Running as unit: rb-build-amd64_10-27389.service ==================================================================================== Wed Jan 8 00:50:45 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_10) on jenkins, called using "ionos5-amd64 ionos1-amd64" as arguments. Wed Jan 8 00:50:45 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-f4V3I0nB" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Jan 8 00:50:45 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Wed Jan 8 00:50:45 UTC 2025 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-IoelWC' Wed Jan 8 00:50:45 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Wed Jan 8 00:50:45 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-4KBQvU' ok, let's check if r-bioc-edaseq is building anywhere yet… ok, r-bioc-edaseq is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of r-bioc-edaseq in unstable on amd64 on jenkins now. 1st build will be done on ionos5-amd64.debian.net. 2nd build will be done on ionos1-amd64.debian.net. ============================================================================= Wed Jan 8 00:51:00 UTC 2025 I: starting to build r-bioc-edaseq/unstable/amd64 on jenkins on '2025-01-08 00:50' Wed Jan 8 00:51:00 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/27389/console.log 1736297460 amd64 unstable r-bioc-edaseq Wed Jan 8 00:51:00 UTC 2025 I: Downloading source for unstable/r-bioc-edaseq=2.38.0+dfsg-1 --2025-01-08 00:51:01-- http://deb.debian.org/debian/pool/main/r/r-bioc-edaseq/r-bioc-edaseq_2.38.0%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2422 (2.4K) [text/prs.lines.tag] Saving to: ‘r-bioc-edaseq_2.38.0+dfsg-1.dsc’ 0K .. 100% 307M=0s 2025-01-08 00:51:01 (307 MB/s) - ‘r-bioc-edaseq_2.38.0+dfsg-1.dsc’ saved [2422/2422] --2025-01-08 00:51:01-- http://deb.debian.org/debian/pool/main/r/r-bioc-edaseq/r-bioc-edaseq_2.38.0%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2422 (2.4K) [text/prs.lines.tag] Saving to: ‘r-bioc-edaseq_2.38.0+dfsg-1.dsc’ 0K .. 100% 307M=0s 2025-01-08 00:51:01 (307 MB/s) - ‘r-bioc-edaseq_2.38.0+dfsg-1.dsc’ saved [2422/2422] Wed Jan 8 00:51:01 UTC 2025 I: r-bioc-edaseq_2.38.0+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: r-bioc-edaseq Binary: r-bioc-edaseq Architecture: all Version: 2.38.0+dfsg-1 Maintainer: Debian R Packages Maintainers Uploaders: Andreas Tille Homepage: https://bioconductor.org/packages/EDASeq/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-edaseq Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-edaseq.git Testsuite: autopkgtest-pkg-r Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase (>= 2.64.0), r-bioc-shortread (>= 1.62.0), r-bioc-biocgenerics (>= 0.50.0), r-bioc-iranges (>= 2.38.1), r-bioc-aroma.light (>= 3.34.0), r-bioc-rsamtools (>= 2.20.0), r-bioc-biomart (>= 2.60.1), r-bioc-biostrings (>= 2.72.1), r-bioc-annotationdbi (>= 1.66.0), r-bioc-genomicfeatures (>= 1.56.0), r-bioc-genomicranges (>= 1.56.1), r-cran-biocmanager Package-List: r-bioc-edaseq deb gnu-r optional arch=all Checksums-Sha1: 1424db272e44f9633e1a1a0c7107fea856e45844 118584 r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz fb1dbd7001409a02f4805fb5806b5a4a940c9e82 5892 r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz Checksums-Sha256: 49fb9e4b05c9e97578e19e2dc13b4edd1c36606d30d3133c189cdc9952935653 118584 r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz 0a7416a74ca09b2cb487a18cf51a6de164d2037f965a6a9e1164b140a36eb71d 5892 r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz Files: 8106ce948ea6b01ce9ce7a2950736efc 118584 r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz f4535282e6253cd84121c7afdcf681ac 5892 r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmbB8Y4ACgkQPCZ2P2xn 5uK79A//anX5BWSLn4Z3QLvjcYpURlQM8VKBLFnrMqdACvdj2jx5znDksGstx4yK Foy5A79oUU40AQNUYypw4NG/aLgPHdGR61te/7Z+9Vs88vRFuCQvnetOvN4cMW37 AWI+DD6p3ZjT3NPvKltu6dQwoKU701PLROgqD1oUq+Dl8JMAQKszsuJBlXyCRS0w /Gfzw8lP/d/uCv1QKdMWw58+O1OKA4OONkwNB4RSfPCF7FTLyWx2JAaOHP+KiYpy gnllnWV+KbRie2g8TVew2SMY21s71IxAPB814kk2wVFCMx20A/4osk3p85Chhc5s YFY4SO9t8Zcz4lvUBuOOHQnPWZYQBIXt/rJvvbWg3KmF1JTOujMcO9ckh8XSGVtd 1ZS1U5OcQyPNLepDb65/spGEptPRFlbhVqgKuuPO0y1LSNx3AXg1dOb007pUaAFx EaZK17bZ+GTfBQuMQvljgedf9NyDUJFJIAg5e7m4hUKuwozAMblAfPRv0BEof/s3 TZN8U96rch42wsgRRydtiuaIsbWj+AlgOxe/UUYX9Tu3Fa1Mt7p5EHp/fuHUhvB2 yxJwpYQPm9dhFt7EPP2A+ZvlXOUSZlt/PhaSxBW7a/w2MA9V1tn0dexWiXtP0A6E JHoOreTDscv+3BwzgLUktwRsjCWtl2nIflRS4115920zj+HHpnc= =+VoV -----END PGP SIGNATURE----- Wed Jan 8 00:51:01 UTC 2025 I: Checking whether the package is not for us Wed Jan 8 00:51:01 UTC 2025 I: Starting 1st build on remote node ionos5-amd64.debian.net. Wed Jan 8 00:51:01 UTC 2025 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Wed Jan 8 00:51:01 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Wed Jan 8 00:51:01 UTC 2025 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-G8I135' ==================================================================================== Tue Feb 10 07:14:02 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos5-amd64, called using "1 r-bioc-edaseq unstable /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej 2.38.0+dfsg-1" as arguments. Tue Feb 10 07:14:02 UTC 2026 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-fHlLjnAF" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Feb 10 07:14:02 UTC 2026 I: Downloading source for unstable/r-bioc-edaseq=2.38.0+dfsg-1 Reading package lists... NOTICE: 'r-bioc-edaseq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/r-pkg-team/r-bioc-edaseq.git Please use: git clone https://salsa.debian.org/r-pkg-team/r-bioc-edaseq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 127 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main r-bioc-edaseq 2.38.0+dfsg-1 (dsc) [2422 B] Get:2 http://deb.debian.org/debian unstable/main r-bioc-edaseq 2.38.0+dfsg-1 (tar) [119 kB] Get:3 http://deb.debian.org/debian unstable/main r-bioc-edaseq 2.38.0+dfsg-1 (diff) [5892 B] Fetched 127 kB in 0s (1592 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'r-bioc-edaseq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/r-pkg-team/r-bioc-edaseq.git Please use: git clone https://salsa.debian.org/r-pkg-team/r-bioc-edaseq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 127 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main r-bioc-edaseq 2.38.0+dfsg-1 (dsc) [2422 B] Get:2 http://deb.debian.org/debian unstable/main r-bioc-edaseq 2.38.0+dfsg-1 (tar) [119 kB] Get:3 http://deb.debian.org/debian unstable/main r-bioc-edaseq 2.38.0+dfsg-1 (diff) [5892 B] Fetched 127 kB in 0s (1592 kB/s) Download complete and in download only mode ============================================================================= Building r-bioc-edaseq in unstable on amd64 on ionos5-amd64 now. Date: Tue Feb 10 07:14:02 UTC 2026 Date UTC: Tue Feb 10 07:14:02 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Mon Feb 9 19:14:02 -12 2026 I: pbuilder-time-stamp: 1770707642 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-bioc-edaseq_2.38.0+dfsg-1.dsc] I: copying [./r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz] I: copying [./r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./r-bioc-edaseq_2.38.0+dfsg-1.dsc: unsupported subcommand dpkg-source: info: extracting r-bioc-edaseq in r-bioc-edaseq-2.38.0+dfsg dpkg-source: info: unpacking r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2298457/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='26fe3b0f936d4732beeabc9e03abdfc4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2298457' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej/pbuilderrc_Rcfs --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej/b1 --logfile b1/build.log r-bioc-edaseq_2.38.0+dfsg-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.11.10+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1~bpo12+1 (2024-12-19) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2298457/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase (>= 2.64.0), r-bioc-shortread (>= 1.62.0), r-bioc-biocgenerics (>= 0.50.0), r-bioc-iranges (>= 2.38.1), r-bioc-aroma.light (>= 3.34.0), r-bioc-rsamtools (>= 2.20.0), r-bioc-biomart (>= 2.60.1), r-bioc-biostrings (>= 2.72.1), r-bioc-annotationdbi (>= 1.66.0), r-bioc-genomicfeatures (>= 1.56.0), r-bioc-genomicranges (>= 1.56.1), r-cran-biocmanager dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19848 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biobase (>= 2.64.0); however: Package r-bioc-biobase is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-shortread (>= 1.62.0); however: Package r-bioc-shortread is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biocgenerics (>= 0.50.0); however: Package r-bioc-biocgenerics is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-iranges (>= 2.38.1); however: Package r-bioc-iranges is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-aroma.light (>= 3.34.0); however: Package r-bioc-aroma.light is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-rsamtools (>= 2.20.0); however: Package r-bioc-rsamtools is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biomart (>= 2.60.1); however: Package r-bioc-biomart is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biostrings (>= 2.72.1); however: Package r-bioc-biostrings is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-annotationdbi (>= 1.66.0); however: Package r-bioc-annotationdbi is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-genomicfeatures (>= 1.56.0); however: Package r-bioc-genomicfeatures is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-genomicranges (>= 1.56.1); however: Package r-bioc-genomicranges is not installed. pbuilder-satisfydepends-dummy depends on r-cran-biocmanager; however: Package r-cran-biocmanager is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtasn1-6{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} littler{a} m4{a} man-db{a} node-html5shiv{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-aroma.light{a} r-bioc-biobase{a} r-bioc-biocfilecache{a} r-bioc-biocgenerics{a} r-bioc-biocparallel{a} r-bioc-biomart{a} r-bioc-biostrings{a} r-bioc-delayedarray{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-genomicalignments{a} r-bioc-genomicranges{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-matrixgenerics{a} r-bioc-pwalign{a} r-bioc-rhtslib{a} r-bioc-rsamtools{a} r-bioc-s4arrays{a} r-bioc-s4vectors{a} r-bioc-shortread{a} r-bioc-sparsearray{a} r-bioc-summarizedexperiment{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-abind{a} r-cran-askpass{a} r-cran-bh{a} r-cran-biocmanager{a} r-cran-bit{a} r-cran-bit64{a} r-cran-bitops{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-codetools{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-dbi{a} r-cran-dbplyr{a} r-cran-deldir{a} r-cran-digest{a} r-cran-dplyr{a} r-cran-fansi{a} r-cran-fastmap{a} r-cran-filelock{a} r-cran-formatr{a} r-cran-futile.logger{a} r-cran-futile.options{a} r-cran-generics{a} r-cran-glue{a} r-cran-hms{a} r-cran-httr{a} r-cran-httr2{a} r-cran-hwriter{a} r-cran-interp{a} r-cran-jpeg{a} r-cran-jsonlite{a} r-cran-lambda.r{a} r-cran-lattice{a} r-cran-latticeextra{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-prettyunits{a} r-cran-progress{a} r-cran-purrr{a} r-cran-r.methodss3{a} r-cran-r.oo{a} r-cran-r.utils{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppeigen{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-snow{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-xml2{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl linux-sysctl-defaults lynx psmisc publicsuffix r-bioc-biocversion r-cran-base64enc r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-clipr r-cran-covr r-cran-data.table r-cran-dbitest r-cran-decor r-cran-desc r-cran-docopt r-cran-formattable r-cran-fs r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-markdown r-cran-microbenchmark r-cran-mockery r-cran-mockr r-cran-pkgdown r-cran-pkgload r-cran-processx r-cran-promises r-cran-ps r-cran-r.devices r-cran-r.rsp r-cran-readr r-cran-remotes r-cran-rmariadb r-cran-rmarkdown r-cran-rmysql r-cran-rpostgresql r-cran-rprojroot r-cran-rstudioapi r-cran-rvest r-cran-scales r-cran-sf r-cran-shiny r-cran-sodium r-cran-spelling r-cran-survival r-cran-testit r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 300 newly installed, 0 to remove and 0 not upgraded. Need to get 221 MB of archives. After unpacking 668 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: r-bioc-genomicfeatures (>= 1.56.0) but it is not installable Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtasn1-6{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} littler{a} m4{a} man-db{a} node-html5shiv{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-aroma.light{a} r-bioc-biobase{a} r-bioc-biocfilecache{a} r-bioc-biocgenerics{a} r-bioc-biocparallel{a} r-bioc-biomart{a} r-bioc-biostrings{a} r-bioc-delayedarray{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-genomicalignments{a} r-bioc-genomicranges{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-matrixgenerics{a} r-bioc-pwalign{a} r-bioc-rhtslib{a} r-bioc-rsamtools{a} r-bioc-s4arrays{a} r-bioc-s4vectors{a} r-bioc-shortread{a} r-bioc-sparsearray{a} r-bioc-summarizedexperiment{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-abind{a} r-cran-askpass{a} r-cran-bh{a} r-cran-biocmanager{a} r-cran-bit{a} r-cran-bit64{a} r-cran-bitops{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-codetools{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-dbi{a} r-cran-dbplyr{a} r-cran-deldir{a} r-cran-digest{a} r-cran-dplyr{a} r-cran-fansi{a} r-cran-fastmap{a} r-cran-filelock{a} r-cran-formatr{a} r-cran-futile.logger{a} r-cran-futile.options{a} r-cran-generics{a} r-cran-glue{a} r-cran-hms{a} r-cran-httr{a} r-cran-httr2{a} r-cran-hwriter{a} r-cran-interp{a} r-cran-jpeg{a} r-cran-jsonlite{a} r-cran-lambda.r{a} r-cran-lattice{a} r-cran-latticeextra{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-prettyunits{a} r-cran-progress{a} r-cran-purrr{a} r-cran-r.methodss3{a} r-cran-r.oo{a} r-cran-r.utils{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppeigen{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-snow{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-xml2{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl linux-sysctl-defaults lynx psmisc publicsuffix r-bioc-biocversion r-cran-base64enc r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-clipr r-cran-covr r-cran-data.table r-cran-dbitest r-cran-decor r-cran-desc r-cran-docopt r-cran-formattable r-cran-fs r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-markdown r-cran-microbenchmark r-cran-mockery r-cran-mockr r-cran-pkgdown r-cran-pkgload r-cran-processx r-cran-promises r-cran-ps r-cran-r.devices r-cran-r.rsp r-cran-readr r-cran-remotes r-cran-rmariadb r-cran-rmarkdown r-cran-rmysql r-cran-rpostgresql r-cran-rprojroot r-cran-rstudioapi r-cran-rvest r-cran-scales r-cran-sf r-cran-shiny r-cran-sodium r-cran-spelling r-cran-survival r-cran-testit r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 300 newly installed, 0 to remove and 0 not upgraded. Need to get 221 MB of archives. After unpacking 668 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2298457 and its subdirectories Starting cleanup. All cleanup done. Tue Feb 10 07:14:21 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-fHlLjnAF, removing. /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Jan 8 00:51 b1 drwxr-xr-x 2 jenkins jenkins 4096 Jan 8 00:51 b2 -rw-r--r-- 1 jenkins jenkins 2422 Aug 18 13:14 r-bioc-edaseq_2.38.0+dfsg-1.dsc -rw------- 1 jenkins jenkins 3596 Jan 8 00:51 rbuildlog.XTFk4G9 /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej/b1: total 24 -rw-r--r-- 1 jenkins jenkins 21235 Jan 8 00:51 build.log /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej/b2: total 0 Wed Jan 8 00:51:21 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Feb 9 19:14:02 -12 2026 I: pbuilder-time-stamp: 1770707642 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-bioc-edaseq_2.38.0+dfsg-1.dsc] I: copying [./r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz] I: copying [./r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./r-bioc-edaseq_2.38.0+dfsg-1.dsc: unsupported subcommand dpkg-source: info: extracting r-bioc-edaseq in r-bioc-edaseq-2.38.0+dfsg dpkg-source: info: unpacking r-bioc-edaseq_2.38.0+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-edaseq_2.38.0+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2298457/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='26fe3b0f936d4732beeabc9e03abdfc4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2298457' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej/pbuilderrc_Rcfs --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ff1Jheej/b1 --logfile b1/build.log r-bioc-edaseq_2.38.0+dfsg-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.11.10+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1~bpo12+1 (2024-12-19) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2298457/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-biobase (>= 2.64.0), r-bioc-shortread (>= 1.62.0), r-bioc-biocgenerics (>= 0.50.0), r-bioc-iranges (>= 2.38.1), r-bioc-aroma.light (>= 3.34.0), r-bioc-rsamtools (>= 2.20.0), r-bioc-biomart (>= 2.60.1), r-bioc-biostrings (>= 2.72.1), r-bioc-annotationdbi (>= 1.66.0), r-bioc-genomicfeatures (>= 1.56.0), r-bioc-genomicranges (>= 1.56.1), r-cran-biocmanager dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19848 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biobase (>= 2.64.0); however: Package r-bioc-biobase is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-shortread (>= 1.62.0); however: Package r-bioc-shortread is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biocgenerics (>= 0.50.0); however: Package r-bioc-biocgenerics is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-iranges (>= 2.38.1); however: Package r-bioc-iranges is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-aroma.light (>= 3.34.0); however: Package r-bioc-aroma.light is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-rsamtools (>= 2.20.0); however: Package r-bioc-rsamtools is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biomart (>= 2.60.1); however: Package r-bioc-biomart is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biostrings (>= 2.72.1); however: Package r-bioc-biostrings is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-annotationdbi (>= 1.66.0); however: Package r-bioc-annotationdbi is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-genomicfeatures (>= 1.56.0); however: Package r-bioc-genomicfeatures is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-genomicranges (>= 1.56.1); however: Package r-bioc-genomicranges is not installed. pbuilder-satisfydepends-dummy depends on r-cran-biocmanager; however: Package r-cran-biocmanager is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtasn1-6{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} littler{a} m4{a} man-db{a} node-html5shiv{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-aroma.light{a} r-bioc-biobase{a} r-bioc-biocfilecache{a} r-bioc-biocgenerics{a} r-bioc-biocparallel{a} r-bioc-biomart{a} r-bioc-biostrings{a} r-bioc-delayedarray{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-genomicalignments{a} r-bioc-genomicranges{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-matrixgenerics{a} r-bioc-pwalign{a} r-bioc-rhtslib{a} r-bioc-rsamtools{a} r-bioc-s4arrays{a} r-bioc-s4vectors{a} r-bioc-shortread{a} r-bioc-sparsearray{a} r-bioc-summarizedexperiment{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-abind{a} r-cran-askpass{a} r-cran-bh{a} r-cran-biocmanager{a} r-cran-bit{a} r-cran-bit64{a} r-cran-bitops{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-codetools{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-dbi{a} r-cran-dbplyr{a} r-cran-deldir{a} r-cran-digest{a} r-cran-dplyr{a} r-cran-fansi{a} r-cran-fastmap{a} r-cran-filelock{a} r-cran-formatr{a} r-cran-futile.logger{a} r-cran-futile.options{a} r-cran-generics{a} r-cran-glue{a} r-cran-hms{a} r-cran-httr{a} r-cran-httr2{a} r-cran-hwriter{a} r-cran-interp{a} r-cran-jpeg{a} r-cran-jsonlite{a} r-cran-lambda.r{a} r-cran-lattice{a} r-cran-latticeextra{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-prettyunits{a} r-cran-progress{a} r-cran-purrr{a} r-cran-r.methodss3{a} r-cran-r.oo{a} r-cran-r.utils{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppeigen{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-snow{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-xml2{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl linux-sysctl-defaults lynx psmisc publicsuffix r-bioc-biocversion r-cran-base64enc r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-clipr r-cran-covr r-cran-data.table r-cran-dbitest r-cran-decor r-cran-desc r-cran-docopt r-cran-formattable r-cran-fs r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-markdown r-cran-microbenchmark r-cran-mockery r-cran-mockr r-cran-pkgdown r-cran-pkgload r-cran-processx r-cran-promises r-cran-ps r-cran-r.devices r-cran-r.rsp r-cran-readr r-cran-remotes r-cran-rmariadb r-cran-rmarkdown r-cran-rmysql r-cran-rpostgresql r-cran-rprojroot r-cran-rstudioapi r-cran-rvest r-cran-scales r-cran-sf r-cran-shiny r-cran-sodium r-cran-spelling r-cran-survival r-cran-testit r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 300 newly installed, 0 to remove and 0 not upgraded. Need to get 221 MB of archives. After unpacking 668 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: r-bioc-genomicfeatures (>= 1.56.0) but it is not installable Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gfortran-x86-64-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgnutls30t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtasn1-6{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} littler{a} m4{a} man-db{a} node-html5shiv{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} r-base-core{a} r-base-dev{a} r-bioc-annotationdbi{a} r-bioc-aroma.light{a} r-bioc-biobase{a} r-bioc-biocfilecache{a} r-bioc-biocgenerics{a} r-bioc-biocparallel{a} r-bioc-biomart{a} r-bioc-biostrings{a} r-bioc-delayedarray{a} r-bioc-genomeinfodb{a} r-bioc-genomeinfodbdata{a} r-bioc-genomicalignments{a} r-bioc-genomicranges{a} r-bioc-iranges{a} r-bioc-keggrest{a} r-bioc-matrixgenerics{a} r-bioc-pwalign{a} r-bioc-rhtslib{a} r-bioc-rsamtools{a} r-bioc-s4arrays{a} r-bioc-s4vectors{a} r-bioc-shortread{a} r-bioc-sparsearray{a} r-bioc-summarizedexperiment{a} r-bioc-ucsc.utils{a} r-bioc-xvector{a} r-bioc-zlibbioc{a} r-cran-abind{a} r-cran-askpass{a} r-cran-bh{a} r-cran-biocmanager{a} r-cran-bit{a} r-cran-bit64{a} r-cran-bitops{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-codetools{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-curl{a} r-cran-dbi{a} r-cran-dbplyr{a} r-cran-deldir{a} r-cran-digest{a} r-cran-dplyr{a} r-cran-fansi{a} r-cran-fastmap{a} r-cran-filelock{a} r-cran-formatr{a} r-cran-futile.logger{a} r-cran-futile.options{a} r-cran-generics{a} r-cran-glue{a} r-cran-hms{a} r-cran-httr{a} r-cran-httr2{a} r-cran-hwriter{a} r-cran-interp{a} r-cran-jpeg{a} r-cran-jsonlite{a} r-cran-lambda.r{a} r-cran-lattice{a} r-cran-latticeextra{a} r-cran-lifecycle{a} r-cran-littler{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-plogr{a} r-cran-png{a} r-cran-prettyunits{a} r-cran-progress{a} r-cran-purrr{a} r-cran-r.methodss3{a} r-cran-r.oo{a} r-cran-r.utils{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppeigen{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-snow{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-withr{a} r-cran-xml2{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl linux-sysctl-defaults lynx psmisc publicsuffix r-bioc-biocversion r-cran-base64enc r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-clipr r-cran-covr r-cran-data.table r-cran-dbitest r-cran-decor r-cran-desc r-cran-docopt r-cran-formattable r-cran-fs r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-markdown r-cran-microbenchmark r-cran-mockery r-cran-mockr r-cran-pkgdown r-cran-pkgload r-cran-processx r-cran-promises r-cran-ps r-cran-r.devices r-cran-r.rsp r-cran-readr r-cran-remotes r-cran-rmariadb r-cran-rmarkdown r-cran-rmysql r-cran-rpostgresql r-cran-rprojroot r-cran-rstudioapi r-cran-rvest r-cran-scales r-cran-sf r-cran-shiny r-cran-sodium r-cran-spelling r-cran-survival r-cran-testit r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 300 newly installed, 0 to remove and 0 not upgraded. Need to get 221 MB of archives. After unpacking 668 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2298457 and its subdirectories r-bioc-edaseq failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.build1.log.gz' Wed Jan 8 00:51:22 UTC 2025 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 77.3% -- replaced with stdout Wed Jan 8 00:51:22 UTC 2025 W: Downloading the build dependencies failed Wed Jan 8 00:51:22 UTC 2025 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Wed Jan 8 00:51:22 UTC 2025 W: Network problems are automatically rescheduled after some hours. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-01-08 00:51:23] INFO: Starting at 2025-01-08 00:51:23.428338 [2025-01-08 00:51:23] INFO: Generating the pages of 1 package(s) [2025-01-08 00:51:23] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/r-bioc-edaseq didn't produce a buildlog, even though it has been built. [2025-01-08 00:51:23] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:23] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:23] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:23] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/armhf/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:23] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/experimental/armhf/r-bioc-edaseq_2.40.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/experimental/armhf/r-bioc-edaseq_2.40.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/experimental/i386/r-bioc-edaseq_2.40.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/experimental/i386/r-bioc-edaseq_2.40.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] INFO: Finished at 2025-01-08 00:51:24.118432, took: 0:00:00.690100 Wed Jan 8 00:51:24 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/r-bioc-edaseq.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.rbuild.log: 73.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.rbuild.log.gz [2025-01-08 00:51:24] INFO: Starting at 2025-01-08 00:51:24.493058 [2025-01-08 00:51:24] INFO: Generating the pages of 1 package(s) [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/armhf/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:24] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/r-bioc-edaseq_2.38.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/r-bioc-edaseq_2.38.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:25] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/experimental/armhf/r-bioc-edaseq_2.40.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/experimental/armhf/r-bioc-edaseq_2.40.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:25] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/experimental/i386/r-bioc-edaseq_2.40.0+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/experimental/i386/r-bioc-edaseq_2.40.0+dfsg-1.diff.gz is missing [2025-01-08 00:51:25] INFO: Finished at 2025-01-08 00:51:25.083647, took: 0:00:00.590596 All cleanup done. Wed Jan 8 00:51:25 UTC 2025 - total duration: 0h 0m 37s. Wed Jan 8 00:51:25 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-f4V3I0nB, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 40.127s CPU time consumed: 5.861s