Running as unit: rb-build-amd64_11-72866.service; invocation ID: 1c04a07f5bb843889b177928ea2cc5aa ==================================================================================== Thu Nov 6 12:26:29 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_11) on jenkins, called using "ionos1-amd64 ionos15-amd64" as arguments. Thu Nov 6 12:26:29 UTC 2025 - actually running "reproducible_build.sh" (md5sum bcb6fe1b50cf4e8eedacd0971a9eb63f) as "/tmp/jenkins-script-HU534vV5" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 6 12:26:29 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Thu Nov 6 12:26:29 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-0jiVYm' Thu Nov 6 12:26:29 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Thu Nov 6 12:26:29 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-h80RrD' ok, let's check if saint is building anywhere yet… ok, saint is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of saint in forky on amd64 on jenkins now. 1st build will be done on ionos1-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Thu Nov 6 12:26:44 UTC 2025 I: starting to build saint/forky/amd64 on jenkins on '2025-11-06 12:26' Thu Nov 6 12:26:44 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_11/72866/console.log 1762432004 amd64 forky saint Thu Nov 6 12:26:44 UTC 2025 I: Downloading source for forky/saint=2.5.0+dfsg-4 --2025-11-06 12:26:44-- http://deb.debian.org/debian/pool/main/s/saint/saint_2.5.0%2bdfsg-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2003 (2.0K) [text/prs.lines.tag] Saving to: ‘saint_2.5.0+dfsg-4.dsc’ 0K . 100% 232M=0s 2025-11-06 12:26:44 (232 MB/s) - ‘saint_2.5.0+dfsg-4.dsc’ saved [2003/2003] --2025-11-06 12:26:44-- http://deb.debian.org/debian/pool/main/s/saint/saint_2.5.0%2bdfsg-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2003 (2.0K) [text/prs.lines.tag] Saving to: ‘saint_2.5.0+dfsg-4.dsc’ 0K . 100% 232M=0s 2025-11-06 12:26:44 (232 MB/s) - ‘saint_2.5.0+dfsg-4.dsc’ saved [2003/2003] Thu Nov 6 12:26:44 UTC 2025 I: saint_2.5.0+dfsg-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: saint Binary: saint Architecture: any Version: 2.5.0+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Thorsten Alteholz Homepage: http://saint-apms.sourceforge.net/Main.html Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/saint Vcs-Git: https://salsa.debian.org/med-team/saint.git Build-Depends: debhelper-compat (= 13), libgsl-dev Package-List: saint deb science optional arch=any Checksums-Sha1: 58f3866d8b68686e42b22e13d3d97e703bff1447 117060 saint_2.5.0+dfsg.orig.tar.xz 00a7e522ea3477e7af093a622f6b205a8e010df7 5620 saint_2.5.0+dfsg-4.debian.tar.xz Checksums-Sha256: 26dfd1dc9a9015ccb01d16ea56c96f9396f3a81d04d9b8b8f3b431595aa548d6 117060 saint_2.5.0+dfsg.orig.tar.xz 50fc9624ce6244a6cd8bf472dd3f341883ee84b7f125fa6ba5cb5f80e0befb24 5620 saint_2.5.0+dfsg-4.debian.tar.xz Files: a521375f525f597f57b6613b70df0a72 117060 saint_2.5.0+dfsg.orig.tar.xz f7ab50cdc0658da2a95b8fc6a0234a7b 5620 saint_2.5.0+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl8hQfcUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafHfWBAArWDIrBQ4sFajPhqT7PBsBe/jGJNO u7F1IrgsY/wECAlosZoVLaSNmB2Sb3H0R+n9bnfLSEAbyJ6FSeMvTsnjtK9XHq+5 yXMhPIT9LLi0j8flovtelG9YfLWv4adUq8obWhGWtFPzxyNdXbbXH1tDy96Gzse0 OoT7H4JJ4LxmPIR8WuzdFJjUte+RwN2eMryy6VE6Mz/updSvKR4HjRDyqZuh3LlD 9Ib8KZ7hfL1gaIqYslpI3jM6uS9T73WZ1W/MJOlaPpzOUHgXHVfPeCWCQ+gvQoye sossXo4zaIbsEIuHaDXxuNQdT1JlNr1jF1z30Anjtz7a4zZzib+KrYwSLR38gjKt MDWxRNBGOrNUwedxEPnrtk5d5Z7nv1lxRWY7UUGKioIEZBIgkeMNsyDwsewVwpcH mYiE66UqKvWgOjmIue23qaWn/2E3InhD1ulGdrO2H2sIksRrlAhbM+GcHu8Fg3OD J2jsrPIAxvt0+c80qhJjV7APIZbT/oJ30Yoa3S9CFMC70xbpY43eztN82i337Hlk fuK5mEVvRtWl/hxCJ7dmZPO43oVKnNfOTLiHpW9KSmcOMfGD08xBs0FSVOJJG25n K8vLQEy+xLkrUPNdWHAmREKDph88gHcSJ4WPwHbxJqosxiprf/AuHN8s0ehuI4nh BrQs7w8UO14++yk= =8yAw -----END PGP SIGNATURE----- Thu Nov 6 12:26:44 UTC 2025 I: Checking whether the package is not for us Thu Nov 6 12:26:44 UTC 2025 I: Starting 1st build on remote node ionos1-amd64.debian.net. Thu Nov 6 12:26:44 UTC 2025 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Thu Nov 6 12:26:45 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Thu Nov 6 12:26:45 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-eRpWBe' ==================================================================================== Thu Nov 6 12:26:45 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "1 saint forky /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV 2.5.0+dfsg-4" as arguments. Thu Nov 6 12:26:45 UTC 2025 - actually running "reproducible_build.sh" (md5sum bcb6fe1b50cf4e8eedacd0971a9eb63f) as "/tmp/jenkins-script-0NSHLe2U" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 6 12:26:45 UTC 2025 I: Downloading source for forky/saint=2.5.0+dfsg-4 Reading package lists... NOTICE: 'saint' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/saint.git Please use: git clone https://salsa.debian.org/med-team/saint.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 125 kB of source archives. Get:1 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (dsc) [2003 B] Get:2 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (tar) [117 kB] Get:3 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (diff) [5620 B] Fetched 125 kB in 0s (6411 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'saint' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/saint.git Please use: git clone https://salsa.debian.org/med-team/saint.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 125 kB of source archives. Get:1 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (dsc) [2003 B] Get:2 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (tar) [117 kB] Get:3 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (diff) [5620 B] Fetched 125 kB in 0s (6411 kB/s) Download complete and in download only mode ============================================================================= Building saint in forky on amd64 on ionos1-amd64 now. Date: Thu Nov 6 12:26:45 UTC 2025 Date UTC: Thu Nov 6 12:26:45 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Nov 6 00:26:45 -12 2025 I: pbuilder-time-stamp: 1762432005 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [saint_2.5.0+dfsg-4.dsc] I: copying [./saint_2.5.0+dfsg.orig.tar.xz] I: copying [./saint_2.5.0+dfsg-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./saint_2.5.0+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting saint in saint-2.5.0+dfsg dpkg-source: info: unpacking saint_2.5.0+dfsg.orig.tar.xz dpkg-source: info: unpacking saint_2.5.0+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-makefile.patch dpkg-source: info: applying ld-as-needed.patch dpkg-source: info: applying fix-gcc10-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3912709/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e4784814864d47ebbfa274adee67d2ec' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3912709' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_Jgzw --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1 --logfile b1/build.log saint_2.5.0+dfsg-4.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3912709/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgsl-dev{a} libgsl28{a} libgslcblas0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After unpacking 55.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.194-1 [185 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libgslcblas0 amd64 2.8+dfsg-5.1 [137 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libgsl28 amd64 2.8+dfsg-5.1 [1068 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libgsl-dev amd64 2.8+dfsg-5.1 [1336 kB] Fetched 13.8 MB in 3s (4405 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-4_amd64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_amd64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-7_all.deb ... Unpacking libtool (2.5.4-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.194-1_amd64.deb ... Unpacking libelf1t64:amd64 (0.194-1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.16-2_amd64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../24-libxml2-16_2.14.6+dfsg-0.1_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Selecting previously unselected package libgslcblas0:amd64. Preparing to unpack .../29-libgslcblas0_2.8+dfsg-5.1_amd64.deb ... Unpacking libgslcblas0:amd64 (2.8+dfsg-5.1) ... Selecting previously unselected package libgsl28:amd64. Preparing to unpack .../30-libgsl28_2.8+dfsg-5.1_amd64.deb ... Unpacking libgsl28:amd64 (2.8+dfsg-5.1) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../31-libgsl-dev_2.8+dfsg-5.1_amd64.deb ... Unpacking libgsl-dev (2.8+dfsg-5.1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libgslcblas0:amd64 (2.8+dfsg-5.1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.194-1) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up libgsl28:amd64 (2.8+dfsg-5.1) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libgsl-dev (2.8+dfsg-5.1) ... Setting up libtool (2.5.4-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.28) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/saint-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../saint_2.5.0+dfsg-4_source.changes dpkg-buildpackage: info: source package saint dpkg-buildpackage: info: source version 2.5.0+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_auto_clean make -j40 clean make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf bin make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' # Tweak hardening flags into the Makefile dh_auto_build --no-parallel -- all CFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now' make -j1 INSTALL="install --strip-program=true" all CFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c: In function 'read_all_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:67:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 67 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:71:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 71 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:73:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:76:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 76 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:139:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 139 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:147:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 147 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:151:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 151 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:246:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 246 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:248:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 248 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:250:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 250 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:31, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:183:32: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 183 | assert(prey_appear = (int *) calloc(nuprey, sizeof(int))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:25: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:225:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 225 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:231:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 231 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:244:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 244 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:251:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 251 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:385:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 385 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:391:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 391 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:404:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 404 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:410:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 410 | chdir(".."); | ^~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:31, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:48:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 48 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:25: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:50:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 50 | assert(data->prob = (double *) calloc(data->nuinter, sizeof(double))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("FILTER"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c: In function 'reread_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:26:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 26 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:32:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:35:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 35 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:62:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 62 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:64:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 64 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:66:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 66 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:97:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:99:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:101:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:103:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'read_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:103:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | system("rm -rf interaction.intermediate"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:129:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 129 | system("mkdir reformat_log"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-reformat -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c: In function 'read_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:95:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 95 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:97:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:101:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:103:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:107:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 107 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:109:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 109 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:119:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 119 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:121:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 121 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:123:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 123 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:125:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:128:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 128 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-noctrl-matrix -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:27:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 27 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:29:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 29 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:31:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 31 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:33:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 33 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:247:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 247 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:253:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 253 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:266:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 266 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:272:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 272 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:301:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 301 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:303:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 303 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:307:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 307 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:447:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 447 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:453:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 453 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:466:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 466 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:472:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 472 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:537:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 537 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:539:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 539 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:541:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 541 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:215:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 215 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c:155:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 155 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c:164:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 164 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:177:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 177 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:178:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:179:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 179 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:180:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 180 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:196:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 196 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:244:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 244 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-noctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:28:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 28 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:30:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:32:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:34:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 34 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:246:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 246 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:252:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 252 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:265:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 265 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:271:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 271 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:297:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 297 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:299:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 299 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:303:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 303 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:445:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 445 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:451:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 451 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:464:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 464 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:470:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 470 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:535:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 535 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:537:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 537 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:539:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 539 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:94:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 94 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:96:33: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 96 | assert(data->prob = (float *) calloc(data->nuinter, sizeof(float))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:214:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 214 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c:168:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 168 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c:177:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 177 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:151:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 151 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:152:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 152 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:153:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:154:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 154 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:166:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 166 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:214:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 214 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-ctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:28:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 28 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:30:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:32:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:34:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 34 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:275:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 275 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:281:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 281 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:294:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 294 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:300:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 300 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:328:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 328 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:331:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 331 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:472:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 472 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:478:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 478 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:491:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 491 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:497:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 497 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:562:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 562 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:564:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 564 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:566:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 566 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:123:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 123 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:125:33: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 125 | assert(data->prob = (float *) calloc(data->nuinter, sizeof(float))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:243:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 243 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c:183:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c:192:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 192 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:142:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 142 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:143:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 143 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:144:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 144 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:145:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 145 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:160:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 160 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:209:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 209 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-int-ctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch -e ### All executables are in /build/reproducible-path/saint-2.5.0+dfsg/bin ### make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/saint/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'saint' in '../saint_2.5.0+dfsg-4_amd64.deb'. dpkg-deb: building package 'saint-dbgsym' in '../saint-dbgsym_2.5.0+dfsg-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../saint_2.5.0+dfsg-4_amd64.buildinfo dpkg-genchanges --build=binary -O../saint_2.5.0+dfsg-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3912709 and its subdirectories I: Current time: Thu Nov 6 00:28:07 -12 2025 I: pbuilder-time-stamp: 1762432087 Thu Nov 6 12:28:07 UTC 2025 I: Signing ./b1/saint_2.5.0+dfsg-4_amd64.buildinfo as saint_2.5.0+dfsg-4_amd64.buildinfo.asc Thu Nov 6 12:28:07 UTC 2025 I: Signed ./b1/saint_2.5.0+dfsg-4_amd64.buildinfo as ./b1/saint_2.5.0+dfsg-4_amd64.buildinfo.asc Thu Nov 6 12:28:07 UTC 2025 - build #1 for saint/forky/amd64 on ionos1-amd64 done. Starting cleanup. All cleanup done. Thu Nov 6 12:28:07 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-0NSHLe2U, removing. /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Nov 6 12:28 b1 drwxrwxr-x 2 jenkins jenkins 4096 Nov 6 12:26 b2 -rw------- 1 jenkins jenkins 3110 Nov 6 12:26 rbuildlog.xqVO9Cm -rw-rw-r-- 1 jenkins jenkins 2003 Jul 29 2020 saint_2.5.0+dfsg-4.dsc /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1: total 492 -rw-r--r-- 1 jenkins jenkins 67699 Nov 6 12:28 build.log -rw-r--r-- 1 jenkins jenkins 298836 Nov 6 12:28 saint-dbgsym_2.5.0+dfsg-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 5620 Nov 6 12:28 saint_2.5.0+dfsg-4.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2003 Nov 6 12:28 saint_2.5.0+dfsg-4.dsc -rw-r--r-- 1 jenkins jenkins 4866 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 5748 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1606 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.changes -rw-r--r-- 1 jenkins jenkins 97192 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 1482 Nov 6 12:28 saint_2.5.0+dfsg-4_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2: total 0 Thu Nov 6 12:28:07 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Nov 6 00:26:45 -12 2025 I: pbuilder-time-stamp: 1762432005 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [saint_2.5.0+dfsg-4.dsc] I: copying [./saint_2.5.0+dfsg.orig.tar.xz] I: copying [./saint_2.5.0+dfsg-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./saint_2.5.0+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting saint in saint-2.5.0+dfsg dpkg-source: info: unpacking saint_2.5.0+dfsg.orig.tar.xz dpkg-source: info: unpacking saint_2.5.0+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-makefile.patch dpkg-source: info: applying ld-as-needed.patch dpkg-source: info: applying fix-gcc10-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3912709/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e4784814864d47ebbfa274adee67d2ec' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3912709' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_Jgzw --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1 --logfile b1/build.log saint_2.5.0+dfsg-4.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3912709/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgsl-dev{a} libgsl28{a} libgslcblas0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After unpacking 55.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.194-1 [185 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libgslcblas0 amd64 2.8+dfsg-5.1 [137 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libgsl28 amd64 2.8+dfsg-5.1 [1068 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libgsl-dev amd64 2.8+dfsg-5.1 [1336 kB] Fetched 13.8 MB in 3s (4405 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-4_amd64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_amd64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-7_all.deb ... Unpacking libtool (2.5.4-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.194-1_amd64.deb ... Unpacking libelf1t64:amd64 (0.194-1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.16-2_amd64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../24-libxml2-16_2.14.6+dfsg-0.1_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Selecting previously unselected package libgslcblas0:amd64. Preparing to unpack .../29-libgslcblas0_2.8+dfsg-5.1_amd64.deb ... Unpacking libgslcblas0:amd64 (2.8+dfsg-5.1) ... Selecting previously unselected package libgsl28:amd64. Preparing to unpack .../30-libgsl28_2.8+dfsg-5.1_amd64.deb ... Unpacking libgsl28:amd64 (2.8+dfsg-5.1) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../31-libgsl-dev_2.8+dfsg-5.1_amd64.deb ... Unpacking libgsl-dev (2.8+dfsg-5.1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libgslcblas0:amd64 (2.8+dfsg-5.1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.194-1) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up libgsl28:amd64 (2.8+dfsg-5.1) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libgsl-dev (2.8+dfsg-5.1) ... Setting up libtool (2.5.4-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.28) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/saint-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../saint_2.5.0+dfsg-4_source.changes dpkg-buildpackage: info: source package saint dpkg-buildpackage: info: source version 2.5.0+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_auto_clean make -j40 clean make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf bin make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' # Tweak hardening flags into the Makefile dh_auto_build --no-parallel -- all CFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now' make -j1 INSTALL="install --strip-program=true" all CFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c: In function 'read_all_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:67:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 67 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:71:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 71 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:73:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:76:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 76 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:139:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 139 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:147:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 147 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:151:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 151 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:246:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 246 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:248:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 248 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:250:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 250 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:31, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:183:32: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 183 | assert(prey_appear = (int *) calloc(nuprey, sizeof(int))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:25: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:225:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 225 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:231:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 231 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:244:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 244 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:251:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 251 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:385:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 385 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:391:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 391 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:404:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 404 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:410:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 410 | chdir(".."); | ^~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:31, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:48:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 48 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:25: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:50:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 50 | assert(data->prob = (double *) calloc(data->nuinter, sizeof(double))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("FILTER"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c: In function 'reread_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:26:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 26 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:32:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:35:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 35 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:62:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 62 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:64:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 64 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:66:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 66 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:97:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:99:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:101:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:103:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'read_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:103:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | system("rm -rf interaction.intermediate"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:129:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 129 | system("mkdir reformat_log"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-reformat -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c: In function 'read_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:95:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 95 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:97:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:101:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:103:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:107:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 107 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:109:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 109 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:119:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 119 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:121:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 121 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:123:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 123 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:125:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:128:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 128 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-noctrl-matrix -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:27:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 27 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:29:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 29 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:31:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 31 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:33:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 33 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:247:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 247 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:253:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 253 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:266:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 266 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:272:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 272 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:301:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 301 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:303:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 303 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:307:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 307 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:447:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 447 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:453:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 453 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:466:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 466 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:472:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 472 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:537:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 537 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:539:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 539 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:541:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 541 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:215:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 215 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c:155:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 155 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c:164:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 164 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:177:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 177 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:178:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:179:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 179 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:180:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 180 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:196:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 196 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:244:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 244 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-noctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:28:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 28 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:30:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:32:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:34:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 34 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:246:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 246 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:252:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 252 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:265:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 265 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:271:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 271 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:297:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 297 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:299:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 299 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:303:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 303 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:445:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 445 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:451:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 451 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:464:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 464 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:470:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 470 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:535:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 535 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:537:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 537 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:539:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 539 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:94:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 94 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:96:33: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 96 | assert(data->prob = (float *) calloc(data->nuinter, sizeof(float))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:214:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 214 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c:168:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 168 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c:177:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 177 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:151:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 151 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:152:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 152 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:153:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:154:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 154 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:166:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 166 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:214:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 214 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-ctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:28:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 28 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:30:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:32:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:34:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 34 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:275:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 275 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:281:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 281 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:294:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 294 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:300:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 300 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:328:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 328 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:331:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 331 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:472:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 472 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:478:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 478 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:491:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 491 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:497:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 497 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:562:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 562 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:564:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 564 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:566:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 566 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:123:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 123 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:125:33: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 125 | assert(data->prob = (float *) calloc(data->nuinter, sizeof(float))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:243:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 243 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c:183:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c:192:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 192 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:142:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 142 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:143:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 143 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:144:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 144 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:145:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 145 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:160:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 160 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:209:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 209 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-int-ctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch -e ### All executables are in /build/reproducible-path/saint-2.5.0+dfsg/bin ### make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/saint/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'saint' in '../saint_2.5.0+dfsg-4_amd64.deb'. dpkg-deb: building package 'saint-dbgsym' in '../saint-dbgsym_2.5.0+dfsg-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../saint_2.5.0+dfsg-4_amd64.buildinfo dpkg-genchanges --build=binary -O../saint_2.5.0+dfsg-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3912709 and its subdirectories I: Current time: Thu Nov 6 00:28:07 -12 2025 I: pbuilder-time-stamp: 1762432087 Thu Nov 6 12:28:08 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Thu Nov 6 12:28:08 UTC 2025 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Thu Nov 6 12:28:08 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Thu Nov 6 12:28:08 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-a3C2pB' ==================================================================================== Wed Dec 9 18:51:08 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 saint forky /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV 2.5.0+dfsg-4" as arguments. Wed Dec 9 18:51:08 UTC 2026 - actually running "reproducible_build.sh" (md5sum bcb6fe1b50cf4e8eedacd0971a9eb63f) as "/tmp/jenkins-script-Yf1CB9TT" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Dec 9 18:51:08 UTC 2026 I: Downloading source for forky/saint=2.5.0+dfsg-4 Reading package lists... NOTICE: 'saint' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/saint.git Please use: git clone https://salsa.debian.org/med-team/saint.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 125 kB of source archives. Get:1 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (dsc) [2003 B] Get:2 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (tar) [117 kB] Get:3 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (diff) [5620 B] Fetched 125 kB in 0s (5582 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'saint' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/saint.git Please use: git clone https://salsa.debian.org/med-team/saint.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 125 kB of source archives. Get:1 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (dsc) [2003 B] Get:2 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (tar) [117 kB] Get:3 http://deb.debian.org/debian forky/main saint 2.5.0+dfsg-4 (diff) [5620 B] Fetched 125 kB in 0s (5582 kB/s) Download complete and in download only mode ============================================================================= Re-Building saint in forky on amd64 on ionos15-amd64 now. Date: Wed Dec 9 18:51:08 UTC 2026 Date UTC: Wed Dec 9 18:51:08 UTC 2026 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_1nSm + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' saint = debian-installer -o saint = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' saint = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_1nSm --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2 --logfile b2/build.log saint_2.5.0+dfsg-4.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 10 08:51:09 +14 2026 I: pbuilder-time-stamp: 1796842269 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [saint_2.5.0+dfsg-4.dsc] I: copying [./saint_2.5.0+dfsg.orig.tar.xz] I: copying [./saint_2.5.0+dfsg-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./saint_2.5.0+dfsg-4.dsc: no acceptable signature found dpkg-source: info: extracting saint in saint-2.5.0+dfsg dpkg-source: info: unpacking saint_2.5.0+dfsg.orig.tar.xz dpkg-source: info: unpacking saint_2.5.0+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-makefile.patch dpkg-source: info: applying ld-as-needed.patch dpkg-source: info: applying fix-gcc10-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 9 18:51 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 nocheck' DIRSTACK=() DISTRIBUTION=forky EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=f3e47345a25446aca3b51c12ca03b355 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1807991 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_1nSm --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2 --logfile b2/build.log saint_2.5.0+dfsg-4.dsc' SUDO_GID=111 SUDO_HOME=/var/lib/jenkins SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgsl-dev{a} libgsl28{a} libgslcblas0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After unpacking 55.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.194-1 [185 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libgslcblas0 amd64 2.8+dfsg-5.1 [137 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libgsl28 amd64 2.8+dfsg-5.1 [1068 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libgsl-dev amd64 2.8+dfsg-5.1 [1336 kB] Fetched 13.8 MB in 0s (139 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-4_amd64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_amd64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-7_all.deb ... Unpacking libtool (2.5.4-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.194-1_amd64.deb ... Unpacking libelf1t64:amd64 (0.194-1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.16-2_amd64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../24-libxml2-16_2.14.6+dfsg-0.1_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Selecting previously unselected package libgslcblas0:amd64. Preparing to unpack .../29-libgslcblas0_2.8+dfsg-5.1_amd64.deb ... Unpacking libgslcblas0:amd64 (2.8+dfsg-5.1) ... Selecting previously unselected package libgsl28:amd64. Preparing to unpack .../30-libgsl28_2.8+dfsg-5.1_amd64.deb ... Unpacking libgsl28:amd64 (2.8+dfsg-5.1) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../31-libgsl-dev_2.8+dfsg-5.1_amd64.deb ... Unpacking libgsl-dev (2.8+dfsg-5.1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libgslcblas0:amd64 (2.8+dfsg-5.1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.194-1) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up libgsl28:amd64 (2.8+dfsg-5.1) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libgsl-dev (2.8+dfsg-5.1) ... Setting up libtool (2.5.4-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.28) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for forky I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/saint-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../saint_2.5.0+dfsg-4_source.changes dpkg-buildpackage: info: source package saint dpkg-buildpackage: info: source version 2.5.0+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_auto_clean make -j42 clean make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf bin make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' # Tweak hardening flags into the Makefile dh_auto_build --no-parallel -- all CFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now' make -j1 INSTALL="install --strip-program=true" all CFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c: In function 'read_all_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:67:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 67 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:71:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 71 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:73:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:76:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 76 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:139:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 139 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:147:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 147 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:151:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 151 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:246:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 246 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:248:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 248 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:250:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 250 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:31, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/initdata.c:183:32: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 183 | assert(prey_appear = (int *) calloc(nuprey, sizeof(int))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:25: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:225:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 225 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:231:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 231 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:244:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 244 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:251:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 251 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:385:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 385 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:391:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 391 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:404:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 404 | chdir("reformat_log"); | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:410:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 410 | chdir(".."); | ^~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:31, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:48:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 48 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.h:25: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/mapping.c:50:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 50 | assert(data->prob = (double *) calloc(data->nuinter, sizeof(double))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("FILTER"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c: In function 'reread_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:26:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 26 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:32:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:35:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 35 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:62:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 62 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:64:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 64 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:66:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 66 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:97:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:99:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:101:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/remap.c:103:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'read_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:103:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | system("rm -rf interaction.intermediate"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTreformat/saint.c:129:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 129 | system("mkdir reformat_log"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-reformat -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c: In function 'read_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:95:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 95 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:97:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:101:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:103:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:107:20: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 107 | for(j=0;j<4;j++) fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:109:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 109 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:119:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 119 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:121:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 121 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:123:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 123 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:125:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/init_data.c:128:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 128 | fscanf(fp,"%s",buf); | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl-matrix/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-noctrl-matrix -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:27:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 27 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:29:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 29 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:31:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 31 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:33:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 33 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:247:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 247 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:253:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 253 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:266:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 266 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:272:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 272 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:301:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 301 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:303:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 303 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:307:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 307 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:447:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 447 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:453:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 453 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:466:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 466 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:472:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 472 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:537:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 537 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:539:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 539 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:541:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 541 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/initdata.c:215:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 215 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c:155:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 155 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/result.c:164:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 164 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:177:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 177 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:178:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:179:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 179 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:180:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 180 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:196:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 196 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-noctrl/saint.c:244:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 244 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-noctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:28:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 28 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:30:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:32:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:34:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 34 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:246:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 246 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:252:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 252 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:265:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 265 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:271:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 271 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:297:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 297 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:299:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 299 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:303:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 303 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:445:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 445 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:451:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 451 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:464:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 464 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:470:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 470 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:535:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 535 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:537:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 537 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:539:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 539 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:94:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 94 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:96:33: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 96 | assert(data->prob = (float *) calloc(data->nuinter, sizeof(float))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/initdata.c:214:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 214 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c:168:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 168 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/result.c:177:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 177 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:151:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 151 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:152:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 152 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:153:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:154:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 154 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:166:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 166 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTspc-ctrl/saint.c:214:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 214 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-spc-ctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/saint-2.5.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro -Wl,-z,now -c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/*.c /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/*.h /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_interaction_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:28:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 28 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:30:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:32:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 32 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:34:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 34 | fscanf(fpinter, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:275:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 275 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:281:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 281 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:294:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 294 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:300:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 300 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_prey_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:328:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 328 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:331:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 331 | fscanf(fpprey, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapIPBaitToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:472:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 472 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:478:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 478 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:491:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 491 | chdir("LOG"); | ^~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:497:5: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 497 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'read_bait_data': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:562:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 562 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:564:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 564 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:566:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 566 | fscanf(fpbait, "%s", buf); | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.h:29, from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:1: /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'find_unique_interaction': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:123:34: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 123 | assert(data->ubait = (char **) calloc(data->nuinter, sizeof(char *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.h:22: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:125:33: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 125 | assert(data->prob = (float *) calloc(data->nuinter, sizeof(float))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c: In function 'mapPreyToData': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/initdata.c:243:31: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 243 | assert(data->p2i = (int **) calloc(data->nprey, sizeof(int *))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c: In function 'printMap': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c:99:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | chdir("MAPPING"); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/printmap.c:105:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 105 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c: In function 'write_result': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c:183:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | chdir("RESULT"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/result.c:192:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 192 | chdir(".."); | ^~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c: In function 'ncol': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:25:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 25 | fgets(buf, sizeof(buf), fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c: In function 'main': /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:142:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 142 | system("mkdir LOG"); /* error logs */ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:143:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 143 | system("mkdir MAPPING"); /* mapping logs */ | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:144:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 144 | system("mkdir MCMC"); /* posterior samples */ | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:145:3: warning: ignoring return value of 'system' declared with attribute 'warn_unused_result' [-Wunused-result] 145 | system("mkdir RESULT"); /* posterior probabilities, other summaries */ | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:160:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 160 | chdir("MCMC"); | ^~~~~~~~~~~~~ /build/reproducible-path/saint-2.5.0+dfsg/src/SAINTint-ctrl/saint.c:209:3: warning: ignoring return value of 'chdir' declared with attribute 'warn_unused_result' [-Wunused-result] 209 | chdir(".."); | ^~~~~~~~~~~ mv *.o /build/reproducible-path/saint-2.5.0+dfsg/build gcc -Wl,-z,relro -Wl,-z,now /build/reproducible-path/saint-2.5.0+dfsg/build/*.o -o /build/reproducible-path/saint-2.5.0+dfsg/bin/saint-int-ctrl -lm -lgsl -lgslcblas rm /build/reproducible-path/saint-2.5.0+dfsg/build/*.o rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch ### All executables are in /build/reproducible-path/saint-2.5.0+dfsg/bin ### make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' dh: command-omitted: The call to "dh_auto_test" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/saint/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'saint' in '../saint_2.5.0+dfsg-4_amd64.deb'. dpkg-deb: building package 'saint-dbgsym' in '../saint-dbgsym_2.5.0+dfsg-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../saint_2.5.0+dfsg-4_amd64.buildinfo dpkg-genchanges --build=binary -O../saint_2.5.0+dfsg-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1807991 and its subdirectories I: Current time: Thu Dec 10 08:51:56 +14 2026 I: pbuilder-time-stamp: 1796842316 + false + set +x Wed Dec 9 18:51:56 UTC 2026 I: Signing ./b2/saint_2.5.0+dfsg-4_amd64.buildinfo as saint_2.5.0+dfsg-4_amd64.buildinfo.asc Wed Dec 9 18:51:57 UTC 2026 I: Signed ./b2/saint_2.5.0+dfsg-4_amd64.buildinfo as ./b2/saint_2.5.0+dfsg-4_amd64.buildinfo.asc Wed Dec 9 18:51:57 UTC 2026 - build #2 for saint/forky/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Wed Dec 9 18:51:57 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-Yf1CB9TT, removing. /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV: total 88 drwxrwxr-x 2 jenkins jenkins 4096 Nov 6 12:28 b1 drwxrwxr-x 2 jenkins jenkins 4096 Nov 6 12:28 b2 -rw------- 1 jenkins jenkins 71097 Nov 6 12:28 rbuildlog.xqVO9Cm -rw-rw-r-- 1 jenkins jenkins 2003 Jul 29 2020 saint_2.5.0+dfsg-4.dsc /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1: total 504 -rw-r--r-- 1 jenkins jenkins 67699 Nov 6 12:28 build.log -rw-r--r-- 1 jenkins jenkins 298836 Nov 6 12:28 saint-dbgsym_2.5.0+dfsg-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 5620 Nov 6 12:28 saint_2.5.0+dfsg-4.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2003 Nov 6 12:28 saint_2.5.0+dfsg-4.dsc -rw-r--r-- 1 jenkins jenkins 4866 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 5748 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1606 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.changes -rw-r--r-- 1 jenkins jenkins 97192 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 1482 Nov 6 12:28 saint_2.5.0+dfsg-4_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2: total 496 -rw-rw-r-- 1 jenkins jenkins 69710 Nov 6 12:28 build.log -rw-r--r-- 1 jenkins jenkins 298836 Nov 6 12:28 saint-dbgsym_2.5.0+dfsg-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 5620 Nov 6 12:28 saint_2.5.0+dfsg-4.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2003 Nov 6 12:28 saint_2.5.0+dfsg-4.dsc -rw-rw-r-- 1 jenkins jenkins 4874 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 5756 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 1606 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.changes -rw-r--r-- 1 jenkins jenkins 97192 Nov 6 12:28 saint_2.5.0+dfsg-4_amd64.deb -rw-rw-r-- 1 jenkins jenkins 1482 Nov 6 12:28 saint_2.5.0+dfsg-4_source.changes Thu Nov 6 12:28:57 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Thu Nov 6 12:28:57 UTC 2025 I: saint_2.5.0+dfsg-4_amd64.changes: Format: 1.8 Date: Tue, 28 Jul 2020 20:55:59 +0530 Source: saint Binary: saint saint-dbgsym Architecture: amd64 Version: 2.5.0+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: saint - Significance Analysis of INTeractome Closes: 957772 Changes: saint (2.5.0+dfsg-4) unstable; urgency=medium . * Team Upload. [ Steffen Moeller ] * d/u/metadata: yamllint * Update metadata with ref to conda . [ Nilesh Patra ] * Fix gcc-10 FTBFS (Closes: #957772) * Drop compate, debhelper-compat 13 * standards version: 4.5.0 * Add "Rules-Requires-Root:no" * Use secure URI Checksums-Sha1: c672354948c13661c35657e1a381e8e8ce10b078 298836 saint-dbgsym_2.5.0+dfsg-4_amd64.deb ac794b0953158b04280cc0bc4c15e0a8b1cda808 4866 saint_2.5.0+dfsg-4_amd64.buildinfo 6a160ef3b6e12c6783e35cee058490e67e210e8b 97192 saint_2.5.0+dfsg-4_amd64.deb Checksums-Sha256: 0043423eff9f0cfae5a74411ce9a013d9ad9a8129213cc9805be281551fd5642 298836 saint-dbgsym_2.5.0+dfsg-4_amd64.deb f6c131e67e6f5fddd234abbb395b499de6d07bca459d99111602f27c6d8b7622 4866 saint_2.5.0+dfsg-4_amd64.buildinfo 896f10769acc0a2508f3271f00e7cda9938747a81d186d8727fe3adf265e1d70 97192 saint_2.5.0+dfsg-4_amd64.deb Files: 0004e210400aa433e8833b274009adfc 298836 debug optional saint-dbgsym_2.5.0+dfsg-4_amd64.deb 0213ab7e36280db1e0d6ae55b75b11ca 4866 science optional saint_2.5.0+dfsg-4_amd64.buildinfo 2ab07aaf61bc257dee08bac5497818ed 97192 science optional saint_2.5.0+dfsg-4_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/saint_2.5.0+dfsg-4.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/saint_2.5.0+dfsg-4.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/saint_2.5.0+dfsg-4.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/saint_2.5.0+dfsg-4.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/amd64/saint_2.5.0+dfsg-4_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/saint_2.5.0+dfsg-4.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-11-06 12:28:07.784319817 +0000 +++ b2/build.log 2025-11-06 12:28:57.416376545 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Nov 6 00:26:45 -12 2025 -I: pbuilder-time-stamp: 1762432005 +I: Current time: Thu Dec 10 08:51:09 +14 2026 +I: pbuilder-time-stamp: 1796842269 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -26,53 +26,85 @@ dpkg-source: info: applying fix-gcc10-build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3912709/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 9 18:51 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 nocheck' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='e4784814864d47ebbfa274adee67d2ec' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3912709' - PS1='# ' - PS2='> ' + INVOCATION_ID=f3e47345a25446aca3b51c12ca03b355 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1807991 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_Jgzw --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1 --logfile b1/build.log saint_2.5.0+dfsg-4.dsc' - SUDO_GID='110' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/pbuilderrc_1nSm --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2 --logfile b2/build.log saint_2.5.0+dfsg-4.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3912709/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -142,7 +174,7 @@ Get: 30 http://deb.debian.org/debian forky/main amd64 libgslcblas0 amd64 2.8+dfsg-5.1 [137 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libgsl28 amd64 2.8+dfsg-5.1 [1068 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libgsl-dev amd64 2.8+dfsg-5.1 [1336 kB] -Fetched 13.8 MB in 3s (4405 kB/s) +Fetched 13.8 MB in 0s (139 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19862 files and directories currently installed.) @@ -285,7 +317,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/saint-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../saint_2.5.0+dfsg-4_source.changes +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/saint-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../saint_2.5.0+dfsg-4_source.changes dpkg-buildpackage: info: source package saint dpkg-buildpackage: info: source version 2.5.0+dfsg-4 dpkg-buildpackage: info: source distribution unstable @@ -297,7 +333,7 @@ debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' dh_auto_clean - make -j40 clean + make -j42 clean make[2]: Entering directory '/build/reproducible-path/saint-2.5.0+dfsg' rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch @@ -859,14 +895,14 @@ rm -rf /build/reproducible-path/saint-2.5.0+dfsg/build rm -f /build/reproducible-path/saint-2.5.0+dfsg/src/*/*.gch --e + ### All executables are in /build/reproducible-path/saint-2.5.0+dfsg/bin ### make[2]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' make[1]: Leaving directory '/build/reproducible-path/saint-2.5.0+dfsg' - dh_auto_test +dh: command-omitted: The call to "dh_auto_test" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/saint/ @@ -897,12 +933,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1807991/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3912709 and its subdirectories -I: Current time: Thu Nov 6 00:28:07 -12 2025 -I: pbuilder-time-stamp: 1762432087 +I: removing directory /srv/workspace/pbuilder/1807991 and its subdirectories +I: Current time: Thu Dec 10 08:51:56 +14 2026 +I: pbuilder-time-stamp: 1796842316 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/saint_2.5.0+dfsg-4.diff: 67.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/saint_2.5.0+dfsg-4.diff.gz b2/build.log: 87.8% -- replaced with stdout Compressing the 1st log... b1/build.log: 88.6% -- replaced with stdout Thu Nov 6 12:28:58 UTC 2025 I: diffoscope 307 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_saint_forky_amd64_1762432138 + touch /var/log/reproducible-builds/diffoscope_stamp_saint_forky_amd64_1762432138 + RESULT=0 + systemd-run '--description=diffoscope on saint/2.5.0+dfsg-4 in forky/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_11-72866 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV --run-session -c jenkins-reproducible-forky-diffoscope-11812dce-d074-40ad-9861-c1b7257ded28 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/dbd-tmp-q5tDFXI ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/saint_2.5.0+dfsg-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/saint_2.5.0+dfsg-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/saint_2.5.0+dfsg-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1/saint_2.5.0+dfsg-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2/saint_2.5.0+dfsg-4_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_11-72866.service; invocation ID: 2a7158905047416ca9d11e256f8fbd30 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/saint_2.5.0+dfsg-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/saint_2.5.0+dfsg-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/saint_2.5.0+dfsg-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b1/saint_2.5.0+dfsg-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.9A9vNWHV/b2/saint_2.5.0+dfsg-4_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 215ms CPU time consumed: 182ms Memory peak: 16.9M (swap: 0B) _ _ ___ __ _(_)_ __ | |_ / __|/ _` | | '_ \| __| \__ \ (_| | | | | | |_ |___/\__,_|_|_| |_|\__| Thu Nov 6 12:28:58 UTC 2025 I: diffoscope 307 found no differences in the changes files, and a .buildinfo file also exists. Thu Nov 6 12:28:58 UTC 2025 I: saint from forky built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-11-06 12:28:59] INFO: Starting at 2025-11-06 12:28:59.215357 [2025-11-06 12:28:59] INFO: Generating the pages of 1 package(s) [2025-11-06 12:28:59] CRITICAL: https://tests.reproducible-builds.org/debian/forky/amd64/saint didn't produce a buildlog, even though it has been built. [2025-11-06 12:28:59] INFO: Finished at 2025-11-06 12:28:59.508614, took: 0:00:00.293259 Thu Nov 6 12:28:59 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/forky/amd64/saint.html Thu Nov 6 12:28:59 UTC 2025 I: Removing signed saint_2.5.0+dfsg-4_amd64.buildinfo.asc files: removed './b1/saint_2.5.0+dfsg-4_amd64.buildinfo.asc' removed './b2/saint_2.5.0+dfsg-4_amd64.buildinfo.asc' 1762432139 amd64 forky saint Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/saint_2.5.0+dfsg-4.rbuild.log: 85.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/saint_2.5.0+dfsg-4.rbuild.log.gz [2025-11-06 12:28:59] INFO: Starting at 2025-11-06 12:28:59.839024 [2025-11-06 12:28:59] INFO: Generating the pages of 1 package(s) [2025-11-06 12:29:00] INFO: Finished at 2025-11-06 12:29:00.121096, took: 0:00:00.282076 All cleanup done. Thu Nov 6 12:29:00 UTC 2025 - total duration: 0h 2m 29s. Thu Nov 6 12:29:00 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-HU534vV5, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 2min 30.870s CPU time consumed: 3.776s Memory peak: 40.2M (swap: 0B)