Running as unit: rb-build-amd64_15-60483.service ==================================================================================== Sun Jun 15 05:47:06 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_15) on jenkins, called using "ionos11-amd64 ionos15-amd64" as arguments. Sun Jun 15 05:47:06 UTC 2025 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-gxGLmoTQ" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Jun 15 05:47:06 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sun Jun 15 05:47:06 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-qlJxKQ' Sun Jun 15 05:47:07 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Sun Jun 15 05:47:07 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-3Lwt6g' ok, let's check if gwama is building anywhere yet… ok, gwama is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of gwama in unstable on amd64 on jenkins now. 1st build will be done on ionos11-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Sun Jun 15 05:47:13 UTC 2025 I: starting to build gwama/unstable/amd64 on jenkins on '2025-06-15 05:47' Sun Jun 15 05:47:13 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_15/60483/console.log 1749966433 amd64 unstable gwama Sun Jun 15 05:47:13 UTC 2025 I: Downloading source for unstable/gwama=2.2.2+dfsg-6 --2025-06-15 05:47:14-- http://deb.debian.org/debian/pool/main/g/gwama/gwama_2.2.2%2bdfsg-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1971 (1.9K) [text/prs.lines.tag] Saving to: ‘gwama_2.2.2+dfsg-6.dsc’ 0K . 100% 234M=0s 2025-06-15 05:47:14 (234 MB/s) - ‘gwama_2.2.2+dfsg-6.dsc’ saved [1971/1971] --2025-06-15 05:47:14-- http://deb.debian.org/debian/pool/main/g/gwama/gwama_2.2.2%2bdfsg-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1971 (1.9K) [text/prs.lines.tag] Saving to: ‘gwama_2.2.2+dfsg-6.dsc’ 0K . 100% 234M=0s 2025-06-15 05:47:14 (234 MB/s) - ‘gwama_2.2.2+dfsg-6.dsc’ saved [1971/1971] Sun Jun 15 05:47:14 UTC 2025 I: gwama_2.2.2+dfsg-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: gwama Binary: gwama Architecture: any Version: 2.2.2+dfsg-6 Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi , Homepage: https://genomics.ut.ee/en/tools Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/gwama Vcs-Git: https://salsa.debian.org/med-team/gwama.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: gwama deb science optional arch=any Checksums-Sha1: 2092f02222b9e9ae2dcbfe73ee362f76dac4bd55 32136 gwama_2.2.2+dfsg.orig.tar.xz 0c2e9b22a0c818225c101ed577030ee1d6842536 12128 gwama_2.2.2+dfsg-6.debian.tar.xz Checksums-Sha256: f9e4574381088c5e9102bc84dbd5640778be6f4ebd236e78ddc9ba0243c63965 32136 gwama_2.2.2+dfsg.orig.tar.xz b92549a3bdb11fbdefa564e818079929ea45a5f1de7fd18c5d2f36df436752ab 12128 gwama_2.2.2+dfsg-6.debian.tar.xz Files: 475adc2a26588dcdf36ad6a75daeb0d0 32136 gwama_2.2.2+dfsg.orig.tar.xz c18b47678d47ad6bbd6e1347bd71254f 12128 gwama_2.2.2+dfsg-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmddxLMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFfMg//Z5VgcWxLVjsrWvp2F6DgAa4XiFklcwW9 8xIpyu6oEmJatg6pydBNAs3BETVlcyq8dEqeKJHBxb0eIMR7fs9NMDuKCPq4PsBT h4Lw50c0/uhxPbUSS0tDNFUYnJ756h83SadGrtvJhVILZn0c2bAbf3pJdbH6bRRa x8v/Yn6+mgKbJRHFnb7vPM2x2mG6TCHOCgvu/BkChU2URzzlvtzdHt6LhkKMo8y/ YheesFcsC9SdadsoS5qbLdMq7HSl1k2Y0VjmjEq2N0Gs2L+jDNXCDa1d6/dm46zO PmHilPpNutTHnBxAQXrectEqSy3sB+NTaoRz/RCECmEPm3/v/yiEXlseM5UC/5hu 0N9Ad8q6x/OKCdvHQVmDRQUoKpHAVNSA855ZWjuf8WcGa07o2o85WzcVCGlHcukZ dcQEJlVU8OQPrK/+Gd0GltyRsBsigGJzb6XlKJCyPS5BAhVV0+gs2LG2HTExdYnH y9t6JPb8bg7tgN3H7yUcVAl8F6VNyubD50uTnOvqer9QmkqXZ9Anauh2UnA3ieTs zWmb2cc9GDGq5FWORIphY9JWX+ikCaBR2PDmgUPXIqBS669AmrYViuzJ8EdFOQ8s Zz054lvqNof3mzuEUL+nvhDzqX5Ym2LxCE8wi2YtGZEMjyXLSBPLsZVZRGwWaXYf gP2piYAX67k= =Wr8S -----END PGP SIGNATURE----- Sun Jun 15 05:47:14 UTC 2025 I: Checking whether the package is not for us Sun Jun 15 05:47:14 UTC 2025 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sun Jun 15 05:47:14 UTC 2025 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sun Jun 15 05:47:14 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sun Jun 15 05:47:14 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-TvYHMc' ==================================================================================== Sun Jun 15 05:47:14 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "1 gwama unstable /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet 2.2.2+dfsg-6" as arguments. Sun Jun 15 05:47:14 UTC 2025 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-IcnhCOj9" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Jun 15 05:47:14 UTC 2025 I: Downloading source for unstable/gwama=2.2.2+dfsg-6 Reading package lists... NOTICE: 'gwama' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gwama.git Please use: git clone https://salsa.debian.org/med-team/gwama.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (dsc) [1971 B] Get:2 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (tar) [32.1 kB] Get:3 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (diff) [12.1 kB] Fetched 46.2 kB in 0s (1812 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'gwama' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gwama.git Please use: git clone https://salsa.debian.org/med-team/gwama.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (dsc) [1971 B] Get:2 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (tar) [32.1 kB] Get:3 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (diff) [12.1 kB] Fetched 46.2 kB in 0s (1812 kB/s) Download complete and in download only mode ============================================================================= Building gwama in unstable on amd64 on ionos11-amd64 now. Date: Sun Jun 15 05:47:15 UTC 2025 Date UTC: Sun Jun 15 05:47:15 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 14 17:47:15 -12 2025 I: pbuilder-time-stamp: 1749966435 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gwama_2.2.2+dfsg-6.dsc] I: copying [./gwama_2.2.2+dfsg.orig.tar.xz] I: copying [./gwama_2.2.2+dfsg-6.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./gwama_2.2.2+dfsg-6.dsc: no acceptable signature found dpkg-source: info: extracting gwama in gwama-2.2.2+dfsg dpkg-source: info: unpacking gwama_2.2.2+dfsg.orig.tar.xz dpkg-source: info: unpacking gwama_2.2.2+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_Makefile_Add_FLAGS_to_activate_Hardening.patch dpkg-source: info: applying 03.Fix_lintian_spelling-error-in-binary.patch dpkg-source: info: applying 04-Fix-non-cross-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3602917/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='1a7c04c4c189473cb05caf9aa2cce359' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3602917' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_W4sH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1 --logfile b1/build.log gwama_2.2.2+dfsg-6.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-37-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.140-1 (2025-05-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3602917/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19850 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After unpacking 44.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2 [243 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41-5 [94.6 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-1 [698 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2 [1680 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 12.1 MB in 0s (106 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19850 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2_amd64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-5_amd64.deb ... Unpacking bsdextrautils (2.41-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_amd64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2_amd64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-8) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/gwama-2.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gwama_2.2.2+dfsg-6_source.changes dpkg-buildpackage: info: source package gwama dpkg-buildpackage: info: source version 2.2.2+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_build -- CXXFLAGS="-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make -j40 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make[2]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' g++ -g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now main.cpp marker.cpp statistics.cpp study.cpp chisquaredistr.cpp normaldistr.cpp gammaf.cpp igammaf.cpp ap.cpp global.cpp problem.cpp tools.cpp cohort.cpp commandLine.cpp readFile.cpp -Wno-deprecated -O3 -lz -o GWAMA make[2]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/gwama/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' # Install upstream log2.txt file as changelog dh_installchangelogs debian/upstream.docs/gwama_log.txt make[1]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'gwama' in '../gwama_2.2.2+dfsg-6_amd64.deb'. dpkg-deb: building package 'gwama-dbgsym' in '../gwama-dbgsym_2.2.2+dfsg-6_amd64.deb'. dpkg-genbuildinfo --build=binary -O../gwama_2.2.2+dfsg-6_amd64.buildinfo dpkg-genchanges --build=binary -O../gwama_2.2.2+dfsg-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3602917 and its subdirectories I: Current time: Sat Jun 14 17:48:09 -12 2025 I: pbuilder-time-stamp: 1749966489 Sun Jun 15 05:48:09 UTC 2025 I: Signing ./b1/gwama_2.2.2+dfsg-6_amd64.buildinfo as gwama_2.2.2+dfsg-6_amd64.buildinfo.asc Sun Jun 15 05:48:09 UTC 2025 I: Signed ./b1/gwama_2.2.2+dfsg-6_amd64.buildinfo as ./b1/gwama_2.2.2+dfsg-6_amd64.buildinfo.asc Sun Jun 15 05:48:09 UTC 2025 - build #1 for gwama/unstable/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Sun Jun 15 05:48:09 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-IcnhCOj9, removing. /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Jun 15 05:48 b1 drwxr-xr-x 2 jenkins jenkins 4096 Jun 15 05:47 b2 -rw-r--r-- 1 jenkins jenkins 1971 Dec 14 17:59 gwama_2.2.2+dfsg-6.dsc -rw------- 1 jenkins jenkins 3086 Jun 15 05:47 rbuildlog.2ZE6rEf /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1: total 1008 -rw-r--r-- 1 jenkins jenkins 19290 Jun 15 05:48 build.log -rw-r--r-- 1 jenkins jenkins 878456 Jun 15 05:48 gwama-dbgsym_2.2.2+dfsg-6_amd64.deb -rw-r--r-- 1 jenkins jenkins 12128 Jun 15 05:48 gwama_2.2.2+dfsg-6.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1971 Jun 15 05:48 gwama_2.2.2+dfsg-6.dsc -rw-r--r-- 1 jenkins jenkins 4921 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5803 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1477 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.changes -rw-r--r-- 1 jenkins jenkins 86284 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.deb -rw-r--r-- 1 jenkins jenkins 1355 Jun 15 05:48 gwama_2.2.2+dfsg-6_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2: total 0 Sun Jun 15 05:48:10 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 14 17:47:15 -12 2025 I: pbuilder-time-stamp: 1749966435 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gwama_2.2.2+dfsg-6.dsc] I: copying [./gwama_2.2.2+dfsg.orig.tar.xz] I: copying [./gwama_2.2.2+dfsg-6.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./gwama_2.2.2+dfsg-6.dsc: no acceptable signature found dpkg-source: info: extracting gwama in gwama-2.2.2+dfsg dpkg-source: info: unpacking gwama_2.2.2+dfsg.orig.tar.xz dpkg-source: info: unpacking gwama_2.2.2+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_Makefile_Add_FLAGS_to_activate_Hardening.patch dpkg-source: info: applying 03.Fix_lintian_spelling-error-in-binary.patch dpkg-source: info: applying 04-Fix-non-cross-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3602917/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='1a7c04c4c189473cb05caf9aa2cce359' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3602917' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_W4sH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1 --logfile b1/build.log gwama_2.2.2+dfsg-6.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-37-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.140-1 (2025-05-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3602917/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19850 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After unpacking 44.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2 [243 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41-5 [94.6 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-1 [698 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2 [1680 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 12.1 MB in 0s (106 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19850 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2_amd64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-5_amd64.deb ... Unpacking bsdextrautils (2.41-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_amd64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2_amd64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-8) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/gwama-2.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gwama_2.2.2+dfsg-6_source.changes dpkg-buildpackage: info: source package gwama dpkg-buildpackage: info: source version 2.2.2+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_build -- CXXFLAGS="-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make -j40 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make[2]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' g++ -g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now main.cpp marker.cpp statistics.cpp study.cpp chisquaredistr.cpp normaldistr.cpp gammaf.cpp igammaf.cpp ap.cpp global.cpp problem.cpp tools.cpp cohort.cpp commandLine.cpp readFile.cpp -Wno-deprecated -O3 -lz -o GWAMA make[2]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/gwama/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' # Install upstream log2.txt file as changelog dh_installchangelogs debian/upstream.docs/gwama_log.txt make[1]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'gwama' in '../gwama_2.2.2+dfsg-6_amd64.deb'. dpkg-deb: building package 'gwama-dbgsym' in '../gwama-dbgsym_2.2.2+dfsg-6_amd64.deb'. dpkg-genbuildinfo --build=binary -O../gwama_2.2.2+dfsg-6_amd64.buildinfo dpkg-genchanges --build=binary -O../gwama_2.2.2+dfsg-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3602917 and its subdirectories I: Current time: Sat Jun 14 17:48:09 -12 2025 I: pbuilder-time-stamp: 1749966489 Sun Jun 15 05:48:10 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Sun Jun 15 05:48:10 UTC 2025 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Sun Jun 15 05:48:10 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Sun Jun 15 05:48:10 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-Gwr7KA' ==================================================================================== Sat Jul 18 12:11:10 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 gwama unstable /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet 2.2.2+dfsg-6" as arguments. Sat Jul 18 12:11:10 UTC 2026 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-4AAgWtsd" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Jul 18 12:11:10 UTC 2026 I: Downloading source for unstable/gwama=2.2.2+dfsg-6 Reading package lists... NOTICE: 'gwama' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gwama.git Please use: git clone https://salsa.debian.org/med-team/gwama.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (dsc) [1971 B] Get:2 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (tar) [32.1 kB] Get:3 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (diff) [12.1 kB] Fetched 46.2 kB in 0s (981 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'gwama' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gwama.git Please use: git clone https://salsa.debian.org/med-team/gwama.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (dsc) [1971 B] Get:2 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (tar) [32.1 kB] Get:3 http://deb.debian.org/debian unstable/main gwama 2.2.2+dfsg-6 (diff) [12.1 kB] Fetched 46.2 kB in 0s (981 kB/s) Download complete and in download only mode ============================================================================= Re-Building gwama in unstable on amd64 on ionos15-amd64 now. Date: Sat Jul 18 12:11:11 UTC 2026 Date UTC: Sat Jul 18 12:11:11 UTC 2026 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_lcP5 + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' gwama = debian-installer -o gwama = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' gwama = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_lcP5 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2 --logfile b2/build.log gwama_2.2.2+dfsg-6.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Jul 19 02:11:11 +14 2026 I: pbuilder-time-stamp: 1784376671 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gwama_2.2.2+dfsg-6.dsc] I: copying [./gwama_2.2.2+dfsg.orig.tar.xz] I: copying [./gwama_2.2.2+dfsg-6.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./gwama_2.2.2+dfsg-6.dsc: no acceptable signature found dpkg-source: info: extracting gwama in gwama-2.2.2+dfsg dpkg-source: info: unpacking gwama_2.2.2+dfsg.orig.tar.xz dpkg-source: info: unpacking gwama_2.2.2+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_Makefile_Add_FLAGS_to_activate_Hardening.patch dpkg-source: info: applying 03.Fix_lintian_spelling-error-in-binary.patch dpkg-source: info: applying 04-Fix-non-cross-build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jul 18 12:11 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=1f8ccd77d9624cb4bcfe433688f0a7da LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=628074 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_lcP5 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2 --logfile b2/build.log gwama_2.2.2+dfsg-6.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.12.27+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.27-1~bpo12+1 (2025-05-19) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19850 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After unpacking 44.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2 [243 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41-5 [94.6 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-1 [698 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2 [1680 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 12.1 MB in 2s (6149 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19850 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2_amd64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-5_amd64.deb ... Unpacking bsdextrautils (2.41-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_amd64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2_amd64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-8) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/628074/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/628074/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/gwama-2.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gwama_2.2.2+dfsg-6_source.changes dpkg-buildpackage: info: source package gwama dpkg-buildpackage: info: source version 2.2.2+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_build -- CXXFLAGS="-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make -j42 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make[2]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' g++ -g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now main.cpp marker.cpp statistics.cpp study.cpp chisquaredistr.cpp normaldistr.cpp gammaf.cpp igammaf.cpp ap.cpp global.cpp problem.cpp tools.cpp cohort.cpp commandLine.cpp readFile.cpp -Wno-deprecated -O3 -lz -o GWAMA make[2]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/gwama/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' # Install upstream log2.txt file as changelog dh_installchangelogs debian/upstream.docs/gwama_log.txt make[1]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'gwama' in '../gwama_2.2.2+dfsg-6_amd64.deb'. dpkg-deb: building package 'gwama-dbgsym' in '../gwama-dbgsym_2.2.2+dfsg-6_amd64.deb'. dpkg-genbuildinfo --build=binary -O../gwama_2.2.2+dfsg-6_amd64.buildinfo dpkg-genchanges --build=binary -O../gwama_2.2.2+dfsg-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/628074/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/628074/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/628074 and its subdirectories I: Current time: Sun Jul 19 02:12:51 +14 2026 I: pbuilder-time-stamp: 1784376771 + false + set +x Sat Jul 18 12:12:51 UTC 2026 I: Signing ./b2/gwama_2.2.2+dfsg-6_amd64.buildinfo as gwama_2.2.2+dfsg-6_amd64.buildinfo.asc Sat Jul 18 12:12:51 UTC 2026 I: Signed ./b2/gwama_2.2.2+dfsg-6_amd64.buildinfo as ./b2/gwama_2.2.2+dfsg-6_amd64.buildinfo.asc Sat Jul 18 12:12:51 UTC 2026 - build #2 for gwama/unstable/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Sat Jul 18 12:12:51 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-4AAgWtsd, removing. /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet: total 36 drwxr-xr-x 2 jenkins jenkins 4096 Jun 15 05:48 b1 drwxr-xr-x 2 jenkins jenkins 4096 Jun 15 05:49 b2 -rw-r--r-- 1 jenkins jenkins 1971 Dec 14 17:59 gwama_2.2.2+dfsg-6.dsc -rw------- 1 jenkins jenkins 22665 Jun 15 05:48 rbuildlog.2ZE6rEf /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1: total 1016 -rw-r--r-- 1 jenkins jenkins 19290 Jun 15 05:48 build.log -rw-r--r-- 1 jenkins jenkins 878456 Jun 15 05:48 gwama-dbgsym_2.2.2+dfsg-6_amd64.deb -rw-r--r-- 1 jenkins jenkins 12128 Jun 15 05:48 gwama_2.2.2+dfsg-6.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1971 Jun 15 05:48 gwama_2.2.2+dfsg-6.dsc -rw-r--r-- 1 jenkins jenkins 4921 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5803 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1477 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.changes -rw-r--r-- 1 jenkins jenkins 86284 Jun 15 05:48 gwama_2.2.2+dfsg-6_amd64.deb -rw-r--r-- 1 jenkins jenkins 1355 Jun 15 05:48 gwama_2.2.2+dfsg-6_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2: total 1012 -rw-r--r-- 1 jenkins jenkins 21226 Jun 15 05:49 build.log -rw-r--r-- 1 jenkins jenkins 878456 Jun 15 05:49 gwama-dbgsym_2.2.2+dfsg-6_amd64.deb -rw-r--r-- 1 jenkins jenkins 12128 Jun 15 05:49 gwama_2.2.2+dfsg-6.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1971 Jun 15 05:49 gwama_2.2.2+dfsg-6.dsc -rw-r--r-- 1 jenkins jenkins 4932 Jun 15 05:49 gwama_2.2.2+dfsg-6_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5814 Jun 15 05:49 gwama_2.2.2+dfsg-6_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1477 Jun 15 05:49 gwama_2.2.2+dfsg-6_amd64.changes -rw-r--r-- 1 jenkins jenkins 86284 Jun 15 05:49 gwama_2.2.2+dfsg-6_amd64.deb -rw-r--r-- 1 jenkins jenkins 1355 Jun 15 05:49 gwama_2.2.2+dfsg-6_source.changes Sun Jun 15 05:49:52 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Sun Jun 15 05:49:53 UTC 2025 I: gwama_2.2.2+dfsg-6_amd64.changes: Format: 1.8 Date: Sat, 14 Dec 2024 18:45:55 +0100 Source: gwama Binary: gwama gwama-dbgsym Architecture: amd64 Version: 2.2.2+dfsg-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: gwama - Genome-Wide Association Meta Analysis Closes: 1044305 Changes: gwama (2.2.2+dfsg-6) unstable; urgency=medium . * Team upload. * Fix clean target Closes: #1044305 * Fix Homepage * Point watch file to new location * Standards-Version: 4.7.0 (routine-update) Checksums-Sha1: 1279d8af37656bfab3bc4bc0cf4bff12eb317fbf 878456 gwama-dbgsym_2.2.2+dfsg-6_amd64.deb 3c03ed9e5620d1e27c5797d306e82262e572e66c 4921 gwama_2.2.2+dfsg-6_amd64.buildinfo 5f9b0913552a040affcabf65b78c95d8d2e1ecf2 86284 gwama_2.2.2+dfsg-6_amd64.deb Checksums-Sha256: fa9dc6090f2162a4a497ec662346f2866e7a731967b2eced7f643079f9b47cce 878456 gwama-dbgsym_2.2.2+dfsg-6_amd64.deb 8d6020ebefdc17a6e24cbc15ceb5751ac39cc0540ae1e98c1c4734aed3f07836 4921 gwama_2.2.2+dfsg-6_amd64.buildinfo 9cc17676458c73ef31e7084ef49281668374011cdcb0daf99d177ca976407f0b 86284 gwama_2.2.2+dfsg-6_amd64.deb Files: 2dd49c3dd9c836c5d10fb3191e0c15c3 878456 debug optional gwama-dbgsym_2.2.2+dfsg-6_amd64.deb 6e33e015aab5bd375bdfbe4a93c61a30 4921 science optional gwama_2.2.2+dfsg-6_amd64.buildinfo 582c895472eadea3ea95831e71dc3b8e 86284 science optional gwama_2.2.2+dfsg-6_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/gwama_2.2.2+dfsg-6.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/gwama_2.2.2+dfsg-6.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/gwama_2.2.2+dfsg-6.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/gwama_2.2.2+dfsg-6.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/amd64/gwama_2.2.2+dfsg-6_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/gwama_2.2.2+dfsg-6.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-06-15 05:48:10.220742186 +0000 +++ b2/build.log 2025-06-15 05:49:52.821417823 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jun 14 17:47:15 -12 2025 -I: pbuilder-time-stamp: 1749966435 +I: Current time: Sun Jul 19 02:11:11 +14 2026 +I: pbuilder-time-stamp: 1784376671 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: applying 04-Fix-non-cross-build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3602917/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 18 12:11 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='1a7c04c4c189473cb05caf9aa2cce359' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3602917' - PS1='# ' - PS2='> ' + INVOCATION_ID=1f8ccd77d9624cb4bcfe433688f0a7da + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=628074 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_W4sH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1 --logfile b1/build.log gwama_2.2.2+dfsg-6.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/pbuilderrc_lcP5 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2 --logfile b2/build.log gwama_2.2.2+dfsg-6.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-37-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.140-1 (2025-05-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.27+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.27-1~bpo12+1 (2025-05-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3602917/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -139,7 +171,7 @@ Get: 28 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] -Fetched 12.1 MB in 0s (106 MB/s) +Fetched 12.1 MB in 2s (6149 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19850 files and directories currently installed.) @@ -274,7 +306,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/gwama-2.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gwama_2.2.2+dfsg-6_source.changes +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/gwama-2.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gwama_2.2.2+dfsg-6_source.changes dpkg-buildpackage: info: source package gwama dpkg-buildpackage: info: source version 2.2.2+dfsg-6 dpkg-buildpackage: info: source distribution unstable @@ -293,7 +329,7 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' dh_auto_build -- CXXFLAGS="-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" - make -j40 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" + make -j42 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection" make[2]: Entering directory '/build/reproducible-path/gwama-2.2.2+dfsg' g++ -g -ffile-prefix-map=/build/reproducible-path/gwama-2.2.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now main.cpp marker.cpp statistics.cpp study.cpp chisquaredistr.cpp normaldistr.cpp gammaf.cpp igammaf.cpp ap.cpp global.cpp problem.cpp tools.cpp cohort.cpp commandLine.cpp readFile.cpp -Wno-deprecated -O3 -lz -o GWAMA make[2]: Leaving directory '/build/reproducible-path/gwama-2.2.2+dfsg' @@ -334,12 +370,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/628074/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3602917 and its subdirectories -I: Current time: Sat Jun 14 17:48:09 -12 2025 -I: pbuilder-time-stamp: 1749966489 +I: removing directory /srv/workspace/pbuilder/628074 and its subdirectories +I: Current time: Sun Jul 19 02:12:51 +14 2026 +I: pbuilder-time-stamp: 1784376771 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/gwama_2.2.2+dfsg-6.diff: 67.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/gwama_2.2.2+dfsg-6.diff.gz b2/build.log: 73.6% -- replaced with stdout Compressing the 1st log... b1/build.log: 74.5% -- replaced with stdout Sun Jun 15 05:49:53 UTC 2025 I: diffoscope 298 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_gwama_unstable_amd64_1749966593 + touch /var/log/reproducible-builds/diffoscope_stamp_gwama_unstable_amd64_1749966593 + RESULT=0 + systemd-run '--description=diffoscope on gwama/2.2.2+dfsg-6 in unstable/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_15-60483 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet --run-session -c jenkins-reproducible-unstable-diffoscope-2c5307e2-134d-40fc-aea7-3bc66b3a1ff0 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/dbd-tmp-qFzVB7h ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/gwama_2.2.2+dfsg-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/gwama_2.2.2+dfsg-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/gwama_2.2.2+dfsg-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1/gwama_2.2.2+dfsg-6_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2/gwama_2.2.2+dfsg-6_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_15-60483.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/gwama_2.2.2+dfsg-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/gwama_2.2.2+dfsg-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/gwama_2.2.2+dfsg-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b1/gwama_2.2.2+dfsg-6_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.Qa8UoXet/b2/gwama_2.2.2+dfsg-6_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 160ms CPU time consumed: 162ms __ ___ ____ _ _ __ ___ __ _ / _` \ \ /\ / / _` | '_ ` _ \ / _` | | (_| |\ V V / (_| | | | | | | (_| | \__, | \_/\_/ \__,_|_| |_| |_|\__,_| |___/ Sun Jun 15 05:49:54 UTC 2025 I: diffoscope 298 found no differences in the changes files, and a .buildinfo file also exists. Sun Jun 15 05:49:54 UTC 2025 I: gwama from unstable built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-06-15 05:49:54] INFO: Starting at 2025-06-15 05:49:54.675322 [2025-06-15 05:49:54] INFO: Generating the pages of 1 package(s) [2025-06-15 05:49:54] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/gwama didn't produce a buildlog, even though it has been built. [2025-06-15 05:49:54] INFO: Finished at 2025-06-15 05:49:54.892817, took: 0:00:00.217497 Sun Jun 15 05:49:54 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/gwama.html Sun Jun 15 05:49:54 UTC 2025 I: Removing signed gwama_2.2.2+dfsg-6_amd64.buildinfo.asc files: removed './b1/gwama_2.2.2+dfsg-6_amd64.buildinfo.asc' removed './b2/gwama_2.2.2+dfsg-6_amd64.buildinfo.asc' 1749966594 amd64 unstable gwama Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/gwama_2.2.2+dfsg-6.rbuild.log: 70.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/gwama_2.2.2+dfsg-6.rbuild.log.gz [2025-06-15 05:49:55] INFO: Starting at 2025-06-15 05:49:55.138539 [2025-06-15 05:49:55] INFO: Generating the pages of 1 package(s) [2025-06-15 05:49:55] INFO: Finished at 2025-06-15 05:49:55.351270, took: 0:00:00.212733 All cleanup done. Sun Jun 15 05:49:55 UTC 2025 - total duration: 0h 2m 48s. Sun Jun 15 05:49:55 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-gxGLmoTQ, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 48.732s CPU time consumed: 4.328s