 MB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libclang1-19 amd64 1:19.1.3-1 [7616 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libfmt10 amd64 10.1.1+ds1-4 [127 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b3 [5011 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB] Get: 128 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get: 130 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Get: 131 http://deb.debian.org/debian unstable/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libcdt5 amd64 2.42.4-2+b1 [40.5 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libcgraph6 amd64 2.42.4-2+b1 [64.2 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.11.0~rc1-1 [1879 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-2+b2 [350 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-7+b2 [936 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.2.1+dfsg-2 [2173 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1888.20241107-1 [172 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.3-1 [11.2 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [15.0 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.3-1 [489 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [223 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [54.2 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [35.2 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libpathplan4 amd64 2.42.4-2+b1 [42.8 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libgvc6 amd64 2.42.4-2+b1 [685 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libgvpr2 amd64 2.42.4-2+b1 [193 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 liblab-gamut1 amd64 2.42.4-2+b1 [198 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 graphviz amd64 2.42.4-2+b1 [616 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-3 [59.5 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-3 [41.7 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-3 [42.0 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-3 [53.5 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-3 [126 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libadios2-common-c++11-dev all 2.10.1+dfsg1-12 [25.3 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libadios2-common-core-dev amd64 2.10.1+dfsg1-12 [123 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-2.10 amd64 2.10.1+dfsg1-12 [402 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-auxiliary-dev amd64 2.10.1+dfsg1-12 [22.8 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.3-2+b1 [662 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 212 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 213 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 214 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 5.0.5-3 [2007 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 225 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-103-1t64 amd64 1.10.10+repack-4 [1312 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libpugixml1v5 amd64 1.14-2 [88.6 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libyaml-cpp0.8 amd64 0.8.0+dfsg-6+b2 [133 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b1 [221 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-plugins amd64 2.10.1+dfsg1-12 [14.7 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-2.10 amd64 2.10.1+dfsg1-12 [1733 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-2.10 amd64 2.10.1+dfsg1-12 [206 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-core-dev amd64 2.10.1+dfsg1-12 [79.3 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libadios2-mpi-c++11-dev amd64 2.10.1+dfsg1-12 [10.8 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.8.3+dfsg-2 [23.8 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.8.3+dfsg-2 [40.7 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-1.1+b2 [104 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-3+b1 [161 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-3+b1 [4990 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-1.1+b2 [119 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libbasix0.9 amd64 0.9.0-2 [409 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libbasix-dev amd64 0.9.0-2 [66.9 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-3.2 [10.6 MB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-3.2 [234 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-3.2 [235 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-3.2 [240 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-3.2 [245 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 259 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3.2 [333 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-3.2 [372 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-3.2 [239 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2 [281 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-3.2 [231 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-3.2 [297 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-3.2 [329 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-3.2 [346 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-3.2 [261 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 274 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-3.2 [523 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-3.2 [569 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 277 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-3.2 [271 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.5-3 [95.0 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.3-2+b1 [3958 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.5-3 [168 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.5-3 [1087 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.17 [3148 B] Get: 296 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-3.2 [290 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 298 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-3.2 [347 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-3.2 [375 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 301 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 302 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2 [269 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-3.2 [276 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 305 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-3.2 [235 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-3.2 [236 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 308 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b5 [316 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 libbtf2 amd64 1:7.8.3+dfsg-2 [24.7 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 libc6-dbg amd64 2.40-3 [7097 kB] Get: 311 http://deb.debian.org/debian unstable/main amd64 libcamd3 amd64 1:7.8.3+dfsg-2 [37.5 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libccolamd3 amd64 1:7.8.3+dfsg-2 [39.2 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.8.3+dfsg-2 [32.5 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 libcholmod5 amd64 1:7.8.3+dfsg-2 [638 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 libcombblas2.0.0t64 amd64 2.0.0-6 [264 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-3 [15.7 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.5.18+dfsg-3+b1 [303 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b2 [642 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.8-2 [449 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.8-2 [449 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-2+b1 [208 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.8-2 [1391 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 333 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 334 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.11.0-1 [461 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libcxsparse4 amd64 1:7.8.3+dfsg-2 [84.2 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 337 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2 [781 kB] Get: 338 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2 [347 kB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2 [617 kB] Get: 340 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2 [809 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2 [51.0 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2 [2113 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi3 amd64 3.3.10-2 [62.8 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libfftw3-mpi-dev amd64 3.3.10-2 [67.3 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libfmt-dev amd64 10.1.1+ds1-4 [177 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-102t64 amd64 1.10.10+repack-4 [90.7 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 348 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-100t64 amd64 1.10.10+repack-4 [40.7 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-103-1t64 amd64 1.10.10+repack-4 [131 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-100t64 amd64 1.10.10+repack-4 [21.4 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 1.10.10+repack-4 [2717 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 1.10.10+repack-4 [15.6 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libmetis5 amd64 5.1.0.dfsg-7+b2 [176 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libptscotch-7.0 amd64 7.0.5-1 [656 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist8 amd64 8.2.1+dfsg1-5 [610 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libhypre-2.31.0 amd64 2.31.0-3 [1710 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.0+dfsg1-2 [174 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.0+dfsg1-2 [21.9 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libhypre-dev amd64 2.31.0-3 [1974 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 libjs-modernizr all 3.13.0-0.1 [191 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libklu2 amd64 1:7.8.3+dfsg-2 [90.6 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libldl3 amd64 1:7.8.3+dfsg-2 [24.5 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get: 372 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi2.2 amd64 2.2.1-5 [1578 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libmumps-5.7 amd64 5.7.3-3 [1965 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libmumps-headers-dev all 5.7.3-3 [36.3 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libscalapack-openmpi-dev amd64 2.2.1-5 [10.7 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libscalapack-mpi-dev amd64 2.2.1-5 [5888 B] Get: 377 http://deb.debian.org/debian unstable/main amd64 libmumps-dev amd64 5.7.3-3 [1861 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libparpack2t64 amd64 3.9.1-1.1+b2 [99.3 kB] Get: 380 http://deb.debian.org/debian unstable/main amd64 libparpack2-dev amd64 3.9.1-1.1+b2 [110 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libumfpack6 amd64 1:7.8.3+dfsg-2 [280 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libparu1 amd64 1:7.8.3+dfsg-2 [65.1 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libspqr4 amd64 1:7.8.3+dfsg-2 [146 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.21 amd64 3.21.6+dfsg1-2 [7277 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-mongoose3 amd64 1:7.8.3+dfsg-2 [47.3 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 librbio4 amd64 1:7.8.3+dfsg-2 [39.9 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libspex3 amd64 1:7.8.3+dfsg-2 [59.9 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libsuitesparse-dev amd64 1:7.8.3+dfsg-2 [1476 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libscotch-7.0 amd64 7.0.5-1 [411 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 libscotch-dev amd64 7.0.5-1 [1574 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 libptscotch-dev amd64 7.0.5-1 [1375 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2024.05.08-1 [49.8 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b2 [8672 B] Get: 396 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dist-dev amd64 8.2.1+dfsg1-5 [903 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.2-3+b2 [40.8 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 libyaml-dev amd64 0.2.5-1+b2 [63.5 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 libpetsc3.21-dev-common all 3.21.6+dfsg1-2 [309 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 valgrind amd64 1:3.20.0-2.1 [14.3 MB] Get: 407 http://deb.debian.org/debian unstable/main amd64 valgrind-mpi amd64 1:3.20.0-2.1 [123 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex3.21-dev amd64 3.21.6+dfsg1-2 [7010 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libpetsc-complex-dev all 3.21.6+dfsg1-2 [12.5 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.21 amd64 3.21.6+dfsg1-2 [7057 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libpetsc-real3.21-dev amd64 3.21.6+dfsg1-2 [7053 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libpetsc-real-dev all 3.21.6+dfsg1-2 [12.5 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libpugixml-dev amd64 1.14-2 [109 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-3 [2153 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-3 [5124 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B] Get: 417 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B] Get: 418 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.21 amd64 3.21.2+dfsg1-2 [1252 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 libslepc-complex3.21-dev amd64 3.21.2+dfsg1-2 [5707 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 libslepc-complex-dev amd64 3.21.2+dfsg1-2 [15.3 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.21 amd64 3.21.2+dfsg1-2 [1219 kB] Get: 423 http://deb.debian.org/debian unstable/main amd64 libslepc-real3.21-dev amd64 3.21.2+dfsg1-2 [5702 kB] Get: 424 http://deb.debian.org/debian unstable/main amd64 libslepc-real-dev amd64 3.21.2+dfsg1-2 [15.3 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 libspdlog1.12 amd64 1:1.12.0+ds-2+b3 [104 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 libspdlog-dev amd64 1:1.12.0+ds-2+b3 [85.5 kB] Get: 427 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.2 [793 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 robin-map-dev all 1.3.0-1 [29.8 kB] Get: 432 http://deb.debian.org/debian unstable/main amd64 nanobind-dev all 2.2.0-1 [159 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-4 [731 kB] Get: 443 http://deb.debian.org/debian unstable/main amd64 python-petsc4py-doc all 3.21.6-2 [771 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 446 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-3 [505 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B] Get: 449 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 python3-ufl all 2024.2.0-2 [150 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 python3-basix amd64 0.9.0-2 [132 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b5 [318 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 458 http://deb.debian.org/debian unstable/main amd64 python3-cffi-backend amd64 1.17.1-2 [87.5 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 python3-ply all 3.11-7 [62.6 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 python3-pycparser all 2.22-2 [78.0 kB] Get: 461 http://deb.debian.org/debian unstable/main amd64 python3-cffi all 1.17.1-2 [89.4 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1 [118 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2 [215 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 466 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-distlib all 0.3.9-1 [257 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 python3-filelock all 3.16.1-1 [12.6 kB] Get: 475 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 477 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get: 479 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.54.1-4 [1429 kB] Get: 485 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 487 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 488 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 python3-rpds-py amd64 0.20.1-1 [252 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 python3-referencing all 0.35.1-1 [23.5 kB] Get: 492 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 493 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 495 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 496 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 497 http://deb.debian.org/debian unstable/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get: 498 http://deb.debian.org/debian unstable/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 499 http://deb.debian.org/debian unstable/main amd64 python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 500 http://deb.debian.org/debian unstable/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 501 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-1 [134 kB] Get: 502 http://deb.debian.org/debian unstable/main amd64 python3-jupytext all 1.16.1+ds1-2 [87.2 kB] Get: 503 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2 [60.9 kB] Get: 504 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get: 505 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-3 [112 kB] Get: 506 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-1 [103 kB] Get: 507 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get: 508 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get: 509 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 510 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get: 511 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.0.0-9 [742 kB] Get: 512 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 513 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 514 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 515 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 516 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-4 [588 kB] Get: 517 http://deb.debian.org/debian unstable/main amd64 python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 518 http://deb.debian.org/debian unstable/main amd64 python3-nanobind all 2.2.0-1 [39.4 kB] Get: 519 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 520 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Get: 521 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real3.21 amd64 3.21.6-2 [1235 kB] Get: 522 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-real all 3.21.6-2 [10.5 kB] Get: 523 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex3.21 amd64 3.21.6-2 [1236 kB] Get: 524 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py-complex all 3.21.6-2 [10.5 kB] Get: 525 http://deb.debian.org/debian unstable/main amd64 python3-petsc4py all 3.21.6-2 [10.7 kB] Get: 526 http://deb.debian.org/debian unstable/main amd64 python3-pip all 24.3.1+dfsg-1 [1441 kB] Get: 527 http://deb.debian.org/debian unstable/main amd64 python3-pip-whl all 24.3.1+dfsg-1 [1501 kB] Get: 528 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 529 http://deb.debian.org/debian unstable/main amd64 python3-pusimp all 0.1.1-1 [10.1 kB] Get: 530 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-metadata all 0.9.0~rc1-1 [20.9 kB] Get: 531 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 532 http://deb.debian.org/debian unstable/main amd64 python3-scikit-build-core all 0.10.7-2 [123 kB] Get: 533 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-whl all 75.2.0-1 [1249 kB] Get: 534 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real3.21 amd64 3.21.2-1 [307 kB] Get: 535 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-real all 3.21.2-1 [6452 B] Get: 536 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex3.21 amd64 3.21.2-1 [306 kB] Get: 537 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py-complex all 3.21.2-1 [6520 B] Get: 538 http://deb.debian.org/debian unstable/main amd64 python3-slepc4py all 3.21.2-1 [6644 B] Get: 539 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 540 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 541 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Get: 542 http://deb.debian.org/debian unstable/main amd64 python3-wheel-whl all 0.44.0-2 [70.1 kB] Get: 543 http://deb.debian.org/debian unstable/main amd64 python3-virtualenv all 20.27.0+ds-1 [71.1 kB] Fetched 446 MB in 19s (23.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. 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Setting up libcatch2-dev (3.7.1-0.4) ... Setting up python3-wheel-whl (0.44.0-2) ... Setting up libdrm-common (2.4.123-1) ... Setting up libyuv0:amd64 (0.0.1888.20241107-1) ... Setting up valgrind-mpi (1:3.20.0-2.1) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:amd64 (72.1-5+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ... Setting up libbrotli-dev:amd64 (1.1.0-2+b5) ... Setting up libfmt10:amd64 (10.1.1+ds1-4) ... Setting up chrpath (0.18-1) ... Setting up libp11-kit-dev:amd64 (0.25.5-2+b1) ... Setting up libblas-dev:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:amd64 (14.2.0-8) ... Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libllvm19:amd64 (1:19.1.3-1) ... Setting up catch2 (3.7.1-0.4) ... Setting up libice6:amd64 (2:1.1.1-1) ... Setting up liblapack3:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libarpack2t64:amd64 (3.9.1-1.1+b2) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-2+b2) ... Setting up libamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libclang1-19 (1:19.1.3-1) ... Setting up libxau-dev:amd64 (1:1.0.11-1) ... Setting up libboost-chrono1.83-dev:amd64 (1.83.0-3.2) ... Setting up libspdlog1.12:amd64 (1:1.12.0+ds-2+b3) ... Setting up libxpm4:amd64 (1:3.5.17-1+b2) ... Setting up nettle-dev:amd64 (3.10-1+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b2) ... Setting up libyaml-dev:amd64 (0.2.5-1+b2) ... Setting up libboost-math1.83-dev:amd64 (1.83.0-3.2) ... Setting up libtool (2.4.7-8) ... Setting up libcolamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libspex3:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-chrono-dev:amd64 (1.83.0.2+b2) ... Setting up libfftw3-bin (3.3.10-2) ... Setting up libsuitesparse-mongoose3:amd64 (1:7.8.3+dfsg-2) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libboost-math-dev:amd64 (1.83.0.2+b2) ... Setting up libwebpdemux2:amd64 (1.4.0-0.1+b1) ... Setting up libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libpugixml-dev:amd64 (1.14-2) ... Setting up libaec-dev:amd64 (1.1.3-1+b1) ... Setting up libcxsparse4:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-serialization1.83-dev:amd64 (1.83.0-3.2) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libboost-filesystem1.83-dev:amd64 (1.83.0-3.2) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libcamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libsuperlu7:amd64 (7.0.0+dfsg1-2) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-8) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:amd64 (2.0.18-1+b1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:amd64 (2.4.7-8) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:amd64 (1:1.1.2-3+b2) ... Setting up libxml2-dev:amd64 (2.12.7+dfsg+really2.9.14-0.2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:amd64 (1.83.0-3.2) ... Setting up libllvm17t64:amd64 (1:17.0.6-18) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up librbio4:amd64 (1:7.8.3+dfsg-2) ... Setting up libboost-date-time1.83-dev:amd64 (1.83.0-3.2) ... Setting up libldap-dev:amd64 (2.5.18+dfsg-3+b1) ... Setting up opencl-clhpp-headers (3.0~2024.05.08-1) ... Setting up liblapack-dev:amd64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libfmt-dev:amd64 (10.1.1+ds1-4) ... Setting up libboost-regex1.83-dev:amd64 (1.83.0-3.2) ... Setting up pkg-config:amd64 (1.8.1-4) ... Setting up libgav1-1:amd64 (0.19.0-2+b2) ... Setting up libboost-serialization-dev:amd64 (1.83.0.2+b2) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.2-1+b2) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libccolamd3:amd64 (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libgvpr2:amd64 (2.42.4-2+b1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libbasix0.9:amd64 (0.9.0-2) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libhwloc-dev:amd64 (2.11.2-1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libsuperlu-dev:amd64 (7.0.0+dfsg1-2) ... Setting up libbasix-dev:amd64 (0.9.0-2) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libfftw3-dev:amd64 (3.3.10-2) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libclang-cpp19 (1:19.1.3-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-3.2) ... Setting up libgnutls28-dev:amd64 (3.8.8-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libcholmod5:amd64 (1:7.8.3+dfsg-2) ... Setting up libxft2:amd64 (2.3.6-1+b2) ... Setting up libarpack2-dev:amd64 (3.9.1-1.1+b2) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libzmq5:amd64 (4.3.5-1+b3) ... Setting up libcurl4t64:amd64 (8.11.0-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up libspqr4:amd64 (1:7.8.3+dfsg-2) ... Setting up python3-pip-whl (24.3.1+dfsg-1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-3.2) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up nanobind-dev (2.2.0-1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-3) ... Setting up python3.12-tk (3.12.7-3) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up libspdlog-dev:amd64 (1:1.12.0+ds-2+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up doxygen (1.9.8+ds-2+b3) ... Setting up libklu2:amd64 (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:amd64 (1.21.3-3) ... Setting up libraqm0:amd64 (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up libpmix2t64:amd64 (5.0.3-2+b1) ... Setting up libumfpack6:amd64 (1:7.8.3+dfsg-2) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up cmake (3.30.5-1) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libpmix-dev:amd64 (5.0.3-2+b1) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-3) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libxmu6:amd64 (2:1.1.3-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up libkdb5-10t64:amd64 (1.21.3-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up python-petsc4py-doc (3.21.6-2) ... Setting up libibverbs-dev:amd64 (52.0-2+b1) ... Setting up libparu1:amd64 (1:7.8.3+dfsg-2) ... Setting up libpython3.12t64:amd64 (3.12.7-3) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-3) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up krb5-multidev:amd64 (1.21.3-3) ... Setting up libsuitesparse-dev:amd64 (1:7.8.3+dfsg-2) ... Setting up python3 (3.12.6-1) ... /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:amd64 (3.12.7-3) ... Setting up python3-distlib (0.3.9-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up libkrb5-dev:amd64 (1.21.3-3) ... Setting up python3-pil:amd64 (10.4.0-1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up libcurl4-openssl-dev:amd64 (8.11.0-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b5) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.7-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pip (24.3.1+dfsg-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.20.1-1) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:amd64 (5.3.0-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-pusimp (0.1.1-1) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-cffi-backend:amd64 (1.17.1-2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (24.2.0-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up python3-nanobind (2.2.0-1) ... Setting up python3-filelock (3.16.1-1) ... Setting up libpython3-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-pyproject-metadata (0.9.0~rc1-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-virtualenv (20.27.0+ds-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up libpython3-all-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.6-1) ... Setting up libopenmpi3t64:amd64 (5.0.5-3) ... Setting up libparpack2t64:amd64 (3.9.1-1.1+b2) ... Setting up libboost-mpi1.83.0 (1.83.0-3.2) ... Setting up openmpi-bin (5.0.5-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpirun.1.gz because associated file /usr/share/man/man1/mpirun.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-all-dev (3.12.6-1) ... Setting up libptscotch-7.0:amd64 (7.0.5-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-scikit-build-core (0.10.7-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-cffi (1.17.1-2) ... Setting up mpi-default-bin (1.17) ... Setting up libcombblas2.0.0t64:amd64 (2.0.0-6) ... Setting up libfftw3-mpi3:amd64 (3.3.10-2) ... Setting up python3-mpi4py (4.0.0-9) ... Setting up libhdf5-openmpi-103-1t64:amd64 (1.10.10+repack-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up libhdf5-openmpi-fortran-102t64:amd64 (1.10.10+repack-4) ... Setting up libhdf5-openmpi-cpp-103-1t64:amd64 (1.10.10+repack-4) ... Setting up python3-contourpy (1.3.0-2) ... Setting up libopenmpi-dev:amd64 (5.0.5-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up libscalapack-openmpi2.2:amd64 (2.2.1-5) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up python3-ufl (2024.2.0-2) ... Setting up libsuperlu-dist8:amd64 (8.2.1+dfsg1-5) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up libfftw3-mpi-dev:amd64 (3.3.10-2) ... Setting up libhdf5-openmpi-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libsuperlu-dist-dev:amd64 (8.2.1+dfsg1-5) ... Setting up libhdf5-openmpi-hl-fortran-100t64:amd64 (1.10.10+repack-4) ... Setting up libmumps-5.7:amd64 (5.7.3-3) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up libhypre-2.31.0:amd64 (2.31.0-3) ... Setting up libscalapack-openmpi-dev:amd64 (2.2.1-5) ... Setting up mpi-default-dev (1.17) ... Setting up libpetsc-complex3.21:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up libhdf5-openmpi-hl-cpp-100t64:amd64 (1.10.10+repack-4) ... Setting up libscalapack-mpi-dev:amd64 (2.2.1-5) ... Setting up libhdf5-openmpi-dev (1.10.10+repack-4) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-basix (0.9.0-2) ... Setting up libmumps-dev:amd64 (5.7.3-3) ... Setting up libscotch-dev (7.0.5-1) ... Setting up libparpack2-dev:amd64 (3.9.1-1.1+b2) ... Setting up libpetsc-real3.21:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up python3-nbformat (5.9.1-1) ... Setting up libhypre-dev:amd64 (2.31.0-3) ... Setting up libptscotch-dev (7.0.5-1) ... Setting up python3-ffcx (1:0.9.0-2) ... Setting up libboost-mpi1.83-dev (1.83.0-3.2) ... Setting up libslepc-complex3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up python3-jupytext (1.16.1+ds1-2) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libhdf5-mpi-dev (1.10.10+repack-4) ... Setting up python3-petsc4py-complex3.21 (3.21.6-2) ... Setting up python3-slepc4py-complex3.21 (3.21.2-1) ... Setting up python3-petsc4py (3.21.6-2) ... Setting up libslepc-real3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up python3-petsc4py-real3.21 (3.21.6-2) ... Setting up python3-petsc4py-real (3.21.6-2) ... Setting up libpetsc3.21-dev-common (3.21.6+dfsg1-2) ... Setting up libpetsc-complex3.21-dev:amd64 (3.21.6+dfsg1-2) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_complex.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc_complex.so (libpetsc_complex.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up python3-slepc4py-real3.21 (3.21.2-1) ... Setting up python3-petsc4py-complex (3.21.6-2) ... Setting up python3-slepc4py-complex (3.21.2-1) ... Setting up libpetsc-real3.21-dev:amd64 (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.21.6 to provide /usr/lib/x86_64-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up libslepc-complex3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_complex.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_complex.so (libslepc_complex.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libpetsc-real-dev (3.21.6+dfsg1-2) ... Setting up libpetsc-complex-dev (3.21.6+dfsg1-2) ... Setting up python3-slepc4py (3.21.2-1) ... Setting up python3-slepc4py-real (3.21.2-1) ... Setting up libslepc-real3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/libslepc_real.so.3.21.2 to provide /usr/lib/x86_64-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libslepc-complex-dev (3.21.2+dfsg1-2) ... Setting up libslepc-real-dev (3.21.2+dfsg1-2) ... Setting up python3-fonttools (4.54.1-4) ... Setting up libadios2-mpi-plugins:amd64 (2.10.1+dfsg1-12) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up libheif-plugin-dav1d:amd64 (1.19.3-1) ... Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... Setting up python3-matplotlib (3.8.3-3) ... Setting up libadios2-mpi-core-2.10:amd64 (2.10.1+dfsg1-12) ... Setting up libheif1:amd64 (1.19.3-1) ... Setting up libadios2-mpi-c++11-2.10:amd64 (2.10.1+dfsg1-12) ... Setting up libadios2-mpi-core-dev:amd64 (2.10.1+dfsg1-12) ... Setting up libgd3:amd64 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libadios2-mpi-c++11-dev:amd64 (2.10.1+dfsg1-12) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-myst-parser (4.0.0-1) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake --with python3,sphinxdoc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real dh_auto_clean --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex rm -rf python/build-real python/build-complex rm -rf debian/tmp-real debian/tmp-complex rm -rf python/fenics_dolfinx.egg-info rm -rf python/doc/build python/doc/source/generated rm -rf cpp/doc/latex cpp/doc/html cpp/doc/xml rm -rf /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake --with python3,sphinxdoc dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 cd obj-x86_64-linux-gnu-real && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.7") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Found PETSc version 3.21.6, prefix: /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.21.2, prefix: /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.5) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (26.4s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_configure --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex -D/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -- -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING="--oversubscribe" -D CMAKE_CXX_FLAGS:STRING="-fpermissive" -D DOLFINX_EXTRA_CXX_FLAGS:STRING="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 cd obj-x86_64-linux-gnu-complex && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -D CMAKE_BUILD_TYPE:STRING=RelWithDebInfo -D BUILD_SHARED_LIBS:BOOL=ON -D CMAKE_SKIP_RPATH:BOOL=ON -D CMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF -D DOLFINX_ENABLE_TRILINOS:BOOL=OFF -D DOLFINX_ENABLE_HDF5:BOOL=ON -D HDF5_C_COMPILER_EXECUTABLE:FILEPATH=/usr/bin/h5pcc -D DOLFINX_ENABLE_PARMETIS:BOOL=OFF -D DOLFINX_ENABLE_SCOTCH:BOOL=ON -D DOLFINX_ENABLE_DOCS:BOOL=OFF -D DOLFINX_ENABLE_MPI:BOOL=ON -D MPIEXEC_PARAMS:STRING=--oversubscribe -D CMAKE_CXX_FLAGS:STRING=-fpermissive -D "DOLFINX_EXTRA_CXX_FLAGS:STRING=-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" -D DEBIAN_VERSION_ID=debian_1:0.9.0-2 ../cpp -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found suitable version "3.1", minimum required is "3") -- Found MPI: TRUE (found suitable version "3.1", minimum required is "3") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found Python3: /usr/bin/python3 (found version "3.12.7") found components: Interpreter -- Asking Python module FFCx for location of ufcx.h... -- Found UFCx: /usr/lib/python3/dist-packages/ffcx/codegeneration (found suitable version "0.9.0", minimum required is "0.9") -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'OPTIONAL;PETSc>=3.15;petsc>=3.15' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Found PETSc version 3.21.6, prefix: /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex -- Checking for one of the modules 'slepc>=3.15' -- Found SLEPc version 3.21.2, prefix: /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex -- Could NOT find SCOTCH (missing: SCOTCH_DIR) -- Checking for package 'SCOTCH-PT' -- Found SCOTCH (version 7.0.5) -- Performing test SCOTCH_TEST_RUNS -- Performing test SCOTCH_TEST_RUNS - Success -- Found SCOTCH: /usr/lib/x86_64-linux-gnu/libptscotch.so;/usr/lib/x86_64-linux-gnu/libscotch.so;/usr/lib/x86_64-linux-gnu/libptscotcherr.so -- Checking for package 'KaHIP' -- KaHIP could not be found/configured. (missing: KAHIP_INCLUDE_DIRS KAHIP_LIBRARIES KAHIP_TEST_RUNS) -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFINx with shared libraries. * DOLFINX_BASIX_PYTHON, Ask Python basix module for hint where to find Basix C++ install using CONFIG mode. * DOLFINX_UFCX_PYTHON, Ask Python FFCx module where to find ufcx.h header using MODULE mode. Otherwise use CONFIG mode. -- The following OPTIONAL packages have been found: * ADIOS2 (required version >= 2.8.1), Adaptable Input/Output (I/O) System., IO, including in parallel -- The following RECOMMENDED packages have been found: * PETSc, Portable, Extensible Toolkit for Scientific Computation, Linear and nonlinear solvers * SLEPc, Scalable Library for Eigenvalue Problem Computations, Eigenvalue computation -- The following REQUIRED packages have been found: * MPI (required version >= 3) * Threads * spdlog * pugixml * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.70), Boost C++ libraries, * Basix (required version >= 0.8) * HDF5, Hierarchical Data Format 5 (HDF5), * Python3 * UFCx (required version >= 0.9), Interface for form-compilers (part of FFCx), * PkgConfig * SCOTCH, Programs and libraries for graph, mesh and hypergraph partitioning, Parallel graph partitioning -- The following features have been disabled: * INSTALL_RUNTIME_DEPENDENCIES, Include runtime dependencies in install (Windows-only) * DOLFINX_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * KaHIP, A family of graph partitioning programs, Parallel graph partitioning -- Configuring done (30.1s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY DOLFINX_ENABLE_DOCS DOLFINX_ENABLE_HDF5 DOLFINX_ENABLE_MPI DOLFINX_ENABLE_TRILINOS DOLFINX_EXTRA_CXX_FLAGS FETCHCONTENT_FULLY_DISCONNECTED MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real cd obj-x86_64-linux-gnu-real && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp [ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp [ 48%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partition.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partition.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp [ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp [ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp [ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED 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dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o -MF CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o.d -o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp [ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -MF CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o.d -o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp [ 65%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o -MF CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o.d -o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.cpp [ 67%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED 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dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o -MF CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o.d -o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.cpp [ 72%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp [ 83%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp [ 86%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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-isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp [ 90%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp [100%] Linking CXX shared library libdolfinx_real.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -fpermissive -O2 -g -DNDEBUG -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,-z,relro -shared -Wl,-soname,libdolfinx_real.so.0.9 -o libdolfinx_real.so.0.9.0 CMakeFiles/dolfinx.dir/common/defines.cpp.o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o CMakeFiles/dolfinx.dir/common/log.cpp.o CMakeFiles/dolfinx.dir/common/MPI.cpp.o CMakeFiles/dolfinx.dir/common/Table.cpp.o CMakeFiles/dolfinx.dir/common/Timer.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o CMakeFiles/dolfinx.dir/common/timing.cpp.o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o CMakeFiles/dolfinx.dir/fem/utils.cpp.o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o CMakeFiles/dolfinx.dir/graph/partition.cpp.o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o CMakeFiles/dolfinx.dir/io/cells.cpp.o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o CMakeFiles/dolfinx.dir/la/petsc.cpp.o CMakeFiles/dolfinx.dir/la/slepc.cpp.o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_symlink_library libdolfinx_real.so.0.9.0 libdolfinx_real.so.0.9 libdolfinx_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' [100%] Built target dolfinx make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex cd obj-x86_64-linux-gnu-complex && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx/CMakeFiles/dolfinx.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' [ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp [ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp [ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o [ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive 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/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp [ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o [ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp [ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp [ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o [ 20%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -MF CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o.d -o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp [ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o [ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -MF CMakeFiles/dolfinx.dir/common/timing.cpp.o.d -o 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/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -MF CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.cpp [ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o cd 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.cpp [ 37%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o -MF CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.cpp [ 39%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp [ 41%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/fem/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp [ 44%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o -MF CMakeFiles/dolfinx.dir/fem/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp [ 46%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp [ 48%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partition.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partition.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp [ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem 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-DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp [ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/la/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/la/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/la/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp [ 76%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/la/slepc.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/la/slepc.cpp.o -MF CMakeFiles/dolfinx.dir/la/slepc.cpp.o.d -o CMakeFiles/dolfinx.dir/la/slepc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp [ 79%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK 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dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp [ 90%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp [ 93%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp [ 95%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o cd 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dolfinx/CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp [ 97%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -MF CMakeFiles/dolfinx.dir/refinement/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp [100%] Linking CXX shared library libdolfinx_complex.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -fpermissive -O2 -g -DNDEBUG -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,-z,relro -shared -Wl,-soname,libdolfinx_complex.so.0.9 -o libdolfinx_complex.so.0.9.0 CMakeFiles/dolfinx.dir/common/defines.cpp.o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o CMakeFiles/dolfinx.dir/common/log.cpp.o CMakeFiles/dolfinx.dir/common/MPI.cpp.o CMakeFiles/dolfinx.dir/common/Table.cpp.o CMakeFiles/dolfinx.dir/common/Timer.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o CMakeFiles/dolfinx.dir/common/timing.cpp.o CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o CMakeFiles/dolfinx.dir/fem/utils.cpp.o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o CMakeFiles/dolfinx.dir/graph/partition.cpp.o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o CMakeFiles/dolfinx.dir/io/cells.cpp.o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o CMakeFiles/dolfinx.dir/io/xdmf_utils.cpp.o CMakeFiles/dolfinx.dir/la/SparsityPattern.cpp.o CMakeFiles/dolfinx.dir/la/petsc.cpp.o CMakeFiles/dolfinx.dir/la/slepc.cpp.o CMakeFiles/dolfinx.dir/mesh/Topology.cpp.o CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o CMakeFiles/dolfinx.dir/mesh/permutationcomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/topologycomputation.cpp.o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o CMakeFiles/dolfinx.dir/nls/NewtonSolver.cpp.o CMakeFiles/dolfinx.dir/refinement/plaza.cpp.o CMakeFiles/dolfinx.dir/refinement/utils.cpp.o /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so /usr/lib/x86_64-linux-gnu/libptscotch.so /usr/lib/x86_64-linux-gnu/libscotch.so /usr/lib/x86_64-linux-gnu/libptscotcherr.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E cmake_symlink_library libdolfinx_complex.so.0.9.0 libdolfinx_complex.so.0.9 libdolfinx_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' [100%] Built target dolfinx make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' echo "Tests must be run after installation" Tests must be run after installation make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --destdir=debian/tmp-real cd obj-x86_64-linux-gnu-real && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/defines.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/dolfinx_common.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/dolfinx_doc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/IndexMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/log.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/sort.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/math.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/MPI.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/Scatterer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/Table.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/Timer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/TimeLogger.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/TimeLogManager.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/timing.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Constant.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' cp COPYING.LESSER python for build in real; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ ADIOS2_ALWAYS_USE_MPI=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmp5k3kk8yb/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.7") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (14.3s) -- Generating done (0.1s) -- Build files have been written to: /tmp/tmp5k3kk8yb/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmp5k3kk8yb/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmp5k3kk8yb/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp5k3kk8yb/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmp5k3kk8yb/build/CMakeFiles /tmp/tmp5k3kk8yb/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmp5k3kk8yb/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmp5k3kk8yb/build' cd /tmp/tmp5k3kk8yb/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp5k3kk8yb/build /tmp/tmp5k3kk8yb/build /tmp/tmp5k3kk8yb/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" 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[ 36%] test/unit/fem/test_fem_pipeline.py ...........s.................s....... [ 37%] ..........s.s.......s.............................s..................... [ 40%] .s.............................. [ 41%] test/unit/fem/test_forms.py .. [ 41%] test/unit/fem/test_function.py ............ [ 41%] test/unit/fem/test_function_space.py ............. [ 42%] test/unit/fem/test_ghost_mesh_assembly.py ..X..X [ 42%] test/unit/fem/test_interpolation.py .................................... [ 44%] ........................................................................ [ 46%] ........................................................................ [ 49%] ...s............................ [ 50%] test/unit/fem/test_mixed_element.py ...................... [ 51%] test/unit/fem/test_mixed_mesh_dofmap.py .. [ 51%] test/unit/fem/test_petsc_discrete_operators.py ......................... [ 52%] ........................................................................ [ 55%] ................ [ 55%] test/unit/fem/test_petsc_nonlinear_assembler.py ...... [ 56%] test/unit/fem/test_petsc_solver_wrappers.py .. [ 56%] test/unit/fem/test_quadrature_elements.py .............................. [ 57%] ...... [ 57%] test/unit/fem/test_special_functions.py ... [ 57%] test/unit/fem/test_symmetric_tensor.py ........ [ 57%] test/unit/fem/test_symmetry.py ......................................... [ 59%] ....................................................... [ 61%] test/unit/fem/test_vector_assemble.py .. [ 61%] test/unit/fem/test_vector_function.py .......... [ 62%] test/unit/geometry/test_bounding_box_tree.py ........................... [ 63%] ................................. [ 64%] test/unit/geometry/test_gjk.py ......................................... [ 65%] ...................... [ 66%] test/unit/graph/test_adjacencylist.py .. [ 66%] test/unit/io/test_adios2.py ............................................ [ 68%] .....ssssssss [ 68%] test/unit/io/test_vtk.py ....................... [ 69%] test/unit/io/test_xdmf_function.py ..................................... [ 71%] ...........................................s [ 72%] test/unit/io/test_xdmf_mesh.py ..........ss............................. [ 74%] ................................... [ 75%] test/unit/io/test_xdmf_meshdata.py .. [ 75%] test/unit/io/test_xdmf_meshtags.py .... [ 75%] test/unit/la/test_matrix_csr.py ............................ [ 77%] test/unit/la/test_matrix_vector.py ............xxx....xxx....xxxxxxxxxx [ 78%] test/unit/la/test_nullspace.py ................................ [ 79%] test/unit/la/test_sparsity_pattern.py . [ 79%] test/unit/la/test_vector_scatter.py ........... [ 80%] test/unit/mesh/test_cell.py ... [ 80%] test/unit/mesh/test_create_mixed_mesh.py . [ 80%] test/unit/mesh/test_dual_graph.py . [ 80%] test/unit/mesh/test_face.py s. [ 80%] test/unit/mesh/test_ghost_mesh.py X..X...X [ 80%] test/unit/mesh/test_higher_order_mesh.py ............................... [ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-real/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 76.39s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 35.72s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 34.77s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 34.37s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] 33.54s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-NCE] 32.10s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 29.98s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAF] 29.39s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 27.98s call test/unit/fem/test_element_integrals.py::test_facet_integral[complex64-CellType.hexahedron] 27.51s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 27.21s call test/unit/fem/test_assemble_domains.py::test_assembly_dx_domains[meshtags-GhostMode.none] 26.53s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] 26.19s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 26.02s call test/unit/fem/test_dof_permuting.py::test_integral[3-tetrahedron-N2curl] 25.09s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-1-4] 24.79s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] 24.23s call test/unit/fem/test_element_integrals.py::test_facet_integral[float32-CellType.hexahedron] 23.26s call test/unit/fem/test_element_integrals.py::test_facet_integral[float64-CellType.hexahedron] 22.73s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 22.03s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Discontinuous Lagrange-3-4] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 6499.44s (1:48:19) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' cp COPYING.LESSER python dh_numpy3 -a for build in complex; do \ PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/bin:$PATH \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} \ CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/include" \ VERBOSE=1 \ PUSIMP_EXPECT_DOLFINX_IN_CWD=1 \ pybuild --dir=/build/reproducible-path/fenics-dolfinx-0.9.0/python --dest-dir=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build} --system=pyproject --name=dolfinx-${build} --test-pytest; \ done I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... loading initial cache file /tmp/tmprwg0zyqw/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/x86_64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/x86_64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Python: /usr/bin/python3.12 (found version "3.12.7") found components: Interpreter Development Development.Module Development.Embed -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3.12 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include -- Configuring done (21.3s) -- Generating done (0.1s) -- Build files have been written to: /tmp/tmprwg0zyqw/build *** Building project with Unix Makefiles... Change Dir: '/tmp/tmprwg0zyqw/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile gmake[2]: Entering directory '/tmp/tmprwg0zyqw/build' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmprwg0zyqw/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /tmp/tmprwg0zyqw/build/CMakeFiles /tmp/tmprwg0zyqw/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[3]: Entering directory '/tmp/tmprwg0zyqw/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' cd /tmp/tmprwg0zyqw/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o -c /usr/share/nanobind/src/nb_func.cpp [ 12%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o -c /usr/share/nanobind/src/nb_type.cpp [ 16%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o -c /usr/share/nanobind/src/nb_enum.cpp [ 20%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o -c /usr/share/nanobind/src/nb_ndarray.cpp [ 25%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o -c /usr/share/nanobind/src/nb_static_property.cpp [ 29%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o -c /usr/share/nanobind/src/common.cpp [ 33%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o -c /usr/share/nanobind/src/error.cpp [ 37%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o -c /usr/share/nanobind/src/trampoline.cpp [ 41%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o -c /usr/share/nanobind/src/implicit.cpp [ 45%] Linking CXX static library libnanobind-static.a /usr/bin/cmake -P CMakeFiles/nanobind-static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' [ 45%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' cd /tmp/tmprwg0zyqw/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include 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CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/refinement.cpp [100%] Linking CXX shared module cpp.cpython-312-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,-z,relro -shared -o cpp.cpython-312-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' [100%] Built target cpp gmake[3]: Leaving directory '/tmp/tmprwg0zyqw/build' /usr/bin/cmake -E cmake_progress_start /tmp/tmprwg0zyqw/build/CMakeFiles 0 gmake[2]: Leaving directory '/tmp/tmprwg0zyqw/build' *** Installing project into wheel... -- Install configuration: "Release" -- Installing: /tmp/tmprwg0zyqw/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so -- Set non-toolchain portion of runtime path of "/tmp/tmprwg0zyqw/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild base:311: cd /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build; python3.12 -m pytest --durations=20 -k "" ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 2643 items / 2 skipped test/debian-only/test_pusimp.py .sss.. [ 0%] test/unit/common/test_index_map.py ....s [ 0%] test/unit/common/test_mpi.py .. [ 0%] test/unit/common/test_public_api.py s [ 0%] test/unit/common/test_timer.py .. [ 0%] test/unit/common/test_version.py . [ 0%] test/unit/fem/test_assemble_domains.py ........... [ 1%] test/unit/fem/test_assemble_mesh_independent_form.py ........ [ 1%] test/unit/fem/test_assemble_submesh.py ................................. [ 2%] .............................................x.. [ 4%] test/unit/fem/test_assembler.py ........................................ [ 5%] .................... [ 6%] test/unit/fem/test_bcs.py .................... [ 7%] test/unit/fem/test_complex_assembler.py .... [ 7%] test/unit/fem/test_constant.py ....... [ 7%] test/unit/fem/test_custom_basix_element.py ............................. [ 8%] .............................xx..xx.. [ 10%] test/unit/fem/test_discrete_operators.py ............................... [ 11%] ........................................................................ [ 14%] ............................................. [ 15%] test/unit/fem/test_dof_coordinates.py ................ [ 16%] test/unit/fem/test_dof_permuting.py .................................... [ 17%] ........................................................................ [ 20%] ..................................ssssss [ 22%] test/unit/fem/test_dofmap.py ss.ss.ssss......... [ 22%] test/unit/fem/test_element_integrals.py ................................ [ 24%] ........................................................................ [ 26%] ........................................................................ [ 29%] ........................................................................ [ 32%] ................................ssssssssssssssss........................ [ 34%] [ 34%] test/unit/fem/test_expression.py ............................. [ 36%] test/unit/fem/test_fem_pipeline.py ...........s.................s....... [ 37%] ..........s.s.......s.............................s..................... [ 40%] .s.............................. [ 41%] test/unit/fem/test_forms.py .. [ 41%] test/unit/fem/test_function.py ............ [ 41%] test/unit/fem/test_function_space.py ............. [ 42%] test/unit/fem/test_ghost_mesh_assembly.py ..X..X [ 42%] test/unit/fem/test_interpolation.py .................................... [ 44%] ........................................................................ [ 46%] ........................................................................ [ 49%] ...s............................ [ 50%] test/unit/fem/test_mixed_element.py ...................... [ 51%] test/unit/fem/test_mixed_mesh_dofmap.py .. [ 51%] test/unit/fem/test_petsc_discrete_operators.py ......................... [ 52%] ........................................................................ [ 55%] ................ [ 55%] test/unit/fem/test_petsc_nonlinear_assembler.py ...... [ 56%] test/unit/fem/test_petsc_solver_wrappers.py .. [ 56%] test/unit/fem/test_quadrature_elements.py .............................. [ 57%] ...... [ 57%] test/unit/fem/test_special_functions.py ... [ 57%] test/unit/fem/test_symmetric_tensor.py ........ [ 57%] test/unit/fem/test_symmetry.py ......................................... [ 59%] ....................................................... [ 61%] test/unit/fem/test_vector_assemble.py .. [ 61%] test/unit/fem/test_vector_function.py .......... [ 62%] test/unit/geometry/test_bounding_box_tree.py ........................... [ 63%] ................................. [ 64%] test/unit/geometry/test_gjk.py ......................................... [ 65%] ...................... [ 66%] test/unit/graph/test_adjacencylist.py .. [ 66%] test/unit/io/test_adios2.py ............................................ [ 68%] .....ssssssss [ 68%] test/unit/io/test_vtk.py ....................... [ 69%] test/unit/io/test_xdmf_function.py ..................................... [ 71%] ...........................................s [ 72%] test/unit/io/test_xdmf_mesh.py ..........ss............................. [ 74%] ................................... [ 75%] test/unit/io/test_xdmf_meshdata.py .. [ 75%] test/unit/io/test_xdmf_meshtags.py .... [ 75%] test/unit/la/test_matrix_csr.py ............................ [ 77%] test/unit/la/test_matrix_vector.py ............xxx....xxx....xxxxxxxxxx [ 78%] test/unit/la/test_nullspace.py ................................ [ 79%] test/unit/la/test_sparsity_pattern.py . [ 79%] test/unit/la/test_vector_scatter.py ........... [ 80%] test/unit/mesh/test_cell.py ... [ 80%] test/unit/mesh/test_create_mixed_mesh.py . [ 80%] test/unit/mesh/test_dual_graph.py . [ 80%] test/unit/mesh/test_face.py s. [ 80%] test/unit/mesh/test_ghost_mesh.py X..X...X [ 80%] test/unit/mesh/test_higher_order_mesh.py ............................... [ 81%] ....................x...x..........xx..xx.......ssssssssssssssssssssssss [ 84%] .................. [ 85%] test/unit/mesh/test_manifold_point_search.py . [ 85%] test/unit/mesh/test_mesh.py ....................ss....s................. [ 86%] ........................................................................ [ 89%] ........................................................................ [ 92%] ...................................................................... [ 95%] test/unit/mesh/test_mesh_partitioners.py ..ss..ss..ss..ss..ss..ss....... [ 96%] . [ 96%] test/unit/mesh/test_meshtags.py .... [ 96%] test/unit/mesh/test_mixed_topology.py .... [ 96%] test/unit/nls/test_newton.py ... [ 96%] test/unit/refinement/test_interval.py .................................. [ 97%] ...................................... [ 99%] test/unit/refinement/test_refinement.py ................. [100%] =============================== warnings summary =============================== test/unit/fem/test_discrete_operators.py: 72 warnings /build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/test/unit/fem/test_discrete_operators.py:253: ComplexWarning: Casting complex values to real discards the imaginary part ux[: len(u.x.array)] = u.x.array[:] test/unit/fem/test_expression.py::test_facet_expression[complex64] test/unit/fem/test_expression.py::test_facet_expression[complex128] /usr/lib/python3/dist-packages/ffcx/element_interface.py:47: ComplexWarning: Casting complex values to real discards the imaginary part return np.asarray( test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/../README.md' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] test/unit/fem/test_function.py::test_cffi_expression[float64-double] /usr/lib/python3/dist-packages/setuptools/config/expand.py:126: SetuptoolsWarning: File '/build/reproducible-path/fenics-dolfinx-0.9.0/.pybuild/cpython3_3.12_dolfinx-complex/build/COPYING.LESSER' cannot be found for path in _filter_existing_files(_filepaths) test/unit/fem/test_function.py::test_cffi_expression[float32-float] /usr/lib/python3/dist-packages/setuptools/command/easy_install.py:41: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= 65.11s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] 29.87s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] 29.19s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] 28.76s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] 26.59s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] 22.22s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] 22.07s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] 21.43s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] 20.83s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] 20.49s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] 19.49s call test/unit/fem/test_fem_pipeline.py::test_vector_P_tp[3-Q-CellType.hexahedron] 19.05s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] 17.76s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] 17.63s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float64] 16.67s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] 16.58s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] 16.26s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] 15.04s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float32] 14.37s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-BDM-CellType.tetrahedron] 14.02s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-N2curl-CellType.tetrahedron] = 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 4307.90s (1:11:47) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc if [ "x" != "xno" ]; then \ case " mips64el hurd-i386 m68k sh4 " in \ *\ amd64\ *) echo "ALL tests have been disabled on amd64";; \ *) set -e; \ export CTEST_OUTPUT_ON_FAILURE=1; \ for build in real complex; do \ echo "== testing $build number build =="; \ builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-${build}; \ for mytest in test demo; do \ echo "running tests from $mytest for $build build"; \ testdir=${builddir}/run_${mytest}; \ mkdir -p $testdir; \ cd $testdir; \ if [ "x" != "x" ]; then echo "set(CTEST_CUSTOM_TESTS_IGNORE )" >> CTestCustom.cmake; fi; \ PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-${build} SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-${build} cmake -DCMAKE_MODULE_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DDOLFINX_DIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-${build}/usr/lib/x86_64-linux-gnu/cmake/dolfinx \ -DMPIEXEC_PARAMS:STRING="--oversubscribe" \ /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/${mytest}; \ make all VERBOSE=1; \ OMPI_ALLOW_RUN_AS_ROOT=1 OMPI_ALLOW_RUN_AS_ROOT_CONFIRM=1 make test VERBOSE=1; \ done; \ cd /build/reproducible-path/fenics-dolfinx-0.9.0; \ done; \ esac; \ fi == testing real number build == running tests from test for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (4.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/main.cpp.o -MF CMakeFiles/unittests.dir/main.cpp.o.d -o CMakeFiles/unittests.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/main.cpp [ 17%] Building CXX object CMakeFiles/unittests.dir/vector.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/vector.cpp.o -MF CMakeFiles/unittests.dir/vector.cpp.o.d -o CMakeFiles/unittests.dir/vector.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/vector.cpp [ 23%] Building CXX object CMakeFiles/unittests.dir/matrix.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/matrix.cpp.o -MF CMakeFiles/unittests.dir/matrix.cpp.o.d -o CMakeFiles/unittests.dir/matrix.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/matrix.cpp [ 29%] Building CXX object CMakeFiles/unittests.dir/io.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/io.cpp.o -MF CMakeFiles/unittests.dir/io.cpp.o.d -o CMakeFiles/unittests.dir/io.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/io.cpp [ 35%] Building CXX object CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o -MF CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o.d -o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sub_systems_manager.cpp [ 41%] Building CXX object CMakeFiles/unittests.dir/common/index_map.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/index_map.cpp.o -MF CMakeFiles/unittests.dir/common/index_map.cpp.o.d -o CMakeFiles/unittests.dir/common/index_map.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/index_map.cpp [ 47%] Building CXX object CMakeFiles/unittests.dir/common/sort.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/sort.cpp.o -MF CMakeFiles/unittests.dir/common/sort.cpp.o.d -o CMakeFiles/unittests.dir/common/sort.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/sort.cpp [ 52%] Building CXX object CMakeFiles/unittests.dir/fem/functionspace.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/fem/functionspace.cpp.o -MF CMakeFiles/unittests.dir/fem/functionspace.cpp.o.d -o CMakeFiles/unittests.dir/fem/functionspace.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/fem/functionspace.cpp [ 58%] Building CXX object CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o -MF CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o.d -o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/distributed_mesh.cpp [ 64%] Building CXX object CMakeFiles/unittests.dir/mesh/generation.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/generation.cpp.o -MF CMakeFiles/unittests.dir/mesh/generation.cpp.o.d -o CMakeFiles/unittests.dir/mesh/generation.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/generation.cpp [ 70%] Building CXX object CMakeFiles/unittests.dir/common/CIFailure.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/common/CIFailure.cpp.o -MF CMakeFiles/unittests.dir/common/CIFailure.cpp.o.d -o CMakeFiles/unittests.dir/common/CIFailure.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/common/CIFailure.cpp [ 76%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/interval.cpp [ 82%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/option.cpp [ 88%] Building CXX object CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test -isystem 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-Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 1.01 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 1.02 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done (4.5s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start 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-pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 11%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic/biharmonic.c [ 15%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 15%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 19%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 23%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem 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-DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly/mixed_codim0.c [ 30%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 30%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 34%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 38%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 38%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 42%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 46%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 50%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson/poisson.c [ 53%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 53%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 57%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 61%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 65%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free/poisson.c [ 69%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 69%] Built target demo_poisson_matrix_free make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 73%] Compile hyperelasticity.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py --scalar_type=float64 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build.make hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 76%] Building CXX object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -MF CMakeFiles/demo_hyperelasticity.dir/main.cpp.o.d -o CMakeFiles/demo_hyperelasticity.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp [ 80%] Building C object hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT hyperelasticity/CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -MF CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o.d -o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity/hyperelasticity.c [ 84%] Linking CXX executable demo_hyperelasticity cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/hyperelasticity && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_hyperelasticity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_hyperelasticity.dir/main.cpp.o CMakeFiles/demo_hyperelasticity.dir/hyperelasticity.c.o -o demo_hyperelasticity -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 84%] Built target demo_hyperelasticity make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 88%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 92%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 92%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [ 96%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 1.01 sec Start 2: demo_biharmonic_mpi_3 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 2.67 sec Start 3: demo_biharmonic_serial 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.86 sec Start 4: demo_codim_0_assembly_mpi_2 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.59 sec Start 5: demo_codim_0_assembly_mpi_3 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.55 sec Start 6: demo_codim_0_assembly_serial 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.39 sec Start 7: demo_custom_kernel_mpi_2 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 2.23 sec Start 8: demo_custom_kernel_mpi_3 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 1.37 sec Start 9: demo_custom_kernel_serial 9/24 Test #9: demo_custom_kernel_serial .................... Passed 1.45 sec Start 10: demo_poisson_mpi_2 10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 1.52 sec Start 11: demo_poisson_mpi_3 11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 1.81 sec Start 12: demo_poisson_serial 12/24 Test #12: demo_poisson_serial .......................... Passed 0.65 sec Start 13: demo_poisson_matrix_free_mpi_2 13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 1.92 sec Start 14: demo_poisson_matrix_free_mpi_3 14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 2.67 sec Start 15: demo_poisson_matrix_free_serial 15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.77 sec Start 16: demo_hyperelasticity_mpi_2 16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 11.90 sec Start 17: demo_hyperelasticity_mpi_3 17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 16.89 sec Start 18: demo_hyperelasticity_serial 18/24 Test #18: demo_hyperelasticity_serial .................. Passed 5.56 sec Start 19: demo_interpolation-io_mpi_2 19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 3.95 sec Start 20: demo_interpolation-io_mpi_3 20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 4.08 sec Start 21: demo_interpolation-io_serial 21/24 Test #21: demo_interpolation-io_serial ................. Passed 1.49 sec Start 22: demo_interpolation_different_meshes_mpi_2 22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 15.85 sec Start 23: demo_interpolation_different_meshes_mpi_3 23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 20.61 sec Start 24: demo_interpolation_different_meshes_serial 24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 3.37 sec 100% tests passed, 0 tests failed out of 24 Total Test time (real) = 104.21 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Configuring done (17.9s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: MPIEXEC_PARAMS -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 5%] Compile poisson.py using FFCx ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/poisson.py cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles/unittests.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make -f CMakeFiles/unittests.dir/build.make CMakeFiles/unittests.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [ 11%] Building CXX object CMakeFiles/unittests.dir/main.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/main.cpp.o -MF CMakeFiles/unittests.dir/main.cpp.o.d -o CMakeFiles/unittests.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/main.cpp [ 17%] Building CXX object CMakeFiles/unittests.dir/vector.cpp.o /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK 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-fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -MF CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o.d -o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/test/mesh/refinement/rectangle.cpp [ 94%] Building C object CMakeFiles/unittests.dir/poisson.c.o /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=gnu17 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/unittests.dir/poisson.c.o -MF CMakeFiles/unittests.dir/poisson.c.o.d -o CMakeFiles/unittests.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/poisson.c [100%] Linking CXX executable unittests /usr/bin/cmake -E cmake_link_script CMakeFiles/unittests.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/unittests.dir/main.cpp.o CMakeFiles/unittests.dir/vector.cpp.o CMakeFiles/unittests.dir/matrix.cpp.o CMakeFiles/unittests.dir/io.cpp.o CMakeFiles/unittests.dir/common/sub_systems_manager.cpp.o CMakeFiles/unittests.dir/common/index_map.cpp.o CMakeFiles/unittests.dir/common/sort.cpp.o CMakeFiles/unittests.dir/fem/functionspace.cpp.o CMakeFiles/unittests.dir/mesh/distributed_mesh.cpp.o CMakeFiles/unittests.dir/mesh/generation.cpp.o CMakeFiles/unittests.dir/common/CIFailure.cpp.o CMakeFiles/unittests.dir/mesh/refinement/interval.cpp.o CMakeFiles/unittests.dir/mesh/refinement/option.cpp.o CMakeFiles/unittests.dir/mesh/refinement/rectangle.cpp.o CMakeFiles/unittests.dir/poisson.c.o -o unittests -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /usr/lib/libCatch2Main.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/libCatch2.a /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' [100%] Built target unittests make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests 1/1 Test #1: unittests ........................ Passed 3.00 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 3.01 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/x86_64-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - found -- Checking for one of the modules 'SLEPc;slepc' -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Looking for PETSC_USE_REAL_DOUBLE -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode -- Configuring done (15.1s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 4%] Compile biharmonic.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/CMakeFiles/demo_biharmonic.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f biharmonic/CMakeFiles/demo_biharmonic.dir/build.make biharmonic/CMakeFiles/demo_biharmonic.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 9%] Building CXX object biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/main.cpp.o -MF CMakeFiles/demo_biharmonic.dir/main.cpp.o.d -o CMakeFiles/demo_biharmonic.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp [ 13%] Building C object biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT biharmonic/CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -MF CMakeFiles/demo_biharmonic.dir/biharmonic.c.o.d -o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic/biharmonic.c [ 18%] Linking CXX executable demo_biharmonic cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/biharmonic && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_biharmonic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_biharmonic.dir/main.cpp.o CMakeFiles/demo_biharmonic.dir/biharmonic.c.o -o demo_biharmonic -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 18%] Built target demo_biharmonic make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 22%] Compile mixed_codim0.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build.make codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 27%] Building CXX object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -MF CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o.d -o CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp [ 31%] Building C object codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT codim_0_assembly/CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -MF CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o.d -o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly/mixed_codim0.c [ 36%] Linking CXX executable demo_codim_0_assembly cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/codim_0_assembly && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_codim_0_assembly.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_codim_0_assembly.dir/main.cpp.o CMakeFiles/demo_codim_0_assembly.dir/mixed_codim0.c.o -o demo_codim_0_assembly -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 36%] Built target demo_codim_0_assembly make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel/CMakeFiles/demo_custom_kernel.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f custom_kernel/CMakeFiles/demo_custom_kernel.dir/build.make custom_kernel/CMakeFiles/demo_custom_kernel.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 40%] Building CXX object custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT custom_kernel/CMakeFiles/demo_custom_kernel.dir/main.cpp.o -MF CMakeFiles/demo_custom_kernel.dir/main.cpp.o.d -o CMakeFiles/demo_custom_kernel.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp [ 45%] Linking CXX executable demo_custom_kernel cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/custom_kernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_custom_kernel.dir/main.cpp.o -o demo_custom_kernel -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 45%] Built target demo_custom_kernel make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 50%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/CMakeFiles/demo_poisson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson/CMakeFiles/demo_poisson.dir/build.make poisson/CMakeFiles/demo_poisson.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 54%] Building CXX object poisson/CMakeFiles/demo_poisson.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson/CMakeFiles/demo_poisson.dir/main.cpp.o -MF CMakeFiles/demo_poisson.dir/main.cpp.o.d -o CMakeFiles/demo_poisson.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp [ 59%] Building C object poisson/CMakeFiles/demo_poisson.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson/CMakeFiles/demo_poisson.dir/poisson.c.o -MF CMakeFiles/demo_poisson.dir/poisson.c.o.d -o CMakeFiles/demo_poisson.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson/poisson.c [ 63%] Linking CXX executable demo_poisson cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson.dir/main.cpp.o CMakeFiles/demo_poisson.dir/poisson.c.o -o demo_poisson -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 63%] Built target demo_poisson make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 68%] Compile poisson.py using FFCx cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && ffcx /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py --scalar_type=complex128 cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build.make poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 72%] Building CXX object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -MF CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp [ 77%] Building C object poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cc -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT poisson_matrix_free/CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -MF CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o.d -o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free/poisson.c [ 81%] Linking CXX executable demo_poisson_matrix_free cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/poisson_matrix_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_poisson_matrix_free.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_poisson_matrix_free.dir/main.cpp.o CMakeFiles/demo_poisson_matrix_free.dir/poisson.c.o -o demo_poisson_matrix_free -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 81%] Built target demo_poisson_matrix_free make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io/CMakeFiles/demo_interpolation-io.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation-io/CMakeFiles/demo_interpolation-io.dir/build.make interpolation-io/CMakeFiles/demo_interpolation-io.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 86%] Building CXX object interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation-io/CMakeFiles/demo_interpolation-io.dir/main.cpp.o -MF CMakeFiles/demo_interpolation-io.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation-io.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp [ 90%] Linking CXX executable demo_interpolation-io cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation-io.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib "CMakeFiles/demo_interpolation-io.dir/main.cpp.o" -o demo_interpolation-io -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 90%] Built target demo_interpolation-io make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/depend make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make -f interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build.make interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [ 95%] Building CXX object interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-comment -Wall -Wextra -pedantic -MD -MT interpolation_different_meshes/CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -MF CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o.d -o CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp [100%] Linking CXX executable demo_interpolation_different_meshes cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/interpolation_different_meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_interpolation_different_meshes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib CMakeFiles/demo_interpolation_different_meshes.dir/main.cpp.o -o demo_interpolation_different_meshes -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' [100%] Built target demo_interpolation_different_meshes make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' Running tests... /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 3.48 sec Start 2: demo_biharmonic_mpi_3 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 3.73 sec Start 3: demo_biharmonic_serial 3/21 Test #3: demo_biharmonic_serial ....................... Passed 3.02 sec Start 4: demo_codim_0_assembly_mpi_2 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 4.08 sec Start 5: demo_codim_0_assembly_mpi_3 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 2.46 sec Start 6: demo_codim_0_assembly_serial 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.99 sec Start 7: demo_custom_kernel_mpi_2 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 10.14 sec Start 8: demo_custom_kernel_mpi_3 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 12.51 sec Start 9: demo_custom_kernel_serial 9/21 Test #9: demo_custom_kernel_serial .................... Passed 7.58 sec Start 10: demo_poisson_mpi_2 10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 4.54 sec Start 11: demo_poisson_mpi_3 11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 3.32 sec Start 12: demo_poisson_serial 12/21 Test #12: demo_poisson_serial .......................... Passed 1.01 sec Start 13: demo_poisson_matrix_free_mpi_2 13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 2.25 sec Start 14: demo_poisson_matrix_free_mpi_3 14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 2.85 sec Start 15: demo_poisson_matrix_free_serial 15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.95 sec Start 16: demo_interpolation-io_mpi_2 16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 4.77 sec Start 17: demo_interpolation-io_mpi_3 17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 3.95 sec Start 18: demo_interpolation-io_serial 18/21 Test #18: demo_interpolation-io_serial ................. Passed 1.14 sec Start 19: demo_interpolation_different_meshes_mpi_2 19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 13.91 sec Start 20: demo_interpolation_different_meshes_mpi_3 20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 21.27 sec Start 21: demo_interpolation_different_meshes_serial 21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 5.42 sec 100% tests passed, 0 tests failed out of 21 Total Test time (real) = 113.43 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex cd obj-x86_64-linux-gnu-complex && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9 -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/defines.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_common.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/dolfinx_doc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/IndexMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/log.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/sort.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/math.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/MPI.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Scatterer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Table.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/Timer.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogger.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/TimeLogManager.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/timing.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Constant.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/CoordinateElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DirichletBC.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/DofMap.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/ElementDofLayout.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Expression.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FiniteElement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Form.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/Function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/FunctionSpace.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assembler.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_matrix_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_scalar_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/assemble_vector_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/discreteoperators.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dofmapbuilder.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/dolfinx_fem.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/interpolate.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/sparsitybuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/traits.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/fem/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/BoundingBoxTree.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/gjk.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/dolfinx_geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/geometry/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/AdjacencyList.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/dolfinx_graph.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/ordering.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partitioners.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/graph/partition.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/dolfinx_io.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/ADIOS2Writers.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/cells.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/HDF5Interface.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/vtk_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/VTKFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/XDMFFile.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_function.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/io/xdmf_utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/dolfinx_la.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/MatrixCSR.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/matrix_csr_impl.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/SparsityPattern.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/Vector.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/petsc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/la/slepc.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/dolfinx_mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Mesh.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Geometry.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/Topology.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/MeshTags.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/cell_types.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/generation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/graphbuild.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/permutationcomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/topologycomputation.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/mesh/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/dolfinx_nls.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/nls/NewtonSolver.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/dolfinx_refinement.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/interval.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/plaza.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/refine.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/utils.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/refinement/option.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include/dolfinx/common/version.h -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXConfigVersion.cmake -- Installing: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_complex.pc -- Up-to-date: /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- DOLFINx has now been installed in /usr and demo programs have been installed in /usr/share/dolfinx/demo Don't forget to update your environment variables. This can be done easily using the helper file 'dolfinx.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/lib/x86_64-linux-gnu/dolfinx/dolfinx.conf ---------------------------------------------------------------------------- make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' (cd cpp/doc; doxygen) warning: Tag 'HTML_TIMESTAMP' at line 1387 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 2055 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Reading and parsing tag files Parsing files Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... 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Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp... 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Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/biharmonic.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/mixed_codim0.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/hyperelasticity.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/main.cpp... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Parsing file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/poisson.py... Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/README.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_common.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/dolfinx_doc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/math.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Scatterer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/sort.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogger.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/TimeLogManager.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/timing.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/dolfinx.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_matrix_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_scalar_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assemble_vector_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/assembler.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Constant.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/CoordinateElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DirichletBC.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/discreteoperators.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dofmapbuilder.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/dolfinx_fem.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ElementDofLayout.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Expression.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FiniteElement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Form.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/dolfinx_io.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/xdmf_utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/cell_types.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/dolfinx_mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/generation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Mesh.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/MeshTags.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/permutationcomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/Topology.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/topologycomputation.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/dolfinx_nls.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/NewtonSolver.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/dolfinx_refinement.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/interval.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... Generating file documentation... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... Generating group documentation... Generating class documentation... Generating docs for compound HyperElasticProblem... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound basix::FiniteElement... Generating docs for namespace dolfinx Generating docs for compound dolfinx::Table... Generating docs for concept dolfinx::scalar... Generating docs for namespace dolfinx::common Generating docs for compound dolfinx::common::IndexMap... Generating docs for compound dolfinx::common::Scatterer... Generating docs for compound dolfinx::common::TimeLogger... Generating docs for compound dolfinx::common::TimeLogManager... Generating docs for compound dolfinx::common::Timer... Generating docs for namespace dolfinx::fem Generating docs for compound dolfinx::fem::Constant... Generating docs for compound dolfinx::fem::CoordinateElement... Generating docs for compound dolfinx::fem::DirichletBC... Generating docs for compound dolfinx::fem::DofMap... Generating docs for compound dolfinx::fem::ElementDofLayout... Generating docs for compound dolfinx::fem::Expression... Generating docs for compound dolfinx::fem::FiniteElement... Generating docs for compound dolfinx::fem::Form... Generating docs for compound dolfinx::fem::Function... Generating docs for compound dolfinx::fem::FunctionSpace... Generating docs for compound dolfinx::fem::integral_data... Generating docs for concept dolfinx::fem::MDSpan... Generating docs for concept dolfinx::fem::DofTransformKernel... Generating docs for concept dolfinx::fem::FEkernel... Generating docs for concept dolfinx::fem::impl::FetchCells... Generating docs for namespace dolfinx::fem::petsc Generating docs for namespace dolfinx::fem::sparsitybuild Generating docs for namespace dolfinx::geometry Generating docs for compound dolfinx::geometry::BoundingBoxTree... Generating docs for compound dolfinx::geometry::PointOwnershipData... Generating docs for namespace dolfinx::graph Generating docs for compound dolfinx::graph::AdjacencyList... Generating docs for namespace dolfinx::graph::build Generating docs for namespace dolfinx::graph::kahip Generating docs for namespace dolfinx::io Generating docs for compound dolfinx::io::ADIOS2Writer... Generating docs for compound dolfinx::io::VTKFile... Generating docs for compound dolfinx::io::XDMFFile... Generating docs for namespace dolfinx::io::cells Generating docs for namespace dolfinx::io::xdmf_function Generating docs for namespace dolfinx::io::xdmf_mesh Generating docs for namespace dolfinx::la Generating docs for compound dolfinx::la::MatrixCSR... Generating docs for compound dolfinx::la::SLEPcEigenSolver... Generating docs for compound dolfinx::la::SparsityPattern... Generating docs for compound dolfinx::la::Vector... Generating docs for concept dolfinx::la::MatSet... Generating docs for namespace dolfinx::la::petsc Generating docs for compound dolfinx::la::petsc::KrylovSolver... Generating docs for compound dolfinx::la::petsc::Matrix... Generating docs for compound dolfinx::la::petsc::Operator... Generating docs for compound dolfinx::la::petsc::Vector... Generating docs for namespace dolfinx::la::petsc::options Generating docs for namespace dolfinx::mesh Generating docs for compound dolfinx::mesh::Geometry... Generating docs for compound dolfinx::mesh::Mesh... Generating docs for compound dolfinx::mesh::MeshTags... Generating docs for compound dolfinx::mesh::Topology... Generating docs for concept dolfinx::mesh::MarkerFn... Generating docs for namespace dolfinx::MPI Generating docs for compound dolfinx::MPI::Comm... Generating docs for compound dolfinx::MPI::dependent_false... Generating docs for namespace dolfinx::nls Generating docs for compound dolfinx::nls::petsc::NewtonSolver... Generating docs for namespace dolfinx::refinement Generating docs for namespace dolfinx::refinement::plaza Generating graph info page... Generating directory documentation... Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free Generating dependency graph for directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class dolfinx::io::ADIOS2Writer Generating XML output for class dolfinx::graph::AdjacencyList Generating XML output for class dolfinx::geometry::BoundingBoxTree Generating XML output for class dolfinx::MPI::Comm Generating XML output for class dolfinx::fem::Constant Generating XML output for class dolfinx::fem::CoordinateElement Generating XML output for class dolfinx::MPI::dependent_false Generating XML output for class dolfinx::fem::DirichletBC Generating XML output for class dolfinx::fem::DofMap Generating XML output for class dolfinx::fem::ElementDofLayout Generating XML output for class dolfinx::fem::Expression Generating XML output for class dolfinx::io::FidesWriter Generating XML output for class basix::FiniteElement Generating XML output for class dolfinx::fem::FiniteElement Generating XML output for class dolfinx::fem::Form Generating XML output for class dolfinx::fem::Function Generating XML output for class dolfinx::fem::FunctionSpace Generating XML output for class dolfinx::mesh::Geometry Generating XML output for class HyperElasticProblem Generating XML output for class dolfinx::common::IndexMap Generating XML output for class dolfinx::fem::integral_data Generating XML output for class dolfinx::la::petsc::KrylovSolver Generating XML output for class dolfinx::la::petsc::Matrix Generating XML output for class dolfinx::la::MatrixCSR Generating XML output for class dolfinx::mesh::Mesh Generating XML output for class dolfinx::mesh::MeshTags Generating XML output for class dolfinx::nls::petsc::NewtonSolver Generating XML output for class dolfinx::la::petsc::Operator Generating XML output for class dolfinx::geometry::PointOwnershipData Generating XML output for class dolfinx::scalar_value_type Generating XML output for class dolfinx::scalar_value_type< T, std::void_t< typename T::value_type > > Generating XML output for class dolfinx::common::Scatterer Generating XML output for class dolfinx::la::SLEPcEigenSolver Generating XML output for class dolfinx::la::SparsityPattern Generating XML output for class dolfinx::Table Generating XML output for class dolfinx::common::TimeLogger Generating XML output for class dolfinx::common::TimeLogManager Generating XML output for class dolfinx::common::Timer Generating XML output for class dolfinx::mesh::Topology Generating XML output for class dolfinx::la::petsc::Vector Generating XML output for class dolfinx::la::Vector Generating XML output for class dolfinx::io::VTKFile Generating XML output for class dolfinx::io::VTXWriter Generating XML output for class dolfinx::io::XDMFFile Generating XML output for concept dolfinx::fem::DofTransformKernel Generating XML output for concept dolfinx::fem::FEkernel Generating XML output for concept dolfinx::fem::impl::FetchCells Generating XML output for concept dolfinx::fem::MDSpan Generating XML output for concept dolfinx::la::MatSet Generating XML output for concept dolfinx::mesh::MarkerFn Generating XML output for concept dolfinx::scalar Generating XML output for namespace @104 Generating XML output for namespace @108 Generating XML output for namespace @110 Generating XML output for namespace @112 Generating XML output for namespace @117 Generating XML output for namespace @122 Generating XML output for namespace @13 Generating XML output for namespace @33 Generating XML output for namespace @36 Generating XML output for namespace @38 Generating XML output for namespace @4 Generating XML output for namespace @44 Generating XML output for namespace @63 Generating XML output for namespace @67 Generating XML output for namespace @69 Generating XML output for namespace @71 Generating XML output for namespace @74 Generating XML output for namespace @78 Generating XML output for namespace @80 Generating XML output for namespace @84 Generating XML output for namespace basix Generating XML output for namespace biharmonic Generating XML output for namespace dolfinx Generating XML output for namespace dolfinx::common Generating XML output for namespace dolfinx::fem Generating XML output for namespace dolfinx::fem::impl Generating XML output for namespace dolfinx::fem::petsc Generating XML output for namespace dolfinx::fem::sparsitybuild Generating XML output for namespace dolfinx::geometry Generating XML output for namespace dolfinx::geometry::impl Generating XML output for namespace dolfinx::geometry::impl_bb Generating XML output for namespace dolfinx::geometry::impl_gjk Generating XML output for namespace dolfinx::graph Generating XML output for namespace dolfinx::graph::build Generating XML output for namespace dolfinx::graph::kahip Generating XML output for namespace dolfinx::graph::parmetis Generating XML output for namespace dolfinx::graph::scotch Generating XML output for namespace dolfinx::io Generating XML output for namespace dolfinx::io::adios2_writer Generating XML output for namespace dolfinx::io::cells Generating XML output for namespace dolfinx::io::hdf5 Generating XML output for namespace dolfinx::io::impl Generating XML output for namespace dolfinx::io::impl_adios2 Generating XML output for namespace dolfinx::io::impl_fides Generating XML output for namespace dolfinx::io::impl_vtx Generating XML output for namespace dolfinx::io::xdmf_function Generating XML output for namespace dolfinx::io::xdmf_mesh Generating XML output for namespace dolfinx::io::xdmf_utils Generating XML output for namespace dolfinx::la Generating XML output for namespace dolfinx::la::impl Generating XML output for namespace dolfinx::la::petsc Generating XML output for namespace dolfinx::la::petsc::options Generating XML output for namespace dolfinx::math Generating XML output for namespace dolfinx::mesh Generating XML output for namespace dolfinx::mesh::impl Generating XML output for namespace dolfinx::MPI Generating XML output for namespace dolfinx::nls Generating XML output for namespace dolfinx::nls::petsc Generating XML output for namespace dolfinx::refinement Generating XML output for namespace dolfinx::refinement::impl Generating XML output for namespace dolfinx::refinement::interval Generating XML output for namespace dolfinx::refinement::plaza Generating XML output for namespace dolfinx::refinement::plaza::impl Generating XML output for namespace hyperelasticity Generating XML output for namespace linalg Generating XML output for namespace mixed_codim0 Generating XML output for namespace poisson Generating XML output for namespace pugi Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file hyperelasticity.py Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md Generating XML output for file defines.cpp Generating XML output for file defines.h Generating XML output for file dolfinx_common.h Generating XML output for file dolfinx_doc.h Generating XML output for file IndexMap.cpp Generating XML output for file IndexMap.h Generating XML output for file log.cpp Generating XML output for file log.h Generating XML output for file math.h Generating XML output for file MPI.cpp Generating XML output for file MPI.h Generating XML output for file Scatterer.h Generating XML output for file sort.h Generating XML output for file Table.cpp Generating XML output for file Table.h Generating XML output for file TimeLogger.cpp Generating XML output for file TimeLogger.h Generating XML output for file TimeLogManager.cpp Generating XML output for file TimeLogManager.h Generating XML output for file Timer.cpp Generating XML output for file Timer.h Generating XML output for file timing.cpp Generating XML output for file timing.h Generating XML output for file types.h Generating XML output for file dolfinx.h Generating XML output for file assemble_matrix_impl.h Generating XML output for file assemble_scalar_impl.h Generating XML output for file assemble_vector_impl.h Generating XML output for file assembler.h Generating XML output for file Constant.h Generating XML output for file CoordinateElement.cpp Generating XML output for file CoordinateElement.h Generating XML output for file DirichletBC.cpp Generating XML output for file DirichletBC.h Generating XML output for file discreteoperators.h Generating XML output for file DofMap.cpp Generating XML output for file DofMap.h Generating XML output for file dofmapbuilder.cpp Generating XML output for file dofmapbuilder.h Generating XML output for file dolfinx_fem.h Generating XML output for file ElementDofLayout.cpp Generating XML output for file ElementDofLayout.h Generating XML output for file Expression.h Generating XML output for file FiniteElement.cpp Generating XML output for file FiniteElement.h Generating XML output for file Form.h Generating XML output for file Function.h Generating XML output for file FunctionSpace.h Generating XML output for file interpolate.h Generating XML output for file sparsitybuild.cpp Generating XML output for file sparsitybuild.h Generating XML output for file traits.h Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file utils.h Generating XML output for file AdjacencyList.h Generating XML output for file dolfinx_graph.h Generating XML output for file ordering.cpp Generating XML output for file ordering.h Generating XML output for file partition.cpp Generating XML output for file partition.h Generating XML output for file partitioners.cpp Generating XML output for file partitioners.h Generating XML output for file ADIOS2Writers.cpp Generating XML output for file ADIOS2Writers.h Generating XML output for file cells.cpp Generating XML output for file cells.h Generating XML output for file dolfinx_io.h Generating XML output for file HDF5Interface.cpp Generating XML output for file HDF5Interface.h Generating XML output for file vtk_utils.cpp Generating XML output for file vtk_utils.h Generating XML output for file VTKFile.cpp Generating XML output for file VTKFile.h Generating XML output for file xdmf_function.cpp Generating XML output for file xdmf_function.h Generating XML output for file xdmf_mesh.cpp Generating XML output for file xdmf_mesh.h Generating XML output for file xdmf_utils.cpp Generating XML output for file xdmf_utils.h Generating XML output for file XDMFFile.cpp Generating XML output for file XDMFFile.h Generating XML output for file dolfinx_la.h Generating XML output for file matrix_csr_impl.h Generating XML output for file MatrixCSR.h Generating XML output for file petsc.cpp Generating XML output for file petsc.cpp Generating XML output for file petsc.h Generating XML output for file petsc.h Generating XML output for file slepc.cpp Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp Generating XML output for file SparsityPattern.h Generating XML output for file Vector.h Generating XML output for file cell_types.cpp Generating XML output for file cell_types.h Generating XML output for file dolfinx_mesh.h Generating XML output for file generation.h Generating XML output for file Geometry.h Generating XML output for file graphbuild.cpp Generating XML output for file graphbuild.h Generating XML output for file Mesh.h Generating XML output for file MeshTags.h Generating XML output for file permutationcomputation.cpp Generating XML output for file permutationcomputation.h Generating XML output for file Topology.cpp Generating XML output for file Topology.h Generating XML output for file topologycomputation.cpp Generating XML output for file topologycomputation.h Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file utils.cpp Generating XML output for file dolfinx_nls.h Generating XML output for file NewtonSolver.cpp Generating XML output for file NewtonSolver.h Generating XML output for file dolfinx_refinement.h Generating XML output for file interval.h Generating XML output for file option.h Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free/ Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/ Generating XML output for the main page Running plantuml with JAVA... Running dot... Generating dot graphs using 21 parallel threads... 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(cd python/doc; \ mkdir -p build/pkgconfig; \ cp /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx_real.pc build/pkgconfig; \ sed "s|prefix=/usr|prefix=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr|" -i build/pkgconfig/dolfinx_real.pc; \ PYTHONPATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/python3.12/dist-packages \ PKG_CONFIG_PATH=`pwd`/build/pkgconfig:${PKG_CONFIG_PATH} \ LD_LIBRARY_PATH=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/:${LD_LIBRARY_PATH} \ XDG_CACHE_HOME=`pwd`/build \ RDMAV_FORK_SAFE=1 \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v7.4.7 Matplotlib created a temporary cache directory at /tmp/matplotlib-2f2h5h_c because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. TNT degree 2 error: 0.0029421918345155706 TNT degree 2 error: 0.00017118942553986293 TNT degree 3 error: 8.3851068287429e-06 TNT degree 4 error: 3.3949902023163173e-07 TNT degree 5 error: 1.2528243219944414e-08 TNT degree 6 error: 4.2426963107010777e-10 TNT degree 7 error: 1.9821138957997492e-10 TNT degree 8 error: 2.9565584931541024e-10 Q degree 1 error: 0.04076382001057708 Q degree 2 error: 0.002918221339526905 Q degree 3 error: 0.00015944660110819847 Q degree 4 error: 7.93742144510796e-06 Q degree 5 error: 3.103466862446263e-07 Q degree 6 error: 1.1356498987237013e-08 Q degree 7 error: 3.4161428239866125e-10 Q degree 8 error: 6.19100847885188e-11 Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 loading translations [en]... done making output directory... done [autosummary] generating autosummary for: api.rst, contributing.rst, demos.rst, demos/demo_axis.md, demos/demo_biharmonic.md, demos/demo_cahn-hilliard.md, demos/demo_elasticity.md, demos/demo_gmsh.md, demos/demo_half_loaded_waveguide.md, demos/demo_hdg.md, ..., demos/demo_pyvista.md, demos/demo_scattering_boundary_conditions.md, demos/demo_static-condensation.md, demos/demo_stokes.md, demos/demo_tnt-elements.md, demos/demo_types.md, developer.rst, index.rst, installation.rst, styleguide_cpp.rst [autosummary] generating autosummary for: /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.common.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.fem.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.log.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.cpp.mesh.rst, ..., /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.geometry.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.graph.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.gmshio.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.io.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.jit.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.la.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.mesh.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.nls.petsc.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.pkgconfig.rst, /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/generated/dolfinx.plot.rst myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'dollarmath'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 29 source files that are out of date updating environment: [new config] 54 added, 0 changed, 0 removed reading sources... [ 2%] api reading sources... [ 4%] contributing reading sources... [ 6%] demos reading sources... [ 7%] demos/demo_axis reading sources... [ 9%] demos/demo_biharmonic reading sources... [ 11%] demos/demo_cahn-hilliard reading sources... [ 13%] demos/demo_elasticity reading sources... [ 15%] demos/demo_gmsh reading sources... [ 17%] demos/demo_half_loaded_waveguide reading sources... [ 19%] demos/demo_hdg reading sources... [ 20%] demos/demo_helmholtz reading sources... [ 22%] demos/demo_interpolation-io reading sources... [ 24%] demos/demo_lagrange_variants reading sources... [ 26%] demos/demo_mixed-poisson reading sources... [ 28%] demos/demo_navier-stokes reading sources... [ 30%] demos/demo_pml reading sources... [ 31%] demos/demo_poisson reading sources... [ 33%] demos/demo_poisson_matrix_free reading sources... [ 35%] demos/demo_pyamg reading sources... [ 37%] demos/demo_pyvista reading sources... [ 39%] demos/demo_scattering_boundary_conditions reading sources... [ 41%] demos/demo_static-condensation reading sources... [ 43%] demos/demo_stokes reading sources... [ 44%] demos/demo_tnt-elements reading sources... [ 46%] demos/demo_types reading sources... [ 48%] developer reading sources... [ 50%] generated/dolfinx.common reading sources... [ 52%] generated/dolfinx.cpp.common reading sources... [ 54%] generated/dolfinx.cpp.fem reading sources... [ 56%] generated/dolfinx.cpp.fem.petsc reading sources... [ 57%] generated/dolfinx.cpp.geometry reading sources... [ 59%] generated/dolfinx.cpp.graph reading sources... [ 61%] generated/dolfinx.cpp.io reading sources... [ 63%] generated/dolfinx.cpp.la reading sources... [ 65%] generated/dolfinx.cpp.log reading sources... [ 67%] generated/dolfinx.cpp.mesh reading sources... [ 69%] generated/dolfinx.cpp.nls reading sources... [ 70%] generated/dolfinx.cpp.nls.petsc reading sources... [ 72%] generated/dolfinx.cpp.refinement reading sources... [ 74%] generated/dolfinx.fem reading sources... 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[100%] styleguide_cpp looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_axis.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_axis /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_biharmonic.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_biharmonic /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_cahn-hilliard.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_cahn-hilliard /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_elasticity.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_elasticity /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_gmsh.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_gmsh /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_half_loaded_waveguide.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_half_loaded_waveguide /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_hdg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_hdg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_helmholtz.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_helmholtz /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_interpolation-io.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_interpolation-io /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_lagrange_variants.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_lagrange_variants /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_mixed-poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_mixed-poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_navier-stokes.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_navier-stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pml.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pml /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_poisson.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_poisson /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyamg.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyamg /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_pyvista.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_pyvista /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_scattering_boundary_conditions.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_scattering_boundary_conditions /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_static-condensation.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_static-condensation /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_stokes.md: document is referenced in multiple toctrees: ['demos', 'demos', 'demos'], selecting: demos <- demos/demo_stokes /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_tnt-elements.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_tnt-elements /build/reproducible-path/fenics-dolfinx-0.9.0/python/doc/source/demos/demo_types.md: document is referenced in multiple toctrees: ['demos', 'demos'], selecting: demos <- demos/demo_types done preparing documents... done copying assets... copying downloadable files... [ 6%] demos/demo_biharmonic.py copying downloadable files... [ 12%] demos/demo_cahn-hilliard.py copying downloadable files... [ 18%] demos/demo_elasticity.py copying downloadable files... [ 24%] demos/demo_gmsh.py copying downloadable files... [ 29%] demos/demo_hdg.py copying downloadable files... [ 35%] demos/demo_interpolation-io.py copying downloadable files... [ 41%] demos/demo_lagrange_variants.py copying downloadable files... [ 47%] demos/demo_mixed-poisson.py copying downloadable files... [ 53%] demos/demo_mixed-poisson.ipynb copying downloadable files... [ 59%] demos/demo_navier-stokes.py copying downloadable files... [ 65%] demos/demo_poisson.py copying downloadable files... [ 71%] demos/demo_poisson_matrix_free.py copying downloadable files... [ 76%] demos/demo_poisson_matrix_free.ipynb copying downloadable files... [ 82%] demos/demo_pyamg.py copying downloadable files... [ 88%] demos/demo_stokes.py copying downloadable files... [ 94%] demos/demo_tnt-elements.py copying downloadable files... [100%] demos/demo_types.py copying static files... done copying extra files... done copying assets: done writing output... [ 2%] api writing output... [ 4%] contributing writing output... [ 6%] demos writing output... [ 7%] demos/demo_axis writing output... [ 9%] demos/demo_biharmonic writing output... [ 11%] demos/demo_cahn-hilliard writing output... [ 13%] demos/demo_elasticity writing output... [ 15%] demos/demo_gmsh writing output... [ 17%] demos/demo_half_loaded_waveguide writing output... [ 19%] demos/demo_hdg writing output... [ 20%] demos/demo_helmholtz writing output... [ 22%] demos/demo_interpolation-io writing output... [ 24%] demos/demo_lagrange_variants writing output... [ 26%] demos/demo_mixed-poisson writing output... [ 28%] demos/demo_navier-stokes writing output... [ 30%] demos/demo_pml writing output... [ 31%] demos/demo_poisson writing output... [ 33%] demos/demo_poisson_matrix_free writing output... 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[ 70%] generated/dolfinx.cpp.nls.petsc writing output... [ 72%] generated/dolfinx.cpp.refinement writing output... [ 74%] generated/dolfinx.fem writing output... [ 76%] generated/dolfinx.fem.petsc writing output... [ 78%] generated/dolfinx.geometry writing output... [ 80%] generated/dolfinx.graph writing output... [ 81%] generated/dolfinx.io writing output... [ 83%] generated/dolfinx.io.gmshio writing output... [ 85%] generated/dolfinx.jit writing output... [ 87%] generated/dolfinx.la writing output... [ 89%] generated/dolfinx.mesh writing output... [ 91%] generated/dolfinx.nls.petsc writing output... [ 93%] generated/dolfinx.pkgconfig writing output... [ 94%] generated/dolfinx.plot writing output... [ 96%] index writing output... [ 98%] installation writing output... [100%] styleguide_cpp generating indices... genindex py-modindex done highlighting module code... [ 3%] dolfinx.common highlighting module code... [ 7%] dolfinx.cpp.common highlighting module code... [ 10%] dolfinx.cpp.fem highlighting module code... [ 14%] dolfinx.cpp.geometry highlighting module code... [ 17%] dolfinx.cpp.graph highlighting module code... [ 21%] dolfinx.cpp.io highlighting module code... [ 24%] dolfinx.cpp.la highlighting module code... [ 28%] dolfinx.cpp.log highlighting module code... [ 31%] dolfinx.cpp.mesh highlighting module code... [ 34%] dolfinx.cpp.nls.petsc highlighting module code... [ 38%] dolfinx.cpp.refinement highlighting module code... [ 41%] dolfinx.fem highlighting module code... [ 45%] dolfinx.fem.assemble highlighting module code... [ 48%] dolfinx.fem.bcs highlighting module code... [ 52%] dolfinx.fem.dofmap highlighting module code... [ 55%] dolfinx.fem.element highlighting module code... [ 59%] dolfinx.fem.forms highlighting module code... [ 62%] dolfinx.fem.function highlighting module code... [ 66%] dolfinx.fem.petsc highlighting module code... [ 69%] dolfinx.geometry highlighting module code... [ 72%] dolfinx.graph highlighting module code... [ 76%] dolfinx.io.gmshio highlighting module code... [ 79%] dolfinx.io.utils highlighting module code... [ 83%] dolfinx.jit highlighting module code... [ 86%] dolfinx.la highlighting module code... [ 90%] dolfinx.mesh highlighting module code... [ 93%] dolfinx.nls.petsc highlighting module code... [ 97%] dolfinx.pkgconfig highlighting module code... [100%] dolfinx.plot writing additional pages... search done copying images... [ 17%] demos/demo_lagrange_variants_equispaced_10.png copying images... [ 33%] demos/demo_lagrange_variants_gll_10.png copying images... [ 50%] demos/demo_lagrange_variants_interpolation_equispaced.png copying images... [ 67%] demos/demo_lagrange_variants_interpolation_gll_warped.png copying images... [ 83%] demos/demo_tnt-elements_degrees_vs_error.png copying images... [100%] demos/demo_tnt-elements_ndofs_vs_error.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in .pybuild/html. dh_numpy3 -i make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -a sed "s/set(CMAKE_IMPORT_FILE_VERSION 1)/set(CMAKE_IMPORT_FILE_VERSION 1)\n\nif(PETSC_SCALAR_COMPLEX)\n set(LIB_NAME_EXT \"_complex\")\nelse()\n set(LIB_NAME_EXT \"_real\")\nendif()/; \ s/libdolfinx_real.so/libdolfinx\${LIB_NAME_EXT}.so/g" \ -i debian/libdolfinx-dev/usr/lib/x86_64-linux-gnu/cmake/dolfinx/DOLFINXTargets-relwithdebinfo.cmake make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_install -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex dh_installdocs -O--buildsystem=cmake dh_installdocs: warning: Cannot auto-detect main package for dolfinx-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3-arch make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -a dh_numpy3 -a mkdir -p debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib mv debian/python3-dolfinx-real/usr/lib/python3 debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib rm -rf debian/python3-dolfinx-real//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/dolfinx_utils mkdir -p debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib mv debian/python3-dolfinx-complex/usr/lib/python3 debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib rm -rf debian/python3-dolfinx-complex//usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/dolfinx_utils make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_python3 -O--buildsystem=cmake -Nlibdolfinx-dev -Nlibdolfinx-real-dev -Nlibdolfinx-complex-dev -Nlibdolfinx-real0.9 -Nlibdolfinx-complex0.9 -Npython3-dolfinx -Npython3-dolfinx-real -Npython3-dolfinx-complex E: dh_python3 dh_python3:198: no package to act on (python3-foo or one with ${python3:Depends} in Depends) dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_compress -X.py -X.cpp -X.h -X.pdf -X.ufl make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_dwz -Xcpp.cpython make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_strip make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_strip --package=libdolfinx-real0.9 -Xcomplex -Xpython dh_strip --package=libdolfinx-complex0.9 -Xreal -Xpython dh_strip --package=python3-dolfinx-real make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_installdeb -O--buildsystem=cmake debian/rules override_dh_gencontrol make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' echo "python3-petsc4py-real:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/python3-dolfinx-real.substvars echo "python3-petsc4py-complex:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-complex (>= 3.21), python3-petsc4py-complex (<< 3.22), python3-slepc4py-complex (>= 3.21), python3-slepc4py-complex (<< 3.22)" >> debian/python3-dolfinx-complex.substvars echo "python-petsc4py-alt:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/libdolfinx-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.21-dev, libslepc-real3.21-dev" -Vpetsc-complex:Depends="libpetsc-complex3.21-dev, libslepc-complex3.21-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ \ -Vnanobind:Upstream-Version=2.2 -Vnanobind:Next-Upstream-Version=3 dpkg-gencontrol: warning: package libdolfinx-real-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3252912 and its subdirectories I: Current time: Wed Nov 13 00:25:35 +14 2024 I: pbuilder-time-stamp: 1731407135 + false + set +x Tue Nov 12 10:25:35 UTC 2024 I: Signing ./b2/fenics-dolfinx_0.9.0-2_amd64.buildinfo as fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc Tue Nov 12 10:25:35 UTC 2024 I: Signed ./b2/fenics-dolfinx_0.9.0-2_amd64.buildinfo as ./b2/fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc Tue Nov 12 10:25:35 UTC 2024 - build #2 for fenics-dolfinx/unstable/amd64 on ionos1-amd64 done. Starting cleanup. All cleanup done. Tue Nov 12 10:25:35 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-v66hVeZi, removing. /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl: total 748 drwxr-xr-x 2 jenkins jenkins 4096 Nov 12 04:40 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 12 10:25 b2 -rw-r--r-- 1 jenkins jenkins 4211 Nov 10 08:59 fenics-dolfinx_0.9.0-2.dsc -rw------- 1 jenkins jenkins 744924 Nov 12 04:40 rbuildlog.dmofCNI /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1: total 28524 -rw-r--r-- 1 jenkins jenkins 739276 Nov 12 04:40 build.log -rw-r--r-- 1 jenkins jenkins 1237608 Nov 12 04:40 dolfinx-doc_0.9.0-2_all.deb -rw-r--r-- 1 jenkins jenkins 44840 Nov 12 04:40 fenics-dolfinx_0.9.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 4211 Nov 12 04:40 fenics-dolfinx_0.9.0-2.dsc -rw-r--r-- 1 jenkins jenkins 25323 Nov 12 04:40 fenics-dolfinx_0.9.0-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 26205 Nov 12 04:40 fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 4797 Nov 12 04:40 fenics-dolfinx_0.9.0-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1265 Nov 12 04:40 fenics-dolfinx_0.9.0-2_source.changes -rw-r--r-- 1 jenkins jenkins 48080 Nov 12 04:40 libdolfinx-complex-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 11431248 Nov 12 04:40 libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 575596 Nov 12 04:40 libdolfinx-complex0.9_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 201104 Nov 12 04:40 libdolfinx-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 48072 Nov 12 04:40 libdolfinx-real-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 11428888 Nov 12 04:40 libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 575652 Nov 12 04:40 libdolfinx-real0.9_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1328144 Nov 12 04:40 python3-dolfinx-complex_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1328024 Nov 12 04:40 python3-dolfinx-real_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 49412 Nov 12 04:40 python3-dolfinx_0.9.0-2_amd64.deb /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2: total 28460 -rw-r--r-- 1 jenkins jenkins 741228 Nov 12 10:25 build.log -rw-r--r-- 1 jenkins jenkins 1237500 Nov 12 10:25 dolfinx-doc_0.9.0-2_all.deb -rw-r--r-- 1 jenkins jenkins 44840 Nov 12 10:25 fenics-dolfinx_0.9.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 4211 Nov 12 10:25 fenics-dolfinx_0.9.0-2.dsc -rw-r--r-- 1 jenkins jenkins 25312 Nov 12 10:25 fenics-dolfinx_0.9.0-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 26194 Nov 12 10:25 fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 4797 Nov 12 10:25 fenics-dolfinx_0.9.0-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1265 Nov 12 10:25 fenics-dolfinx_0.9.0-2_source.changes -rw-r--r-- 1 jenkins jenkins 48080 Nov 12 10:25 libdolfinx-complex-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 11431248 Nov 12 10:25 libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 575596 Nov 12 10:25 libdolfinx-complex0.9_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 201104 Nov 12 10:25 libdolfinx-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 48072 Nov 12 10:25 libdolfinx-real-dev_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 11428888 Nov 12 10:25 libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 575652 Nov 12 10:25 libdolfinx-real0.9_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1328144 Nov 12 10:25 python3-dolfinx-complex_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1328024 Nov 12 10:25 python3-dolfinx-real_0.9.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 49412 Nov 12 10:25 python3-dolfinx_0.9.0-2_amd64.deb Tue Nov 12 10:25:36 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Tue Nov 12 10:25:37 UTC 2024 I: fenics-dolfinx_0.9.0-2_amd64.changes: Format: 1.8 Date: Sat, 09 Nov 2024 07:55:06 +0000 Source: fenics-dolfinx Binary: dolfinx-doc libdolfinx-complex-dev libdolfinx-complex0.9 libdolfinx-complex0.9-dbgsym libdolfinx-dev libdolfinx-real-dev libdolfinx-real0.9 libdolfinx-real0.9-dbgsym python3-dolfinx python3-dolfinx-complex python3-dolfinx-real Architecture: all amd64 Version: 1:0.9.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Francesco Ballarin Description: dolfinx-doc - Documentation and demo programs for DOLFIN libdolfinx-complex-dev - Shared links and header files for DOLFIN (complex numbers) libdolfinx-complex0.9 - Shared libraries for DOLFIN libdolfinx-dev - Shared links and header files for DOLFIN libdolfinx-real-dev - Shared links and header files for DOLFIN (real numbers) libdolfinx-real0.9 - Shared libraries for DOLFIN python3-dolfinx - Python interface for DOLFIN (Python 3) python3-dolfinx-complex - Python interface for DOLFIN (Python 3) python3-dolfinx-real - Python interface for DOLFIN (Python 3) Changes: fenics-dolfinx (1:0.9.0-2) unstable; urgency=medium . * Upload to unstable Checksums-Sha1: ee064801d5971a6857fae3b26563f5d33273824a 1237608 dolfinx-doc_0.9.0-2_all.deb cee4bebc8e926a95b874d5a620c89bb282835714 25323 fenics-dolfinx_0.9.0-2_amd64.buildinfo 698e46b7c3f5a6d2b01d076d39181237de3ca4b8 48080 libdolfinx-complex-dev_0.9.0-2_amd64.deb 61f448bc09f8af60ababc1ab5afc2400604954b5 11431248 libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb 7a8fcda2a448bcf2fb7dccabd35089ee965d7699 575596 libdolfinx-complex0.9_0.9.0-2_amd64.deb e5576d669c9793eebdd76320d7c59bc0b457d0ca 201104 libdolfinx-dev_0.9.0-2_amd64.deb eb3cd0bc4253fddc222762deb056d87db939cc9c 48072 libdolfinx-real-dev_0.9.0-2_amd64.deb a48a07ead2ecaae6ebca46ebe49787b70342118d 11428888 libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb 7d38d3ef896812e7fc9f75f246ce72c3748d35ef 575652 libdolfinx-real0.9_0.9.0-2_amd64.deb 3b5e4e38b39b41bb120e1de82ca3d667acfd6f5e 1328144 python3-dolfinx-complex_0.9.0-2_amd64.deb da92f30eb3c0e6bc22b92555c1ab36b0574a741c 1328024 python3-dolfinx-real_0.9.0-2_amd64.deb 052bdbe4bfbc864fa0fd8ca65c51c0e144865b19 49412 python3-dolfinx_0.9.0-2_amd64.deb Checksums-Sha256: 5b33b7900cfe336970474641fe37325443d3c5cf9174851b4b6db1b00bb0d0ad 1237608 dolfinx-doc_0.9.0-2_all.deb f29553d111bd1b09871d939c15250f2b3c2895d74ab97c68df87cb50a0e2652d 25323 fenics-dolfinx_0.9.0-2_amd64.buildinfo 9ca52e9985187d79b9925f6040a4546655424ade9501f8ca8dcdf6f1ebcf20d1 48080 libdolfinx-complex-dev_0.9.0-2_amd64.deb afa5816a6fcfb64f39ad8ee23000c12e41f5c8daa21cb7e5838c996cccb1694b 11431248 libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb 0185a5e67468c23b7f47391476901be2695c2e68e7157060fb6cee5e7afe0514 575596 libdolfinx-complex0.9_0.9.0-2_amd64.deb 735829a269812fffebf9572554a62fad7eae8ac1fa19dc2262daa426d2a4bf3b 201104 libdolfinx-dev_0.9.0-2_amd64.deb 8448097cd92922e9ab07c2787813201c878937e86149f6c2207a266ab11a291f 48072 libdolfinx-real-dev_0.9.0-2_amd64.deb 5ab4d2339949c4a33ce043cb12927e63a3f5175d4c85492ae52b5ee545e8eae0 11428888 libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb 44f6e8cd389e79a629994e45207ec0947693e75d8808729d6b4ce612ba2df37a 575652 libdolfinx-real0.9_0.9.0-2_amd64.deb 86a843659e0eacb0c32460aa0ab71f60ea7e25b8a7b2f13ebb609170280c098c 1328144 python3-dolfinx-complex_0.9.0-2_amd64.deb 02297d4e1b750bd4edc4599f1e038f9edb977c92adfdfd4d437f5913db723330 1328024 python3-dolfinx-real_0.9.0-2_amd64.deb 81841890100b8038b268e1806dfa8e54728612ecf56a9d20c061742064dfce5c 49412 python3-dolfinx_0.9.0-2_amd64.deb Files: e0da5cc0f02546fac4b76e9d975dbec1 1237608 doc optional dolfinx-doc_0.9.0-2_all.deb 64e99d1210114e3a34b9796c2b5ed1ce 25323 math optional fenics-dolfinx_0.9.0-2_amd64.buildinfo d38886bce103c8614f6ce67bfd9f8562 48080 libdevel optional libdolfinx-complex-dev_0.9.0-2_amd64.deb 041f3c9c6dd1d4a6acc718d20ec30b96 11431248 debug optional libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb 54a4238aa0d91cda63aae393c76c26b2 575596 libs optional libdolfinx-complex0.9_0.9.0-2_amd64.deb 76e049e250509d1151d2bfc9d700d38f 201104 libdevel optional libdolfinx-dev_0.9.0-2_amd64.deb 1807db11d9ffec0530911da140178590 48072 libdevel optional libdolfinx-real-dev_0.9.0-2_amd64.deb 9d7ff5c0ed7ce5575049acc5e0b1d8b5 11428888 debug optional libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb 3f622753d56f69f743dd23e563264354 575652 libs optional libdolfinx-real0.9_0.9.0-2_amd64.deb 8183c43bf86f0a0f48b9372244dc3a33 1328144 python optional python3-dolfinx-complex_0.9.0-2_amd64.deb eaefbee3be7848881c945aa367af7bd6 1328024 python optional python3-dolfinx-real_0.9.0-2_amd64.deb 8705245f3359c7db25cd43fc00234a60 49412 python optional python3-dolfinx_0.9.0-2_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/fenics-dolfinx_0.9.0-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/fenics-dolfinx_0.9.0-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/fenics-dolfinx_0.9.0-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/fenics-dolfinx_0.9.0-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-12 04:40:23.773161721 +0000 +++ b2/build.log 2024-11-12 10:25:36.098025457 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Dec 14 21:44:37 -12 2025 -I: pbuilder-time-stamp: 1765791877 +I: Current time: Tue Nov 12 18:40:27 +14 2024 +I: pbuilder-time-stamp: 1731386427 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -40,52 +40,84 @@ dpkg-source: info: applying test_adios2_skip.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/500505/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 12 04:40 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='65ca1a013bcc482d9ad70d68a25fe160' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='500505' - PS1='# ' - PS2='> ' + INVOCATION_ID=c8cee752593048ff9f6b8a0f8fa67e09 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3252912 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_Eds6 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1 --logfile b1/build.log fenics-dolfinx_0.9.0-2.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/pbuilderrc_kRsm --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2 --logfile b2/build.log fenics-dolfinx_0.9.0-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/500505/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -794,7 +826,7 @@ Get: 541 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Get: 542 http://deb.debian.org/debian unstable/main amd64 python3-wheel-whl all 0.44.0-2 [70.1 kB] Get: 543 http://deb.debian.org/debian unstable/main amd64 python3-virtualenv all 20.27.0+ds-1 [71.1 kB] -Fetched 446 MB in 20s (22.2 MB/s) +Fetched 446 MB in 19s (23.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) @@ -2522,8 +2554,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Dec 15 09:49:46 UTC 2025. -Universal Time is now: Mon Dec 15 09:49:46 UTC 2025. +Local time is now: Tue Nov 12 04:49:06 UTC 2024. +Universal Time is now: Tue Nov 12 04:49:06 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:amd64 (1.83.0-3.2) ... @@ -3061,7 +3093,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-2_source.changes +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fenics-dolfinx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenics-dolfinx_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenics-dolfinx dpkg-buildpackage: info: source version 1:0.9.0-2 dpkg-buildpackage: info: source distribution unstable @@ -3207,8 +3243,8 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (6.1s) --- Generating done (0.0s) +-- Configuring done (26.4s) +-- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: @@ -3342,8 +3378,8 @@ * KaHIP, A family of graph partitioning programs, Parallel graph partitioning --- Configuring done (7.2s) --- Generating done (0.0s) +-- Configuring done (30.1s) +-- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -3363,7 +3399,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real - cd obj-x86_64-linux-gnu-real && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-real && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real//CMakeFiles/progress.marks @@ -3375,89 +3411,89 @@ make[4]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' make -f dolfinx/CMakeFiles/dolfinx.dir/build.make dolfinx/CMakeFiles/dolfinx.dir/build make[4]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o -[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DirichletBC.cpp.o -[ 18%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/CoordinateElement.cpp.o -[ 23%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/timing.cpp.o -[ 25%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogManager.cpp.o -[ 27%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/DofMap.cpp.o +[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -MF CMakeFiles/dolfinx.dir/common/defines.cpp.o.d -o CMakeFiles/dolfinx.dir/common/defines.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp +[ 4%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -MF CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o.d -o CMakeFiles/dolfinx.dir/common/IndexMap.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/IndexMap.cpp -[ 30%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/ElementDofLayout.cpp.o +[ 6%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp +[ 9%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o +[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp -[ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o -MF CMakeFiles/dolfinx.dir/common/Table.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Table.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp +[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o -MF CMakeFiles/dolfinx.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfinx.dir/common/Timer.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Timer.cpp -[ 34%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o +[ 16%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/TimeLogger.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include 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Linking CXX shared library libdolfinx_real.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/dolfinx && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx.dir/link.txt --verbose=1 @@ -3469,7 +3505,7 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real' PETSC_DIR=/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex SLEPC_DIR=/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex dh_auto_build --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex - cd obj-x86_64-linux-gnu-complex && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu-complex && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake 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dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o -[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o +[ 2%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/defines.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -DDOLFINX_GIT_COMMIT_HASH=\"debian_1:0.9.0-2\" -DUFCX_SIGNATURE=\"475c28073ccb3c02130118a9af65e8309bf276c3\" -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem 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/usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/MPI.cpp.o -MF CMakeFiles/dolfinx.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfinx.dir/common/MPI.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/MPI.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/common/log.cpp.o -MF CMakeFiles/dolfinx.dir/common/log.cpp.o.d -o CMakeFiles/dolfinx.dir/common/log.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/log.cpp +[ 11%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Table.cpp.o +[ 13%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/common/Timer.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI 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/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/Table.cpp +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time 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+[ 32%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/FiniteElement.cpp.o +[ 34%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/fem/dofmapbuilder.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include 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&& /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o -MF CMakeFiles/dolfinx.dir/fem/sparsitybuild.cpp.o.d -o 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/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -MF CMakeFiles/dolfinx.dir/fem/petsc.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/petsc.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.cpp +[ 44%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/fem/utils.cpp.o -MF CMakeFiles/dolfinx.dir/fem/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/fem/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.cpp cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -MF CMakeFiles/dolfinx.dir/graph/ordering.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/ordering.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.cpp +[ 46%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partitioners.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partitioners.cpp -[ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -[ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o +[ 48%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/graph/partition.cpp.o -MF CMakeFiles/dolfinx.dir/graph/partition.cpp.o.d -o CMakeFiles/dolfinx.dir/graph/partition.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/partition.cpp +[ 51%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -MF CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o.d -o CMakeFiles/dolfinx.dir/io/ADIOS2Writers.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.cpp +[ 53%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/cells.cpp.o -MF CMakeFiles/dolfinx.dir/io/cells.cpp.o.d -o CMakeFiles/dolfinx.dir/io/cells.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/cells.cpp -[ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -[ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o +[ 55%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfinx.dir/io/HDF5Interface.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/HDF5Interface.cpp -[ 65%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_mesh.cpp.o +[ 58%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o +cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o -MF CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o.d -o CMakeFiles/dolfinx.dir/io/VTKFile.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/VTKFile.cpp +[ 60%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o -MF CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o.d -o CMakeFiles/dolfinx.dir/io/vtk_utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/vtk_utils.cpp +[ 62%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -MF CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o.d -o CMakeFiles/dolfinx.dir/io/XDMFFile.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/XDMFFile.cpp +[ 65%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/io/xdmf_function.cpp.o cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/c++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Ddolfinx_EXPORTS -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/graphbuild.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/graphbuild.cpp -[ 86%] Building CXX object dolfinx/CMakeFiles/dolfinx.dir/mesh/cell_types.cpp.o -cd 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-I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -I/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -isystem /usr/include/scotch -fpermissive -O2 -g -DNDEBUG -std=gnu++20 -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT dolfinx/CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -MF CMakeFiles/dolfinx.dir/mesh/utils.cpp.o.d -o CMakeFiles/dolfinx.dir/mesh/utils.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.cpp [100%] Linking CXX shared library libdolfinx_complex.so cd /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/dolfinx && /usr/bin/cmake -E 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/usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmpdom0b7ux/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmpdom0b7ux/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmpdom0b7ux/build/CMakeFiles /tmp/tmpdom0b7ux/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmp5k3kk8yb/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp5k3kk8yb/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmp5k3kk8yb/build/CMakeFiles /tmp/tmp5k3kk8yb/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmpdom0b7ux/build' +gmake[3]: Entering directory '/tmp/tmp5k3kk8yb/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' -cd /tmp/tmpdom0b7ux/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmpdom0b7ux/build' +gmake[4]: Entering directory '/tmp/tmp5k3kk8yb/build' +cd /tmp/tmp5k3kk8yb/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp5k3kk8yb/build /tmp/tmp5k3kk8yb/build /tmp/tmp5k3kk8yb/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp5k3kk8yb/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' +gmake[4]: Entering directory '/tmp/tmp5k3kk8yb/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -3823,14 +3859,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmpdom0b7ux/build' +gmake[4]: Leaving directory '/tmp/tmp5k3kk8yb/build' [ 45%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' -cd /tmp/tmpdom0b7ux/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build /tmp/tmpdom0b7ux/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmpdom0b7ux/build' +gmake[4]: Entering directory '/tmp/tmp5k3kk8yb/build' +cd /tmp/tmp5k3kk8yb/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp5k3kk8yb/build /tmp/tmp5k3kk8yb/build /tmp/tmp5k3kk8yb/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmp5k3kk8yb/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmpdom0b7ux/build' +gmake[4]: Entering directory '/tmp/tmp5k3kk8yb/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.12 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 54%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -3858,16 +3894,16 @@ [100%] Linking CXX shared module cpp.cpython-312-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,-z,relro -shared -o cpp.cpython-312-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu/libdolfinx_real.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib/libpetsc_real.so -gmake[4]: Leaving directory '/tmp/tmpdom0b7ux/build' +gmake[4]: Leaving directory '/tmp/tmp5k3kk8yb/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmpdom0b7ux/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmpdom0b7ux/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmpdom0b7ux/build' +gmake[3]: Leaving directory '/tmp/tmp5k3kk8yb/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmp5k3kk8yb/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmp5k3kk8yb/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmpdom0b7ux/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmpdom0b7ux/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib" +-- Installing: /tmp/tmp5k3kk8yb/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmp5k3kk8yb/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-real/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-real/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-real/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl @@ -4002,29 +4038,29 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -23.18s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -9.80s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -9.50s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] -7.64s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -7.62s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.hexahedron-Lagrange] -6.05s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_matrix_assembly_block[GhostMode.none] -5.89s call test/unit/fem/test_element_integrals.py::test_plus_minus[float32-CellType.hexahedron-DG] -5.53s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.hexahedron-DG] -5.38s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -5.36s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -5.14s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -5.06s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.triangle-DG] -4.70s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] -4.31s call test/unit/fem/test_element_integrals.py::test_plus_minus[float32-CellType.quadrilateral-Lagrange] -4.30s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dx-Lagrange-3-4] -4.16s call test/unit/fem/test_element_integrals.py::test_plus_minus[float64-CellType.quadrilateral-DG] -4.09s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -4.08s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -4.00s call test/unit/fem/test_element_integrals.py::test_plus_minus[complex64-CellType.tetrahedron-Lagrange] -3.93s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -= 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 1174.88s (0:19:34) = +76.39s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +35.72s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +34.77s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +34.37s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] +33.54s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-NCE] +32.10s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +29.98s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAF] +29.39s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +27.98s call test/unit/fem/test_element_integrals.py::test_facet_integral[complex64-CellType.hexahedron] +27.51s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +27.21s call test/unit/fem/test_assemble_domains.py::test_assembly_dx_domains[meshtags-GhostMode.none] +26.53s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] +26.19s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +26.02s call test/unit/fem/test_dof_permuting.py::test_integral[3-tetrahedron-N2curl] +25.09s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-1-4] +24.79s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] +24.23s call test/unit/fem/test_element_integrals.py::test_facet_integral[float32-CellType.hexahedron] +23.26s call test/unit/fem/test_element_integrals.py::test_facet_integral[float64-CellType.hexahedron] +22.73s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +22.03s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[ds-Discontinuous Lagrange-3-4] += 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 7 warnings in 6499.44s (1:48:19) = dh_auto_install -a --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex - cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-complex && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4163,7 +4199,7 @@ * Building wheel... *** scikit-build-core 0.10.7 using CMake 3.30.5 (wheel) *** Configuring CMake... -loading initial cache file /tmp/tmp32wku1zv/build/CMakeInit.txt +loading initial cache file /tmp/tmprwg0zyqw/build/CMakeInit.txt Re-run cmake no build system arguments -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 @@ -4218,24 +4254,24 @@ -- Found DOLFINx at /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/cmake/dolfinx -- Found petsc4py include directory at /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -- Found mpi4py include directory at /usr/lib/python3/dist-packages/mpi4py/include --- Configuring done (2.3s) --- Generating done (0.0s) --- Build files have been written to: /tmp/tmp32wku1zv/build +-- Configuring done (21.3s) +-- Generating done (0.1s) +-- Build files have been written to: /tmp/tmprwg0zyqw/build *** Building project with Unix Makefiles... -Change Dir: '/tmp/tmp32wku1zv/build' +Change Dir: '/tmp/tmprwg0zyqw/build' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -gmake[2]: Entering directory '/tmp/tmp32wku1zv/build' -/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmp32wku1zv/build --check-build-system CMakeFiles/Makefile.cmake 0 -/usr/bin/cmake -E cmake_progress_start /tmp/tmp32wku1zv/build/CMakeFiles /tmp/tmp32wku1zv/build//CMakeFiles/progress.marks +gmake[2]: Entering directory '/tmp/tmprwg0zyqw/build' +/usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/python -B/tmp/tmprwg0zyqw/build --check-build-system CMakeFiles/Makefile.cmake 0 +/usr/bin/cmake -E cmake_progress_start /tmp/tmprwg0zyqw/build/CMakeFiles /tmp/tmprwg0zyqw/build//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all -gmake[3]: Entering directory '/tmp/tmp32wku1zv/build' +gmake[3]: Entering directory '/tmp/tmprwg0zyqw/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/depend -gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' -cd /tmp/tmp32wku1zv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' +gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' +cd /tmp/tmprwg0zyqw/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build/CMakeFiles/nanobind-static.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' /usr/bin/gmake -f CMakeFiles/nanobind-static.dir/build.make CMakeFiles/nanobind-static.dir/build -gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' +gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' [ 4%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DNB_COMPACT_ASSERTIONS -I/usr/include/python3.12 -I/usr/share/nanobind/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -fPIC -fvisibility=hidden -ffunction-sections -fdata-sections -fno-strict-aliasing -MD -MT CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -MF CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o.d -o CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o -c /usr/share/nanobind/src/nb_internals.cpp [ 8%] Building CXX object CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o @@ -4261,14 +4297,14 @@ /usr/bin/cmake -E cmake_link_script CMakeFiles/nanobind-static.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-ar qc libnanobind-static.a "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_internals.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_func.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_type.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_enum.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_ndarray.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/nb_static_property.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/common.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/error.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/trampoline.cpp.o" "CMakeFiles/nanobind-static.dir/usr/share/nanobind/src/implicit.cpp.o" /usr/bin/x86_64-linux-gnu-ranlib libnanobind-static.a -gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' +gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' [ 45%] Built target nanobind-static /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend -gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' -cd /tmp/tmp32wku1zv/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build /tmp/tmp32wku1zv/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" -gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' +gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' +cd /tmp/tmprwg0zyqw/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenics-dolfinx-0.9.0/python /build/reproducible-path/fenics-dolfinx-0.9.0/python /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build /tmp/tmprwg0zyqw/build/CMakeFiles/cpp.dir/DependInfo.cmake "--color=" +gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build -gmake[4]: Entering directory '/tmp/tmp32wku1zv/build' +gmake[4]: Entering directory '/tmp/tmprwg0zyqw/build' [ 50%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o /usr/bin/x86_64-linux-gnu-g++ -DADIOS2_USE_MPI -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_ADIOS2 -DHAS_PETSC -DHAS_PETSC4PY -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -Dcpp_EXPORTS -Dcxx_std_20 -I/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/python3/dist-packages/petsc4py/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.12 -I/usr/share/nanobind/include -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/x86_64-linux-gnu/openmpi/include -isystem /usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/include/adios2/build/mpi -isystem /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/include -isystem /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/include -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-stack-protector -ffunction-sections -fdata-sections -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -MF CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o.d -o CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o -c /build/reproducible-path/fenics-dolfinx-0.9.0/python/dolfinx/wrappers/dolfinx.cpp [ 54%] Building CXX object CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o @@ -4296,16 +4332,16 @@ [100%] Linking CXX shared module cpp.cpython-312-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/x86_64-linux-gnu-g++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/fenics-dolfinx-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -isystem /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/include -O3 -DNDEBUG -Wl,-s -Wl,--gc-sections -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/openmpi/lib -Wl,-z,relro -shared -o cpp.cpython-312-x86_64-linux-gnu.so CMakeFiles/cpp.dir/dolfinx/wrappers/dolfinx.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/assemble.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/common.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/fem.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/geometry.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/graph.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/io.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/la.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/log.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/mesh.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/petsc.cpp.o CMakeFiles/cpp.dir/dolfinx/wrappers/refinement.cpp.o -Wl,-rpath,/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib: libnanobind-static.a /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu/libdolfinx_complex.so.0.9.0 /usr/lib/x86_64-linux-gnu/libpugixml.so.1.14 /usr/lib/x86_64-linux-gnu/libbasix.so.0.9.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libspdlog.so.1.12.0 /usr/lib/x86_64-linux-gnu/libfmt.so.10.1.0 /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11_mpi.so.2.10.1 /usr/lib/x86_64-linux-gnu/libadios2_mpi_cxx11.so.2.10.1 /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so /usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib/libslepc_complex.so /usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib/libpetsc_complex.so -gmake[4]: Leaving directory '/tmp/tmp32wku1zv/build' +gmake[4]: Leaving directory '/tmp/tmprwg0zyqw/build' [100%] Built target cpp -gmake[3]: Leaving directory '/tmp/tmp32wku1zv/build' -/usr/bin/cmake -E cmake_progress_start /tmp/tmp32wku1zv/build/CMakeFiles 0 -gmake[2]: Leaving directory '/tmp/tmp32wku1zv/build' +gmake[3]: Leaving directory '/tmp/tmprwg0zyqw/build' +/usr/bin/cmake -E cmake_progress_start /tmp/tmprwg0zyqw/build/CMakeFiles 0 +gmake[2]: Leaving directory '/tmp/tmprwg0zyqw/build' *** Installing project into wheel... -- Install configuration: "Release" --- Installing: /tmp/tmp32wku1zv/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so --- Set non-toolchain portion of runtime path of "/tmp/tmp32wku1zv/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib" +-- Installing: /tmp/tmprwg0zyqw/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so +-- Set non-toolchain portion of runtime path of "/tmp/tmprwg0zyqw/wheel/platlib/dolfinx/cpp.cpython-312-x86_64-linux-gnu.so" to "/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex/usr/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/openmpi:/usr/lib/x86_64-linux-gnu/openmpi/lib:/usr/lib/slepcdir/slepc3.21/x86_64-linux-gnu-complex/lib:/usr/lib/petscdir/petsc3.21/x86_64-linux-gnu-complex/lib" *** Making wheel... *** Created fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl Successfully built fenics_dolfinx-0.9.0-cp312-cp312-linux_x86_64.whl @@ -4444,27 +4480,27 @@ -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============================= slowest 20 durations ============================= -16.77s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] -9.47s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] -9.38s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] -5.32s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] -4.72s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] -4.40s call test/unit/fem/test_petsc_nonlinear_assembler.py::TestNLSPETSc::test_assembly_solve_taylor_hood_nl[mesh2] -4.23s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] -4.17s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] -4.16s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCE-CellType.hexahedron] -3.96s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] -3.90s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] -3.43s call test/unit/fem/test_dof_permuting.py::test_integral[2-hexahedron-AAE] -3.42s call test/unit/fem/test_fem_pipeline.py::test_NC_hex[3-NCF-CellType.hexahedron] -3.22s call test/unit/fem/test_fem_pipeline.py::test_dP_simplex[3-DG-CellType.tetrahedron] -3.21s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] -3.12s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] -3.12s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex128-CellType.hexahedron] -3.06s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] -2.93s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float32] -2.91s call test/unit/fem/test_fem_pipeline.py::test_biharmonic[HHJ-float64] -= 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 953.01s (0:15:53) = +65.11s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh1] +29.87s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_assembly_solve_taylor_hood[mesh2] +29.19s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name0] +28.76s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex64] +26.59s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-complex128] +22.22s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[1-DQ-CellType.hexahedron] +22.07s call test/unit/fem/test_fem_pipeline.py::test_dP_hex[2-DQ-CellType.hexahedron] +21.43s call test/unit/fem/test_assembler.py::TestPETScAssemblers::test_symmetry_interior_facet_assembly[mesh0] +20.83s call test/unit/fem/test_element_integrals.py::test_facet_normals[float64-CellType.hexahedron] +20.49s call test/unit/fem/test_assemble_submesh.py::test_mixed_dom_codim_0[dS-Discontinuous Lagrange-3-4] +19.49s call test/unit/fem/test_fem_pipeline.py::test_vector_P_tp[3-Q-CellType.hexahedron] +19.05s call test/unit/fem/test_element_integrals.py::test_facet_normals[complex64-CellType.hexahedron] +17.76s call test/debian-only/test_pusimp.py::test_dolfinx_import_errors_with_broken_non_optional_packages[dependencies_import_name1] +17.63s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float64] +16.67s call test/unit/fem/test_fem_pipeline.py::test_petsc_curl_curl_eigenvalue[1-N2curl] +16.58s call test/unit/fem/test_element_integrals.py::test_facet_normals[float32-CellType.hexahedron] +16.26s call test/unit/fem/test_fem_pipeline.py::test_DPC_hex[2-DPC-CellType.hexahedron] +15.04s call test/unit/la/test_nullspace.py::test_nullspace_check[2-3-float32] +14.37s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-BDM-CellType.tetrahedron] +14.02s call test/unit/fem/test_fem_pipeline.py::test_BDM_N2curl_simplex_highest_order[3-N2curl-CellType.tetrahedron] += 2517 passed, 96 skipped, 27 xfailed, 5 xpassed, 79 warnings in 4307.90s (1:11:47) = chrpath -d /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/python*/dist-packages/dolfinx/*.so sed -i "s/-D_FORTIFY_SOURCE=2//g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc sed -i "s|-DNDEBUG||g" /build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp*/usr/lib/x86_64-linux-gnu/pkgconfig/dolfinx*.pc @@ -4546,7 +4582,7 @@ -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (2.1s) +-- Configuring done (4.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -4611,11 +4647,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 0.67 sec +1/1 Test #1: unittests ........................ Passed 1.01 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 0.67 sec +Total Test time (real) = 1.02 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_test' running tests from demo for real build -- The C compiler identification is GNU 14.2.0 @@ -4671,8 +4707,8 @@ -- Looking for PETSC_USE_REAL_DOUBLE - found -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success --- Configuring done (2.2s) --- Generating done (0.0s) +-- Configuring done (4.5s) +-- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 @@ -4811,57 +4847,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo Start 1: demo_biharmonic_mpi_2 - 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.51 sec + 1/24 Test #1: demo_biharmonic_mpi_2 ........................ Passed 1.01 sec Start 2: demo_biharmonic_mpi_3 - 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.47 sec + 2/24 Test #2: demo_biharmonic_mpi_3 ........................ Passed 2.67 sec Start 3: demo_biharmonic_serial - 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.43 sec + 3/24 Test #3: demo_biharmonic_serial ....................... Passed 0.86 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.40 sec + 4/24 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.59 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec + 5/24 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.55 sec Start 6: demo_codim_0_assembly_serial - 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec + 6/24 Test #6: demo_codim_0_assembly_serial ................. Passed 0.39 sec Start 7: demo_custom_kernel_mpi_2 - 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.95 sec + 7/24 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 2.23 sec Start 8: demo_custom_kernel_mpi_3 - 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.85 sec + 8/24 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 1.37 sec Start 9: demo_custom_kernel_serial - 9/24 Test #9: demo_custom_kernel_serial .................... Passed 0.84 sec + 9/24 Test #9: demo_custom_kernel_serial .................... Passed 1.45 sec Start 10: demo_poisson_mpi_2 -10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 0.43 sec +10/24 Test #10: demo_poisson_mpi_2 ........................... Passed 1.52 sec Start 11: demo_poisson_mpi_3 -11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 0.47 sec +11/24 Test #11: demo_poisson_mpi_3 ........................... Passed 1.81 sec Start 12: demo_poisson_serial -12/24 Test #12: demo_poisson_serial .......................... Passed 0.33 sec +12/24 Test #12: demo_poisson_serial .......................... Passed 0.65 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.39 sec +13/24 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 1.92 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.60 sec +14/24 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 2.67 sec Start 15: demo_poisson_matrix_free_serial -15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec +15/24 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.77 sec Start 16: demo_hyperelasticity_mpi_2 -16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 1.63 sec +16/24 Test #16: demo_hyperelasticity_mpi_2 ................... Passed 11.90 sec Start 17: demo_hyperelasticity_mpi_3 -17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 1.67 sec +17/24 Test #17: demo_hyperelasticity_mpi_3 ................... Passed 16.89 sec Start 18: demo_hyperelasticity_serial -18/24 Test #18: demo_hyperelasticity_serial .................. Passed 1.00 sec +18/24 Test #18: demo_hyperelasticity_serial .................. Passed 5.56 sec Start 19: demo_interpolation-io_mpi_2 -19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 0.41 sec +19/24 Test #19: demo_interpolation-io_mpi_2 .................. Passed 3.95 sec Start 20: demo_interpolation-io_mpi_3 -20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 0.42 sec +20/24 Test #20: demo_interpolation-io_mpi_3 .................. Passed 4.08 sec Start 21: demo_interpolation-io_serial -21/24 Test #21: demo_interpolation-io_serial ................. Passed 0.33 sec +21/24 Test #21: demo_interpolation-io_serial ................. Passed 1.49 sec Start 22: demo_interpolation_different_meshes_mpi_2 -22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 2.83 sec +22/24 Test #22: demo_interpolation_different_meshes_mpi_2 .... Passed 15.85 sec Start 23: demo_interpolation_different_meshes_mpi_3 -23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 8.71 sec +23/24 Test #23: demo_interpolation_different_meshes_mpi_3 .... Passed 20.61 sec Start 24: demo_interpolation_different_meshes_serial -24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 0.80 sec +24/24 Test #24: demo_interpolation_different_meshes_serial ... Passed 3.37 sec 100% tests passed, 0 tests failed out of 24 -Total Test time (real) = 25.54 sec +Total Test time (real) = 104.21 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-real/run_demo' == testing complex number build == running tests from test for complex build @@ -4916,8 +4952,8 @@ -- Found ADIOS2: /usr/lib/x86_64-linux-gnu/cmake/adios2/mpi/adios2-config.cmake (found suitable version "2.10.1", minimum required is "2.8.1") found components: CXX -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success --- Configuring done (2.2s) --- Generating done (0.0s) +-- Configuring done (17.9s) +-- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -4981,11 +5017,11 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test Start 1: unittests -1/1 Test #1: unittests ........................ Passed 0.67 sec +1/1 Test #1: unittests ........................ Passed 3.00 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 0.67 sec +Total Test time (real) = 3.01 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_test' running tests from demo for complex build -- The C compiler identification is GNU 14.2.0 @@ -5042,8 +5078,8 @@ -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- ** This demo does not support complex mode --- Configuring done (2.3s) --- Generating done (0.0s) +-- Configuring done (15.1s) +-- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo --check-build-system CMakeFiles/Makefile.cmake 0 @@ -5165,57 +5201,57 @@ /usr/bin/ctest --force-new-ctest-process Test project /build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo Start 1: demo_biharmonic_mpi_2 - 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 0.54 sec + 1/21 Test #1: demo_biharmonic_mpi_2 ........................ Passed 3.48 sec Start 2: demo_biharmonic_mpi_3 - 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 0.55 sec + 2/21 Test #2: demo_biharmonic_mpi_3 ........................ Passed 3.73 sec Start 3: demo_biharmonic_serial - 3/21 Test #3: demo_biharmonic_serial ....................... Passed 0.52 sec + 3/21 Test #3: demo_biharmonic_serial ....................... Passed 3.02 sec Start 4: demo_codim_0_assembly_mpi_2 - 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 0.40 sec + 4/21 Test #4: demo_codim_0_assembly_mpi_2 .................. Passed 4.08 sec Start 5: demo_codim_0_assembly_mpi_3 - 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 0.41 sec + 5/21 Test #5: demo_codim_0_assembly_mpi_3 .................. Passed 2.46 sec Start 6: demo_codim_0_assembly_serial - 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.32 sec + 6/21 Test #6: demo_codim_0_assembly_serial ................. Passed 0.99 sec Start 7: demo_custom_kernel_mpi_2 - 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 0.99 sec + 7/21 Test #7: demo_custom_kernel_mpi_2 ..................... Passed 10.14 sec Start 8: demo_custom_kernel_mpi_3 - 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 0.86 sec + 8/21 Test #8: demo_custom_kernel_mpi_3 ..................... Passed 12.51 sec Start 9: demo_custom_kernel_serial - 9/21 Test #9: demo_custom_kernel_serial .................... Passed 0.85 sec + 9/21 Test #9: demo_custom_kernel_serial .................... Passed 7.58 sec Start 10: demo_poisson_mpi_2 -10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 0.45 sec +10/21 Test #10: demo_poisson_mpi_2 ........................... Passed 4.54 sec Start 11: demo_poisson_mpi_3 -11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 0.42 sec +11/21 Test #11: demo_poisson_mpi_3 ........................... Passed 3.32 sec Start 12: demo_poisson_serial -12/21 Test #12: demo_poisson_serial .......................... Passed 0.32 sec +12/21 Test #12: demo_poisson_serial .......................... Passed 1.01 sec Start 13: demo_poisson_matrix_free_mpi_2 -13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 0.41 sec +13/21 Test #13: demo_poisson_matrix_free_mpi_2 ............... Passed 2.25 sec Start 14: demo_poisson_matrix_free_mpi_3 -14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 0.40 sec +14/21 Test #14: demo_poisson_matrix_free_mpi_3 ............... Passed 2.85 sec Start 15: demo_poisson_matrix_free_serial -15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.31 sec +15/21 Test #15: demo_poisson_matrix_free_serial .............. Passed 0.95 sec Start 16: demo_interpolation-io_mpi_2 -16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 0.43 sec +16/21 Test #16: demo_interpolation-io_mpi_2 .................. Passed 4.77 sec Start 17: demo_interpolation-io_mpi_3 -17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 0.46 sec +17/21 Test #17: demo_interpolation-io_mpi_3 .................. Passed 3.95 sec Start 18: demo_interpolation-io_serial -18/21 Test #18: demo_interpolation-io_serial ................. Passed 0.33 sec +18/21 Test #18: demo_interpolation-io_serial ................. Passed 1.14 sec Start 19: demo_interpolation_different_meshes_mpi_2 -19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 2.88 sec +19/21 Test #19: demo_interpolation_different_meshes_mpi_2 .... Passed 13.91 sec Start 20: demo_interpolation_different_meshes_mpi_3 -20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 8.87 sec +20/21 Test #20: demo_interpolation_different_meshes_mpi_3 .... Passed 21.27 sec Start 21: demo_interpolation_different_meshes_serial -21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 0.80 sec +21/21 Test #21: demo_interpolation_different_meshes_serial ... Passed 5.42 sec 100% tests passed, 0 tests failed out of 21 -Total Test time (real) = 21.52 sec +Total Test time (real) = 113.43 sec make[2]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex/run_demo' make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_auto_install -i --builddir=/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --destdir=debian/tmp-complex - cd obj-x86_64-linux-gnu-complex && make -j42 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu-complex && make -j20 install DESTDIR=/build/reproducible-path/fenics-dolfinx-0.9.0/debian/tmp-complex AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex' /usr/bin/cmake -S/build/reproducible-path/fenics-dolfinx-0.9.0/cpp -B/build/reproducible-path/fenics-dolfinx-0.9.0/obj-x86_64-linux-gnu-complex --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -5354,24 +5390,24 @@ Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/nls +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson_matrix_free +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation-io -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/interpolation_different_meshes +Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/poisson Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/hyperelasticity -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/codim_0_assembly -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic -Searching for files in directory /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/custom_kernel Reading and parsing tag files Parsing files Reading /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/defines.cpp... @@ -5749,13 +5785,17 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/Function.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/FunctionSpace.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/interpolate.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/sparsitybuild.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/traits.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/BoundingBoxTree.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/dolfinx_geometry.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/gjk.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/AdjacencyList.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/dolfinx_graph.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/graph/ordering.h... @@ -5774,6 +5814,8 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/dolfinx_la.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/matrix_csr_impl.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/MatrixCSR.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/petsc.h... +Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/petsc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/slepc.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/SparsityPattern.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/Vector.h... @@ -5794,17 +5836,11 @@ Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/option.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/plaza.h... Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/refine.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/common/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/geometry/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/la/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... -Generating code for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/refinement/utils.h... Generating file documentation... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/DofMap.h... -Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/fem/utils.h... Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/mesh/utils.h... +Generating docs for file /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/dolfinx/io/ADIOS2Writers.h... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README... Generating docs for page todo... @@ -6042,7 +6078,6 @@ Generating XML output for namespace std Generating XML output for file biharmonic.py Generating XML output for file mixed_codim0.py -Generating XML output for file hyperelasticity.py Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp @@ -6051,6 +6086,7 @@ Generating XML output for file main.cpp Generating XML output for file main.cpp Generating XML output for file main.cpp +Generating XML output for file hyperelasticity.py Generating XML output for file poisson.py Generating XML output for file poisson.py Generating XML output for file README.md @@ -6103,16 +6139,18 @@ Generating XML output for file Function.h Generating XML output for file FunctionSpace.h Generating XML output for file interpolate.h -Generating XML output for file petsc.cpp -Generating XML output for file petsc.cpp -Generating XML output for file petsc.h -Generating XML output for file petsc.h Generating XML output for file sparsitybuild.cpp Generating XML output for file sparsitybuild.h Generating XML output for file traits.h Generating XML output for file BoundingBoxTree.h Generating XML output for file dolfinx_geometry.h Generating XML output for file gjk.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h +Generating XML output for file utils.h Generating XML output for file AdjacencyList.h Generating XML output for file dolfinx_graph.h Generating XML output for file ordering.cpp @@ -6143,6 +6181,10 @@ Generating XML output for file dolfinx_la.h Generating XML output for file matrix_csr_impl.h Generating XML output for file MatrixCSR.h +Generating XML output for file petsc.cpp +Generating XML output for file petsc.cpp +Generating XML output for file petsc.h +Generating XML output for file petsc.h Generating XML output for file slepc.cpp Generating XML output for file slepc.h Generating XML output for file SparsityPattern.cpp @@ -6163,6 +6205,9 @@ Generating XML output for file Topology.h Generating XML output for file topologycomputation.cpp Generating XML output for file topologycomputation.h +Generating XML output for file utils.cpp +Generating XML output for file utils.cpp +Generating XML output for file utils.cpp Generating XML output for file dolfinx_nls.h Generating XML output for file NewtonSolver.cpp Generating XML output for file NewtonSolver.h @@ -6172,15 +6217,6 @@ Generating XML output for file plaza.cpp Generating XML output for file plaza.h Generating XML output for file refine.h -Generating XML output for file utils.cpp -Generating XML output for file utils.cpp -Generating XML output for file utils.cpp -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h -Generating XML output for file utils.h Generating XML output for page md__2build_2reproducible-path_2fenics-dolfinx-0_89_80_2cpp_2demo_2README Generating XML output for page todo Generate XML output for dir /build/reproducible-path/fenics-dolfinx-0.9.0/cpp/demo/biharmonic/ @@ -6205,7 +6241,7 @@ Generating XML output for the main page Running plantuml with JAVA... Running dot... -Generating dot graphs using 43 parallel threads... +Generating dot graphs using 21 parallel threads... Running dot for graph 1/67 Running dot for graph 2/67 Running dot for graph 3/67 @@ -6311,23 +6347,23 @@ RDMAV_FORK_SAFE=1 \ python3 -m sphinx -W -b html source/ .pybuild/html/) Running Sphinx v7.4.7 -Matplotlib created a temporary cache directory at /tmp/matplotlib-smab86t2 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary cache directory at /tmp/matplotlib-2f2h5h_c because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. TNT degree 2 error: 0.0029421918345155706 -TNT degree 2 error: 0.00017118942553986645 -TNT degree 3 error: 8.385106828741018e-06 -TNT degree 4 error: 3.3949902024131903e-07 -TNT degree 5 error: 1.2528243192173552e-08 -TNT degree 6 error: 4.2427763620456416e-10 -TNT degree 7 error: 1.9821407338629663e-10 -TNT degree 8 error: 2.9565584931620583e-10 +TNT degree 2 error: 0.00017118942553986293 +TNT degree 3 error: 8.3851068287429e-06 +TNT degree 4 error: 3.3949902023163173e-07 +TNT degree 5 error: 1.2528243219944414e-08 +TNT degree 6 error: 4.2426963107010777e-10 +TNT degree 7 error: 1.9821138957997492e-10 +TNT degree 8 error: 2.9565584931541024e-10 Q degree 1 error: 0.04076382001057708 -Q degree 2 error: 0.002918221339526902 -Q degree 3 error: 0.00015944660110819777 -Q degree 4 error: 7.937421445106529e-06 -Q degree 5 error: 3.1034668624612296e-07 -Q degree 6 error: 1.1356498984352308e-08 -Q degree 7 error: 3.416145918786947e-10 -Q degree 8 error: 6.190884454572778e-11 +Q degree 2 error: 0.002918221339526905 +Q degree 3 error: 0.00015944660110819847 +Q degree 4 error: 7.93742144510796e-06 +Q degree 5 error: 3.103466862446263e-07 +Q degree 6 error: 1.1356498987237013e-08 +Q degree 7 error: 3.4161428239866125e-10 +Q degree 8 error: 6.19100847885188e-11 Computed L2 interpolation error (equispaced): 0.01588506513458592 Computed L2 interpolation error (gll_warped): 0.0015137108623519335 loading translations [en]... done @@ -6600,29 +6636,29 @@ echo "python-petsc4py-alt:Depends=python3-petsc4py, python3-slepc4py, python3-petsc4py-real (>= 3.21), python3-petsc4py-real (<< 3.22), python3-slepc4py-real (>= 3.21), python3-slepc4py-real (<< 3.22)" >> debian/libdolfinx-dev.substvars dh_gencontrol -- -Vpetsc:Depends="libpetsc-real3.21-dev, libslepc-real3.21-dev" -Vpetsc-complex:Depends="libpetsc-complex3.21-dev, libslepc-complex3.21-dev" -Vdolfinx:Next-Upstream-Version=1:0.10~ \ -Vnanobind:Upstream-Version=2.2 -Vnanobind:Next-Upstream-Version=3 -dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined -dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package dolfinx-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python-petsc4py-alt:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-dev: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-complex-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libdolfinx-complex0.9: substitution variable ${python3:Depends} unused, but is defined +dpkg-gencontrol: warning: package libdolfinx-real0.9: substitution variable ${python3:Depends} unused, but is defined make[1]: Leaving directory '/build/reproducible-path/fenics-dolfinx-0.9.0' dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake -dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-2_amd64.deb'. +dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-2_amd64.deb'. +dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real-dev' in '../libdolfinx-real-dev_0.9.0-2_amd64.deb'. -dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-2_amd64.deb'. +dpkg-deb: building package 'libdolfinx-dev' in '../libdolfinx-dev_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-real0.9' in '../libdolfinx-real0.9_0.9.0-2_amd64.deb'. -dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb'. +dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9' in '../libdolfinx-complex0.9_0.9.0-2_amd64.deb'. dpkg-deb: building package 'libdolfinx-complex0.9-dbgsym' in '../libdolfinx-complex0.9-dbgsym_0.9.0-2_amd64.deb'. -dpkg-deb: building package 'python3-dolfinx' in '../python3-dolfinx_0.9.0-2_amd64.deb'. -dpkg-deb: building package 'python3-dolfinx-real' in '../python3-dolfinx-real_0.9.0-2_amd64.deb'. -dpkg-deb: building package 'python3-dolfinx-complex' in '../python3-dolfinx-complex_0.9.0-2_amd64.deb'. +dpkg-deb: building package 'libdolfinx-complex-dev' in '../libdolfinx-complex-dev_0.9.0-2_amd64.deb'. +dpkg-deb: building package 'libdolfinx-real0.9-dbgsym' in '../libdolfinx-real0.9-dbgsym_0.9.0-2_amd64.deb'. dpkg-deb: building package 'dolfinx-doc' in '../dolfinx-doc_0.9.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../fenics-dolfinx_0.9.0-2_amd64.changes @@ -6631,12 +6667,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3252912/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/500505 and its subdirectories -I: Current time: Sun Dec 14 23:03:22 -12 2025 -I: pbuilder-time-stamp: 1765796602 +I: removing directory /srv/workspace/pbuilder/3252912 and its subdirectories +I: Current time: Wed Nov 13 00:25:35 +14 2024 +I: pbuilder-time-stamp: 1731407135 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/fenics-dolfinx_0.9.0-2.diff: 92.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/fenics-dolfinx_0.9.0-2.diff.gz b2/build.log: 89.5% -- replaced with stdout Compressing the 1st log... b1/build.log: 89.6% -- replaced with stdout Tue Nov 12 10:25:38 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_fenics-dolfinx_unstable_amd64_1731407138 + touch /var/log/reproducible-builds/diffoscope_stamp_fenics-dolfinx_unstable_amd64_1731407138 + RESULT=0 + systemd-run '--description=diffoscope on fenics-dolfinx/1:0.9.0-2 in unstable/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_10-22724 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl --run-session -c jenkins-reproducible-unstable-diffoscope-316d681b-1c19-4d68-946f-2eb66e21d9e2 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/dbd-tmp-cvu1ENf ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/fenics-dolfinx_0.9.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/fenics-dolfinx_0.9.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/fenics-dolfinx_0.9.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1/fenics-dolfinx_0.9.0-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2/fenics-dolfinx_0.9.0-2_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_10-22724.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/fenics-dolfinx_0.9.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/fenics-dolfinx_0.9.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/fenics-dolfinx_0.9.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b1/fenics-dolfinx_0.9.0-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.IlfzBQMl/b2/fenics-dolfinx_0.9.0-2_amd64.changes ## close_archive (total time: 0.000s) 0.000s 4 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer ## command (total time: 1.913s) 0.586s 1 call convert 0.406s 8 calls diff 0.379s 1 call compare 0.222s 6 calls xz 0.111s 10 calls sng 0.068s 9 calls cmp 0.068s 9 calls cmp (external) 0.059s 2 calls identify 0.008s 4 calls gzip 0.004s 44 calls cmp (internal) ## compare_files (cumulative) (total time: 17.030s) 3.877s 1 call abc.DotChangesFile 3.689s 1 call abc.DebFile 3.650s 2 calls abc.XzFile 3.339s 1 call abc.DebDataTarFile 1.463s 1 call abc.PngFile 0.465s 2 calls abc.GzipFile 0.449s 2 calls abc.JSONFile 0.064s 1 call abc.TarFile 0.035s 1 call abc.Md5sumsFile ## container_extract (total time: 0.669s) 0.424s 1768 calls diffoscope.comparators.deb.DebTarContainer 0.223s 6 calls diffoscope.comparators.xz.XzContainer 0.010s 8 calls diffoscope.comparators.deb.DebContainer 0.009s 4 calls diffoscope.comparators.gzip.GzipContainer 0.004s 6 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.017s) 0.017s 31 calls linediff ## has_same_content_as (total time: 0.077s) 0.055s 11 calls abc.DebFile 0.015s 1 call abc.DebDataTarFile 0.003s 23 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.002s 1 call abc.TarFile 0.000s 2 calls abc.TextFile 0.000s 2 calls abc.Md5sumsFile 0.000s 2 calls abc.XzFile 0.000s 2 calls abc.JSONFile 0.000s 2 calls abc.GzipFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call abc.PngFile ## main (total time: 5.820s) 5.734s 2 calls outputs 0.086s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 4 calls diffoscope.comparators.gzip.GzipContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 1.165s) 1.158s 1 call html 0.003s 1 call text 0.003s 1 call json ## recognizes (total time: 0.531s) 0.329s 12 calls diffoscope.comparators.binary.FilesystemFile 0.109s 594 calls diffoscope.comparators.debian.DebControlMember 0.058s 776 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.035s 332 calls diffoscope.comparators.utils.archive.ArchiveMember ## specialize (total time: 0.188s) 0.188s 48 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 6.165s CPU time consumed: 6.496s Tue Nov 12 10:25:45 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Tue Nov 12 10:25:45 UTC 2024 E: fenics-dolfinx failed to build reproducibly in unstable on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-12 10:25:45] INFO: Starting at 2024-11-12 10:25:45.933423 [2024-11-12 10:25:46] INFO: Generating the pages of 1 package(s) [2024-11-12 10:25:46] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/fenics-dolfinx didn't produce a buildlog, even though it has been built. [2024-11-12 10:25:46] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/fenics-dolfinx_0.9.0-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/fenics-dolfinx_0.9.0-2.diff.gz is missing [2024-11-12 10:25:46] INFO: Finished at 2024-11-12 10:25:46.447341, took: 0:00:00.513926 Tue Nov 12 10:25:46 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/fenics-dolfinx.html Tue Nov 12 10:25:46 UTC 2024 I: Submitting .buildinfo files to external archives: Tue Nov 12 10:25:46 UTC 2024 I: Submitting 28K b1/fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc https://buildinfo.debian.net/cee4bebc8e926a95b874d5a620c89bb282835714/fenics-dolfinx_1:0.9.0-2_all Tue Nov 12 10:25:47 UTC 2024 I: Submitting 28K b2/fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc https://buildinfo.debian.net/2c8e7e96b523147ca95f92d4e3ed309be7380585/fenics-dolfinx_1:0.9.0-2_all Tue Nov 12 10:25:48 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Nov 12 10:25:48 UTC 2024 I: Done submitting .buildinfo files. Tue Nov 12 10:25:48 UTC 2024 I: Removing signed fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc files: removed './b1/fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc' removed './b2/fenics-dolfinx_0.9.0-2_amd64.buildinfo.asc' 1731407148 amd64 unstable fenics-dolfinx Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/fenics-dolfinx_0.9.0-2.rbuild.log: 89.1% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/fenics-dolfinx_0.9.0-2.rbuild.log.gz [2024-11-12 10:25:48] INFO: Starting at 2024-11-12 10:25:48.562079 [2024-11-12 10:25:48] INFO: Generating the pages of 1 package(s) [2024-11-12 10:25:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/fenics-dolfinx_0.9.0-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/fenics-dolfinx_0.9.0-2.diff.gz is missing [2024-11-12 10:25:48] INFO: Finished at 2024-11-12 10:25:48.970700, took: 0:00:00.408628 All cleanup done. Tue Nov 12 10:25:49 UTC 2024 - total duration: 7h 4m 30s. Tue Nov 12 10:25:49 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-bACupk1v, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 7h 4min 33.927s CPU time consumed: 11.529s