Running as unit: rb-build-amd64_10-23134.service ==================================================================================== Fri Nov 22 17:24:49 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_10) on jenkins, called using "ionos5-amd64 ionos1-amd64" as arguments. Fri Nov 22 17:24:49 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-ZvOtDUm7" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 17:24:49 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Fri Nov 22 17:24:49 UTC 2024 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-y07o8U' Fri Nov 22 17:24:50 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Nov 22 17:24:50 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-g4Z3dt' ok, let's check if covtobed is building anywhere yet… ok, covtobed is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of covtobed in trixie on amd64 on jenkins now. 1st build will be done on ionos5-amd64.debian.net. 2nd build will be done on ionos1-amd64.debian.net. ============================================================================= Fri Nov 22 17:25:12 UTC 2024 I: starting to build covtobed/trixie/amd64 on jenkins on '2024-11-22 17:24' Fri Nov 22 17:25:12 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/23134/console.log 1732296312 amd64 trixie covtobed Fri Nov 22 17:25:12 UTC 2024 I: Downloading source for trixie/covtobed=1.3.5+dfsg-2 --2024-11-22 17:25:12-- http://deb.debian.org/debian/pool/main/c/covtobed/covtobed_1.3.5%2bdfsg-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1475 (1.4K) [text/prs.lines.tag] Saving to: ‘covtobed_1.3.5+dfsg-2.dsc’ 0K . 100% 190M=0s 2024-11-22 17:25:12 (190 MB/s) - ‘covtobed_1.3.5+dfsg-2.dsc’ saved [1475/1475] --2024-11-22 17:25:12-- http://deb.debian.org/debian/pool/main/c/covtobed/covtobed_1.3.5%2bdfsg-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1475 (1.4K) [text/prs.lines.tag] Saving to: ‘covtobed_1.3.5+dfsg-2.dsc’ 0K . 100% 190M=0s 2024-11-22 17:25:12 (190 MB/s) - ‘covtobed_1.3.5+dfsg-2.dsc’ saved [1475/1475] Fri Nov 22 17:25:12 UTC 2024 I: covtobed_1.3.5+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: covtobed Binary: covtobed, covtobed-examples Architecture: any all Version: 1.3.5+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Shayan Doust Homepage: https://github.com/telatin/covtobed Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/covtobed Vcs-Git: https://salsa.debian.org/med-team/covtobed.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libbamtools-dev, zlib1g-dev Package-List: covtobed deb science optional arch=any covtobed-examples deb science optional arch=all Checksums-Sha1: 54c8ee5cf55135781150d16e5ec8188f92be7337 35281592 covtobed_1.3.5+dfsg.orig.tar.xz 3d0b42022a93d794409525272826f90dce924121 6348 covtobed_1.3.5+dfsg-2.debian.tar.xz Checksums-Sha256: df1af8451cd9e854d254c1bbb0fe6b15569f22721e39f05aa4fdf33045a722a3 35281592 covtobed_1.3.5+dfsg.orig.tar.xz 0b3a3e1409ec12fc2d0a7f5776e2f720e0b10d87f07811b8ddda8136e3cc2b8b 6348 covtobed_1.3.5+dfsg-2.debian.tar.xz Files: ab82374e23875306d9cde2eea0449cb9 35281592 covtobed_1.3.5+dfsg.orig.tar.xz b6be92456b1c49435e077b0e1d61c7c7 6348 covtobed_1.3.5+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCZPzBZQAKCRAqJ5BL1yQ+ 2nnmAQDJqfxK+/MHVLgNFemIBzcdS2THuvKFNBD6d9QStbPM1gD/WSi/GQqndWff G3IYooupPPKxs//rc9ZVcLE9QV48AQg= =dJQs -----END PGP SIGNATURE----- Fri Nov 22 17:25:12 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 17:25:12 UTC 2024 I: Starting 1st build on remote node ionos5-amd64.debian.net. Fri Nov 22 17:25:12 UTC 2024 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Fri Nov 22 17:25:12 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Fri Nov 22 17:25:12 UTC 2024 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-DUZIfg' ==================================================================================== Thu Dec 25 23:48:13 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos5-amd64, called using "1 covtobed trixie /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6 1.3.5+dfsg-2" as arguments. Thu Dec 25 23:48:13 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-Exy6eTNY" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Dec 25 23:48:13 UTC 2025 I: Downloading source for trixie/covtobed=1.3.5+dfsg-2 Reading package lists... NOTICE: 'covtobed' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/covtobed.git Please use: git clone https://salsa.debian.org/med-team/covtobed.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 35.3 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (dsc) [1475 B] Get:2 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (tar) [35.3 MB] Get:3 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (diff) [6348 B] Fetched 35.3 MB in 0s (111 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'covtobed' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/covtobed.git Please use: git clone https://salsa.debian.org/med-team/covtobed.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 35.3 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (dsc) [1475 B] Get:2 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (tar) [35.3 MB] Get:3 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (diff) [6348 B] Fetched 35.3 MB in 0s (111 MB/s) Download complete and in download only mode ============================================================================= Building covtobed in trixie on amd64 on ionos5-amd64 now. Date: Thu Dec 25 23:48:14 UTC 2025 Date UTC: Thu Dec 25 23:48:14 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 11:48:14 -12 2025 I: pbuilder-time-stamp: 1766706494 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [covtobed_1.3.5+dfsg-2.dsc] I: copying [./covtobed_1.3.5+dfsg.orig.tar.xz] I: copying [./covtobed_1.3.5+dfsg-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Sep 9 19:03:01 2023 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./covtobed_1.3.5+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting covtobed in covtobed-1.3.5+dfsg dpkg-source: info: unpacking covtobed_1.3.5+dfsg.orig.tar.xz dpkg-source: info: unpacking covtobed_1.3.5+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying test_use_system_installed_binary.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3586165/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3b0fd53893464885874e901e532dffb2' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3586165' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_40XP --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1 --logfile b1/build.log covtobed_1.3.5+dfsg-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3586165/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libbamtools-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbamtools-dev; however: Package libbamtools-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbamtools-dev{a} libbamtools2.5.2{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 21.1 MB of archives. After unpacking 78.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-6+b1 [161 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libbamtools-dev amd64 2.5.2+dfsg-6+b1 [222 kB] Fetched 21.1 MB in 7s (2840 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libbamtools2.5.2:amd64. Preparing to unpack .../29-libbamtools2.5.2_2.5.2+dfsg-6+b1_amd64.deb ... Unpacking libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../30-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libbamtools-dev:amd64. Preparing to unpack .../31-libbamtools-dev_2.5.2+dfsg-6+b1_amd64.deb ... Unpacking libbamtools-dev:amd64 (2.5.2+dfsg-6+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libbamtools-dev:amd64 (2.5.2+dfsg-6+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/covtobed-1.3.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../covtobed_1.3.5+dfsg-2_source.changes dpkg-buildpackage: info: source package covtobed dpkg-buildpackage: info: source version 1.3.5+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/covtobed-1.3.5+dfsg' mkdir build x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/covtobed-1.3.5+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++11 *.cpp -I/usr/include/bamtools/ -L/usr/lib/ -lbamtools -o build/covtobed -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/build/reproducible-path/covtobed-1.3.5+dfsg' create-stamp debian/debhelper-build-stamp dh_prep dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'covtobed' in '../covtobed_1.3.5+dfsg-2_amd64.deb'. dpkg-deb: building package 'covtobed-dbgsym' in '../covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb'. dpkg-deb: building package 'covtobed-examples' in '../covtobed-examples_1.3.5+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../covtobed_1.3.5+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../covtobed_1.3.5+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3586165 and its subdirectories I: Current time: Thu Dec 25 11:50:09 -12 2025 I: pbuilder-time-stamp: 1766706609 Thu Dec 25 23:50:09 UTC 2025 I: Signing ./b1/covtobed_1.3.5+dfsg-2_amd64.buildinfo as covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc Thu Dec 25 23:50:09 UTC 2025 I: Signed ./b1/covtobed_1.3.5+dfsg-2_amd64.buildinfo as ./b1/covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc Thu Dec 25 23:50:09 UTC 2025 - build #1 for covtobed/trixie/amd64 on ionos5-amd64 done. Starting cleanup. All cleanup done. Thu Dec 25 23:50:09 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Exy6eTNY, removing. /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 17:27 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 17:25 b2 -rw-r--r-- 1 jenkins jenkins 1475 Sep 9 2023 covtobed_1.3.5+dfsg-2.dsc -rw------- 1 jenkins jenkins 2605 Nov 22 17:25 rbuildlog.wWnwfFC /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1: total 34360 -rw-r--r-- 1 jenkins jenkins 19304 Nov 22 17:27 build.log -rw-r--r-- 1 jenkins jenkins 745140 Nov 22 17:27 covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 34326324 Nov 22 17:27 covtobed-examples_1.3.5+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 6348 Nov 22 17:27 covtobed_1.3.5+dfsg-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1475 Nov 22 17:27 covtobed_1.3.5+dfsg-2.dsc -rw-r--r-- 1 jenkins jenkins 5431 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6313 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1960 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 52600 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1422 Nov 22 17:27 covtobed_1.3.5+dfsg-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2: total 0 Fri Nov 22 17:27:10 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 11:48:14 -12 2025 I: pbuilder-time-stamp: 1766706494 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [covtobed_1.3.5+dfsg-2.dsc] I: copying [./covtobed_1.3.5+dfsg.orig.tar.xz] I: copying [./covtobed_1.3.5+dfsg-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Sep 9 19:03:01 2023 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./covtobed_1.3.5+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting covtobed in covtobed-1.3.5+dfsg dpkg-source: info: unpacking covtobed_1.3.5+dfsg.orig.tar.xz dpkg-source: info: unpacking covtobed_1.3.5+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying test_use_system_installed_binary.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3586165/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3b0fd53893464885874e901e532dffb2' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3586165' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_40XP --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1 --logfile b1/build.log covtobed_1.3.5+dfsg-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3586165/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libbamtools-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbamtools-dev; however: Package libbamtools-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbamtools-dev{a} libbamtools2.5.2{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 21.1 MB of archives. After unpacking 78.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-6+b1 [161 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libbamtools-dev amd64 2.5.2+dfsg-6+b1 [222 kB] Fetched 21.1 MB in 7s (2840 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libbamtools2.5.2:amd64. Preparing to unpack .../29-libbamtools2.5.2_2.5.2+dfsg-6+b1_amd64.deb ... Unpacking libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../30-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libbamtools-dev:amd64. Preparing to unpack .../31-libbamtools-dev_2.5.2+dfsg-6+b1_amd64.deb ... Unpacking libbamtools-dev:amd64 (2.5.2+dfsg-6+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libbamtools-dev:amd64 (2.5.2+dfsg-6+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/covtobed-1.3.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../covtobed_1.3.5+dfsg-2_source.changes dpkg-buildpackage: info: source package covtobed dpkg-buildpackage: info: source version 1.3.5+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/covtobed-1.3.5+dfsg' mkdir build x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/covtobed-1.3.5+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++11 *.cpp -I/usr/include/bamtools/ -L/usr/lib/ -lbamtools -o build/covtobed -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/build/reproducible-path/covtobed-1.3.5+dfsg' create-stamp debian/debhelper-build-stamp dh_prep dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'covtobed' in '../covtobed_1.3.5+dfsg-2_amd64.deb'. dpkg-deb: building package 'covtobed-dbgsym' in '../covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb'. dpkg-deb: building package 'covtobed-examples' in '../covtobed-examples_1.3.5+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../covtobed_1.3.5+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../covtobed_1.3.5+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3586165 and its subdirectories I: Current time: Thu Dec 25 11:50:09 -12 2025 I: pbuilder-time-stamp: 1766706609 Fri Nov 22 17:27:10 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Fri Nov 22 17:27:10 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Fri Nov 22 17:27:10 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Nov 22 17:27:10 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-GjJfiN' ==================================================================================== Fri Nov 22 17:27:11 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "2 covtobed trixie /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6 1.3.5+dfsg-2" as arguments. Fri Nov 22 17:27:11 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-ZSdmv5Ba" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 17:27:12 UTC 2024 I: Downloading source for trixie/covtobed=1.3.5+dfsg-2 Reading package lists... NOTICE: 'covtobed' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/covtobed.git Please use: git clone https://salsa.debian.org/med-team/covtobed.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 35.3 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (dsc) [1475 B] Get:2 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (tar) [35.3 MB] Get:3 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (diff) [6348 B] Fetched 35.3 MB in 2s (22.7 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'covtobed' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/covtobed.git Please use: git clone https://salsa.debian.org/med-team/covtobed.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 35.3 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (dsc) [1475 B] Get:2 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (tar) [35.3 MB] Get:3 http://deb.debian.org/debian trixie/main covtobed 1.3.5+dfsg-2 (diff) [6348 B] Fetched 35.3 MB in 2s (22.7 MB/s) Download complete and in download only mode ============================================================================= Re-Building covtobed in trixie on amd64 on ionos1-amd64 now. Date: Fri Nov 22 17:27:14 UTC 2024 Date UTC: Fri Nov 22 17:27:14 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6 + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_8l5t + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' covtobed = debian-installer -o covtobed = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' covtobed = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_8l5t --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2 --logfile b2/build.log covtobed_1.3.5+dfsg-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 07:27:14 +14 2024 I: pbuilder-time-stamp: 1732296434 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [covtobed_1.3.5+dfsg-2.dsc] I: copying [./covtobed_1.3.5+dfsg.orig.tar.xz] I: copying [./covtobed_1.3.5+dfsg-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Sep 9 19:03:01 2023 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./covtobed_1.3.5+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting covtobed in covtobed-1.3.5+dfsg dpkg-source: info: unpacking covtobed_1.3.5+dfsg.orig.tar.xz dpkg-source: info: unpacking covtobed_1.3.5+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying test_use_system_installed_binary.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D01_modify_environment starting debug: Running on ionos1-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 22 17:27 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=c0cf83eee85445689cef7cb2c75ad9cf LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3064950 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_8l5t --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2 --logfile b2/build.log covtobed_1.3.5+dfsg-2.dsc' SUDO_GID=110 SUDO_UID=105 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libbamtools-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbamtools-dev; however: Package libbamtools-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbamtools-dev{a} libbamtools2.5.2{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 21.1 MB of archives. After unpacking 78.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-6+b1 [161 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libbamtools-dev amd64 2.5.2+dfsg-6+b1 [222 kB] Fetched 21.1 MB in 2s (12.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libbamtools2.5.2:amd64. Preparing to unpack .../29-libbamtools2.5.2_2.5.2+dfsg-6+b1_amd64.deb ... Unpacking libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../30-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libbamtools-dev:amd64. Preparing to unpack .../31-libbamtools-dev_2.5.2+dfsg-6+b1_amd64.deb ... Unpacking libbamtools-dev:amd64 (2.5.2+dfsg-6+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libbamtools2.5.2:amd64 (2.5.2+dfsg-6+b1) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libbamtools-dev:amd64 (2.5.2+dfsg-6+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/covtobed-1.3.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../covtobed_1.3.5+dfsg-2_source.changes dpkg-buildpackage: info: source package covtobed dpkg-buildpackage: info: source version 1.3.5+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/covtobed-1.3.5+dfsg' mkdir build x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/covtobed-1.3.5+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -std=c++11 *.cpp -I/usr/include/bamtools/ -L/usr/lib/ -lbamtools -o build/covtobed -Wl,-z,relro -Wl,-z,now make[1]: Leaving directory '/build/reproducible-path/covtobed-1.3.5+dfsg' create-stamp debian/debhelper-build-stamp dh_prep dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'covtobed' in '../covtobed_1.3.5+dfsg-2_amd64.deb'. dpkg-deb: building package 'covtobed-dbgsym' in '../covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb'. dpkg-deb: building package 'covtobed-examples' in '../covtobed-examples_1.3.5+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../covtobed_1.3.5+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../covtobed_1.3.5+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3064950 and its subdirectories I: Current time: Sat Nov 23 07:30:20 +14 2024 I: pbuilder-time-stamp: 1732296620 + false + set +x Fri Nov 22 17:30:20 UTC 2024 I: Signing ./b2/covtobed_1.3.5+dfsg-2_amd64.buildinfo as covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc Fri Nov 22 17:30:20 UTC 2024 I: Signed ./b2/covtobed_1.3.5+dfsg-2_amd64.buildinfo as ./b2/covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc Fri Nov 22 17:30:20 UTC 2024 - build #2 for covtobed/trixie/amd64 on ionos1-amd64 done. Starting cleanup. All cleanup done. Fri Nov 22 17:30:20 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-ZSdmv5Ba, removing. /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6: total 36 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 17:27 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 17:30 b2 -rw-r--r-- 1 jenkins jenkins 1475 Sep 9 2023 covtobed_1.3.5+dfsg-2.dsc -rw------- 1 jenkins jenkins 22195 Nov 22 17:27 rbuildlog.wWnwfFC /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1: total 34408 -rw-r--r-- 1 jenkins jenkins 19304 Nov 22 17:27 build.log -rw-r--r-- 1 jenkins jenkins 745140 Nov 22 17:27 covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 34326324 Nov 22 17:27 covtobed-examples_1.3.5+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 6348 Nov 22 17:27 covtobed_1.3.5+dfsg-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1475 Nov 22 17:27 covtobed_1.3.5+dfsg-2.dsc -rw-r--r-- 1 jenkins jenkins 5431 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6313 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1960 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 52600 Nov 22 17:27 covtobed_1.3.5+dfsg-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1422 Nov 22 17:27 covtobed_1.3.5+dfsg-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2: total 34364 -rw-r--r-- 1 jenkins jenkins 21223 Nov 22 17:30 build.log -rw-r--r-- 1 jenkins jenkins 745140 Nov 22 17:30 covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 34326324 Nov 22 17:30 covtobed-examples_1.3.5+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 6348 Nov 22 17:30 covtobed_1.3.5+dfsg-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1475 Nov 22 17:30 covtobed_1.3.5+dfsg-2.dsc -rw-r--r-- 1 jenkins jenkins 5422 Nov 22 17:30 covtobed_1.3.5+dfsg-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6304 Nov 22 17:30 covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1960 Nov 22 17:30 covtobed_1.3.5+dfsg-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 52600 Nov 22 17:30 covtobed_1.3.5+dfsg-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1422 Nov 22 17:30 covtobed_1.3.5+dfsg-2_source.changes Fri Nov 22 17:30:21 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Fri Nov 22 17:30:21 UTC 2024 I: covtobed_1.3.5+dfsg-2_amd64.changes: Format: 1.8 Date: Sun, 10 Sep 2023 00:28:25 +0530 Source: covtobed Binary: covtobed covtobed-dbgsym covtobed-examples Architecture: amd64 all Version: 1.3.5+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: covtobed - convert the coverage track from a BAM file into a BED file covtobed-examples - example data and scripts for mindthegap Closes: 1044576 1049525 Changes: covtobed (1.3.5+dfsg-2) unstable; urgency=medium . * Team Upload. * [skip ci] Remove myself from uploaders * Cleanup build/ directory in d/clean (Closes: #1044576, #1049525) * Bump Standards-Version to 4.6.2 (no changes needed) Checksums-Sha1: b6d816f29875be80453afaa32fd8ba5a778abe11 745140 covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb 2a997db56d84ac3628fd25a1b8558540e265a2ca 34326324 covtobed-examples_1.3.5+dfsg-2_all.deb f50ac8f23280304985e6f2f464f49c68a5988a9a 5431 covtobed_1.3.5+dfsg-2_amd64.buildinfo 346a6da9638da767fb7694ae0100863a7b1ff99f 52600 covtobed_1.3.5+dfsg-2_amd64.deb Checksums-Sha256: def012c51ceb6908b1f9a617903ab510ee15c95f7beea8d7919b9f056caf6927 745140 covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb 04b29b777bc3741f83944b383d03d02e0a07b4d7dc49daaa33515615f1866462 34326324 covtobed-examples_1.3.5+dfsg-2_all.deb e73ff29d307f105091cf9028386e6829ffbfb0e679c74a1a9719f3c51bdfb8e6 5431 covtobed_1.3.5+dfsg-2_amd64.buildinfo 3037cb568d53457a5b876d04ced1de052359bca43c2c13e586f704b66bd3467a 52600 covtobed_1.3.5+dfsg-2_amd64.deb Files: a8f3c2c66401354d8257883c51689d6b 745140 debug optional covtobed-dbgsym_1.3.5+dfsg-2_amd64.deb 916e2391d631fcea52d18172e8df6914 34326324 science optional covtobed-examples_1.3.5+dfsg-2_all.deb e68278c9a5bce203e010660d3974019d 5431 science optional covtobed_1.3.5+dfsg-2_amd64.buildinfo 8d7ab9339a9eb24a031d46da8a043a8e 52600 science optional covtobed_1.3.5+dfsg-2_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/covtobed_1.3.5+dfsg-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/covtobed_1.3.5+dfsg-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/covtobed_1.3.5+dfsg-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/covtobed_1.3.5+dfsg-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/amd64/covtobed_1.3.5+dfsg-2_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/covtobed_1.3.5+dfsg-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-22 17:27:09.820001928 +0000 +++ b2/build.log 2024-11-22 17:30:20.747353273 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 25 11:48:14 -12 2025 -I: pbuilder-time-stamp: 1766706494 +I: Current time: Sat Nov 23 07:27:14 +14 2024 +I: pbuilder-time-stamp: 1732296434 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying test_use_system_installed_binary.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3586165/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 22 17:27 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='3b0fd53893464885874e901e532dffb2' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3586165' - PS1='# ' - PS2='> ' + INVOCATION_ID=c0cf83eee85445689cef7cb2c75ad9cf + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3064950 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_40XP --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1 --logfile b1/build.log covtobed_1.3.5+dfsg-2.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/pbuilderrc_8l5t --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2 --logfile b2/build.log covtobed_1.3.5+dfsg-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3586165/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -144,7 +176,7 @@ Get: 30 http://deb.debian.org/debian trixie/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-6+b1 [161 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libbamtools-dev amd64 2.5.2+dfsg-6+b1 [222 kB] -Fetched 21.1 MB in 7s (2840 kB/s) +Fetched 21.1 MB in 2s (12.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) @@ -287,7 +319,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/covtobed-1.3.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../covtobed_1.3.5+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/covtobed-1.3.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../covtobed_1.3.5+dfsg-2_source.changes dpkg-buildpackage: info: source package covtobed dpkg-buildpackage: info: source version 1.3.5+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -336,12 +372,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3064950/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3586165 and its subdirectories -I: Current time: Thu Dec 25 11:50:09 -12 2025 -I: pbuilder-time-stamp: 1766706609 +I: removing directory /srv/workspace/pbuilder/3064950 and its subdirectories +I: Current time: Sat Nov 23 07:30:20 +14 2024 +I: pbuilder-time-stamp: 1732296620 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/covtobed_1.3.5+dfsg-2.diff: 66.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/covtobed_1.3.5+dfsg-2.diff.gz b2/build.log: 73.8% -- replaced with stdout Compressing the 1st log... b1/build.log: 74.6% -- replaced with stdout Fri Nov 22 17:30:22 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_covtobed_trixie_amd64_1732296622 + touch /var/log/reproducible-builds/diffoscope_stamp_covtobed_trixie_amd64_1732296622 + RESULT=0 + systemd-run '--description=diffoscope on covtobed/1.3.5+dfsg-2 in trixie/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_10-23134 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6 --run-session -c jenkins-reproducible-trixie-diffoscope-8b0fc3f0-00aa-4f1e-8f0f-b900b6ee433f -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/dbd-tmp-H0b8Osf ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/covtobed_1.3.5+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/covtobed_1.3.5+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/covtobed_1.3.5+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1/covtobed_1.3.5+dfsg-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2/covtobed_1.3.5+dfsg-2_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_10-23134.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/covtobed_1.3.5+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/covtobed_1.3.5+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/covtobed_1.3.5+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b1/covtobed_1.3.5+dfsg-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.VqN6gYS6/b2/covtobed_1.3.5+dfsg-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.674s) 0.674s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.320s) 0.320s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1.010s CPU time consumed: 980ms _ _ _ ___ _____ _| |_ ___ | |__ ___ __| | / __/ _ \ \ / / __/ _ \| '_ \ / _ \/ _` | | (_| (_) \ V /| || (_) | |_) | __/ (_| | \___\___/ \_/ \__\___/|_.__/ \___|\__,_| Fri Nov 22 17:30:24 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Fri Nov 22 17:30:24 UTC 2024 I: covtobed from trixie built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-22 17:30:24] INFO: Starting at 2024-11-22 17:30:24.768337 [2024-11-22 17:30:24] INFO: Generating the pages of 1 package(s) [2024-11-22 17:30:24] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/amd64/covtobed didn't produce a buildlog, even though it has been built. [2024-11-22 17:30:25] INFO: Finished at 2024-11-22 17:30:25.106711, took: 0:00:00.338380 Fri Nov 22 17:30:25 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/amd64/covtobed.html Fri Nov 22 17:30:25 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Nov 22 17:30:25 UTC 2024 I: Submitting 8.0K b1/covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc https://buildinfo.debian.net/f50ac8f23280304985e6f2f464f49c68a5988a9a/covtobed_1.3.5+dfsg-2_all Fri Nov 22 17:30:27 UTC 2024 I: Submitting 8.0K b2/covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc https://buildinfo.debian.net/5bbb0cfc0c69ceea7b3868c0a03547afcb733e1f/covtobed_1.3.5+dfsg-2_all Fri Nov 22 17:30:29 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Nov 22 17:30:29 UTC 2024 I: Done submitting .buildinfo files. Fri Nov 22 17:30:29 UTC 2024 I: Removing signed covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc files: removed './b1/covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc' removed './b2/covtobed_1.3.5+dfsg-2_amd64.buildinfo.asc' 1732296629 amd64 trixie covtobed Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/covtobed_1.3.5+dfsg-2.rbuild.log: 72.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/covtobed_1.3.5+dfsg-2.rbuild.log.gz [2024-11-22 17:30:29] INFO: Starting at 2024-11-22 17:30:29.447926 [2024-11-22 17:30:29] INFO: Generating the pages of 1 package(s) [2024-11-22 17:30:29] INFO: Finished at 2024-11-22 17:30:29.862363, took: 0:00:00.414445 All cleanup done. Fri Nov 22 17:30:29 UTC 2024 - total duration: 0h 5m 35s. Fri Nov 22 17:30:29 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-ZvOtDUm7, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 5min 40.469s CPU time consumed: 7.870s