Running as unit: rb-build-amd64_21-31937.service ==================================================================================== Sat Feb 22 20:30:57 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_21) on jenkins, called using "ionos11-amd64 ionos5-amd64" as arguments. Sat Feb 22 20:30:57 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-HH272ZMw" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Feb 22 20:30:57 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sat Feb 22 20:30:57 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-rNFa6j' Sat Feb 22 20:30:57 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Sat Feb 22 20:30:57 UTC 2025 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-3PQqaa' ok, let's check if ssm is building anywhere yet… ok, ssm is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of ssm in unstable on amd64 on jenkins now. 1st build will be done on ionos11-amd64.debian.net. 2nd build will be done on ionos5-amd64.debian.net. ============================================================================= Sat Feb 22 20:31:05 UTC 2025 I: starting to build ssm/unstable/amd64 on jenkins on '2025-02-22 20:30' Sat Feb 22 20:31:05 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_21/31937/console.log 1740256265 amd64 unstable ssm Sat Feb 22 20:31:05 UTC 2025 I: Downloading source for unstable/ssm=1.4.0-2 --2025-02-22 20:31:05-- http://deb.debian.org/debian/pool/main/s/ssm/ssm_1.4.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2080 (2.0K) [text/prs.lines.tag] Saving to: ‘ssm_1.4.0-2.dsc’ 0K .. 100% 293M=0s 2025-02-22 20:31:05 (293 MB/s) - ‘ssm_1.4.0-2.dsc’ saved [2080/2080] --2025-02-22 20:31:05-- http://deb.debian.org/debian/pool/main/s/ssm/ssm_1.4.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2080 (2.0K) [text/prs.lines.tag] Saving to: ‘ssm_1.4.0-2.dsc’ 0K .. 100% 293M=0s 2025-02-22 20:31:05 (293 MB/s) - ‘ssm_1.4.0-2.dsc’ saved [2080/2080] Sat Feb 22 20:31:05 UTC 2025 I: ssm_1.4.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ssm Binary: libssm-dev, libssm-bin, libssm2 Architecture: any Version: 1.4.0-2 Maintainer: Debian Science Maintainers Uploaders: Picca Frédéric-Emmanuel , Andrius Merkys Homepage: http://www.ccp4.ac.uk/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/science-team/ssm Vcs-Git: https://salsa.debian.org/science-team/ssm.git Build-Depends: debhelper-compat (= 13), libccp4-dev, libmmdb2-dev Package-List: libssm-bin deb science optional arch=any libssm-dev deb libdevel optional arch=any libssm2 deb libs optional arch=any Checksums-Sha1: f94aac4b14bf3effe4f788a03b26897fe381ea42 431780 ssm_1.4.0.orig.tar.gz e5bcffa2f395a0970205600e0d49bdbbda5ce456 3492 ssm_1.4.0-2.debian.tar.xz Checksums-Sha256: dea88fd6a2716702ba064ca7c5889d98ee994b1d76227634cb3f7228893a8238 431780 ssm_1.4.0.orig.tar.gz ca917b6e03579a2e78e5050fd88d57adf62fec92651052debc499d0259d220e6 3492 ssm_1.4.0-2.debian.tar.xz Files: 3cf7b2854141a60e85068a02a240155b 431780 ssm_1.4.0.orig.tar.gz dd10a3d457a458488a88357d45fa147d 3492 ssm_1.4.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl+00e4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG3lw/8CG7rLUWiBWBqu0TtfogyIcLts/GO7ZEk W53+pJUdaBe3XiOuw0shrEajedgEL7dAf7di6gWBHtU60WleRz/SW8HZGkeei7Jd ZhDN4KNAPZvi23BLAm7WGdCoSEAZSe0Yu9UPIAxGIovdurfGaCiLMli+IC+dhTs7 CU4c525CZ6THvdc1fR1KEyUdxwhR4Qi5Mme6tUlcc0EflTxVONZKFx05iVdwC+ao ZQQDe4gx7/wLB5awgFXDZ6lm3y74A0E15fIMfeyQYeQHteDdrm2F65ikn8hEI9J2 PbiwaMLlsWqnjJBmN8WPZUiEaSCSpoFJx8fu5hdr6WsVxZ5vQLK3JyrID2prk9tQ xNdvDjaG+YdZ/9mV4jC8Y6zPslbD9PKqIXTBFLs90ZX/H0DAS38EG57cXSR3gF1k CDPHv21h1oQPSxG9rOX+O4ul7NKjO31f1U8KkE2YByG+ctOPq44VSiqG1ajWTmn2 0nr55tpgxK83xQJi71iXH/vO1i5bGTNGAoSaGbPaNODyGkcG5jECQZT3z6WNcm4I D3UgHaPjtPkD+QY3mJjsTlgV/eJD8cAhpDL4pgW5O0cTncVOwwJ/DxjaZAuFhnNl 0om97rHJquVSh+7PmXcN6SysQb+Uij4lSrrWplW0twDWhTjyEe0Jz77ly450VrMD RHWDqnMk/t4= =nLqd -----END PGP SIGNATURE----- Sat Feb 22 20:31:05 UTC 2025 I: Checking whether the package is not for us Sat Feb 22 20:31:05 UTC 2025 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sat Feb 22 20:31:05 UTC 2025 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sat Feb 22 20:31:05 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sat Feb 22 20:31:05 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-4cxw6B' ==================================================================================== Sat Feb 22 20:31:07 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "1 ssm unstable /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk 1.4.0-2" as arguments. Sat Feb 22 20:31:07 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-7kblsCqT" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Feb 22 20:31:07 UTC 2025 I: Downloading source for unstable/ssm=1.4.0-2 Reading package lists... NOTICE: 'ssm' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/ssm.git Please use: git clone https://salsa.debian.org/science-team/ssm.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 437 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (dsc) [2080 B] Get:2 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (tar) [432 kB] Get:3 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (diff) [3492 B] Fetched 437 kB in 0s (9506 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'ssm' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/ssm.git Please use: git clone https://salsa.debian.org/science-team/ssm.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 437 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (dsc) [2080 B] Get:2 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (tar) [432 kB] Get:3 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (diff) [3492 B] Fetched 437 kB in 0s (9506 kB/s) Download complete and in download only mode ============================================================================= Building ssm in unstable on amd64 on ionos11-amd64 now. Date: Sat Feb 22 20:31:08 UTC 2025 Date UTC: Sat Feb 22 20:31:08 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Feb 22 08:31:08 -12 2025 I: pbuilder-time-stamp: 1740256268 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ssm_1.4.0-2.dsc] I: copying [./ssm_1.4.0.orig.tar.gz] I: copying [./ssm_1.4.0-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./ssm_1.4.0-2.dsc: unsupported subcommand dpkg-source: info: extracting ssm in ssm-1.4.0 dpkg-source: info: unpacking ssm_1.4.0.orig.tar.gz dpkg-source: info: unpacking ssm_1.4.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3882608/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='96526f66647c4b1799a315c722ecffa7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3882608' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_iND7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1 --logfile b1/build.log ssm_1.4.0-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3882608/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libccp4-dev, libmmdb2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19775 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libccp4-dev; however: Package libccp4-dev is not installed. pbuilder-satisfydepends-dummy depends on libmmdb2-dev; however: Package libmmdb2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libmmdb2-0{a} libmmdb2-dev{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 22.2 MB of archives. After unpacking 85.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-4 [92.4 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-3 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libccp4-data all 8.0.0-4 [62.7 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libccp4c0t64 amd64 8.0.0-4 [89.9 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libmmdb2-0 amd64 2.0.22-1+b2 [342 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libccp4f0t64 amd64 8.0.0-4 [208 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libccp4-dev amd64 8.0.0-4 [42.9 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libmmdb2-dev amd64 2.0.22-1+b2 [92.9 kB] Fetched 22.2 MB in 1s (23.3 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19775 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-4_amd64.deb ... Unpacking bsdextrautils (2.40.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-5_amd64.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../24-libicu72_72.1-6_amd64.deb ... Unpacking libicu72:amd64 (72.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/ssm-1.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ssm_1.4.0-2_source.changes dpkg-buildpackage: info: source package ssm dpkg-buildpackage: info: source version 1.4.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_autoreconf_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" debian/rules binary dh binary --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_update_autotools_config "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_autoreconf "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:40: warning: AC_OUTPUT should be used without arguments. configure.ac:40: You should run autoupdate. configure.ac:11: installing 'build-aux/compile' configure.ac:8: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_auto_configure -- --enable-superpose --enable-ccp4 --disable-static --enable-shared ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-superpose --enable-ccp4 --disable-static --enable-shared checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for library containing cos... -lm checking for MMDB_CCIF_Init in -lmmdb2... yes checking for mmdb2/mmdb_manager.h... yes checking for ccp4_banner in -lccp4c... yes checking for ccp4/ccp4_general.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ssm.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_build "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j20 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make all-am make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-superpose.o `test -f 'superpose.cpp' || echo './'`superpose.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_pairwise.o `test -f 'sup_pairwise.cpp' || echo './'`sup_pairwise.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_multiple.o `test -f 'sup_multiple.cpp' || echo './'`sup_multiple.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_superpose.lo ssm/ssm_superpose.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_csia.lo ssm/ssm_csia.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_vxedge.lo ssm/ssm_vxedge.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_align.lo ssm/ssm_align.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_malign.lo ssm/ssm_malign.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_graph.lo ssm/ssm_graph.cpp superpose.cpp:117:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:117:27: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:298:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ superpose.cpp:298:37: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_csia.cpp -fPIC -DPIC -o ssm/.libs/ssm_csia.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_vxedge.cpp -fPIC -DPIC -o ssm/.libs/ssm_vxedge.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_graph.cpp -fPIC -DPIC -o ssm/.libs/ssm_graph.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_malign.cpp -fPIC -DPIC -o ssm/.libs/ssm_malign.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_superpose.cpp -fPIC -DPIC -o ssm/.libs/ssm_superpose.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_align.cpp -fPIC -DPIC -o ssm/.libs/ssm_align.o ssm/ssm_csia.cpp: In member function 'void ssm::GraphMatch::FreeMemory()': ssm/ssm_csia.cpp:290:21: warning: 'void operator delete [](void*)' called on pointer '*' with nonzero offset 8 [-Wfree-nonheap-object] 290 | delete[] P[i]; | ^ /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -no-undefined -version-info 2:0:0 -Wl,-z,relro -o libssm.la -rpath /usr/lib/x86_64-linux-gnu ssm/ssm_superpose.lo ssm/ssm_csia.lo ssm/ssm_vxedge.lo ssm/ssm_align.lo ssm/ssm_malign.lo ssm/ssm_graph.lo -lmmdb2 -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o ssm/.libs/ssm_superpose.o ssm/.libs/ssm_csia.o ssm/.libs/ssm_vxedge.o ssm/.libs/ssm_align.o ssm/.libs/ssm_malign.o ssm/.libs/ssm_graph.o -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-soname -Wl,libssm.so.2 -o .libs/libssm.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libssm.so.2" && ln -s "libssm.so.2.0.0" "libssm.so.2") libtool: link: (cd ".libs" && rm -f "libssm.so" && ln -s "libssm.so.2.0.0" "libssm.so") libtool: link: ( cd ".libs" && rm -f "libssm.la" && ln -s "../libssm.la" "libssm.la" ) /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z,relro -o superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o libssm.la -lmmdb2 -lccp4c -lm libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z -Wl,relro -o .libs/superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o ./.libs/libssm.so -lmmdb2 -lccp4c -lm make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_test "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j20 check "TESTSUITEFLAGS=-j20 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' create-stamp debian/debhelper-build-stamp dh_testroot "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_prep "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_auto_install "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j1 install DESTDIR=/build/reproducible-path/ssm-1.4.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ./libtool --mode=install /usr/bin/install -c libssm.la '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libssm.so.2.0.0 /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.so.2.0.0 libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so.2 || { rm -f libssm.so.2 && ln -s libssm.so.2.0.0 libssm.so.2; }; }) libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.2.0.0 libssm.so; }; }) libtool: install: /usr/bin/install -c .libs/libssm.lai /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.la libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c superpose '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' libtool: warning: 'libssm.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/superpose /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin/superpose /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 ssm.pc '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' /usr/bin/install -c -m 644 ssm/ssm_superpose.h ssm/ssm_csia.h ssm/ssm_vxedge.h ssm/ssm_align.h ssm/ssm_malign.h ssm/ssm_graph.h ssm/ssm_defs.h '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_install find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_installdocs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installchangelogs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installman "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installsystemduser "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_perl "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_link "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip_nondeterminism "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_compress "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_fixperms "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_missing "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_dwz -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_makeshlibs -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_shlibdeps -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installdeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_gencontrol "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_md5sums "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_builddeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dpkg-deb: building package 'libssm2' in '../libssm2_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin' in '../libssm-bin_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin-dbgsym' in '../libssm-bin-dbgsym_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-dev' in '../libssm-dev_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm2-dbgsym' in '../libssm2-dbgsym_1.4.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../ssm_1.4.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../ssm_1.4.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3882608 and its subdirectories I: Current time: Sat Feb 22 08:34:52 -12 2025 I: pbuilder-time-stamp: 1740256492 Sat Feb 22 20:34:52 UTC 2025 I: Signing ./b1/ssm_1.4.0-2_amd64.buildinfo as ssm_1.4.0-2_amd64.buildinfo.asc Sat Feb 22 20:34:52 UTC 2025 I: Signed ./b1/ssm_1.4.0-2_amd64.buildinfo as ./b1/ssm_1.4.0-2_amd64.buildinfo.asc Sat Feb 22 20:34:52 UTC 2025 - build #1 for ssm/unstable/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Sat Feb 22 20:34:52 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-7kblsCqT, removing. /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Feb 22 20:34 b1 drwxr-xr-x 2 jenkins jenkins 4096 Feb 22 20:31 b2 -rw------- 1 jenkins jenkins 3154 Feb 22 20:31 rbuildlog.EUttLsJ -rw-r--r-- 1 jenkins jenkins 2080 Nov 18 2020 ssm_1.4.0-2.dsc /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1: total 412 -rw-r--r-- 1 jenkins jenkins 39234 Feb 22 20:34 build.log -rw-r--r-- 1 jenkins jenkins 29708 Feb 22 20:34 libssm-bin-dbgsym_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 13464 Feb 22 20:34 libssm-bin_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 14876 Feb 22 20:34 libssm-dev_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 194872 Feb 22 20:34 libssm2-dbgsym_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 83624 Feb 22 20:34 libssm2_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 3492 Feb 22 20:34 ssm_1.4.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2080 Feb 22 20:34 ssm_1.4.0-2.dsc -rw-r--r-- 1 jenkins jenkins 5845 Feb 22 20:34 ssm_1.4.0-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6727 Feb 22 20:34 ssm_1.4.0-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2658 Feb 22 20:34 ssm_1.4.0-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1514 Feb 22 20:34 ssm_1.4.0-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2: total 0 Sat Feb 22 20:34:53 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Feb 22 08:31:08 -12 2025 I: pbuilder-time-stamp: 1740256268 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ssm_1.4.0-2.dsc] I: copying [./ssm_1.4.0.orig.tar.gz] I: copying [./ssm_1.4.0-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./ssm_1.4.0-2.dsc: unsupported subcommand dpkg-source: info: extracting ssm in ssm-1.4.0 dpkg-source: info: unpacking ssm_1.4.0.orig.tar.gz dpkg-source: info: unpacking ssm_1.4.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3882608/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='96526f66647c4b1799a315c722ecffa7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3882608' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_iND7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1 --logfile b1/build.log ssm_1.4.0-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3882608/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libccp4-dev, libmmdb2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19775 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libccp4-dev; however: Package libccp4-dev is not installed. pbuilder-satisfydepends-dummy depends on libmmdb2-dev; however: Package libmmdb2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libmmdb2-0{a} libmmdb2-dev{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 22.2 MB of archives. After unpacking 85.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-4 [92.4 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-3 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libccp4-data all 8.0.0-4 [62.7 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libccp4c0t64 amd64 8.0.0-4 [89.9 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libmmdb2-0 amd64 2.0.22-1+b2 [342 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libccp4f0t64 amd64 8.0.0-4 [208 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libccp4-dev amd64 8.0.0-4 [42.9 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libmmdb2-dev amd64 2.0.22-1+b2 [92.9 kB] Fetched 22.2 MB in 1s (23.3 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19775 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-4_amd64.deb ... Unpacking bsdextrautils (2.40.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-5_amd64.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../24-libicu72_72.1-6_amd64.deb ... Unpacking libicu72:amd64 (72.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package libccp4-data. Preparing to unpack .../30-libccp4-data_8.0.0-4_all.deb ... Unpacking libccp4-data (8.0.0-4) ... Selecting previously unselected package libccp4c0t64:amd64. Preparing to unpack .../31-libccp4c0t64_8.0.0-4_amd64.deb ... Unpacking libccp4c0t64:amd64 (8.0.0-4) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../32-libgfortran5_14.2.0-17_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-17) ... Selecting previously unselected package libmmdb2-0:amd64. Preparing to unpack .../33-libmmdb2-0_2.0.22-1+b2_amd64.deb ... Unpacking libmmdb2-0:amd64 (2.0.22-1+b2) ... Selecting previously unselected package libccp4f0t64:amd64. Preparing to unpack .../34-libccp4f0t64_8.0.0-4_amd64.deb ... Unpacking libccp4f0t64:amd64 (8.0.0-4) ... Selecting previously unselected package libccp4-dev:amd64. Preparing to unpack .../35-libccp4-dev_8.0.0-4_amd64.deb ... Unpacking libccp4-dev:amd64 (8.0.0-4) ... Selecting previously unselected package libmmdb2-dev. Preparing to unpack .../36-libmmdb2-dev_2.0.22-1+b2_amd64.deb ... Unpacking libmmdb2-dev (2.0.22-1+b2) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up bsdextrautils (2.40.4-4) ... Setting up libmmdb2-0:amd64 (2.0.22-1+b2) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libccp4-data (8.0.0-4) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up libmmdb2-dev (2.0.22-1+b2) ... Setting up autopoint (0.23.1-1) ... Setting up libgfortran5:amd64 (14.2.0-17) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libccp4c0t64:amd64 (8.0.0-4) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-3) ... Setting up libccp4f0t64:amd64 (8.0.0-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libccp4-dev:amd64 (8.0.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Processing triggers for libc-bin (2.40-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/ssm-1.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ssm_1.4.0-2_source.changes dpkg-buildpackage: info: source package ssm dpkg-buildpackage: info: source version 1.4.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_autoreconf_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" debian/rules binary dh binary --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_update_autotools_config "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_autoreconf "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:40: warning: AC_OUTPUT should be used without arguments. configure.ac:40: You should run autoupdate. configure.ac:11: installing 'build-aux/compile' configure.ac:8: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_auto_configure -- --enable-superpose --enable-ccp4 --disable-static --enable-shared ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-superpose --enable-ccp4 --disable-static --enable-shared checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for library containing cos... -lm checking for MMDB_CCIF_Init in -lmmdb2... yes checking for mmdb2/mmdb_manager.h... yes checking for ccp4_banner in -lccp4c... yes checking for ccp4/ccp4_general.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ssm.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_build "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j20 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make all-am make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-superpose.o `test -f 'superpose.cpp' || echo './'`superpose.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_pairwise.o `test -f 'sup_pairwise.cpp' || echo './'`sup_pairwise.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_multiple.o `test -f 'sup_multiple.cpp' || echo './'`sup_multiple.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_superpose.lo ssm/ssm_superpose.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_csia.lo ssm/ssm_csia.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_vxedge.lo ssm/ssm_vxedge.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_align.lo ssm/ssm_align.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_malign.lo ssm/ssm_malign.cpp /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_graph.lo ssm/ssm_graph.cpp superpose.cpp:117:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:117:27: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:298:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ superpose.cpp:298:37: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_csia.cpp -fPIC -DPIC -o ssm/.libs/ssm_csia.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_vxedge.cpp -fPIC -DPIC -o ssm/.libs/ssm_vxedge.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_graph.cpp -fPIC -DPIC -o ssm/.libs/ssm_graph.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_malign.cpp -fPIC -DPIC -o ssm/.libs/ssm_malign.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_superpose.cpp -fPIC -DPIC -o ssm/.libs/ssm_superpose.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_align.cpp -fPIC -DPIC -o ssm/.libs/ssm_align.o ssm/ssm_csia.cpp: In member function 'void ssm::GraphMatch::FreeMemory()': ssm/ssm_csia.cpp:290:21: warning: 'void operator delete [](void*)' called on pointer '*' with nonzero offset 8 [-Wfree-nonheap-object] 290 | delete[] P[i]; | ^ /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -no-undefined -version-info 2:0:0 -Wl,-z,relro -o libssm.la -rpath /usr/lib/x86_64-linux-gnu ssm/ssm_superpose.lo ssm/ssm_csia.lo ssm/ssm_vxedge.lo ssm/ssm_align.lo ssm/ssm_malign.lo ssm/ssm_graph.lo -lmmdb2 -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o ssm/.libs/ssm_superpose.o ssm/.libs/ssm_csia.o ssm/.libs/ssm_vxedge.o ssm/.libs/ssm_align.o ssm/.libs/ssm_malign.o ssm/.libs/ssm_graph.o -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-soname -Wl,libssm.so.2 -o .libs/libssm.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libssm.so.2" && ln -s "libssm.so.2.0.0" "libssm.so.2") libtool: link: (cd ".libs" && rm -f "libssm.so" && ln -s "libssm.so.2.0.0" "libssm.so") libtool: link: ( cd ".libs" && rm -f "libssm.la" && ln -s "../libssm.la" "libssm.la" ) /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z,relro -o superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o libssm.la -lmmdb2 -lccp4c -lm libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z -Wl,relro -o .libs/superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o ./.libs/libssm.so -lmmdb2 -lccp4c -lm make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_test "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j20 check "TESTSUITEFLAGS=-j20 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' create-stamp debian/debhelper-build-stamp dh_testroot "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_prep "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_auto_install "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j1 install DESTDIR=/build/reproducible-path/ssm-1.4.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ./libtool --mode=install /usr/bin/install -c libssm.la '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libssm.so.2.0.0 /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.so.2.0.0 libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so.2 || { rm -f libssm.so.2 && ln -s libssm.so.2.0.0 libssm.so.2; }; }) libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.2.0.0 libssm.so; }; }) libtool: install: /usr/bin/install -c .libs/libssm.lai /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.la libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' /bin/bash ./libtool --mode=install /usr/bin/install -c superpose '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' libtool: warning: 'libssm.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/superpose /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin/superpose /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 ssm.pc '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' /usr/bin/install -c -m 644 ssm/ssm_superpose.h ssm/ssm_csia.h ssm/ssm_vxedge.h ssm/ssm_align.h ssm/ssm_malign.h ssm/ssm_graph.h ssm/ssm_defs.h '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_install find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_installdocs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installchangelogs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installman "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installsystemduser "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_perl "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_link "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip_nondeterminism "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_compress "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_fixperms "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_missing "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_dwz -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_makeshlibs -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_shlibdeps -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installdeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_gencontrol "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_md5sums "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_builddeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dpkg-deb: building package 'libssm2' in '../libssm2_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin' in '../libssm-bin_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin-dbgsym' in '../libssm-bin-dbgsym_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-dev' in '../libssm-dev_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm2-dbgsym' in '../libssm2-dbgsym_1.4.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../ssm_1.4.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../ssm_1.4.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3882608 and its subdirectories I: Current time: Sat Feb 22 08:34:52 -12 2025 I: pbuilder-time-stamp: 1740256492 Sat Feb 22 20:34:53 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Sat Feb 22 20:34:53 UTC 2025 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Sat Feb 22 20:34:53 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Sat Feb 22 20:34:53 UTC 2025 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-HUQJqx' ==================================================================================== Sat Mar 28 02:57:54 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos5-amd64, called using "2 ssm unstable /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk 1.4.0-2" as arguments. Sat Mar 28 02:57:54 UTC 2026 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-sItBnMS3" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Mar 28 02:57:54 UTC 2026 I: Downloading source for unstable/ssm=1.4.0-2 Reading package lists... NOTICE: 'ssm' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/ssm.git Please use: git clone https://salsa.debian.org/science-team/ssm.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 437 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (dsc) [2080 B] Get:2 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (tar) [432 kB] Get:3 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (diff) [3492 B] Fetched 437 kB in 0s (17.0 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'ssm' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/ssm.git Please use: git clone https://salsa.debian.org/science-team/ssm.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 437 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (dsc) [2080 B] Get:2 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (tar) [432 kB] Get:3 http://deb.debian.org/debian unstable/main ssm 1.4.0-2 (diff) [3492 B] Fetched 437 kB in 0s (17.0 MB/s) Download complete and in download only mode ============================================================================= Re-Building ssm in unstable on amd64 on ionos5-amd64 now. Date: Sat Mar 28 02:57:54 UTC 2026 Date UTC: Sat Mar 28 02:57:54 UTC 2026 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_qZgn + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' ssm = debian-installer -o ssm = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' ssm = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_qZgn --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2 --logfile b2/build.log ssm_1.4.0-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Mar 28 16:57:55 +14 2026 I: pbuilder-time-stamp: 1774666675 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ssm_1.4.0-2.dsc] I: copying [./ssm_1.4.0.orig.tar.gz] I: copying [./ssm_1.4.0-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./ssm_1.4.0-2.dsc: unsupported subcommand dpkg-source: info: extracting ssm in ssm-1.4.0 dpkg-source: info: unpacking ssm_1.4.0.orig.tar.gz dpkg-source: info: unpacking ssm_1.4.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D01_modify_environment starting debug: Running on ionos5-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Mar 28 02:58 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=d604f6fbe95545b2b297caf397f3cf5c LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1660346 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_qZgn --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2 --logfile b2/build.log ssm_1.4.0-2.dsc' SUDO_GID=110 SUDO_UID=105 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libccp4-dev, libmmdb2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19775 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libccp4-dev; however: Package libccp4-dev is not installed. pbuilder-satisfydepends-dummy depends on libmmdb2-dev; however: Package libmmdb2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libmmdb2-0{a} libmmdb2-dev{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 22.2 MB of archives. After unpacking 85.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-4 [92.4 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-3 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libccp4-data all 8.0.0-4 [62.7 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libccp4c0t64 amd64 8.0.0-4 [89.9 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libmmdb2-0 amd64 2.0.22-1+b2 [342 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libccp4f0t64 amd64 8.0.0-4 [208 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libccp4-dev amd64 8.0.0-4 [42.9 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libmmdb2-dev amd64 2.0.22-1+b2 [92.9 kB] Fetched 22.2 MB in 5s (4510 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19775 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-4_amd64.deb ... Unpacking bsdextrautils (2.40.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-5_amd64.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../24-libicu72_72.1-6_amd64.deb ... Unpacking libicu72:amd64 (72.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package libccp4-data. Preparing to unpack .../30-libccp4-data_8.0.0-4_all.deb ... Unpacking libccp4-data (8.0.0-4) ... Selecting previously unselected package libccp4c0t64:amd64. Preparing to unpack .../31-libccp4c0t64_8.0.0-4_amd64.deb ... Unpacking libccp4c0t64:amd64 (8.0.0-4) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../32-libgfortran5_14.2.0-17_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-17) ... Selecting previously unselected package libmmdb2-0:amd64. Preparing to unpack .../33-libmmdb2-0_2.0.22-1+b2_amd64.deb ... Unpacking libmmdb2-0:amd64 (2.0.22-1+b2) ... Selecting previously unselected package libccp4f0t64:amd64. Preparing to unpack .../34-libccp4f0t64_8.0.0-4_amd64.deb ... Unpacking libccp4f0t64:amd64 (8.0.0-4) ... Selecting previously unselected package libccp4-dev:amd64. Preparing to unpack .../35-libccp4-dev_8.0.0-4_amd64.deb ... Unpacking libccp4-dev:amd64 (8.0.0-4) ... Selecting previously unselected package libmmdb2-dev. Preparing to unpack .../36-libmmdb2-dev_2.0.22-1+b2_amd64.deb ... Unpacking libmmdb2-dev (2.0.22-1+b2) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-6) ... Setting up bsdextrautils (2.40.4-4) ... Setting up libmmdb2-0:amd64 (2.0.22-1+b2) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libccp4-data (8.0.0-4) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up libmmdb2-dev (2.0.22-1+b2) ... Setting up autopoint (0.23.1-1) ... Setting up libgfortran5:amd64 (14.2.0-17) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libccp4c0t64:amd64 (8.0.0-4) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-3) ... Setting up libccp4f0t64:amd64 (8.0.0-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libccp4-dev:amd64 (8.0.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Processing triggers for libc-bin (2.40-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/ssm-1.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ssm_1.4.0-2_source.changes dpkg-buildpackage: info: source package ssm dpkg-buildpackage: info: source version 1.4.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_autoreconf_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_clean "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" debian/rules binary dh binary --ddeb-migration='libssm1-dbg (<< 1.4.0-1~)' dh_update_autotools_config "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_autoreconf "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:40: warning: AC_OUTPUT should be used without arguments. configure.ac:40: You should run autoupdate. configure.ac:11: installing 'build-aux/compile' configure.ac:8: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_auto_configure -- --enable-superpose --enable-ccp4 --disable-static --enable-shared ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-superpose --enable-ccp4 --disable-static --enable-shared checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for library containing cos... -lm checking for MMDB_CCIF_Init in -lmmdb2... yes checking for mmdb2/mmdb_manager.h... yes checking for ccp4_banner in -lccp4c... yes checking for ccp4/ccp4_general.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating ssm.pc config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_build "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j42 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make all-am make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-superpose.o `test -f 'superpose.cpp' || echo './'`superpose.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_pairwise.o `test -f 'sup_pairwise.cpp' || echo './'`sup_pairwise.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_multiple.o `test -f 'sup_multiple.cpp' || echo './'`sup_multiple.cpp /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_superpose.lo ssm/ssm_superpose.cpp /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_csia.lo ssm/ssm_csia.cpp /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_vxedge.lo ssm/ssm_vxedge.cpp /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_align.lo ssm/ssm_align.cpp /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_malign.lo ssm/ssm_malign.cpp /bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_graph.lo ssm/ssm_graph.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_align.cpp -fPIC -DPIC -o ssm/.libs/ssm_align.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_csia.cpp -fPIC -DPIC -o ssm/.libs/ssm_csia.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_malign.cpp -fPIC -DPIC -o ssm/.libs/ssm_malign.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_superpose.cpp -fPIC -DPIC -o ssm/.libs/ssm_superpose.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_vxedge.cpp -fPIC -DPIC -o ssm/.libs/ssm_vxedge.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_graph.cpp -fPIC -DPIC -o ssm/.libs/ssm_graph.o superpose.cpp:117:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:117:27: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ superpose.cpp:298:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ superpose.cpp:298:37: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ ssm/ssm_csia.cpp: In member function 'void ssm::GraphMatch::FreeMemory()': ssm/ssm_csia.cpp:290:21: warning: 'void operator delete [](void*)' called on pointer '*' with nonzero offset 8 [-Wfree-nonheap-object] 290 | delete[] P[i]; | ^ /bin/sh ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -no-undefined -version-info 2:0:0 -Wl,-z,relro -o libssm.la -rpath /usr/lib/x86_64-linux-gnu ssm/ssm_superpose.lo ssm/ssm_csia.lo ssm/ssm_vxedge.lo ssm/ssm_align.lo ssm/ssm_malign.lo ssm/ssm_graph.lo -lmmdb2 -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o ssm/.libs/ssm_superpose.o ssm/.libs/ssm_csia.o ssm/.libs/ssm_vxedge.o ssm/.libs/ssm_align.o ssm/.libs/ssm_malign.o ssm/.libs/ssm_graph.o -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-soname -Wl,libssm.so.2 -o .libs/libssm.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libssm.so.2" && ln -s "libssm.so.2.0.0" "libssm.so.2") libtool: link: (cd ".libs" && rm -f "libssm.so" && ln -s "libssm.so.2.0.0" "libssm.so") libtool: link: ( cd ".libs" && rm -f "libssm.la" && ln -s "../libssm.la" "libssm.la" ) /bin/sh ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z,relro -o superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o libssm.la -lmmdb2 -lccp4c -lm libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z -Wl,relro -o .libs/superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o ./.libs/libssm.so -lmmdb2 -lccp4c -lm make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_test "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j42 check "TESTSUITEFLAGS=-j42 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' create-stamp debian/debhelper-build-stamp dh_testroot "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_prep "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_auto_install "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" make -j1 install DESTDIR=/build/reproducible-path/ssm-1.4.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/sh ./libtool --mode=install /usr/bin/install -c libssm.la '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libssm.so.2.0.0 /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.so.2.0.0 libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so.2 || { rm -f libssm.so.2 && ln -s libssm.so.2.0.0 libssm.so.2; }; }) libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.2.0.0 libssm.so; }; }) libtool: install: /usr/bin/install -c .libs/libssm.lai /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.la libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' /bin/sh ./libtool --mode=install /usr/bin/install -c superpose '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' libtool: warning: 'libssm.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/superpose /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin/superpose /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 ssm.pc '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' /usr/bin/install -c -m 644 ssm/ssm_superpose.h ssm/ssm_csia.h ssm/ssm_vxedge.h ssm/ssm_align.h ssm/ssm_malign.h ssm/ssm_graph.h ssm/ssm_defs.h '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/include/ssm' make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' dh_install find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_installdocs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installchangelogs "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installman "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installsystemduser "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_perl "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_link "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip_nondeterminism "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_compress "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_fixperms "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_missing "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_dwz -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_strip -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_makeshlibs -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_shlibdeps -a "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_installdeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_gencontrol "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_md5sums "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_builddeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dpkg-deb: building package 'libssm-dev' in '../libssm-dev_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin' in '../libssm-bin_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin-dbgsym' in '../libssm-bin-dbgsym_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm2' in '../libssm2_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm2-dbgsym' in '../libssm2-dbgsym_1.4.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../ssm_1.4.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../ssm_1.4.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1660346 and its subdirectories I: Current time: Sat Mar 28 16:59:45 +14 2026 I: pbuilder-time-stamp: 1774666785 + false + set +x Sat Mar 28 02:59:45 UTC 2026 I: Signing ./b2/ssm_1.4.0-2_amd64.buildinfo as ssm_1.4.0-2_amd64.buildinfo.asc Sat Mar 28 02:59:45 UTC 2026 I: Signed ./b2/ssm_1.4.0-2_amd64.buildinfo as ./b2/ssm_1.4.0-2_amd64.buildinfo.asc Sat Mar 28 02:59:45 UTC 2026 - build #2 for ssm/unstable/amd64 on ionos5-amd64 done. Starting cleanup. All cleanup done. Sat Mar 28 02:59:45 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-sItBnMS3, removing. /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk: total 56 drwxr-xr-x 2 jenkins jenkins 4096 Feb 22 20:34 b1 drwxr-xr-x 2 jenkins jenkins 4096 Feb 22 20:36 b2 -rw------- 1 jenkins jenkins 42675 Feb 22 20:34 rbuildlog.EUttLsJ -rw-r--r-- 1 jenkins jenkins 2080 Nov 18 2020 ssm_1.4.0-2.dsc /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1: total 420 -rw-r--r-- 1 jenkins jenkins 39234 Feb 22 20:34 build.log -rw-r--r-- 1 jenkins jenkins 29708 Feb 22 20:34 libssm-bin-dbgsym_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 13464 Feb 22 20:34 libssm-bin_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 14876 Feb 22 20:34 libssm-dev_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 194872 Feb 22 20:34 libssm2-dbgsym_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 83624 Feb 22 20:34 libssm2_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 3492 Feb 22 20:34 ssm_1.4.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2080 Feb 22 20:34 ssm_1.4.0-2.dsc -rw-r--r-- 1 jenkins jenkins 5845 Feb 22 20:34 ssm_1.4.0-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6727 Feb 22 20:34 ssm_1.4.0-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2658 Feb 22 20:34 ssm_1.4.0-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1514 Feb 22 20:34 ssm_1.4.0-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2: total 416 -rw-r--r-- 1 jenkins jenkins 41156 Feb 22 20:36 build.log -rw-r--r-- 1 jenkins jenkins 29708 Feb 22 20:36 libssm-bin-dbgsym_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 13464 Feb 22 20:36 libssm-bin_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 14876 Feb 22 20:36 libssm-dev_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 194872 Feb 22 20:36 libssm2-dbgsym_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 83624 Feb 22 20:36 libssm2_1.4.0-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 3492 Feb 22 20:36 ssm_1.4.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2080 Feb 22 20:36 ssm_1.4.0-2.dsc -rw-r--r-- 1 jenkins jenkins 5854 Feb 22 20:36 ssm_1.4.0-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6736 Feb 22 20:36 ssm_1.4.0-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2658 Feb 22 20:36 ssm_1.4.0-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1514 Feb 22 20:36 ssm_1.4.0-2_source.changes Sat Feb 22 20:36:45 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Sat Feb 22 20:36:46 UTC 2025 I: ssm_1.4.0-2_amd64.changes: Format: 1.8 Date: Wed, 18 Nov 2020 08:38:38 +0100 Source: ssm Binary: libssm-bin libssm-bin-dbgsym libssm-dev libssm2 libssm2-dbgsym Architecture: amd64 Version: 1.4.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andreas Tille Description: libssm-bin - macromolecular superposition library - binaries libssm-dev - macromolecular superposition library - development files libssm2 - macromolecular superposition library - runtime Changes: ssm (1.4.0-2) unstable; urgency=medium . * Team upload. . [ Picca Frédéric-Emmanuel ] * Use debhelper-compat instead of debian/compat. . [ Andreas Tille ] * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * watch file standard 4 (routine-update) * Remove *.la file from install dir to keep dh_missing happy Checksums-Sha1: 33c2b7d3d3f94b789df2b93a9d311c9b9f5ab90f 29708 libssm-bin-dbgsym_1.4.0-2_amd64.deb 3fefd9fdae74827e2906ea8680872eca1c87be4b 13464 libssm-bin_1.4.0-2_amd64.deb a25a36cc9f95e42c02b6871eba78cc4b365b5c33 14876 libssm-dev_1.4.0-2_amd64.deb d26d95bf7f3c77882b6f29b087d4ec5065254ada 194872 libssm2-dbgsym_1.4.0-2_amd64.deb fb8040817dbe145bd4fb3fcdd9fb1c11288ab711 83624 libssm2_1.4.0-2_amd64.deb b5dbe3ba3bb3d071e0a48273b545349972fc45ca 5845 ssm_1.4.0-2_amd64.buildinfo Checksums-Sha256: 96011e10c07f91ef021988b03ba4f9b1cc11d8b58b5b8ce835dbfc19fa3ebb04 29708 libssm-bin-dbgsym_1.4.0-2_amd64.deb a7984b40e50a1be6860ecbeee6988f57a65eb9adc5048ea88df2e202d41efccf 13464 libssm-bin_1.4.0-2_amd64.deb 112dc0dac22b711dc279eec5227d9497d83e47db56d2e66974a4c30dba6c2276 14876 libssm-dev_1.4.0-2_amd64.deb 3469472af2cbe16d10b015ccbb829c9a674019a6986b7b2b5eaa6c9f957c2929 194872 libssm2-dbgsym_1.4.0-2_amd64.deb d0cbcabeb287821ee63d3c5afbe8fc2d4fe158a53e032ac58dd6d523f4658063 83624 libssm2_1.4.0-2_amd64.deb fc765d8666613369e7760971fe4ab20355e7a73c7fa66e849f8e02be041943ef 5845 ssm_1.4.0-2_amd64.buildinfo Files: d951477df30cacb74392061f308b4632 29708 debug optional libssm-bin-dbgsym_1.4.0-2_amd64.deb 5996847e527e83e29c9cca44cccd6505 13464 science optional libssm-bin_1.4.0-2_amd64.deb f47d661d11148f5b4695a0f369b5ded8 14876 libdevel optional libssm-dev_1.4.0-2_amd64.deb fb288f8e07517d43e515835e36df7673 194872 debug optional libssm2-dbgsym_1.4.0-2_amd64.deb 558a9e803dc82079fab5643babd73eb2 83624 libs optional libssm2_1.4.0-2_amd64.deb 9e3e8a7bc9cb5abf4dae69504ed44164 5845 science optional ssm_1.4.0-2_amd64.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/ssm_1.4.0-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/ssm_1.4.0-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/ssm_1.4.0-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/ssm_1.4.0-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/amd64/ssm_1.4.0-2_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/ssm_1.4.0-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-02-22 20:34:53.041253706 +0000 +++ b2/build.log 2025-02-22 20:36:45.944134668 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Feb 22 08:31:08 -12 2025 -I: pbuilder-time-stamp: 1740256268 +I: Current time: Sat Mar 28 16:57:55 +14 2026 +I: pbuilder-time-stamp: 1774666675 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -22,52 +22,84 @@ dpkg-source: info: unpacking ssm_1.4.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3882608/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 28 02:58 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='96526f66647c4b1799a315c722ecffa7' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3882608' - PS1='# ' - PS2='> ' + INVOCATION_ID=d604f6fbe95545b2b297caf397f3cf5c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1660346 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_iND7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1 --logfile b1/build.log ssm_1.4.0-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/pbuilderrc_qZgn --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2 --logfile b2/build.log ssm_1.4.0-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3882608/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -144,7 +176,7 @@ Get: 35 http://deb.debian.org/debian unstable/main amd64 libccp4f0t64 amd64 8.0.0-4 [208 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libccp4-dev amd64 8.0.0-4 [42.9 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libmmdb2-dev amd64 2.0.22-1+b2 [92.9 kB] -Fetched 22.2 MB in 1s (23.3 MB/s) +Fetched 22.2 MB in 5s (4510 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19775 files and directories currently installed.) @@ -307,7 +339,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ssm-1.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ssm_1.4.0-2_source.changes +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ssm-1.4.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ssm_1.4.0-2_source.changes dpkg-buildpackage: info: source package ssm dpkg-buildpackage: info: source version 1.4.0-2 dpkg-buildpackage: info: source distribution unstable @@ -450,19 +486,25 @@ config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_build "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" - make -j20 + make -j42 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make all-am make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-superpose.o `test -f 'superpose.cpp' || echo './'`superpose.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_pairwise.o `test -f 'sup_pairwise.cpp' || echo './'`sup_pairwise.cpp g++ -DHAVE_CONFIG_H -I. -D_ccp4_ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o superpose-sup_multiple.o `test -f 'sup_multiple.cpp' || echo './'`sup_multiple.cpp -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_superpose.lo ssm/ssm_superpose.cpp -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_csia.lo ssm/ssm_csia.cpp -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_vxedge.lo ssm/ssm_vxedge.cpp -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_align.lo ssm/ssm_align.cpp -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_malign.lo ssm/ssm_malign.cpp -/bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_graph.lo ssm/ssm_graph.cpp +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_superpose.lo ssm/ssm_superpose.cpp +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_csia.lo ssm/ssm_csia.cpp +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_vxedge.lo ssm/ssm_vxedge.cpp +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_align.lo ssm/ssm_align.cpp +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_malign.lo ssm/ssm_malign.cpp +/bin/sh ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c -o ssm/ssm_graph.lo ssm/ssm_graph.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_align.cpp -fPIC -DPIC -o ssm/.libs/ssm_align.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_csia.cpp -fPIC -DPIC -o ssm/.libs/ssm_csia.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_malign.cpp -fPIC -DPIC -o ssm/.libs/ssm_malign.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_superpose.cpp -fPIC -DPIC -o ssm/.libs/ssm_superpose.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_vxedge.cpp -fPIC -DPIC -o ssm/.libs/ssm_vxedge.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_graph.cpp -fPIC -DPIC -o ssm/.libs/ssm_graph.o superpose.cpp:117:5: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 117 | " v."superpose_version" from "superpose_date" built with SSM v.%i.%i.%i, " | ^ @@ -475,27 +517,21 @@ superpose.cpp:298:37: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] 298 | " Superpose v."superpose_version" from "superpose_date" " | ^ -libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_csia.cpp -fPIC -DPIC -o ssm/.libs/ssm_csia.o -libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_vxedge.cpp -fPIC -DPIC -o ssm/.libs/ssm_vxedge.o -libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_graph.cpp -fPIC -DPIC -o ssm/.libs/ssm_graph.o -libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_malign.cpp -fPIC -DPIC -o ssm/.libs/ssm_malign.o -libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_superpose.cpp -fPIC -DPIC -o ssm/.libs/ssm_superpose.o -libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -c ssm/ssm_align.cpp -fPIC -DPIC -o ssm/.libs/ssm_align.o ssm/ssm_csia.cpp: In member function 'void ssm::GraphMatch::FreeMemory()': ssm/ssm_csia.cpp:290:21: warning: 'void operator delete [](void*)' called on pointer '*' with nonzero offset 8 [-Wfree-nonheap-object] 290 | delete[] P[i]; | ^ -/bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -no-undefined -version-info 2:0:0 -Wl,-z,relro -o libssm.la -rpath /usr/lib/x86_64-linux-gnu ssm/ssm_superpose.lo ssm/ssm_csia.lo ssm/ssm_vxedge.lo ssm/ssm_align.lo ssm/ssm_malign.lo ssm/ssm_graph.lo -lmmdb2 -lm +/bin/sh ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -no-undefined -version-info 2:0:0 -Wl,-z,relro -o libssm.la -rpath /usr/lib/x86_64-linux-gnu ssm/ssm_superpose.lo ssm/ssm_csia.lo ssm/ssm_vxedge.lo ssm/ssm_align.lo ssm/ssm_malign.lo ssm/ssm_graph.lo -lmmdb2 -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/14/crtbeginS.o ssm/.libs/ssm_superpose.o ssm/.libs/ssm_csia.o ssm/.libs/ssm_vxedge.o ssm/.libs/ssm_align.o ssm/.libs/ssm_malign.o ssm/.libs/ssm_graph.o -lmmdb2 -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/14/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/14/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/14/../../../x86_64-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-soname -Wl,libssm.so.2 -o .libs/libssm.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libssm.so.2" && ln -s "libssm.so.2.0.0" "libssm.so.2") libtool: link: (cd ".libs" && rm -f "libssm.so" && ln -s "libssm.so.2.0.0" "libssm.so") libtool: link: ( cd ".libs" && rm -f "libssm.la" && ln -s "../libssm.la" "libssm.la" ) -/bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z,relro -o superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o libssm.la -lmmdb2 -lccp4c -lm +/bin/sh ./libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z,relro -o superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o libssm.la -lmmdb2 -lccp4c -lm libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/ssm-1.4.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -D_REENTRANT -Wl,-z -Wl,relro -o .libs/superpose superpose-superpose.o superpose-sup_pairwise.o superpose-sup_multiple.o ./.libs/libssm.so -lmmdb2 -lccp4c -lm make[2]: Leaving directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' dh_auto_test "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" - make -j20 check "TESTSUITEFLAGS=-j20 --verbose" VERBOSE=1 + make -j42 check "TESTSUITEFLAGS=-j42 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[1]: Leaving directory '/build/reproducible-path/ssm-1.4.0' create-stamp debian/debhelper-build-stamp @@ -506,14 +542,14 @@ make[1]: Entering directory '/build/reproducible-path/ssm-1.4.0' make[2]: Entering directory '/build/reproducible-path/ssm-1.4.0' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' - /bin/bash ./libtool --mode=install /usr/bin/install -c libssm.la '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' + /bin/sh ./libtool --mode=install /usr/bin/install -c libssm.la '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libssm.so.2.0.0 /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.so.2.0.0 libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so.2 || { rm -f libssm.so.2 && ln -s libssm.so.2.0.0 libssm.so.2; }; }) libtool: install: (cd /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libssm.so.2.0.0 libssm.so || { rm -f libssm.so && ln -s libssm.so.2.0.0 libssm.so; }; }) libtool: install: /usr/bin/install -c .libs/libssm.lai /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/libssm.la libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' - /bin/bash ./libtool --mode=install /usr/bin/install -c superpose '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' + /bin/sh ./libtool --mode=install /usr/bin/install -c superpose '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin' libtool: warning: 'libssm.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/superpose /build/reproducible-path/ssm-1.4.0/debian/tmp/usr/bin/superpose /usr/bin/mkdir -p '/build/reproducible-path/ssm-1.4.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' @@ -545,10 +581,10 @@ dh_gencontrol "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_md5sums "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" dh_builddeb "-O--ddeb-migration=libssm1-dbg (<< 1.4.0-1~)" -dpkg-deb: building package 'libssm2' in '../libssm2_1.4.0-2_amd64.deb'. +dpkg-deb: building package 'libssm-dev' in '../libssm-dev_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin' in '../libssm-bin_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm-bin-dbgsym' in '../libssm-bin-dbgsym_1.4.0-2_amd64.deb'. -dpkg-deb: building package 'libssm-dev' in '../libssm-dev_1.4.0-2_amd64.deb'. +dpkg-deb: building package 'libssm2' in '../libssm2_1.4.0-2_amd64.deb'. dpkg-deb: building package 'libssm2-dbgsym' in '../libssm2-dbgsym_1.4.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../ssm_1.4.0-2_amd64.buildinfo dpkg-genchanges --build=binary -O../ssm_1.4.0-2_amd64.changes @@ -557,12 +593,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1660346/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3882608 and its subdirectories -I: Current time: Sat Feb 22 08:34:52 -12 2025 -I: pbuilder-time-stamp: 1740256492 +I: removing directory /srv/workspace/pbuilder/1660346 and its subdirectories +I: Current time: Sat Mar 28 16:59:45 +14 2026 +I: pbuilder-time-stamp: 1774666785 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/ssm_1.4.0-2.diff: 80.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/ssm_1.4.0-2.diff.gz b2/build.log: 78.4% -- replaced with stdout Compressing the 1st log... b1/build.log: 79.0% -- replaced with stdout Sat Feb 22 20:36:47 UTC 2025 I: diffoscope 288 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_ssm_unstable_amd64_1740256607 + touch /var/log/reproducible-builds/diffoscope_stamp_ssm_unstable_amd64_1740256607 + RESULT=0 + systemd-run '--description=diffoscope on ssm/1.4.0-2 in unstable/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_21-31937 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk --run-session -c jenkins-reproducible-unstable-diffoscope-c9ff2416-8100-4838-89c4-bec4dc987efd -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/dbd-tmp-6hMxFZw ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/ssm_1.4.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/ssm_1.4.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/ssm_1.4.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1/ssm_1.4.0-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2/ssm_1.4.0-2_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_21-31937.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/ssm_1.4.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/ssm_1.4.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/ssm_1.4.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b1/ssm_1.4.0-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.ZODXPMfk/b2/ssm_1.4.0-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 224ms CPU time consumed: 224ms ___ ___ _ __ ___ / __/ __| '_ ` _ \ \__ \__ \ | | | | | |___/___/_| |_| |_| Sat Feb 22 20:36:47 UTC 2025 I: diffoscope 288 found no differences in the changes files, and a .buildinfo file also exists. Sat Feb 22 20:36:47 UTC 2025 I: ssm from unstable built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-02-22 20:36:48] INFO: Starting at 2025-02-22 20:36:48.535563 [2025-02-22 20:36:48] INFO: Generating the pages of 1 package(s) [2025-02-22 20:36:48] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/ssm didn't produce a buildlog, even though it has been built. [2025-02-22 20:36:48] INFO: Finished at 2025-02-22 20:36:48.993337, took: 0:00:00.457782 Sat Feb 22 20:36:49 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/ssm.html Sat Feb 22 20:36:49 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Feb 22 20:36:49 UTC 2025 I: Submitting 8.0K b1/ssm_1.4.0-2_amd64.buildinfo.asc https://buildinfo.debian.net/b5dbe3ba3bb3d071e0a48273b545349972fc45ca/ssm_1.4.0-2_amd64 Sat Feb 22 20:36:49 UTC 2025 I: Submitting 8.0K b2/ssm_1.4.0-2_amd64.buildinfo.asc https://buildinfo.debian.net/7e9278281eda154521c0f552f87a8e64a0454795/ssm_1.4.0-2_amd64 Sat Feb 22 20:36:50 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Feb 22 20:36:50 UTC 2025 I: Done submitting .buildinfo files. Sat Feb 22 20:36:50 UTC 2025 I: Removing signed ssm_1.4.0-2_amd64.buildinfo.asc files: removed './b1/ssm_1.4.0-2_amd64.buildinfo.asc' removed './b2/ssm_1.4.0-2_amd64.buildinfo.asc' 1740256610 amd64 unstable ssm Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/ssm_1.4.0-2.rbuild.log: 75.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/ssm_1.4.0-2.rbuild.log.gz [2025-02-22 20:36:51] INFO: Starting at 2025-02-22 20:36:51.032131 [2025-02-22 20:36:51] INFO: Generating the pages of 1 package(s) [2025-02-22 20:36:51] INFO: Finished at 2025-02-22 20:36:51.523748, took: 0:00:00.491627 All cleanup done. Sat Feb 22 20:36:51 UTC 2025 - total duration: 0h 5m 50s. Sat Feb 22 20:36:51 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-HH272ZMw, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 5min 54.369s CPU time consumed: 7.173s