Running as unit: rb-build-amd64_11-36473.service ==================================================================================== Fri Nov 22 23:01:08 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_11) on jenkins, called using "ionos1-amd64 ionos15-amd64" as arguments. Fri Nov 22 23:01:08 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-FxNvl0Cj" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 23:01:09 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Nov 22 23:01:09 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-2dD6N9' Fri Nov 22 23:01:09 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Fri Nov 22 23:01:09 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-4iJ0xY' ok, let's check if libchemistry-mol-perl is building anywhere yet… ok, libchemistry-mol-perl is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of libchemistry-mol-perl in unstable on amd64 on jenkins now. 1st build will be done on ionos1-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Fri Nov 22 23:01:33 UTC 2024 I: starting to build libchemistry-mol-perl/unstable/amd64 on jenkins on '2024-11-22 23:01' Fri Nov 22 23:01:33 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_11/36473/console.log 1732316493 amd64 unstable libchemistry-mol-perl Fri Nov 22 23:01:33 UTC 2024 I: Downloading source for unstable/libchemistry-mol-perl=0.39-1 --2024-11-22 23:01:33-- http://deb.debian.org/debian/pool/main/libc/libchemistry-mol-perl/libchemistry-mol-perl_0.39-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2326 (2.3K) [text/prs.lines.tag] Saving to: ‘libchemistry-mol-perl_0.39-1.dsc’ 0K .. 100% 200M=0s 2024-11-22 23:01:33 (200 MB/s) - ‘libchemistry-mol-perl_0.39-1.dsc’ saved [2326/2326] --2024-11-22 23:01:33-- http://deb.debian.org/debian/pool/main/libc/libchemistry-mol-perl/libchemistry-mol-perl_0.39-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2326 (2.3K) [text/prs.lines.tag] Saving to: ‘libchemistry-mol-perl_0.39-1.dsc’ 0K .. 100% 200M=0s 2024-11-22 23:01:33 (200 MB/s) - ‘libchemistry-mol-perl_0.39-1.dsc’ saved [2326/2326] Fri Nov 22 23:01:33 UTC 2024 I: libchemistry-mol-perl_0.39-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libchemistry-mol-perl Binary: libchemistry-mol-perl Architecture: all Version: 0.39-1 Maintainer: Debian Perl Group Uploaders: Andrius Merkys , Homepage: https://metacpan.org/release/Chemistry-Mol Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl Vcs-Git: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 13) Build-Depends-Indep: libclone-perl , libio-string-perl , libmath-vectorreal-perl , libscalar-list-utils-perl , libtest-simple-perl , perl Package-List: libchemistry-mol-perl deb perl optional arch=all Checksums-Sha1: 8b2d5e384cb89b828f400ebd4ac55ad282e7df9f 44747 libchemistry-mol-perl_0.39.orig.tar.gz dfb37861ec7c9113c790f0df4cc332253e5a65e5 1724 libchemistry-mol-perl_0.39-1.debian.tar.xz Checksums-Sha256: 1fc7b65e3ee0e77410c55e12493018a0722e14df6e4ed553fdef68144feaeba4 44747 libchemistry-mol-perl_0.39.orig.tar.gz aa9091b063d92657b050b4a5774a42e282373c87d11d0def55fc41aea7b420cd 1724 libchemistry-mol-perl_0.39-1.debian.tar.xz Files: 7824e55c3fb76c33addd81d61d6bd47e 44747 libchemistry-mol-perl_0.39.orig.tar.gz 04261c92f6d3e16b71af67b03ae3f62a 1724 libchemistry-mol-perl_0.39-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmLQC/sSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHnfwP/2joPA+Sf29a46mQ3bA5t4vmeUqdNcq0 v34YRY4Ekh04nDBVtTEcJP3ZLpzWaj71efIn1C4U9tIMbV57QRZSoejuJD+ekw9S c4zw4nwlXYXvO+Al2LnwvLfmY5iHZaH8XM5XcIFpyOV/qLNQPCaYJobqTnrKERTl xpb0Gzv7mCw+t2hZR6Hg4GX3Z/aITCAAKTDX37JK4g6kMJGbjdzBXGXYayUwyERp nTqRPuBDHBggYBZfkJiny3s0e6RUCf1fqpdQTq2tUQENnHdak5Xcq8h0Ty2/Qc1e 07y5uNrCDhlxipKX4uSo6sHcq6pzKmJJKg16/vxBU8uhbOjsQuexSzkEKbvXj86Z FEP7o8PFqrFxlDfCngXJK+1k75JZtTMNkBIf2rGQS+7ko0xgAd/hY3/m/t3RFess yXmGj/A0G8fSdI6gSpTOoFsQMyq8F41gw9Pmq3tZL1PlHHCjBZYwFu3wbUk9O5Ii d+AzL6+ZQGoxfAHuXPL822gClKBz3/CkFjqkQtLWkT41UUcXfq5N/99liUXC02nj xbMiZOwnquwzUeDjoGg4Yz3ug4HNiu6cWMa07SHUT8Zx/AcYk+mRS1CO2lqrrLKc +EG9cT4xNl3Ui134dx+nC2rdrHTVgn9t5LmeGRQ+UJ7lERs2ygd/UGjl09LCjPVZ a2ggiVYC3n/M =r246 -----END PGP SIGNATURE----- Fri Nov 22 23:01:33 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 23:01:33 UTC 2024 I: Starting 1st build on remote node ionos1-amd64.debian.net. Fri Nov 22 23:01:33 UTC 2024 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Fri Nov 22 23:01:33 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Nov 22 23:01:33 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-oAabr8' ==================================================================================== Fri Nov 22 23:01:34 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "1 libchemistry-mol-perl unstable /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R 0.39-1" as arguments. Fri Nov 22 23:01:34 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-8yoJDhDF" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 23:01:34 UTC 2024 I: Downloading source for unstable/libchemistry-mol-perl=0.39-1 Reading package lists... NOTICE: 'libchemistry-mol-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Please use: git clone https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 48.8 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (dsc) [2326 B] Get:2 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (tar) [44.7 kB] Get:3 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (diff) [1724 B] Fetched 48.8 kB in 0s (1341 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libchemistry-mol-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Please use: git clone https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 48.8 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (dsc) [2326 B] Get:2 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (tar) [44.7 kB] Get:3 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (diff) [1724 B] Fetched 48.8 kB in 0s (1341 kB/s) Download complete and in download only mode ============================================================================= Building libchemistry-mol-perl in unstable on amd64 on ionos1-amd64 now. Date: Fri Nov 22 23:01:34 UTC 2024 Date UTC: Fri Nov 22 23:01:34 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 11:01:35 -12 2024 I: pbuilder-time-stamp: 1732316495 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchemistry-mol-perl_0.39-1.dsc] I: copying [./libchemistry-mol-perl_0.39.orig.tar.gz] I: copying [./libchemistry-mol-perl_0.39-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 14 12:28:43 2022 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libchemistry-mol-perl_0.39-1.dsc: no acceptable signature found dpkg-source: info: extracting libchemistry-mol-perl in libchemistry-mol-perl-0.39 dpkg-source: info: unpacking libchemistry-mol-perl_0.39.orig.tar.gz dpkg-source: info: unpacking libchemistry-mol-perl_0.39-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2783975/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3c41261c5bea42e8a1a35d02b41f2bd4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2783975' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_Y6cw --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1 --logfile b1/build.log libchemistry-mol-perl_0.39-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2783975/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libclone-perl, libio-string-perl, libmath-vectorreal-perl, libscalar-list-utils-perl, libtest-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libclone-perl; however: Package libclone-perl is not installed. pbuilder-satisfydepends-dummy depends on libio-string-perl; however: Package libio-string-perl is not installed. pbuilder-satisfydepends-dummy depends on libmath-vectorreal-perl; however: Package libmath-vectorreal-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libclone-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libio-string-perl{a} libmagic-mgc{a} libmagic1t64{a} libmath-vectorreal-perl{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After unpacking 75.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libmath-vectorreal-perl all 1.02-3 [14.8 kB] Fetched 19.9 MB in 1s (36.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../29-libclone-perl_0.47-1+b1_amd64.deb ... Unpacking libclone-perl:amd64 (0.47-1+b1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../30-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libmath-vectorreal-perl. Preparing to unpack .../31-libmath-vectorreal-perl_1.02-3_all.deb ... Unpacking libmath-vectorreal-perl (1.02-3) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libmath-vectorreal-perl (1.02-3) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libchemistry-mol-perl-0.39/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libchemistry-mol-perl_0.39-1_source.changes dpkg-buildpackage: info: source package libchemistry-mol-perl dpkg-buildpackage: info: source version 0.39-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Chemistry::Mol Writing MYMETA.yml and MYMETA.json dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' cp lib/Chemistry/Bond.pm blib/lib/Chemistry/Bond.pm cp lib/Chemistry/File.pm blib/lib/Chemistry/File.pm cp lib/Chemistry/File/Formula.pm blib/lib/Chemistry/File/Formula.pm cp lib/Chemistry/Mol.pm blib/lib/Chemistry/Mol.pm cp lib/Chemistry/File/Dumper.pm blib/lib/Chemistry/File/Dumper.pm cp lib/Chemistry/Obj.pm blib/lib/Chemistry/Obj.pm cp Tutorial.pod blib/lib/Chemistry/Tutorial.pod cp lib/Chemistry/Atom.pm blib/lib/Chemistry/Atom.pm Manifying 8 pod documents make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_auto_test make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/add_implicit_h.t .. 1..21 ok 1 - _calc_implicit_hydrogens(C 1 0 0) == 3 ok 2 - _calc_implicit_hydrogens(C 4 0 0) == 0 ok 3 - _calc_implicit_hydrogens(C 1 1 0) == 2 ok 4 - _calc_implicit_hydrogens(C 1 -1 0) == 2 ok 5 - _calc_implicit_hydrogens(C 1 0 1) == 1 ok 6 - _calc_implicit_hydrogens(C 1 0 3) == 1 ok 7 - _calc_implicit_hydrogens(C 1 0 2) == 2 ok 8 - _calc_implicit_hydrogens(O 1 -1 0) == 0 ok 9 - _calc_implicit_hydrogens(O 1 1 0) == 2 ok 10 - _calc_implicit_hydrogens(N 4 1 0) == 0 ok 11 - _calc_implicit_hydrogens(N 2 1 0) == 2 ok 12 - _calc_implicit_hydrogens(N 2 -1 0) == 0 ok 13 - _calc_implicit_hydrogens(N 1 0 3) == 0 ok 14 - _calc_implicit_hydrogens(B 1 -1 0) == 3 ok 15 - _calc_implicit_hydrogens(Cl 0 -1 0) == 0 ok 16 - _calc_implicit_hydrogens(Cl 0 0 0) == 1 ok 17 - _calc_implicit_hydrogens(Cl 0 0 2) == 0 ok 18 - _calc_implicit_hydrogens(Cl 0 1 0) == 1 ok 19 - C==1 ok 20 - O==0 ok 21 - N==2 ok t/Atom.t ............ 1..49 ok 1 - use Chemistry::Atom; ok 2 - use Chemistry::Mol; ok 3 - use Math::VectorReal; ok 4 - 'blank atom' isa 'Chemistry::Atom' ok 5 - 'blank atom' isa 'Chemistry::Obj' ok 6 - symbol -> symbol ok 7 - symbol -> Z ok 8 - Z -> Z ok 9 - Z -> symbol ok 10 - default mass ok 11 - arbitrary mass ok 12 - aromatic default ok 13 - aromatic ok 14 - hydrogens default ok 15 - total_hydrogens default ok 16 - implicit_hydrogens default ok 17 - hydrogens ok 18 - implicit_hydrogens ok 19 - total_hydrogens ok 20 - hydrogens ok 21 - implicit_hydrogens ok 22 - total_hydrogens ok 23 - explicit_valence ok 24 - valence ok 25 - hydrogens ok 26 - implicit_hydrogens ok 27 - total_hydrogens ok 28 - explicit_valence ok 29 - valence ok 30 - hydrogens ok 31 - implicit_hydrogens ok 32 - total_hydrogens ok 33 - explicit_valence ok 34 - valence ok 35 - distance(coords(arrayref)) ok 36 - An object of class 'Math::VectorReal' isa 'Math::VectorReal' ok 37 - distance(coords(vector)) ok 38 - distance(coords(list)) ok 39 - x3 ok 40 - y3 ok 41 - z3 ok 42 - distance(vector) ok 43 - sprintf - %s ok 44 - sprintf - %Z ok 45 - sprintf - %x,%y,%z ok 46 - 1H mass ok 47 - 2H mass number ok 48 - 2H mass ok 49 - 10H mass ok t/Bond.t ............ 1..17 ok 1 - mol atom count ok 2 - mol bond count ok 3 - bond atom count ok 4 - atom bond count ok 5 - atom bond count ok 6 - deleted the bond ok 7 - mol atom count ok 8 - mol bond count ok 9 - bond atom count ok 10 - atom bond count ok 11 - atom bond count ok 12 - readded the bond ok 13 - mol atom count ok 14 - mol bond count ok 15 - bond atom count ok 16 - atom bond count ok 17 - atom bond count ok t/change_id.t ....... 1..5 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - id before ok 3 - id matches before ok 4 - id after ok 5 - id matches after ok t/compat.t .......... 1..1 ok 1 ok t/delete.t .......... 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - bonds before ok 4 - delete bond ok 5 - delete atom obj - bonds ok 6 - delete atom obj - atoms ok 7 - delete atom index - bonds ok 8 - delete atom index - atoms ok t/descriptor.t ...... ok 1 - number_of_atoms == 8 1..1 ok t/Dumper.t .......... 1..6 ok 1 - use Chemistry::File::Dumper; ok 2 - 'read' isa 'Chemistry::Mol' ok 3 - 'read (autodetect)' isa 'Chemistry::Mol' ok 4 - dump and compare ok 5 - write and read and compare ok 6 - deep compare ok t/exception.t ....... skipped: You don't have Test::Exception installed t/File.t ............ 1..15 ok 1 - use Chemistry::File; ok 2 - An object of class 'Chemistry::File' isa 'Chemistry::File' ok 3 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 4 - 'read file' isa 'Chemistry::Mol' ok 5 - atoms ok 6 - 'read string' isa 'Chemistry::Mol' ok 7 - atoms ok 8 - read mollist ok 9 - list name ok 10 - list footer ok 11 - mol name ok 12 - mol price ok 13 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 14 - 'Chemistry::Mol->read' isa 'Chemistry::Mol' ok 15 - atoms ok t/Formula.t ......... 1..18 ok 1 - use Chemistry::File::Formula; ok 2 - 'parse isa mol' isa 'Chemistry::Mol' ok 3 - enough atoms ok 4 - formula format ok 5 - formula hash 1[Ph(Me)3]2 ok 6 - CH3(CH2)3CH3 = C5H12 ok 7 - C6H3Me3 = C9H12 ok 8 - 2Cu[NH3]4(NO3)2 = Cu2H24N12O12 ok 9 - 2C(C[C5]4)3 = C152 ok 10 - 2C(C(C(C)5)4)3 = C152 ok 11 - C 1 0 H 2 2 = C10H22 ok 12 - CH3Br = CH3Br ok 13 - CH3.1Br0.9 = CH4Br ok 14 - 1.5H2O = H3O2 ok 15 - H(CH2)3.5H = C4H9 ok 16 - parse_formula ok 17 - parse_formula (non-integer) ok 18 - formula_sort ok t/geom.t ............ 1..10 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - three atoms ok 3 - angle ok 4 - dihedral ok 5 - zero angle ok 6 - bad angle ok 7 - bad angle ok 8 - linear angle ok 9 - bad dihedral ok 10 - bad dihedral ok t/graph.t ........... 1..12 ok 1 - clone by Clone ok 2 - clone by Storable ok 3 - got 2 things ok 4 - separate: two mols ok 5 - mol 1 is CClH2 ok 6 - mol 2 is CHO2 ok 7 - bond count for a2 equal to a2 (3)? ok 8 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 9 - combine-new; atoms ok 10 - combine-new; bonds ok 11 - combine-new; formula ok 12 - combine-in place ok t/mem.t ............. 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - delete one atom - atoms ok 4 - delete one atom - bonds ok 5 - delete one atom - mols ok 6 - out of scope - atoms ok 7 - out of scope - bonds ok 8 - out of scope - mols ok t/Mol.t ............. 1..20 ok 1 - use Chemistry::Mol; ok 2 - '$mol' isa 'Chemistry::Mol' ok 3 - '$mol' isa 'Chemistry::Obj' ok 4 - '$atom' isa 'Chemistry::Atom' ok 5 - '$atom' isa 'Chemistry::Obj' ok 6 - '$bond' isa 'Chemistry::Bond' ok 7 - '$bond' isa 'Chemistry::Obj' ok 8 - $mol->atoms ok 9 - $mol->atoms(1) eq $atom ok 10 - $mol->by_id ok 11 - $mol->atoms_by_name ok 12 - $mol->bonds ok 13 - $mol->bonds(1) eq $bond ok 14 - $mol->new_atom ok 15 - $mol->mass ok 16 - $mol->mass ok 17 - before sprout_hydrogens ok 18 - after sprout_hydrogens ok 19 - before sprout_hydrogens ok 20 - $bond->length ok t/Obj.t ............. 1..19 ok 1 - use Chemistry::Obj; ok 2 - 'blank obj' isa 'Chemistry::Obj' ok 3 - name ok 4 - joe01 ok 5 - type ok 6 - stringify ok 7 - eq ok 8 - != ok 9 - == ok 10 - ne ok 11 - attr ok 12 - attr list ok 13 - attr list ok 14 - attr hashref ok 15 - attr hashref ok 16 - attr get hashref ok 17 - del_attr ok 18 - accessor ok 19 - chained accessor ok t/pod.t ............. skipped: You don't have Test::Pod installed t/safe_clone.t ...... 1..9 ok 1 - atom(1) before clone ok 2 - bond(1) before clone ok 3 - mol->id before clone ok 4 - atom(1) after clone ok 5 - bond(1) after clone ok 6 - mol->id after clone ok 7 - atom(1) after safe_clone ok 8 - bond(1) after safe_clone ok 9 - mol->id after safe clone ok t/zlib.t ............ 1..6 ok 1 - 'explicit decompressed read' isa 'Chemistry::Mol' ok 2 - has 8 atoms ok 3 - 'implicit decompressed read' isa 'Chemistry::Mol' ok 4 - has 8 atoms ok 5 - compressed ok ok 6 - implicit compression on output ok All tests successful. Files=19, Tests=225, 3 wallclock secs ( 0.09 usr 0.04 sys + 2.26 cusr 0.40 csys = 2.79 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libchemistry-mol-perl/ make -j20 install DESTDIR=/build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' Manifying 8 pod documents Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Mol.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Tutorial.pod Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Bond.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Atom.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Obj.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Dumper.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Formula.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Bond.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Mol.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Formula.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Tutorial.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Atom.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Dumper.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Obj.3pm make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libchemistry-mol-perl' in '../libchemistry-mol-perl_0.39-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2783975 and its subdirectories I: Current time: Fri Nov 22 11:02:23 -12 2024 I: pbuilder-time-stamp: 1732316543 Fri Nov 22 23:02:23 UTC 2024 I: Signing ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo as libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc Fri Nov 22 23:02:24 UTC 2024 I: Signed ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo as ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc Fri Nov 22 23:02:24 UTC 2024 - build #1 for libchemistry-mol-perl/unstable/amd64 on ionos1-amd64 done. Starting cleanup. All cleanup done. Fri Nov 22 23:02:24 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-8yoJDhDF, removing. /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 23:02 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 23:01 b2 -rw-r--r-- 1 jenkins jenkins 2326 Jul 14 2022 libchemistry-mol-perl_0.39-1.dsc -rw------- 1 jenkins jenkins 3522 Nov 22 23:01 rbuildlog.AOt3Skt /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1: total 172 -rw-r--r-- 1 jenkins jenkins 30127 Nov 22 23:02 build.log -rw-r--r-- 1 jenkins jenkins 1724 Nov 22 23:02 libchemistry-mol-perl_0.39-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2326 Nov 22 23:02 libchemistry-mol-perl_0.39-1.dsc -rw-r--r-- 1 jenkins jenkins 63184 Nov 22 23:02 libchemistry-mol-perl_0.39-1_all.deb -rw-r--r-- 1 jenkins jenkins 4831 Nov 22 23:02 libchemistry-mol-perl_0.39-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5713 Nov 22 23:02 libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1188 Nov 22 23:02 libchemistry-mol-perl_0.39-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1675 Nov 22 23:02 libchemistry-mol-perl_0.39-1_source.changes -rw-r--r-- 1 jenkins jenkins 44747 Nov 22 23:02 libchemistry-mol-perl_0.39.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b2: total 0 Fri Nov 22 23:02:24 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 11:01:35 -12 2024 I: pbuilder-time-stamp: 1732316495 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchemistry-mol-perl_0.39-1.dsc] I: copying [./libchemistry-mol-perl_0.39.orig.tar.gz] I: copying [./libchemistry-mol-perl_0.39-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 14 12:28:43 2022 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libchemistry-mol-perl_0.39-1.dsc: no acceptable signature found dpkg-source: info: extracting libchemistry-mol-perl in libchemistry-mol-perl-0.39 dpkg-source: info: unpacking libchemistry-mol-perl_0.39.orig.tar.gz dpkg-source: info: unpacking libchemistry-mol-perl_0.39-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2783975/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3c41261c5bea42e8a1a35d02b41f2bd4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2783975' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_Y6cw --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1 --logfile b1/build.log libchemistry-mol-perl_0.39-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2783975/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libclone-perl, libio-string-perl, libmath-vectorreal-perl, libscalar-list-utils-perl, libtest-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libclone-perl; however: Package libclone-perl is not installed. pbuilder-satisfydepends-dummy depends on libio-string-perl; however: Package libio-string-perl is not installed. pbuilder-satisfydepends-dummy depends on libmath-vectorreal-perl; however: Package libmath-vectorreal-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libclone-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libio-string-perl{a} libmagic-mgc{a} libmagic1t64{a} libmath-vectorreal-perl{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After unpacking 75.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libmath-vectorreal-perl all 1.02-3 [14.8 kB] Fetched 19.9 MB in 1s (36.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../29-libclone-perl_0.47-1+b1_amd64.deb ... Unpacking libclone-perl:amd64 (0.47-1+b1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../30-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libmath-vectorreal-perl. Preparing to unpack .../31-libmath-vectorreal-perl_1.02-3_all.deb ... Unpacking libmath-vectorreal-perl (1.02-3) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libmath-vectorreal-perl (1.02-3) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libchemistry-mol-perl-0.39/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libchemistry-mol-perl_0.39-1_source.changes dpkg-buildpackage: info: source package libchemistry-mol-perl dpkg-buildpackage: info: source version 0.39-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Chemistry::Mol Writing MYMETA.yml and MYMETA.json dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' cp lib/Chemistry/Bond.pm blib/lib/Chemistry/Bond.pm cp lib/Chemistry/File.pm blib/lib/Chemistry/File.pm cp lib/Chemistry/File/Formula.pm blib/lib/Chemistry/File/Formula.pm cp lib/Chemistry/Mol.pm blib/lib/Chemistry/Mol.pm cp lib/Chemistry/File/Dumper.pm blib/lib/Chemistry/File/Dumper.pm cp lib/Chemistry/Obj.pm blib/lib/Chemistry/Obj.pm cp Tutorial.pod blib/lib/Chemistry/Tutorial.pod cp lib/Chemistry/Atom.pm blib/lib/Chemistry/Atom.pm Manifying 8 pod documents make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_auto_test make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/add_implicit_h.t .. 1..21 ok 1 - _calc_implicit_hydrogens(C 1 0 0) == 3 ok 2 - _calc_implicit_hydrogens(C 4 0 0) == 0 ok 3 - _calc_implicit_hydrogens(C 1 1 0) == 2 ok 4 - _calc_implicit_hydrogens(C 1 -1 0) == 2 ok 5 - _calc_implicit_hydrogens(C 1 0 1) == 1 ok 6 - _calc_implicit_hydrogens(C 1 0 3) == 1 ok 7 - _calc_implicit_hydrogens(C 1 0 2) == 2 ok 8 - _calc_implicit_hydrogens(O 1 -1 0) == 0 ok 9 - _calc_implicit_hydrogens(O 1 1 0) == 2 ok 10 - _calc_implicit_hydrogens(N 4 1 0) == 0 ok 11 - _calc_implicit_hydrogens(N 2 1 0) == 2 ok 12 - _calc_implicit_hydrogens(N 2 -1 0) == 0 ok 13 - _calc_implicit_hydrogens(N 1 0 3) == 0 ok 14 - _calc_implicit_hydrogens(B 1 -1 0) == 3 ok 15 - _calc_implicit_hydrogens(Cl 0 -1 0) == 0 ok 16 - _calc_implicit_hydrogens(Cl 0 0 0) == 1 ok 17 - _calc_implicit_hydrogens(Cl 0 0 2) == 0 ok 18 - _calc_implicit_hydrogens(Cl 0 1 0) == 1 ok 19 - C==1 ok 20 - O==0 ok 21 - N==2 ok t/Atom.t ............ 1..49 ok 1 - use Chemistry::Atom; ok 2 - use Chemistry::Mol; ok 3 - use Math::VectorReal; ok 4 - 'blank atom' isa 'Chemistry::Atom' ok 5 - 'blank atom' isa 'Chemistry::Obj' ok 6 - symbol -> symbol ok 7 - symbol -> Z ok 8 - Z -> Z ok 9 - Z -> symbol ok 10 - default mass ok 11 - arbitrary mass ok 12 - aromatic default ok 13 - aromatic ok 14 - hydrogens default ok 15 - total_hydrogens default ok 16 - implicit_hydrogens default ok 17 - hydrogens ok 18 - implicit_hydrogens ok 19 - total_hydrogens ok 20 - hydrogens ok 21 - implicit_hydrogens ok 22 - total_hydrogens ok 23 - explicit_valence ok 24 - valence ok 25 - hydrogens ok 26 - implicit_hydrogens ok 27 - total_hydrogens ok 28 - explicit_valence ok 29 - valence ok 30 - hydrogens ok 31 - implicit_hydrogens ok 32 - total_hydrogens ok 33 - explicit_valence ok 34 - valence ok 35 - distance(coords(arrayref)) ok 36 - An object of class 'Math::VectorReal' isa 'Math::VectorReal' ok 37 - distance(coords(vector)) ok 38 - distance(coords(list)) ok 39 - x3 ok 40 - y3 ok 41 - z3 ok 42 - distance(vector) ok 43 - sprintf - %s ok 44 - sprintf - %Z ok 45 - sprintf - %x,%y,%z ok 46 - 1H mass ok 47 - 2H mass number ok 48 - 2H mass ok 49 - 10H mass ok t/Bond.t ............ 1..17 ok 1 - mol atom count ok 2 - mol bond count ok 3 - bond atom count ok 4 - atom bond count ok 5 - atom bond count ok 6 - deleted the bond ok 7 - mol atom count ok 8 - mol bond count ok 9 - bond atom count ok 10 - atom bond count ok 11 - atom bond count ok 12 - readded the bond ok 13 - mol atom count ok 14 - mol bond count ok 15 - bond atom count ok 16 - atom bond count ok 17 - atom bond count ok t/change_id.t ....... 1..5 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - id before ok 3 - id matches before ok 4 - id after ok 5 - id matches after ok t/compat.t .......... 1..1 ok 1 ok t/delete.t .......... 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - bonds before ok 4 - delete bond ok 5 - delete atom obj - bonds ok 6 - delete atom obj - atoms ok 7 - delete atom index - bonds ok 8 - delete atom index - atoms ok t/descriptor.t ...... ok 1 - number_of_atoms == 8 1..1 ok t/Dumper.t .......... 1..6 ok 1 - use Chemistry::File::Dumper; ok 2 - 'read' isa 'Chemistry::Mol' ok 3 - 'read (autodetect)' isa 'Chemistry::Mol' ok 4 - dump and compare ok 5 - write and read and compare ok 6 - deep compare ok t/exception.t ....... skipped: You don't have Test::Exception installed t/File.t ............ 1..15 ok 1 - use Chemistry::File; ok 2 - An object of class 'Chemistry::File' isa 'Chemistry::File' ok 3 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 4 - 'read file' isa 'Chemistry::Mol' ok 5 - atoms ok 6 - 'read string' isa 'Chemistry::Mol' ok 7 - atoms ok 8 - read mollist ok 9 - list name ok 10 - list footer ok 11 - mol name ok 12 - mol price ok 13 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 14 - 'Chemistry::Mol->read' isa 'Chemistry::Mol' ok 15 - atoms ok t/Formula.t ......... 1..18 ok 1 - use Chemistry::File::Formula; ok 2 - 'parse isa mol' isa 'Chemistry::Mol' ok 3 - enough atoms ok 4 - formula format ok 5 - formula hash 1[Ph(Me)3]2 ok 6 - CH3(CH2)3CH3 = C5H12 ok 7 - C6H3Me3 = C9H12 ok 8 - 2Cu[NH3]4(NO3)2 = Cu2H24N12O12 ok 9 - 2C(C[C5]4)3 = C152 ok 10 - 2C(C(C(C)5)4)3 = C152 ok 11 - C 1 0 H 2 2 = C10H22 ok 12 - CH3Br = CH3Br ok 13 - CH3.1Br0.9 = CH4Br ok 14 - 1.5H2O = H3O2 ok 15 - H(CH2)3.5H = C4H9 ok 16 - parse_formula ok 17 - parse_formula (non-integer) ok 18 - formula_sort ok t/geom.t ............ 1..10 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - three atoms ok 3 - angle ok 4 - dihedral ok 5 - zero angle ok 6 - bad angle ok 7 - bad angle ok 8 - linear angle ok 9 - bad dihedral ok 10 - bad dihedral ok t/graph.t ........... 1..12 ok 1 - clone by Clone ok 2 - clone by Storable ok 3 - got 2 things ok 4 - separate: two mols ok 5 - mol 1 is CClH2 ok 6 - mol 2 is CHO2 ok 7 - bond count for a2 equal to a2 (3)? ok 8 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 9 - combine-new; atoms ok 10 - combine-new; bonds ok 11 - combine-new; formula ok 12 - combine-in place ok t/mem.t ............. 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - delete one atom - atoms ok 4 - delete one atom - bonds ok 5 - delete one atom - mols ok 6 - out of scope - atoms ok 7 - out of scope - bonds ok 8 - out of scope - mols ok t/Mol.t ............. 1..20 ok 1 - use Chemistry::Mol; ok 2 - '$mol' isa 'Chemistry::Mol' ok 3 - '$mol' isa 'Chemistry::Obj' ok 4 - '$atom' isa 'Chemistry::Atom' ok 5 - '$atom' isa 'Chemistry::Obj' ok 6 - '$bond' isa 'Chemistry::Bond' ok 7 - '$bond' isa 'Chemistry::Obj' ok 8 - $mol->atoms ok 9 - $mol->atoms(1) eq $atom ok 10 - $mol->by_id ok 11 - $mol->atoms_by_name ok 12 - $mol->bonds ok 13 - $mol->bonds(1) eq $bond ok 14 - $mol->new_atom ok 15 - $mol->mass ok 16 - $mol->mass ok 17 - before sprout_hydrogens ok 18 - after sprout_hydrogens ok 19 - before sprout_hydrogens ok 20 - $bond->length ok t/Obj.t ............. 1..19 ok 1 - use Chemistry::Obj; ok 2 - 'blank obj' isa 'Chemistry::Obj' ok 3 - name ok 4 - joe01 ok 5 - type ok 6 - stringify ok 7 - eq ok 8 - != ok 9 - == ok 10 - ne ok 11 - attr ok 12 - attr list ok 13 - attr list ok 14 - attr hashref ok 15 - attr hashref ok 16 - attr get hashref ok 17 - del_attr ok 18 - accessor ok 19 - chained accessor ok t/pod.t ............. skipped: You don't have Test::Pod installed t/safe_clone.t ...... 1..9 ok 1 - atom(1) before clone ok 2 - bond(1) before clone ok 3 - mol->id before clone ok 4 - atom(1) after clone ok 5 - bond(1) after clone ok 6 - mol->id after clone ok 7 - atom(1) after safe_clone ok 8 - bond(1) after safe_clone ok 9 - mol->id after safe clone ok t/zlib.t ............ 1..6 ok 1 - 'explicit decompressed read' isa 'Chemistry::Mol' ok 2 - has 8 atoms ok 3 - 'implicit decompressed read' isa 'Chemistry::Mol' ok 4 - has 8 atoms ok 5 - compressed ok ok 6 - implicit compression on output ok All tests successful. Files=19, Tests=225, 3 wallclock secs ( 0.09 usr 0.04 sys + 2.26 cusr 0.40 csys = 2.79 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libchemistry-mol-perl/ make -j20 install DESTDIR=/build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' Manifying 8 pod documents Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Mol.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Tutorial.pod Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Bond.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Atom.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Obj.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Dumper.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Formula.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Bond.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Mol.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Formula.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Tutorial.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Atom.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Dumper.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Obj.3pm make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libchemistry-mol-perl' in '../libchemistry-mol-perl_0.39-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2783975 and its subdirectories I: Current time: Fri Nov 22 11:02:23 -12 2024 I: pbuilder-time-stamp: 1732316543 Fri Nov 22 23:02:25 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Fri Nov 22 23:02:25 UTC 2024 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Fri Nov 22 23:02:25 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Fri Nov 22 23:02:25 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-j4sOcd' ==================================================================================== Fri Dec 26 05:25:25 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 libchemistry-mol-perl unstable /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R 0.39-1" as arguments. Fri Dec 26 05:25:25 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-FCVViygC" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Dec 26 05:25:25 UTC 2025 I: Downloading source for unstable/libchemistry-mol-perl=0.39-1 Reading package lists... NOTICE: 'libchemistry-mol-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Please use: git clone https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 48.8 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (dsc) [2326 B] Get:2 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (tar) [44.7 kB] Get:3 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (diff) [1724 B] Fetched 48.8 kB in 0s (3039 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libchemistry-mol-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Please use: git clone https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 48.8 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (dsc) [2326 B] Get:2 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (tar) [44.7 kB] Get:3 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (diff) [1724 B] Fetched 48.8 kB in 0s (3039 kB/s) Download complete and in download only mode ============================================================================= Re-Building libchemistry-mol-perl in unstable on amd64 on ionos15-amd64 now. Date: Fri Dec 26 05:25:25 UTC 2025 Date UTC: Fri Dec 26 05:25:25 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_Hd5X + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' libchemistry-mol-perl = debian-installer -o libchemistry-mol-perl = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' libchemistry-mol-perl = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_Hd5X --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b2 --logfile b2/build.log libchemistry-mol-perl_0.39-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Dec 26 19:25:26 +14 2025 I: pbuilder-time-stamp: 1766726726 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchemistry-mol-perl_0.39-1.dsc] I: copying [./libchemistry-mol-perl_0.39.orig.tar.gz] I: copying [./libchemistry-mol-perl_0.39-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 14 12:28:43 2022 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libchemistry-mol-perl_0.39-1.dsc: no acceptable signature found dpkg-source: info: extracting libchemistry-mol-perl in libchemistry-mol-perl-0.39 dpkg-source: info: unpacking libchemistry-mol-perl_0.39.orig.tar.gz dpkg-source: info: unpacking libchemistry-mol-perl_0.39-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 26 05:25 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=f6acb9243cd74a2995ed4647f6d6b0d3 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1800070 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_Hd5X --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b2 --logfile b2/build.log libchemistry-mol-perl_0.39-1.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libclone-perl, libio-string-perl, libmath-vectorreal-perl, libscalar-list-utils-perl, libtest-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libclone-perl; however: Package libclone-perl is not installed. pbuilder-satisfydepends-dummy depends on libio-string-perl; however: Package libio-string-perl is not installed. pbuilder-satisfydepends-dummy depends on libmath-vectorreal-perl; however: Package libmath-vectorreal-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libclone-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libio-string-perl{a} libmagic-mgc{a} libmagic1t64{a} libmath-vectorreal-perl{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After unpacking 75.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libmath-vectorreal-perl all 1.02-3 [14.8 kB] Fetched 19.9 MB in 2s (9254 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. 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Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../29-libclone-perl_0.47-1+b1_amd64.deb ... Unpacking libclone-perl:amd64 (0.47-1+b1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../30-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libmath-vectorreal-perl. Preparing to unpack .../31-libmath-vectorreal-perl_1.02-3_all.deb ... Unpacking libmath-vectorreal-perl (1.02-3) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libmath-vectorreal-perl (1.02-3) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/libchemistry-mol-perl-0.39/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libchemistry-mol-perl_0.39-1_source.changes dpkg-buildpackage: info: source package libchemistry-mol-perl dpkg-buildpackage: info: source version 0.39-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Chemistry::Mol Writing MYMETA.yml and MYMETA.json dh_auto_build make -j42 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' cp lib/Chemistry/Atom.pm blib/lib/Chemistry/Atom.pm cp lib/Chemistry/File/Formula.pm blib/lib/Chemistry/File/Formula.pm cp lib/Chemistry/File.pm blib/lib/Chemistry/File.pm cp lib/Chemistry/File/Dumper.pm blib/lib/Chemistry/File/Dumper.pm cp lib/Chemistry/Bond.pm blib/lib/Chemistry/Bond.pm cp Tutorial.pod blib/lib/Chemistry/Tutorial.pod cp lib/Chemistry/Obj.pm blib/lib/Chemistry/Obj.pm cp lib/Chemistry/Mol.pm blib/lib/Chemistry/Mol.pm Manifying 8 pod documents make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_auto_test make -j42 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/add_implicit_h.t .. 1..21 ok 1 - _calc_implicit_hydrogens(C 1 0 0) == 3 ok 2 - _calc_implicit_hydrogens(C 4 0 0) == 0 ok 3 - _calc_implicit_hydrogens(C 1 1 0) == 2 ok 4 - _calc_implicit_hydrogens(C 1 -1 0) == 2 ok 5 - _calc_implicit_hydrogens(C 1 0 1) == 1 ok 6 - _calc_implicit_hydrogens(C 1 0 3) == 1 ok 7 - _calc_implicit_hydrogens(C 1 0 2) == 2 ok 8 - _calc_implicit_hydrogens(O 1 -1 0) == 0 ok 9 - _calc_implicit_hydrogens(O 1 1 0) == 2 ok 10 - _calc_implicit_hydrogens(N 4 1 0) == 0 ok 11 - _calc_implicit_hydrogens(N 2 1 0) == 2 ok 12 - _calc_implicit_hydrogens(N 2 -1 0) == 0 ok 13 - _calc_implicit_hydrogens(N 1 0 3) == 0 ok 14 - _calc_implicit_hydrogens(B 1 -1 0) == 3 ok 15 - _calc_implicit_hydrogens(Cl 0 -1 0) == 0 ok 16 - _calc_implicit_hydrogens(Cl 0 0 0) == 1 ok 17 - _calc_implicit_hydrogens(Cl 0 0 2) == 0 ok 18 - _calc_implicit_hydrogens(Cl 0 1 0) == 1 ok 19 - C==1 ok 20 - O==0 ok 21 - N==2 ok t/Atom.t ............ 1..49 ok 1 - use Chemistry::Atom; ok 2 - use Chemistry::Mol; ok 3 - use Math::VectorReal; ok 4 - 'blank atom' isa 'Chemistry::Atom' ok 5 - 'blank atom' isa 'Chemistry::Obj' ok 6 - symbol -> symbol ok 7 - symbol -> Z ok 8 - Z -> Z ok 9 - Z -> symbol ok 10 - default mass ok 11 - arbitrary mass ok 12 - aromatic default ok 13 - aromatic ok 14 - hydrogens default ok 15 - total_hydrogens default ok 16 - implicit_hydrogens default ok 17 - hydrogens ok 18 - implicit_hydrogens ok 19 - total_hydrogens ok 20 - hydrogens ok 21 - implicit_hydrogens ok 22 - total_hydrogens ok 23 - explicit_valence ok 24 - valence ok 25 - hydrogens ok 26 - implicit_hydrogens ok 27 - total_hydrogens ok 28 - explicit_valence ok 29 - valence ok 30 - hydrogens ok 31 - implicit_hydrogens ok 32 - total_hydrogens ok 33 - explicit_valence ok 34 - valence ok 35 - distance(coords(arrayref)) ok 36 - An object of class 'Math::VectorReal' isa 'Math::VectorReal' ok 37 - distance(coords(vector)) ok 38 - distance(coords(list)) ok 39 - x3 ok 40 - y3 ok 41 - z3 ok 42 - distance(vector) ok 43 - sprintf - %s ok 44 - sprintf - %Z ok 45 - sprintf - %x,%y,%z ok 46 - 1H mass ok 47 - 2H mass number ok 48 - 2H mass ok 49 - 10H mass ok t/Bond.t ............ 1..17 ok 1 - mol atom count ok 2 - mol bond count ok 3 - bond atom count ok 4 - atom bond count ok 5 - atom bond count ok 6 - deleted the bond ok 7 - mol atom count ok 8 - mol bond count ok 9 - bond atom count ok 10 - atom bond count ok 11 - atom bond count ok 12 - readded the bond ok 13 - mol atom count ok 14 - mol bond count ok 15 - bond atom count ok 16 - atom bond count ok 17 - atom bond count ok t/change_id.t ....... 1..5 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - id before ok 3 - id matches before ok 4 - id after ok 5 - id matches after ok t/compat.t .......... 1..1 ok 1 ok t/delete.t .......... 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - bonds before ok 4 - delete bond ok 5 - delete atom obj - bonds ok 6 - delete atom obj - atoms ok 7 - delete atom index - bonds ok 8 - delete atom index - atoms ok t/descriptor.t ...... ok 1 - number_of_atoms == 8 1..1 ok t/Dumper.t .......... 1..6 ok 1 - use Chemistry::File::Dumper; ok 2 - 'read' isa 'Chemistry::Mol' ok 3 - 'read (autodetect)' isa 'Chemistry::Mol' ok 4 - dump and compare ok 5 - write and read and compare ok 6 - deep compare ok t/exception.t ....... skipped: You don't have Test::Exception installed t/File.t ............ 1..15 ok 1 - use Chemistry::File; ok 2 - An object of class 'Chemistry::File' isa 'Chemistry::File' ok 3 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 4 - 'read file' isa 'Chemistry::Mol' ok 5 - atoms ok 6 - 'read string' isa 'Chemistry::Mol' ok 7 - atoms ok 8 - read mollist ok 9 - list name ok 10 - list footer ok 11 - mol name ok 12 - mol price ok 13 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 14 - 'Chemistry::Mol->read' isa 'Chemistry::Mol' ok 15 - atoms ok t/Formula.t ......... 1..18 ok 1 - use Chemistry::File::Formula; ok 2 - 'parse isa mol' isa 'Chemistry::Mol' ok 3 - enough atoms ok 4 - formula format ok 5 - formula hash 1[Ph(Me)3]2 ok 6 - CH3(CH2)3CH3 = C5H12 ok 7 - C6H3Me3 = C9H12 ok 8 - 2Cu[NH3]4(NO3)2 = Cu2H24N12O12 ok 9 - 2C(C[C5]4)3 = C152 ok 10 - 2C(C(C(C)5)4)3 = C152 ok 11 - C 1 0 H 2 2 = C10H22 ok 12 - CH3Br = CH3Br ok 13 - CH3.1Br0.9 = CH4Br ok 14 - 1.5H2O = H3O2 ok 15 - H(CH2)3.5H = C4H9 ok 16 - parse_formula ok 17 - parse_formula (non-integer) ok 18 - formula_sort ok t/geom.t ............ 1..10 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - three atoms ok 3 - angle ok 4 - dihedral ok 5 - zero angle ok 6 - bad angle ok 7 - bad angle ok 8 - linear angle ok 9 - bad dihedral ok 10 - bad dihedral ok t/graph.t ........... 1..12 ok 1 - clone by Clone ok 2 - clone by Storable ok 3 - got 2 things ok 4 - separate: two mols ok 5 - mol 1 is CClH2 ok 6 - mol 2 is CHO2 ok 7 - bond count for a2 equal to a2 (3)? ok 8 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 9 - combine-new; atoms ok 10 - combine-new; bonds ok 11 - combine-new; formula ok 12 - combine-in place ok t/mem.t ............. 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - delete one atom - atoms ok 4 - delete one atom - bonds ok 5 - delete one atom - mols ok 6 - out of scope - atoms ok 7 - out of scope - bonds ok 8 - out of scope - mols ok t/Mol.t ............. 1..20 ok 1 - use Chemistry::Mol; ok 2 - '$mol' isa 'Chemistry::Mol' ok 3 - '$mol' isa 'Chemistry::Obj' ok 4 - '$atom' isa 'Chemistry::Atom' ok 5 - '$atom' isa 'Chemistry::Obj' ok 6 - '$bond' isa 'Chemistry::Bond' ok 7 - '$bond' isa 'Chemistry::Obj' ok 8 - $mol->atoms ok 9 - $mol->atoms(1) eq $atom ok 10 - $mol->by_id ok 11 - $mol->atoms_by_name ok 12 - $mol->bonds ok 13 - $mol->bonds(1) eq $bond ok 14 - $mol->new_atom ok 15 - $mol->mass ok 16 - $mol->mass ok 17 - before sprout_hydrogens ok 18 - after sprout_hydrogens ok 19 - before sprout_hydrogens ok 20 - $bond->length ok t/Obj.t ............. 1..19 ok 1 - use Chemistry::Obj; ok 2 - 'blank obj' isa 'Chemistry::Obj' ok 3 - name ok 4 - joe01 ok 5 - type ok 6 - stringify ok 7 - eq ok 8 - != ok 9 - == ok 10 - ne ok 11 - attr ok 12 - attr list ok 13 - attr list ok 14 - attr hashref ok 15 - attr hashref ok 16 - attr get hashref ok 17 - del_attr ok 18 - accessor ok 19 - chained accessor ok t/pod.t ............. skipped: You don't have Test::Pod installed t/safe_clone.t ...... 1..9 ok 1 - atom(1) before clone ok 2 - bond(1) before clone ok 3 - mol->id before clone ok 4 - atom(1) after clone ok 5 - bond(1) after clone ok 6 - mol->id after clone ok 7 - atom(1) after safe_clone ok 8 - bond(1) after safe_clone ok 9 - mol->id after safe clone ok t/zlib.t ............ 1..6 ok 1 - 'explicit decompressed read' isa 'Chemistry::Mol' ok 2 - has 8 atoms ok 3 - 'implicit decompressed read' isa 'Chemistry::Mol' ok 4 - has 8 atoms ok 5 - compressed ok ok 6 - implicit compression on output ok All tests successful. Files=19, Tests=225, 2 wallclock secs ( 0.07 usr 0.04 sys + 1.56 cusr 0.25 csys = 1.92 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libchemistry-mol-perl/ make -j42 install DESTDIR=/build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' Manifying 8 pod documents Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Mol.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Obj.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Tutorial.pod Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Bond.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Atom.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Dumper.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Formula.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Atom.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Dumper.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Formula.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Obj.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Bond.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Mol.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Tutorial.3pm make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libchemistry-mol-perl' in '../libchemistry-mol-perl_0.39-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1800070/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1800070 and its subdirectories I: Current time: Fri Dec 26 19:26:13 +14 2025 I: pbuilder-time-stamp: 1766726773 + false + set +x Fri Dec 26 05:26:13 UTC 2025 I: Signing ./b2/libchemistry-mol-perl_0.39-1_amd64.buildinfo as libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc Fri Dec 26 05:26:13 UTC 2025 I: Signed ./b2/libchemistry-mol-perl_0.39-1_amd64.buildinfo as ./b2/libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc Fri Dec 26 05:26:13 UTC 2025 - build #2 for libchemistry-mol-perl/unstable/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Fri Dec 26 05:26:13 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-FCVViygC, removing. /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R: total 48 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 23:02 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 23:03 b2 -rw-r--r-- 1 jenkins jenkins 2326 Jul 14 2022 libchemistry-mol-perl_0.39-1.dsc -rw------- 1 jenkins jenkins 33937 Nov 22 23:02 rbuildlog.AOt3Skt /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1: total 176 -rw-r--r-- 1 jenkins jenkins 30127 Nov 22 23:02 build.log -rw-r--r-- 1 jenkins jenkins 1724 Nov 22 23:02 libchemistry-mol-perl_0.39-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2326 Nov 22 23:02 libchemistry-mol-perl_0.39-1.dsc -rw-r--r-- 1 jenkins jenkins 63184 Nov 22 23:02 libchemistry-mol-perl_0.39-1_all.deb -rw-r--r-- 1 jenkins jenkins 4831 Nov 22 23:02 libchemistry-mol-perl_0.39-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5713 Nov 22 23:02 libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1188 Nov 22 23:02 libchemistry-mol-perl_0.39-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1675 Nov 22 23:02 libchemistry-mol-perl_0.39-1_source.changes -rw-r--r-- 1 jenkins jenkins 44747 Nov 22 23:02 libchemistry-mol-perl_0.39.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b2: total 172 -rw-r--r-- 1 jenkins jenkins 32071 Nov 22 23:03 build.log -rw-r--r-- 1 jenkins jenkins 1724 Nov 22 23:03 libchemistry-mol-perl_0.39-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2326 Nov 22 23:03 libchemistry-mol-perl_0.39-1.dsc -rw-r--r-- 1 jenkins jenkins 63184 Nov 22 23:03 libchemistry-mol-perl_0.39-1_all.deb -rw-r--r-- 1 jenkins jenkins 4840 Nov 22 23:03 libchemistry-mol-perl_0.39-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5722 Nov 22 23:03 libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1188 Nov 22 23:03 libchemistry-mol-perl_0.39-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1675 Nov 22 23:03 libchemistry-mol-perl_0.39-1_source.changes -rw-r--r-- 1 jenkins jenkins 44747 Nov 22 23:03 libchemistry-mol-perl_0.39.orig.tar.gz Fri Nov 22 23:03:14 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Fri Nov 22 23:03:15 UTC 2024 I: libchemistry-mol-perl_0.39-1_amd64.changes: Format: 1.8 Date: Thu, 14 Jul 2022 08:18:29 -0400 Source: libchemistry-mol-perl Binary: libchemistry-mol-perl Architecture: all Version: 0.39-1 Distribution: unstable Urgency: medium Maintainer: Debian Perl Group Changed-By: Andrius Merkys Description: libchemistry-mol-perl - Molecule object toolkit Changes: libchemistry-mol-perl (0.39-1) unstable; urgency=medium . * New upstream version 0.39 * Bump copyright years. * Add libclone-perl to test dependencies and Recommends. Checksums-Sha1: 80c01e96dc9fca41478ee85f8eab39e8a783fe7a 63184 libchemistry-mol-perl_0.39-1_all.deb d25ed9842dba4f134bc5319a1c5d882221cc0116 4831 libchemistry-mol-perl_0.39-1_amd64.buildinfo Checksums-Sha256: 7cd9271a9d402e264bbf0e555806e283c55075b460ce584345f08b36a842c4a5 63184 libchemistry-mol-perl_0.39-1_all.deb 7379680d49b867fbd63245b761ea390e27f1280e423aaf787a26ad834902ac39 4831 libchemistry-mol-perl_0.39-1_amd64.buildinfo Files: 796a88a5877c2fc8c2150386cde2bd33 63184 perl optional libchemistry-mol-perl_0.39-1_all.deb e0ee1e882c8fb866ccb86c35b6f15db7 4831 perl optional libchemistry-mol-perl_0.39-1_amd64.buildinfo 6c6 < base-files (= 13.5), --- > base-files (= 13.6), ============================================================================= Fri Nov 22 23:03:15 UTC 2024 - The installed build depends vary according to the two .buildinfo files, probably due to mirror updates. Doing the first build on ionos1-amd64.debian.net again. ============================================================================= Fri Nov 22 23:03:15 UTC 2024 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Fri Nov 22 23:03:15 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Nov 22 23:03:15 UTC 2024 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-0XJdu1' ==================================================================================== Fri Nov 22 23:03:16 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "1 libchemistry-mol-perl unstable /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R 0.39-1" as arguments. Fri Nov 22 23:03:16 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-mRJ1FHYv" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 23:03:16 UTC 2024 I: Downloading source for unstable/libchemistry-mol-perl=0.39-1 Reading package lists... NOTICE: 'libchemistry-mol-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Please use: git clone https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 48.8 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (dsc) [2326 B] Get:2 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (tar) [44.7 kB] Get:3 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (diff) [1724 B] Fetched 48.8 kB in 0s (2025 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libchemistry-mol-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git Please use: git clone https://salsa.debian.org/perl-team/modules/packages/libchemistry-mol-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 48.8 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (dsc) [2326 B] Get:2 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (tar) [44.7 kB] Get:3 http://deb.debian.org/debian unstable/main libchemistry-mol-perl 0.39-1 (diff) [1724 B] Fetched 48.8 kB in 0s (2025 kB/s) Download complete and in download only mode ============================================================================= Building libchemistry-mol-perl in unstable on amd64 on ionos1-amd64 now. Date: Fri Nov 22 23:03:17 UTC 2024 Date UTC: Fri Nov 22 23:03:17 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 11:03:17 -12 2024 I: pbuilder-time-stamp: 1732316597 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchemistry-mol-perl_0.39-1.dsc] I: copying [./libchemistry-mol-perl_0.39.orig.tar.gz] I: copying [./libchemistry-mol-perl_0.39-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 14 12:28:43 2022 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libchemistry-mol-perl_0.39-1.dsc: no acceptable signature found dpkg-source: info: extracting libchemistry-mol-perl in libchemistry-mol-perl-0.39 dpkg-source: info: unpacking libchemistry-mol-perl_0.39.orig.tar.gz dpkg-source: info: unpacking libchemistry-mol-perl_0.39-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2804521/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='93bddc4ea68b4c0692295feba10aca62' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2804521' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_QgHt --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1 --logfile b1/build.log libchemistry-mol-perl_0.39-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2804521/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libclone-perl, libio-string-perl, libmath-vectorreal-perl, libscalar-list-utils-perl, libtest-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libclone-perl; however: Package libclone-perl is not installed. pbuilder-satisfydepends-dummy depends on libio-string-perl; however: Package libio-string-perl is not installed. pbuilder-satisfydepends-dummy depends on libmath-vectorreal-perl; however: Package libmath-vectorreal-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libclone-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libio-string-perl{a} libmagic-mgc{a} libmagic1t64{a} libmath-vectorreal-perl{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After unpacking 75.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libmath-vectorreal-perl all 1.02-3 [14.8 kB] Fetched 19.9 MB in 0s (62.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. 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Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libchemistry-mol-perl-0.39/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libchemistry-mol-perl_0.39-1_source.changes dpkg-buildpackage: info: source package libchemistry-mol-perl dpkg-buildpackage: info: source version 0.39-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Chemistry::Mol Writing MYMETA.yml and MYMETA.json dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' cp Tutorial.pod blib/lib/Chemistry/Tutorial.pod cp lib/Chemistry/Mol.pm blib/lib/Chemistry/Mol.pm cp lib/Chemistry/File.pm blib/lib/Chemistry/File.pm cp lib/Chemistry/File/Formula.pm blib/lib/Chemistry/File/Formula.pm cp lib/Chemistry/Atom.pm blib/lib/Chemistry/Atom.pm cp lib/Chemistry/Bond.pm blib/lib/Chemistry/Bond.pm cp lib/Chemistry/File/Dumper.pm blib/lib/Chemistry/File/Dumper.pm cp lib/Chemistry/Obj.pm blib/lib/Chemistry/Obj.pm Manifying 8 pod documents make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_auto_test make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/add_implicit_h.t .. 1..21 ok 1 - _calc_implicit_hydrogens(C 1 0 0) == 3 ok 2 - _calc_implicit_hydrogens(C 4 0 0) == 0 ok 3 - _calc_implicit_hydrogens(C 1 1 0) == 2 ok 4 - _calc_implicit_hydrogens(C 1 -1 0) == 2 ok 5 - _calc_implicit_hydrogens(C 1 0 1) == 1 ok 6 - _calc_implicit_hydrogens(C 1 0 3) == 1 ok 7 - _calc_implicit_hydrogens(C 1 0 2) == 2 ok 8 - _calc_implicit_hydrogens(O 1 -1 0) == 0 ok 9 - _calc_implicit_hydrogens(O 1 1 0) == 2 ok 10 - _calc_implicit_hydrogens(N 4 1 0) == 0 ok 11 - _calc_implicit_hydrogens(N 2 1 0) == 2 ok 12 - _calc_implicit_hydrogens(N 2 -1 0) == 0 ok 13 - _calc_implicit_hydrogens(N 1 0 3) == 0 ok 14 - _calc_implicit_hydrogens(B 1 -1 0) == 3 ok 15 - _calc_implicit_hydrogens(Cl 0 -1 0) == 0 ok 16 - _calc_implicit_hydrogens(Cl 0 0 0) == 1 ok 17 - _calc_implicit_hydrogens(Cl 0 0 2) == 0 ok 18 - _calc_implicit_hydrogens(Cl 0 1 0) == 1 ok 19 - C==1 ok 20 - O==0 ok 21 - N==2 ok t/Atom.t ............ 1..49 ok 1 - use Chemistry::Atom; ok 2 - use Chemistry::Mol; ok 3 - use Math::VectorReal; ok 4 - 'blank atom' isa 'Chemistry::Atom' ok 5 - 'blank atom' isa 'Chemistry::Obj' ok 6 - symbol -> symbol ok 7 - symbol -> Z ok 8 - Z -> Z ok 9 - Z -> symbol ok 10 - default mass ok 11 - arbitrary mass ok 12 - aromatic default ok 13 - aromatic ok 14 - hydrogens default ok 15 - total_hydrogens default ok 16 - implicit_hydrogens default ok 17 - hydrogens ok 18 - implicit_hydrogens ok 19 - total_hydrogens ok 20 - hydrogens ok 21 - implicit_hydrogens ok 22 - total_hydrogens ok 23 - explicit_valence ok 24 - valence ok 25 - hydrogens ok 26 - implicit_hydrogens ok 27 - total_hydrogens ok 28 - explicit_valence ok 29 - valence ok 30 - hydrogens ok 31 - implicit_hydrogens ok 32 - total_hydrogens ok 33 - explicit_valence ok 34 - valence ok 35 - distance(coords(arrayref)) ok 36 - An object of class 'Math::VectorReal' isa 'Math::VectorReal' ok 37 - distance(coords(vector)) ok 38 - distance(coords(list)) ok 39 - x3 ok 40 - y3 ok 41 - z3 ok 42 - distance(vector) ok 43 - sprintf - %s ok 44 - sprintf - %Z ok 45 - sprintf - %x,%y,%z ok 46 - 1H mass ok 47 - 2H mass number ok 48 - 2H mass ok 49 - 10H mass ok t/Bond.t ............ 1..17 ok 1 - mol atom count ok 2 - mol bond count ok 3 - bond atom count ok 4 - atom bond count ok 5 - atom bond count ok 6 - deleted the bond ok 7 - mol atom count ok 8 - mol bond count ok 9 - bond atom count ok 10 - atom bond count ok 11 - atom bond count ok 12 - readded the bond ok 13 - mol atom count ok 14 - mol bond count ok 15 - bond atom count ok 16 - atom bond count ok 17 - atom bond count ok t/change_id.t ....... 1..5 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - id before ok 3 - id matches before ok 4 - id after ok 5 - id matches after ok t/compat.t .......... 1..1 ok 1 ok t/delete.t .......... 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - bonds before ok 4 - delete bond ok 5 - delete atom obj - bonds ok 6 - delete atom obj - atoms ok 7 - delete atom index - bonds ok 8 - delete atom index - atoms ok t/descriptor.t ...... ok 1 - number_of_atoms == 8 1..1 ok t/Dumper.t .......... 1..6 ok 1 - use Chemistry::File::Dumper; ok 2 - 'read' isa 'Chemistry::Mol' ok 3 - 'read (autodetect)' isa 'Chemistry::Mol' ok 4 - dump and compare ok 5 - write and read and compare ok 6 - deep compare ok t/exception.t ....... skipped: You don't have Test::Exception installed t/File.t ............ 1..15 ok 1 - use Chemistry::File; ok 2 - An object of class 'Chemistry::File' isa 'Chemistry::File' ok 3 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 4 - 'read file' isa 'Chemistry::Mol' ok 5 - atoms ok 6 - 'read string' isa 'Chemistry::Mol' ok 7 - atoms ok 8 - read mollist ok 9 - list name ok 10 - list footer ok 11 - mol name ok 12 - mol price ok 13 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 14 - 'Chemistry::Mol->read' isa 'Chemistry::Mol' ok 15 - atoms ok t/Formula.t ......... 1..18 ok 1 - use Chemistry::File::Formula; ok 2 - 'parse isa mol' isa 'Chemistry::Mol' ok 3 - enough atoms ok 4 - formula format ok 5 - formula hash 1[Ph(Me)3]2 ok 6 - CH3(CH2)3CH3 = C5H12 ok 7 - C6H3Me3 = C9H12 ok 8 - 2Cu[NH3]4(NO3)2 = Cu2H24N12O12 ok 9 - 2C(C[C5]4)3 = C152 ok 10 - 2C(C(C(C)5)4)3 = C152 ok 11 - C 1 0 H 2 2 = C10H22 ok 12 - CH3Br = CH3Br ok 13 - CH3.1Br0.9 = CH4Br ok 14 - 1.5H2O = H3O2 ok 15 - H(CH2)3.5H = C4H9 ok 16 - parse_formula ok 17 - parse_formula (non-integer) ok 18 - formula_sort ok t/geom.t ............ 1..10 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - three atoms ok 3 - angle ok 4 - dihedral ok 5 - zero angle ok 6 - bad angle ok 7 - bad angle ok 8 - linear angle ok 9 - bad dihedral ok 10 - bad dihedral ok t/graph.t ........... 1..12 ok 1 - clone by Clone ok 2 - clone by Storable ok 3 - got 2 things ok 4 - separate: two mols ok 5 - mol 1 is CClH2 ok 6 - mol 2 is CHO2 ok 7 - bond count for a2 equal to a2 (3)? ok 8 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 9 - combine-new; atoms ok 10 - combine-new; bonds ok 11 - combine-new; formula ok 12 - combine-in place ok t/mem.t ............. 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - delete one atom - atoms ok 4 - delete one atom - bonds ok 5 - delete one atom - mols ok 6 - out of scope - atoms ok 7 - out of scope - bonds ok 8 - out of scope - mols ok t/Mol.t ............. 1..20 ok 1 - use Chemistry::Mol; ok 2 - '$mol' isa 'Chemistry::Mol' ok 3 - '$mol' isa 'Chemistry::Obj' ok 4 - '$atom' isa 'Chemistry::Atom' ok 5 - '$atom' isa 'Chemistry::Obj' ok 6 - '$bond' isa 'Chemistry::Bond' ok 7 - '$bond' isa 'Chemistry::Obj' ok 8 - $mol->atoms ok 9 - $mol->atoms(1) eq $atom ok 10 - $mol->by_id ok 11 - $mol->atoms_by_name ok 12 - $mol->bonds ok 13 - $mol->bonds(1) eq $bond ok 14 - $mol->new_atom ok 15 - $mol->mass ok 16 - $mol->mass ok 17 - before sprout_hydrogens ok 18 - after sprout_hydrogens ok 19 - before sprout_hydrogens ok 20 - $bond->length ok t/Obj.t ............. 1..19 ok 1 - use Chemistry::Obj; ok 2 - 'blank obj' isa 'Chemistry::Obj' ok 3 - name ok 4 - joe01 ok 5 - type ok 6 - stringify ok 7 - eq ok 8 - != ok 9 - == ok 10 - ne ok 11 - attr ok 12 - attr list ok 13 - attr list ok 14 - attr hashref ok 15 - attr hashref ok 16 - attr get hashref ok 17 - del_attr ok 18 - accessor ok 19 - chained accessor ok t/pod.t ............. skipped: You don't have Test::Pod installed t/safe_clone.t ...... 1..9 ok 1 - atom(1) before clone ok 2 - bond(1) before clone ok 3 - mol->id before clone ok 4 - atom(1) after clone ok 5 - bond(1) after clone ok 6 - mol->id after clone ok 7 - atom(1) after safe_clone ok 8 - bond(1) after safe_clone ok 9 - mol->id after safe clone ok t/zlib.t ............ 1..6 ok 1 - 'explicit decompressed read' isa 'Chemistry::Mol' ok 2 - has 8 atoms ok 3 - 'implicit decompressed read' isa 'Chemistry::Mol' ok 4 - has 8 atoms ok 5 - compressed ok ok 6 - implicit compression on output ok All tests successful. Files=19, Tests=225, 3 wallclock secs ( 0.11 usr 0.03 sys + 2.46 cusr 0.49 csys = 3.09 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libchemistry-mol-perl/ make -j20 install DESTDIR=/build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' Manifying 8 pod documents Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Mol.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Tutorial.pod Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Bond.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Atom.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Obj.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Dumper.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Formula.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Bond.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Mol.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Formula.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Tutorial.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Atom.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Dumper.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Obj.3pm make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libchemistry-mol-perl' in '../libchemistry-mol-perl_0.39-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2804521 and its subdirectories I: Current time: Fri Nov 22 11:04:03 -12 2024 I: pbuilder-time-stamp: 1732316643 Fri Nov 22 23:04:03 UTC 2024 I: Signing ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo as libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc Fri Nov 22 23:04:03 UTC 2024 I: Signed ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo as ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc Fri Nov 22 23:04:03 UTC 2024 - build #1 for libchemistry-mol-perl/unstable/amd64 on ionos1-amd64 done. Starting cleanup. All cleanup done. Fri Nov 22 23:04:03 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-mRJ1FHYv, removing. /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R: total 56 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 23:04 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 23:03 b2 -rw-r--r-- 1 jenkins jenkins 2326 Jul 14 2022 libchemistry-mol-perl_0.39-1.dsc -rw------- 1 jenkins jenkins 35375 Nov 22 23:03 rbuildlog.AOt3Skt -rw------- 1 jenkins jenkins 3955 Nov 22 23:03 tmp.8LbRsTWJ38 -rw------- 1 jenkins jenkins 3955 Nov 22 23:03 tmp.nAU8YtJZer /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1: total 176 -rw-r--r-- 1 jenkins jenkins 30127 Nov 22 23:04 build.log -rw-r--r-- 1 jenkins jenkins 1724 Nov 22 23:04 libchemistry-mol-perl_0.39-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2326 Nov 22 23:04 libchemistry-mol-perl_0.39-1.dsc -rw-r--r-- 1 jenkins jenkins 63184 Nov 22 23:04 libchemistry-mol-perl_0.39-1_all.deb -rw-r--r-- 1 jenkins jenkins 4831 Nov 22 23:04 libchemistry-mol-perl_0.39-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5713 Nov 22 23:04 libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1188 Nov 22 23:04 libchemistry-mol-perl_0.39-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1675 Nov 22 23:04 libchemistry-mol-perl_0.39-1_source.changes -rw-r--r-- 1 jenkins jenkins 44747 Nov 22 23:04 libchemistry-mol-perl_0.39.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b2: total 176 -rw-r--r-- 1 jenkins jenkins 32071 Nov 22 23:03 build.log -rw-r--r-- 1 jenkins jenkins 1724 Nov 22 23:03 libchemistry-mol-perl_0.39-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2326 Nov 22 23:03 libchemistry-mol-perl_0.39-1.dsc -rw-r--r-- 1 jenkins jenkins 63184 Nov 22 23:03 libchemistry-mol-perl_0.39-1_all.deb -rw-r--r-- 1 jenkins jenkins 4840 Nov 22 23:03 libchemistry-mol-perl_0.39-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5722 Nov 22 23:03 libchemistry-mol-perl_0.39-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1188 Nov 22 23:03 libchemistry-mol-perl_0.39-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1675 Nov 22 23:03 libchemistry-mol-perl_0.39-1_source.changes -rw-r--r-- 1 jenkins jenkins 44747 Nov 22 23:03 libchemistry-mol-perl_0.39.orig.tar.gz Fri Nov 22 23:04:04 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 11:03:17 -12 2024 I: pbuilder-time-stamp: 1732316597 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchemistry-mol-perl_0.39-1.dsc] I: copying [./libchemistry-mol-perl_0.39.orig.tar.gz] I: copying [./libchemistry-mol-perl_0.39-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 14 12:28:43 2022 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libchemistry-mol-perl_0.39-1.dsc: no acceptable signature found dpkg-source: info: extracting libchemistry-mol-perl in libchemistry-mol-perl-0.39 dpkg-source: info: unpacking libchemistry-mol-perl_0.39.orig.tar.gz dpkg-source: info: unpacking libchemistry-mol-perl_0.39-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2804521/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='93bddc4ea68b4c0692295feba10aca62' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2804521' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/pbuilderrc_QgHt --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/b1 --logfile b1/build.log libchemistry-mol-perl_0.39-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2804521/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libclone-perl, libio-string-perl, libmath-vectorreal-perl, libscalar-list-utils-perl, libtest-simple-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libclone-perl; however: Package libclone-perl is not installed. pbuilder-satisfydepends-dummy depends on libio-string-perl; however: Package libio-string-perl is not installed. pbuilder-satisfydepends-dummy depends on libmath-vectorreal-perl; however: Package libmath-vectorreal-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libclone-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libio-string-perl{a} libmagic-mgc{a} libmagic1t64{a} libmath-vectorreal-perl{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After unpacking 75.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libmath-vectorreal-perl all 1.02-3 [14.8 kB] Fetched 19.9 MB in 0s (62.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... 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Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libmath-vectorreal-perl (1.02-3) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libchemistry-mol-perl-0.39/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libchemistry-mol-perl_0.39-1_source.changes dpkg-buildpackage: info: source package libchemistry-mol-perl dpkg-buildpackage: info: source version 0.39-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libchemistry-mol-perl-0.39=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Chemistry::Mol Writing MYMETA.yml and MYMETA.json dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' cp Tutorial.pod blib/lib/Chemistry/Tutorial.pod cp lib/Chemistry/Mol.pm blib/lib/Chemistry/Mol.pm cp lib/Chemistry/File.pm blib/lib/Chemistry/File.pm cp lib/Chemistry/File/Formula.pm blib/lib/Chemistry/File/Formula.pm cp lib/Chemistry/Atom.pm blib/lib/Chemistry/Atom.pm cp lib/Chemistry/Bond.pm blib/lib/Chemistry/Bond.pm cp lib/Chemistry/File/Dumper.pm blib/lib/Chemistry/File/Dumper.pm cp lib/Chemistry/Obj.pm blib/lib/Chemistry/Obj.pm Manifying 8 pod documents make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_auto_test make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/add_implicit_h.t .. 1..21 ok 1 - _calc_implicit_hydrogens(C 1 0 0) == 3 ok 2 - _calc_implicit_hydrogens(C 4 0 0) == 0 ok 3 - _calc_implicit_hydrogens(C 1 1 0) == 2 ok 4 - _calc_implicit_hydrogens(C 1 -1 0) == 2 ok 5 - _calc_implicit_hydrogens(C 1 0 1) == 1 ok 6 - _calc_implicit_hydrogens(C 1 0 3) == 1 ok 7 - _calc_implicit_hydrogens(C 1 0 2) == 2 ok 8 - _calc_implicit_hydrogens(O 1 -1 0) == 0 ok 9 - _calc_implicit_hydrogens(O 1 1 0) == 2 ok 10 - _calc_implicit_hydrogens(N 4 1 0) == 0 ok 11 - _calc_implicit_hydrogens(N 2 1 0) == 2 ok 12 - _calc_implicit_hydrogens(N 2 -1 0) == 0 ok 13 - _calc_implicit_hydrogens(N 1 0 3) == 0 ok 14 - _calc_implicit_hydrogens(B 1 -1 0) == 3 ok 15 - _calc_implicit_hydrogens(Cl 0 -1 0) == 0 ok 16 - _calc_implicit_hydrogens(Cl 0 0 0) == 1 ok 17 - _calc_implicit_hydrogens(Cl 0 0 2) == 0 ok 18 - _calc_implicit_hydrogens(Cl 0 1 0) == 1 ok 19 - C==1 ok 20 - O==0 ok 21 - N==2 ok t/Atom.t ............ 1..49 ok 1 - use Chemistry::Atom; ok 2 - use Chemistry::Mol; ok 3 - use Math::VectorReal; ok 4 - 'blank atom' isa 'Chemistry::Atom' ok 5 - 'blank atom' isa 'Chemistry::Obj' ok 6 - symbol -> symbol ok 7 - symbol -> Z ok 8 - Z -> Z ok 9 - Z -> symbol ok 10 - default mass ok 11 - arbitrary mass ok 12 - aromatic default ok 13 - aromatic ok 14 - hydrogens default ok 15 - total_hydrogens default ok 16 - implicit_hydrogens default ok 17 - hydrogens ok 18 - implicit_hydrogens ok 19 - total_hydrogens ok 20 - hydrogens ok 21 - implicit_hydrogens ok 22 - total_hydrogens ok 23 - explicit_valence ok 24 - valence ok 25 - hydrogens ok 26 - implicit_hydrogens ok 27 - total_hydrogens ok 28 - explicit_valence ok 29 - valence ok 30 - hydrogens ok 31 - implicit_hydrogens ok 32 - total_hydrogens ok 33 - explicit_valence ok 34 - valence ok 35 - distance(coords(arrayref)) ok 36 - An object of class 'Math::VectorReal' isa 'Math::VectorReal' ok 37 - distance(coords(vector)) ok 38 - distance(coords(list)) ok 39 - x3 ok 40 - y3 ok 41 - z3 ok 42 - distance(vector) ok 43 - sprintf - %s ok 44 - sprintf - %Z ok 45 - sprintf - %x,%y,%z ok 46 - 1H mass ok 47 - 2H mass number ok 48 - 2H mass ok 49 - 10H mass ok t/Bond.t ............ 1..17 ok 1 - mol atom count ok 2 - mol bond count ok 3 - bond atom count ok 4 - atom bond count ok 5 - atom bond count ok 6 - deleted the bond ok 7 - mol atom count ok 8 - mol bond count ok 9 - bond atom count ok 10 - atom bond count ok 11 - atom bond count ok 12 - readded the bond ok 13 - mol atom count ok 14 - mol bond count ok 15 - bond atom count ok 16 - atom bond count ok 17 - atom bond count ok t/change_id.t ....... 1..5 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - id before ok 3 - id matches before ok 4 - id after ok 5 - id matches after ok t/compat.t .......... 1..1 ok 1 ok t/delete.t .......... 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - bonds before ok 4 - delete bond ok 5 - delete atom obj - bonds ok 6 - delete atom obj - atoms ok 7 - delete atom index - bonds ok 8 - delete atom index - atoms ok t/descriptor.t ...... ok 1 - number_of_atoms == 8 1..1 ok t/Dumper.t .......... 1..6 ok 1 - use Chemistry::File::Dumper; ok 2 - 'read' isa 'Chemistry::Mol' ok 3 - 'read (autodetect)' isa 'Chemistry::Mol' ok 4 - dump and compare ok 5 - write and read and compare ok 6 - deep compare ok t/exception.t ....... skipped: You don't have Test::Exception installed t/File.t ............ 1..15 ok 1 - use Chemistry::File; ok 2 - An object of class 'Chemistry::File' isa 'Chemistry::File' ok 3 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 4 - 'read file' isa 'Chemistry::Mol' ok 5 - atoms ok 6 - 'read string' isa 'Chemistry::Mol' ok 7 - atoms ok 8 - read mollist ok 9 - list name ok 10 - list footer ok 11 - mol name ok 12 - mol price ok 13 - An object of class 'Chemistry::File::Dumper' isa 'Chemistry::File::Dumper' ok 14 - 'Chemistry::Mol->read' isa 'Chemistry::Mol' ok 15 - atoms ok t/Formula.t ......... 1..18 ok 1 - use Chemistry::File::Formula; ok 2 - 'parse isa mol' isa 'Chemistry::Mol' ok 3 - enough atoms ok 4 - formula format ok 5 - formula hash 1[Ph(Me)3]2 ok 6 - CH3(CH2)3CH3 = C5H12 ok 7 - C6H3Me3 = C9H12 ok 8 - 2Cu[NH3]4(NO3)2 = Cu2H24N12O12 ok 9 - 2C(C[C5]4)3 = C152 ok 10 - 2C(C(C(C)5)4)3 = C152 ok 11 - C 1 0 H 2 2 = C10H22 ok 12 - CH3Br = CH3Br ok 13 - CH3.1Br0.9 = CH4Br ok 14 - 1.5H2O = H3O2 ok 15 - H(CH2)3.5H = C4H9 ok 16 - parse_formula ok 17 - parse_formula (non-integer) ok 18 - formula_sort ok t/geom.t ............ 1..10 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - three atoms ok 3 - angle ok 4 - dihedral ok 5 - zero angle ok 6 - bad angle ok 7 - bad angle ok 8 - linear angle ok 9 - bad dihedral ok 10 - bad dihedral ok t/graph.t ........... 1..12 ok 1 - clone by Clone ok 2 - clone by Storable ok 3 - got 2 things ok 4 - separate: two mols ok 5 - mol 1 is CClH2 ok 6 - mol 2 is CHO2 ok 7 - bond count for a2 equal to a2 (3)? ok 8 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 9 - combine-new; atoms ok 10 - combine-new; bonds ok 11 - combine-new; formula ok 12 - combine-in place ok t/mem.t ............. 1..8 ok 1 - An object of class 'Chemistry::Mol' isa 'Chemistry::Mol' ok 2 - atoms before ok 3 - delete one atom - atoms ok 4 - delete one atom - bonds ok 5 - delete one atom - mols ok 6 - out of scope - atoms ok 7 - out of scope - bonds ok 8 - out of scope - mols ok t/Mol.t ............. 1..20 ok 1 - use Chemistry::Mol; ok 2 - '$mol' isa 'Chemistry::Mol' ok 3 - '$mol' isa 'Chemistry::Obj' ok 4 - '$atom' isa 'Chemistry::Atom' ok 5 - '$atom' isa 'Chemistry::Obj' ok 6 - '$bond' isa 'Chemistry::Bond' ok 7 - '$bond' isa 'Chemistry::Obj' ok 8 - $mol->atoms ok 9 - $mol->atoms(1) eq $atom ok 10 - $mol->by_id ok 11 - $mol->atoms_by_name ok 12 - $mol->bonds ok 13 - $mol->bonds(1) eq $bond ok 14 - $mol->new_atom ok 15 - $mol->mass ok 16 - $mol->mass ok 17 - before sprout_hydrogens ok 18 - after sprout_hydrogens ok 19 - before sprout_hydrogens ok 20 - $bond->length ok t/Obj.t ............. 1..19 ok 1 - use Chemistry::Obj; ok 2 - 'blank obj' isa 'Chemistry::Obj' ok 3 - name ok 4 - joe01 ok 5 - type ok 6 - stringify ok 7 - eq ok 8 - != ok 9 - == ok 10 - ne ok 11 - attr ok 12 - attr list ok 13 - attr list ok 14 - attr hashref ok 15 - attr hashref ok 16 - attr get hashref ok 17 - del_attr ok 18 - accessor ok 19 - chained accessor ok t/pod.t ............. skipped: You don't have Test::Pod installed t/safe_clone.t ...... 1..9 ok 1 - atom(1) before clone ok 2 - bond(1) before clone ok 3 - mol->id before clone ok 4 - atom(1) after clone ok 5 - bond(1) after clone ok 6 - mol->id after clone ok 7 - atom(1) after safe_clone ok 8 - bond(1) after safe_clone ok 9 - mol->id after safe clone ok t/zlib.t ............ 1..6 ok 1 - 'explicit decompressed read' isa 'Chemistry::Mol' ok 2 - has 8 atoms ok 3 - 'implicit decompressed read' isa 'Chemistry::Mol' ok 4 - has 8 atoms ok 5 - compressed ok ok 6 - implicit compression on output ok All tests successful. Files=19, Tests=225, 3 wallclock secs ( 0.11 usr 0.03 sys + 2.46 cusr 0.49 csys = 3.09 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libchemistry-mol-perl/ make -j20 install DESTDIR=/build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libchemistry-mol-perl-0.39' Manifying 8 pod documents Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Mol.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Tutorial.pod Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Bond.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Atom.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/Obj.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Dumper.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/perl5/Chemistry/File/Formula.pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Bond.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Mol.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Formula.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Tutorial.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Atom.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::File::Dumper.3pm Installing /build/reproducible-path/libchemistry-mol-perl-0.39/debian/libchemistry-mol-perl/usr/share/man/man3/Chemistry::Obj.3pm make[1]: Leaving directory '/build/reproducible-path/libchemistry-mol-perl-0.39' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libchemistry-mol-perl' in '../libchemistry-mol-perl_0.39-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libchemistry-mol-perl_0.39-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2804521 and its subdirectories I: Current time: Fri Nov 22 11:04:03 -12 2024 I: pbuilder-time-stamp: 1732316643 6c6 < base-files (= 13.5), --- > base-files (= 13.6), UPDATE 1 Fri Nov 22 23:04:04 UTC 2024 - https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_11/36473/console.log encountered a problem: different packages were installed in the 1st+2nd builds and also in the 2nd+3rd build. -rw-r--r-- 1 jenkins jenkins 4831 Nov 22 23:04 ./b1/libchemistry-mol-perl_0.39-1_amd64.buildinfo on ionos1-amd64.debian.net -rw-r--r-- 1 jenkins jenkins 4840 Nov 22 23:03 ./b2/libchemistry-mol-perl_0.39-1_amd64.buildinfo on ionos15-amd64.debian.net Starting cleanup. /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/rbuildlog.AOt3Skt: 84.7% -- replaced with /srv/reproducible-results/rbuild-debian/r-b-build.CgG2tX1R/rbuildlog.AOt3Skt.gz [2024-11-22 23:04:04] INFO: Starting at 2024-11-22 23:04:04.898321 [2024-11-22 23:04:04] INFO: Generating the pages of 1 package(s) [2024-11-22 23:04:05] INFO: Finished at 2024-11-22 23:04:05.162037, took: 0:00:00.263723 All cleanup done. Fri Nov 22 23:04:05 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-FxNvl0Cj, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 56.339s CPU time consumed: 5.437s