Running as unit: rb-build-amd64_22-39835.service ==================================================================================== Fri Apr 25 21:56:58 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_22) on jenkins, called using "ionos5-amd64 ionos11-amd64" as arguments. Fri Apr 25 21:56:58 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-Dw6S8J0s" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Apr 25 21:56:58 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Fri Apr 25 21:56:58 UTC 2025 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-VYjVmB' Fri Apr 25 21:56:58 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Fri Apr 25 21:56:58 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-1vRePc' ok, let's check if pscan-tfbs is building anywhere yet… ok, pscan-tfbs is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of pscan-tfbs in trixie on amd64 on jenkins now. 1st build will be done on ionos5-amd64.debian.net. 2nd build will be done on ionos11-amd64.debian.net. ============================================================================= Fri Apr 25 21:57:18 UTC 2025 I: starting to build pscan-tfbs/trixie/amd64 on jenkins on '2025-04-25 21:56' Fri Apr 25 21:57:18 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_22/39835/console.log 1745618238 amd64 trixie pscan-tfbs Fri Apr 25 21:57:18 UTC 2025 I: Downloading source for trixie/pscan-tfbs=1.2.2-4 --2025-04-25 21:57:18-- http://deb.debian.org/debian/pool/main/p/pscan-tfbs/pscan-tfbs_1.2.2-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1993 (1.9K) [text/prs.lines.tag] Saving to: ‘pscan-tfbs_1.2.2-4.dsc’ 0K . 100% 226M=0s 2025-04-25 21:57:18 (226 MB/s) - ‘pscan-tfbs_1.2.2-4.dsc’ saved [1993/1993] --2025-04-25 21:57:18-- http://deb.debian.org/debian/pool/main/p/pscan-tfbs/pscan-tfbs_1.2.2-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1993 (1.9K) [text/prs.lines.tag] Saving to: ‘pscan-tfbs_1.2.2-4.dsc’ 0K . 100% 226M=0s 2025-04-25 21:57:18 (226 MB/s) - ‘pscan-tfbs_1.2.2-4.dsc’ saved [1993/1993] Fri Apr 25 21:57:18 UTC 2025 I: pscan-tfbs_1.2.2-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pscan-tfbs Binary: pscan-tfbs Architecture: any Version: 1.2.2-4 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: http://www.beaconlab.it/pscan Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/pscan-tfbs Vcs-Git: https://salsa.debian.org/med-team/pscan-tfbs.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libgsl-dev Package-List: pscan-tfbs deb science optional arch=any Checksums-Sha1: dc21000a65c639595f66fc4f53cab3a95b7646f6 42948 pscan-tfbs_1.2.2.orig.tar.gz 17410a19decdad961c643acc75593339859f0da4 7296 pscan-tfbs_1.2.2-4.debian.tar.xz Checksums-Sha256: b59cac9effcad6ab286372a95e81a57a226ceb2a4a267ffa93bc084467fdf92b 42948 pscan-tfbs_1.2.2.orig.tar.gz d45efb3f8ea4c1d60de052f82021b11045280e176e43640ed638b9e54aba777c 7296 pscan-tfbs_1.2.2-4.debian.tar.xz Files: 33d4f841fdcfadf63b238b61adc536a2 42948 pscan-tfbs_1.2.2.orig.tar.gz 9c5efe6f6e5270fbe5b52f1768fa595c 7296 pscan-tfbs_1.2.2-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl8z3tsUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafFWVw/9GWq30aaQHM62YZBx6XQU1/+OtFDz 1DOQGaJF5uGc0yPHuxhLCohGeuxXVpcq/6gQRN1MfNulE8Lopiu71xYQA+1mDOrH ioz5cVDfRjtpe0faNA3O2LhPg/8zUZGm/6XKPYYhrR+V+KIdunV0MGGOLG62Df0l Wy3UcnOmCKuYO/+dseocBM6nksYH08FnK6BMnX/RUbKYOivGoBTwfPpPhTwpHUAA wbNGoSQVYd270u535jPpygQ4BLSBrapcN69mPzgf2kE27BYqaNKxaRC/Q0bSpJSL mpFBmBdHrUOtJFS/DJJJC1ZhHrsX8LSbdqLSFpVZjFWGIaJ67RFI+D+XzKK4ZKvP FNGKmOeD6KChv0zwtWFK8b6nhtf6ss9Y1AXTC8H46AeRlRGkAuYsyxXCu8pD8yVQ G+xuVTR77zwtAfO+vwG1AjW5g60NvpFzU4gBnWlYUx1AU7IGstDcJUQHXO9vIbmk L1oqvvzQ1PprrsJevabePXdfVIUrOGl395I0R/OJ/4Czw2ENiS1RPJ2rzJ2gGvvf OdXa16AIwAeZulsFX8UeMCF/jmDTihujP5+DI4/OSHHDPEecuEXUMH6uXIM4/hVh orjplfBbI3g8mjQDebnbj+9vo4z6DsNkd+jq4C9vycxCRG9HLMOsjBWpWn2c3d8D 33W3ZoBWHVXi0sI= =B9cT -----END PGP SIGNATURE----- Fri Apr 25 21:57:18 UTC 2025 I: Checking whether the package is not for us Fri Apr 25 21:57:18 UTC 2025 I: Starting 1st build on remote node ionos5-amd64.debian.net. Fri Apr 25 21:57:18 UTC 2025 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Fri Apr 25 21:57:18 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos5-amd64.debian.net is marked as down. Fri Apr 25 21:57:18 UTC 2025 - checking via ssh if ionos5-amd64.debian.net is up. removed '/tmp/read-only-fs-test-2kGkSh' ==================================================================================== Fri May 29 04:20:19 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos5-amd64, called using "1 pscan-tfbs trixie /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH 1.2.2-4" as arguments. Fri May 29 04:20:19 UTC 2026 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-VkaDSqhW" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri May 29 04:20:19 UTC 2026 I: Downloading source for trixie/pscan-tfbs=1.2.2-4 Reading package lists... NOTICE: 'pscan-tfbs' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pscan-tfbs.git Please use: git clone https://salsa.debian.org/med-team/pscan-tfbs.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 52.2 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (dsc) [1993 B] Get:2 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (tar) [42.9 kB] Get:3 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (diff) [7296 B] Fetched 52.2 kB in 0s (769 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'pscan-tfbs' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pscan-tfbs.git Please use: git clone https://salsa.debian.org/med-team/pscan-tfbs.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 52.2 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (dsc) [1993 B] Get:2 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (tar) [42.9 kB] Get:3 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (diff) [7296 B] Fetched 52.2 kB in 0s (769 kB/s) Download complete and in download only mode ============================================================================= Building pscan-tfbs in trixie on amd64 on ionos5-amd64 now. Date: Fri May 29 04:20:19 UTC 2026 Date UTC: Fri May 29 04:20:19 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu May 28 16:20:19 -12 2026 I: pbuilder-time-stamp: 1780028419 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pscan-tfbs_1.2.2-4.dsc] I: copying [./pscan-tfbs_1.2.2.orig.tar.gz] I: copying [./pscan-tfbs_1.2.2-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pscan-tfbs_1.2.2-4.dsc: unsupported subcommand dpkg-source: info: extracting pscan-tfbs in pscan-tfbs-1.2.2 dpkg-source: info: unpacking pscan-tfbs_1.2.2.orig.tar.gz dpkg-source: info: unpacking pscan-tfbs_1.2.2-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3627858/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='2ba25a1f29c44d7bba5a12b097a38b6e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3627858' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_VV9E --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1 --logfile b1/build.log pscan-tfbs_1.2.2-4.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3627858/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19840 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgsl-dev{a} libgsl28{a} libgslcblas0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 13.5 MB of archives. After unpacking 54.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.41-4 [94.6 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libgslcblas0 amd64 2.8+dfsg-5 [116 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libgsl28 amd64 2.8+dfsg-5 [994 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libgsl-dev amd64 2.8+dfsg-5 [1222 kB] Fetched 13.5 MB in 4s (3754 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19840 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_amd64.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_amd64.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... 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Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libgsl28:amd64 (2.8+dfsg-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libgsl-dev (2.8+dfsg-5) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pscan-tfbs-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pscan-tfbs_1.2.2-4_source.changes dpkg-buildpackage: info: source package pscan-tfbs dpkg-buildpackage: info: source version 1.2.2-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f pscan make[1]: Leaving directory '/build/reproducible-path/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/pscan-tfbs-1.2.2' x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pscan-tfbs-1.2.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto pscan.cpp -o pscan -Wl,-z,relro -Wl,-z,now -Wl,-flto -lgslcblas -lgsl pscan.cpp: In member function 'char query::comp_char(char)': pscan.cpp:4877:1: warning: control reaches end of non-void function [-Wreturn-type] 4877 | } | ^ lto-wrapper: warning: using serial compilation of 3 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information make[1]: Leaving directory '/build/reproducible-path/pscan-tfbs-1.2.2' create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/pscan-tfbs.substvars rm -fr -- debian/.debhelper/generated/pscan-tfbs/ debian/pscan-tfbs/ debian/tmp/ dh_auto_install --destdir=debian/pscan-tfbs/ install -m0755 -d /build/reproducible-path/pscan-tfbs-1.2.2/debian/pscan-tfbs dh_install install -m0755 -d debian/pscan-tfbs/usr/lib/debian-med/bin/ cp --reflink=auto -a ./pscan debian/pscan-tfbs/usr/lib/debian-med/bin// dh_installdocs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./HELP.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./REFERENCE.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs chmod -R u\+rw,go=rX debian/pscan-tfbs/usr/share/doc install -p -m0644 debian/README.Debian debian/pscan-tfbs/usr/share/doc/pscan-tfbs/README.Debian install -p -m0644 debian/copyright debian/pscan-tfbs/usr/share/doc/pscan-tfbs/copyright dh_installchangelogs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs install -p -m0644 debian/.debhelper/generated/pscan-tfbs/dh_installchangelogs.dch.trimmed debian/pscan-tfbs/usr/share/doc/pscan-tfbs/changelog.Debian dh_installexamples install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./example_matrix_file.wil debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./debian/tests/sample.fasta debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples dh_installman install -m0755 -d debian/pscan-tfbs/usr/share/man/man1/ install -p -m0644 ./debian/pscan-tfbs.1 debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 man-recode --to-code UTF-8 --suffix .dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 mv debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1.dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 chmod 0644 -- debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 dh_perl dh_link install -m0755 -d debian/pscan-tfbs/usr/lib/debian-med/share/man/man1 rm -f debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz ln -s ../../../../../share/man/man1/pscan-tfbs.1.gz debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz install -m0755 -d debian/pscan-tfbs/usr/bin rm -f debian/pscan-tfbs/usr/bin/pscan-tfbs ln -s ../lib/debian-med/bin/pscan debian/pscan-tfbs/usr/bin/pscan-tfbs dh_strip_nondeterminism dh_compress cd debian/pscan-tfbs chmod a-x usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 gzip -9nf usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 cd '/build/reproducible-path/pscan-tfbs-1.2.2' dh_fixperms find debian/pscan-tfbs ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/pscan-tfbs/usr/share/doc -type f -a -true -a ! -regex 'debian/pscan-tfbs/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/pscan-tfbs/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/pscan-tfbs/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz -a dwz -- debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dh_strip -a install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/pscan-tfbs/usr/lib/debian-med/bin/pscan debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug strip --remove-section=.comment --remove-section=.note debian/pscan-tfbs/usr/lib/debian-med/bin/pscan objcopy --add-gnu-debuglink debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug debian/pscan-tfbs/usr/lib/debian-med/bin/pscan install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc ln -s pscan-tfbs debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc/pscan-tfbs-dbgsym install -m0755 -d debian/.debhelper/pscan-tfbs dh_makeshlibs -a rm -f debian/pscan-tfbs/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/pscan-tfbs/DEBIAN dpkg-shlibdeps -Tdebian/pscan-tfbs.substvars debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dh_installdeb install -m0755 -d debian/pscan-tfbs/DEBIAN dh_gencontrol install -m0755 -d debian/pscan-tfbs/DEBIAN echo misc:Depends= >> debian/pscan-tfbs.substvars echo misc:Pre-Depends= >> debian/pscan-tfbs.substvars install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -cdebian/control -Pdebian/.debhelper/pscan-tfbs/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=pscan-tfbs-dbgsym "-DDepends=pscan-tfbs (= \${binary:Version})" "-DDescription=debug symbols for pscan-tfbs" -DBuild-Ids=44eef59e16cd310852cfcace26ba48fdae6a6370 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -cdebian/control -Pdebian/pscan-tfbs chmod 0644 -- debian/pscan-tfbs/DEBIAN/control dh_md5sums install -m0755 -d debian/pscan-tfbs/DEBIAN cd debian/pscan-tfbs >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/pscan-tfbs/DEBIAN/md5sums install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN cd debian/.debhelper/pscan-tfbs/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/pscan-tfbs .. dpkg-deb --root-owner-group --build debian/.debhelper/pscan-tfbs/dbgsym-root .. dpkg-deb: building package 'pscan-tfbs-dbgsym' in '../pscan-tfbs-dbgsym_1.2.2-4_amd64.deb'. dpkg-deb: building package 'pscan-tfbs' in '../pscan-tfbs_1.2.2-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pscan-tfbs_1.2.2-4_amd64.buildinfo dpkg-genchanges --build=binary -O../pscan-tfbs_1.2.2-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3627858 and its subdirectories I: Current time: Thu May 28 16:21:12 -12 2026 I: pbuilder-time-stamp: 1780028472 Fri May 29 04:21:12 UTC 2026 I: Signing ./b1/pscan-tfbs_1.2.2-4_amd64.buildinfo as pscan-tfbs_1.2.2-4_amd64.buildinfo.asc Fri May 29 04:21:12 UTC 2026 I: Signed ./b1/pscan-tfbs_1.2.2-4_amd64.buildinfo as ./b1/pscan-tfbs_1.2.2-4_amd64.buildinfo.asc Fri May 29 04:21:12 UTC 2026 - build #1 for pscan-tfbs/trixie/amd64 on ionos5-amd64 done. Starting cleanup. All cleanup done. Fri May 29 04:21:12 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-VkaDSqhW, removing. /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Apr 25 21:58 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 25 21:57 b2 -rw-r--r-- 1 jenkins jenkins 1993 Aug 12 2020 pscan-tfbs_1.2.2-4.dsc -rw------- 1 jenkins jenkins 3110 Apr 25 21:57 rbuildlog.YWlITbg /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1: total 820 -rw-r--r-- 1 jenkins jenkins 26749 Apr 25 21:58 build.log -rw-r--r-- 1 jenkins jenkins 695204 Apr 25 21:58 pscan-tfbs-dbgsym_1.2.2-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 7296 Apr 25 21:58 pscan-tfbs_1.2.2-4.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1993 Apr 25 21:58 pscan-tfbs_1.2.2-4.dsc -rw-r--r-- 1 jenkins jenkins 4978 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5860 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1581 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.changes -rw-r--r-- 1 jenkins jenkins 76952 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 1438 Apr 25 21:58 pscan-tfbs_1.2.2-4_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2: total 0 Fri Apr 25 21:58:13 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu May 28 16:20:19 -12 2026 I: pbuilder-time-stamp: 1780028419 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pscan-tfbs_1.2.2-4.dsc] I: copying [./pscan-tfbs_1.2.2.orig.tar.gz] I: copying [./pscan-tfbs_1.2.2-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pscan-tfbs_1.2.2-4.dsc: unsupported subcommand dpkg-source: info: extracting pscan-tfbs in pscan-tfbs-1.2.2 dpkg-source: info: unpacking pscan-tfbs_1.2.2.orig.tar.gz dpkg-source: info: unpacking pscan-tfbs_1.2.2-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3627858/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='2ba25a1f29c44d7bba5a12b097a38b6e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3627858' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_VV9E --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1 --logfile b1/build.log pscan-tfbs_1.2.2-4.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3627858/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19840 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgsl-dev{a} libgsl28{a} libgslcblas0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 13.5 MB of archives. After unpacking 54.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.41-4 [94.6 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libgslcblas0 amd64 2.8+dfsg-5 [116 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libgsl28 amd64 2.8+dfsg-5 [994 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libgsl-dev amd64 2.8+dfsg-5 [1222 kB] Fetched 13.5 MB in 4s (3754 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19840 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_amd64.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_amd64.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libgslcblas0:amd64. Preparing to unpack .../29-libgslcblas0_2.8+dfsg-5_amd64.deb ... Unpacking libgslcblas0:amd64 (2.8+dfsg-5) ... Selecting previously unselected package libgsl28:amd64. Preparing to unpack .../30-libgsl28_2.8+dfsg-5_amd64.deb ... Unpacking libgsl28:amd64 (2.8+dfsg-5) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../31-libgsl-dev_2.8+dfsg-5_amd64.deb ... Unpacking libgsl-dev (2.8+dfsg-5) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41-4) ... Setting up libgslcblas0:amd64 (2.8+dfsg-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libgsl28:amd64 (2.8+dfsg-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libgsl-dev (2.8+dfsg-5) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pscan-tfbs-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pscan-tfbs_1.2.2-4_source.changes dpkg-buildpackage: info: source package pscan-tfbs dpkg-buildpackage: info: source version 1.2.2-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f pscan make[1]: Leaving directory '/build/reproducible-path/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/pscan-tfbs-1.2.2' x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pscan-tfbs-1.2.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto pscan.cpp -o pscan -Wl,-z,relro -Wl,-z,now -Wl,-flto -lgslcblas -lgsl pscan.cpp: In member function 'char query::comp_char(char)': pscan.cpp:4877:1: warning: control reaches end of non-void function [-Wreturn-type] 4877 | } | ^ lto-wrapper: warning: using serial compilation of 3 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information make[1]: Leaving directory '/build/reproducible-path/pscan-tfbs-1.2.2' create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/pscan-tfbs.substvars rm -fr -- debian/.debhelper/generated/pscan-tfbs/ debian/pscan-tfbs/ debian/tmp/ dh_auto_install --destdir=debian/pscan-tfbs/ install -m0755 -d /build/reproducible-path/pscan-tfbs-1.2.2/debian/pscan-tfbs dh_install install -m0755 -d debian/pscan-tfbs/usr/lib/debian-med/bin/ cp --reflink=auto -a ./pscan debian/pscan-tfbs/usr/lib/debian-med/bin// dh_installdocs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./HELP.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./REFERENCE.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs chmod -R u\+rw,go=rX debian/pscan-tfbs/usr/share/doc install -p -m0644 debian/README.Debian debian/pscan-tfbs/usr/share/doc/pscan-tfbs/README.Debian install -p -m0644 debian/copyright debian/pscan-tfbs/usr/share/doc/pscan-tfbs/copyright dh_installchangelogs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs install -p -m0644 debian/.debhelper/generated/pscan-tfbs/dh_installchangelogs.dch.trimmed debian/pscan-tfbs/usr/share/doc/pscan-tfbs/changelog.Debian dh_installexamples install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./example_matrix_file.wil debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./debian/tests/sample.fasta debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples dh_installman install -m0755 -d debian/pscan-tfbs/usr/share/man/man1/ install -p -m0644 ./debian/pscan-tfbs.1 debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 man-recode --to-code UTF-8 --suffix .dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 mv debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1.dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 chmod 0644 -- debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 dh_perl dh_link install -m0755 -d debian/pscan-tfbs/usr/lib/debian-med/share/man/man1 rm -f debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz ln -s ../../../../../share/man/man1/pscan-tfbs.1.gz debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz install -m0755 -d debian/pscan-tfbs/usr/bin rm -f debian/pscan-tfbs/usr/bin/pscan-tfbs ln -s ../lib/debian-med/bin/pscan debian/pscan-tfbs/usr/bin/pscan-tfbs dh_strip_nondeterminism dh_compress cd debian/pscan-tfbs chmod a-x usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 gzip -9nf usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 cd '/build/reproducible-path/pscan-tfbs-1.2.2' dh_fixperms find debian/pscan-tfbs ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/pscan-tfbs/usr/share/doc -type f -a -true -a ! -regex 'debian/pscan-tfbs/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/pscan-tfbs/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/pscan-tfbs/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz -a dwz -- debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dh_strip -a install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/pscan-tfbs/usr/lib/debian-med/bin/pscan debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug strip --remove-section=.comment --remove-section=.note debian/pscan-tfbs/usr/lib/debian-med/bin/pscan objcopy --add-gnu-debuglink debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug debian/pscan-tfbs/usr/lib/debian-med/bin/pscan install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc ln -s pscan-tfbs debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc/pscan-tfbs-dbgsym install -m0755 -d debian/.debhelper/pscan-tfbs dh_makeshlibs -a rm -f debian/pscan-tfbs/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/pscan-tfbs/DEBIAN dpkg-shlibdeps -Tdebian/pscan-tfbs.substvars debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dh_installdeb install -m0755 -d debian/pscan-tfbs/DEBIAN dh_gencontrol install -m0755 -d debian/pscan-tfbs/DEBIAN echo misc:Depends= >> debian/pscan-tfbs.substvars echo misc:Pre-Depends= >> debian/pscan-tfbs.substvars install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -cdebian/control -Pdebian/.debhelper/pscan-tfbs/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=pscan-tfbs-dbgsym "-DDepends=pscan-tfbs (= \${binary:Version})" "-DDescription=debug symbols for pscan-tfbs" -DBuild-Ids=44eef59e16cd310852cfcace26ba48fdae6a6370 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -cdebian/control -Pdebian/pscan-tfbs chmod 0644 -- debian/pscan-tfbs/DEBIAN/control dh_md5sums install -m0755 -d debian/pscan-tfbs/DEBIAN cd debian/pscan-tfbs >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/pscan-tfbs/DEBIAN/md5sums install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN cd debian/.debhelper/pscan-tfbs/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/pscan-tfbs .. dpkg-deb --root-owner-group --build debian/.debhelper/pscan-tfbs/dbgsym-root .. dpkg-deb: building package 'pscan-tfbs-dbgsym' in '../pscan-tfbs-dbgsym_1.2.2-4_amd64.deb'. dpkg-deb: building package 'pscan-tfbs' in '../pscan-tfbs_1.2.2-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pscan-tfbs_1.2.2-4_amd64.buildinfo dpkg-genchanges --build=binary -O../pscan-tfbs_1.2.2-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3627858 and its subdirectories I: Current time: Thu May 28 16:21:12 -12 2026 I: pbuilder-time-stamp: 1780028472 Fri Apr 25 21:58:14 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Fri Apr 25 21:58:14 UTC 2025 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Fri Apr 25 21:58:14 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Fri Apr 25 21:58:14 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-q4DpZ1' ==================================================================================== Fri Apr 25 21:58:15 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "2 pscan-tfbs trixie /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH 1.2.2-4" as arguments. Fri Apr 25 21:58:15 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-nes3csuQ" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Apr 25 21:58:15 UTC 2025 I: Downloading source for trixie/pscan-tfbs=1.2.2-4 Reading package lists... NOTICE: 'pscan-tfbs' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pscan-tfbs.git Please use: git clone https://salsa.debian.org/med-team/pscan-tfbs.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 52.2 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (dsc) [1993 B] Get:2 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (tar) [42.9 kB] Get:3 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (diff) [7296 B] Fetched 52.2 kB in 0s (1607 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'pscan-tfbs' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pscan-tfbs.git Please use: git clone https://salsa.debian.org/med-team/pscan-tfbs.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 52.2 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (dsc) [1993 B] Get:2 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (tar) [42.9 kB] Get:3 http://deb.debian.org/debian trixie/main pscan-tfbs 1.2.2-4 (diff) [7296 B] Fetched 52.2 kB in 0s (1607 kB/s) Download complete and in download only mode ============================================================================= Re-Building pscan-tfbs in trixie on amd64 on ionos11-amd64 now. Date: Fri Apr 25 21:58:16 UTC 2025 Date UTC: Fri Apr 25 21:58:16 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_mxzm + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' pscan-tfbs = debian-installer -o pscan-tfbs = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' pscan-tfbs = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_mxzm --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2 --logfile b2/build.log pscan-tfbs_1.2.2-4.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Apr 26 11:58:16 +14 2025 I: pbuilder-time-stamp: 1745618296 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pscan-tfbs_1.2.2-4.dsc] I: copying [./pscan-tfbs_1.2.2.orig.tar.gz] I: copying [./pscan-tfbs_1.2.2-4.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pscan-tfbs_1.2.2-4.dsc: unsupported subcommand dpkg-source: info: extracting pscan-tfbs in pscan-tfbs-1.2.2 dpkg-source: info: unpacking pscan-tfbs_1.2.2.orig.tar.gz dpkg-source: info: unpacking pscan-tfbs_1.2.2-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 25 21:58 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=e5a30b00f5c74df1bdb33780bf20970e LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3398173 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_mxzm --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2 --logfile b2/build.log pscan-tfbs_1.2.2-4.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19840 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgsl-dev{a} libgsl28{a} libgslcblas0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 13.5 MB of archives. After unpacking 54.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.41-4 [94.6 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-7 [294 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libgslcblas0 amd64 2.8+dfsg-5 [116 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libgsl28 amd64 2.8+dfsg-5 [994 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libgsl-dev amd64 2.8+dfsg-5 [1222 kB] Fetched 13.5 MB in 2s (8903 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19840 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_amd64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_amd64.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-7_amd64.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. 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Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-1_amd64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libgslcblas0:amd64. Preparing to unpack .../29-libgslcblas0_2.8+dfsg-5_amd64.deb ... Unpacking libgslcblas0:amd64 (2.8+dfsg-5) ... Selecting previously unselected package libgsl28:amd64. Preparing to unpack .../30-libgsl28_2.8+dfsg-5_amd64.deb ... Unpacking libgsl28:amd64 (2.8+dfsg-5) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../31-libgsl-dev_2.8+dfsg-5_amd64.deb ... Unpacking libgsl-dev (2.8+dfsg-5) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41-4) ... Setting up libgslcblas0:amd64 (2.8+dfsg-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libgsl28:amd64 (2.8+dfsg-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libgsl-dev (2.8+dfsg-5) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/pscan-tfbs-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pscan-tfbs_1.2.2-4_source.changes dpkg-buildpackage: info: source package pscan-tfbs dpkg-buildpackage: info: source version 1.2.2-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f pscan make[1]: Leaving directory '/build/reproducible-path/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/pscan-tfbs-1.2.2' x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pscan-tfbs-1.2.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto pscan.cpp -o pscan -Wl,-z,relro -Wl,-z,now -Wl,-flto -lgslcblas -lgsl pscan.cpp: In member function 'char query::comp_char(char)': pscan.cpp:4877:1: warning: control reaches end of non-void function [-Wreturn-type] 4877 | } | ^ lto-wrapper: warning: using serial compilation of 3 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information make[1]: Leaving directory '/build/reproducible-path/pscan-tfbs-1.2.2' create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/pscan-tfbs.substvars rm -fr -- debian/.debhelper/generated/pscan-tfbs/ debian/pscan-tfbs/ debian/tmp/ dh_auto_install --destdir=debian/pscan-tfbs/ install -m0755 -d /build/reproducible-path/pscan-tfbs-1.2.2/debian/pscan-tfbs dh_install install -m0755 -d debian/pscan-tfbs/usr/lib/debian-med/bin/ cp --reflink=auto -a ./pscan debian/pscan-tfbs/usr/lib/debian-med/bin// dh_installdocs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./HELP.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./REFERENCE.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs chmod -R u\+rw,go=rX debian/pscan-tfbs/usr/share/doc install -p -m0644 debian/README.Debian debian/pscan-tfbs/usr/share/doc/pscan-tfbs/README.Debian install -p -m0644 debian/copyright debian/pscan-tfbs/usr/share/doc/pscan-tfbs/copyright dh_installchangelogs install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs install -p -m0644 debian/.debhelper/generated/pscan-tfbs/dh_installchangelogs.dch.trimmed debian/pscan-tfbs/usr/share/doc/pscan-tfbs/changelog.Debian dh_installexamples install -m0755 -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./example_matrix_file.wil debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./debian/tests/sample.fasta debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples dh_installman install -m0755 -d debian/pscan-tfbs/usr/share/man/man1/ install -p -m0644 ./debian/pscan-tfbs.1 debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 man-recode --to-code UTF-8 --suffix .dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 mv debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1.dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 chmod 0644 -- debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 dh_perl dh_link install -m0755 -d debian/pscan-tfbs/usr/lib/debian-med/share/man/man1 rm -f debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz ln -s ../../../../../share/man/man1/pscan-tfbs.1.gz debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz install -m0755 -d debian/pscan-tfbs/usr/bin rm -f debian/pscan-tfbs/usr/bin/pscan-tfbs ln -s ../lib/debian-med/bin/pscan debian/pscan-tfbs/usr/bin/pscan-tfbs dh_strip_nondeterminism dh_compress cd debian/pscan-tfbs chmod a-x usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 gzip -9nf usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 cd '/build/reproducible-path/pscan-tfbs-1.2.2' dh_fixperms find debian/pscan-tfbs ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/pscan-tfbs/usr/share/doc -type f -a -true -a ! -regex 'debian/pscan-tfbs/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/pscan-tfbs/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/pscan-tfbs/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz -a dwz -- debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dh_strip -a install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/pscan-tfbs/usr/lib/debian-med/bin/pscan debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug strip --remove-section=.comment --remove-section=.note debian/pscan-tfbs/usr/lib/debian-med/bin/pscan objcopy --add-gnu-debuglink debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/44/eef59e16cd310852cfcace26ba48fdae6a6370.debug debian/pscan-tfbs/usr/lib/debian-med/bin/pscan install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc ln -s pscan-tfbs debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc/pscan-tfbs-dbgsym install -m0755 -d debian/.debhelper/pscan-tfbs dh_makeshlibs -a rm -f debian/pscan-tfbs/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/pscan-tfbs/DEBIAN dpkg-shlibdeps -Tdebian/pscan-tfbs.substvars debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dh_installdeb install -m0755 -d debian/pscan-tfbs/DEBIAN dh_gencontrol install -m0755 -d debian/pscan-tfbs/DEBIAN echo misc:Depends= >> debian/pscan-tfbs.substvars echo misc:Pre-Depends= >> debian/pscan-tfbs.substvars install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -cdebian/control -Pdebian/.debhelper/pscan-tfbs/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=pscan-tfbs-dbgsym "-DDepends=pscan-tfbs (= \${binary:Version})" "-DDescription=debug symbols for pscan-tfbs" -DBuild-Ids=44eef59e16cd310852cfcace26ba48fdae6a6370 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -cdebian/control -Pdebian/pscan-tfbs chmod 0644 -- debian/pscan-tfbs/DEBIAN/control dh_md5sums install -m0755 -d debian/pscan-tfbs/DEBIAN cd debian/pscan-tfbs >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/pscan-tfbs/DEBIAN/md5sums install -m0755 -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN cd debian/.debhelper/pscan-tfbs/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/pscan-tfbs .. dpkg-deb --root-owner-group --build debian/.debhelper/pscan-tfbs/dbgsym-root .. dpkg-deb: building package 'pscan-tfbs' in '../pscan-tfbs_1.2.2-4_amd64.deb'. dpkg-deb: building package 'pscan-tfbs-dbgsym' in '../pscan-tfbs-dbgsym_1.2.2-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pscan-tfbs_1.2.2-4_amd64.buildinfo dpkg-genchanges --build=binary -O../pscan-tfbs_1.2.2-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3398173 and its subdirectories I: Current time: Sat Apr 26 11:58:51 +14 2025 I: pbuilder-time-stamp: 1745618331 + false + set +x Fri Apr 25 21:58:51 UTC 2025 I: Signing ./b2/pscan-tfbs_1.2.2-4_amd64.buildinfo as pscan-tfbs_1.2.2-4_amd64.buildinfo.asc Fri Apr 25 21:58:51 UTC 2025 I: Signed ./b2/pscan-tfbs_1.2.2-4_amd64.buildinfo as ./b2/pscan-tfbs_1.2.2-4_amd64.buildinfo.asc Fri Apr 25 21:58:51 UTC 2025 - build #2 for pscan-tfbs/trixie/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Fri Apr 25 21:58:51 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-nes3csuQ, removing. /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH: total 44 drwxr-xr-x 2 jenkins jenkins 4096 Apr 25 21:58 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 25 21:58 b2 -rw-r--r-- 1 jenkins jenkins 1993 Aug 12 2020 pscan-tfbs_1.2.2-4.dsc -rw------- 1 jenkins jenkins 30147 Apr 25 21:58 rbuildlog.YWlITbg /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1: total 828 -rw-r--r-- 1 jenkins jenkins 26749 Apr 25 21:58 build.log -rw-r--r-- 1 jenkins jenkins 695204 Apr 25 21:58 pscan-tfbs-dbgsym_1.2.2-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 7296 Apr 25 21:58 pscan-tfbs_1.2.2-4.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1993 Apr 25 21:58 pscan-tfbs_1.2.2-4.dsc -rw-r--r-- 1 jenkins jenkins 4978 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5860 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1581 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.changes -rw-r--r-- 1 jenkins jenkins 76952 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 1438 Apr 25 21:58 pscan-tfbs_1.2.2-4_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2: total 820 -rw-r--r-- 1 jenkins jenkins 28667 Apr 25 21:58 build.log -rw-r--r-- 1 jenkins jenkins 695204 Apr 25 21:58 pscan-tfbs-dbgsym_1.2.2-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 7296 Apr 25 21:58 pscan-tfbs_1.2.2-4.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1993 Apr 25 21:58 pscan-tfbs_1.2.2-4.dsc -rw-r--r-- 1 jenkins jenkins 4967 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 5849 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1581 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.changes -rw-r--r-- 1 jenkins jenkins 76952 Apr 25 21:58 pscan-tfbs_1.2.2-4_amd64.deb -rw-r--r-- 1 jenkins jenkins 1438 Apr 25 21:58 pscan-tfbs_1.2.2-4_source.changes Fri Apr 25 21:58:52 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Fri Apr 25 21:58:52 UTC 2025 I: pscan-tfbs_1.2.2-4_amd64.changes: Format: 1.8 Date: Wed, 12 Aug 2020 17:17:33 +0530 Source: pscan-tfbs Binary: pscan-tfbs pscan-tfbs-dbgsym Architecture: amd64 Version: 1.2.2-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: pscan-tfbs - search for transcription factor binding sites Changes: pscan-tfbs (1.2.2-4) unstable; urgency=medium . * Team Upload. [ Steffen Moeller ] * d/u/metadata: Fixed yaml syntax * Update metadata . [ Nilesh Patra ] * Add autopkgtests * Install relevant examples * Drop compat, switch to debhelper compat version 13 * Add "Rules-Requires-Root:no" Checksums-Sha1: d3360e34ed3f6e065c622b833a648298f9343179 695204 pscan-tfbs-dbgsym_1.2.2-4_amd64.deb 5965a1fed3d9086f41f83cf5de4581b9b4de5dbd 4978 pscan-tfbs_1.2.2-4_amd64.buildinfo ec3236ac832b7b7037ecc25a81053800dda9d3d9 76952 pscan-tfbs_1.2.2-4_amd64.deb Checksums-Sha256: 897c4acf48008bffac1b1bcfd46b761f3306af7551b7c0d48c3011c56a20f68e 695204 pscan-tfbs-dbgsym_1.2.2-4_amd64.deb f483500f4b0d2395432f6fe55a9e5246f97b3fa13525828013d08e67d07216ac 4978 pscan-tfbs_1.2.2-4_amd64.buildinfo 6088960cec019c715fa601d4f446f6cfa2aaac36cdf31260e6bc21e8f0efd37d 76952 pscan-tfbs_1.2.2-4_amd64.deb Files: 462d077b9f5cbeaeee2f2b314c86e7be 695204 debug optional pscan-tfbs-dbgsym_1.2.2-4_amd64.deb c2ba5f7bf9f096da02e0ccbd699175fc 4978 science optional pscan-tfbs_1.2.2-4_amd64.buildinfo 2db6122b68862b68ceb276f6334e0026 76952 science optional pscan-tfbs_1.2.2-4_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/pscan-tfbs_1.2.2-4.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/pscan-tfbs_1.2.2-4.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/pscan-tfbs_1.2.2-4.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/pscan-tfbs_1.2.2-4.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/amd64/pscan-tfbs_1.2.2-4_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/pscan-tfbs_1.2.2-4.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-04-25 21:58:13.707440020 +0000 +++ b2/build.log 2025-04-25 21:58:52.138620936 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu May 28 16:20:19 -12 2026 -I: pbuilder-time-stamp: 1780028419 +I: Current time: Sat Apr 26 11:58:16 +14 2025 +I: pbuilder-time-stamp: 1745618296 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -22,52 +22,84 @@ dpkg-source: info: unpacking pscan-tfbs_1.2.2-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3627858/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 25 21:58 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='2ba25a1f29c44d7bba5a12b097a38b6e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3627858' - PS1='# ' - PS2='> ' + INVOCATION_ID=e5a30b00f5c74df1bdb33780bf20970e + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3398173 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_VV9E --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1 --logfile b1/build.log pscan-tfbs_1.2.2-4.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pbuilderrc_mxzm --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2 --logfile b2/build.log pscan-tfbs_1.2.2-4.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3627858/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -137,7 +169,7 @@ Get: 30 http://deb.debian.org/debian trixie/main amd64 libgslcblas0 amd64 2.8+dfsg-5 [116 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libgsl28 amd64 2.8+dfsg-5 [994 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libgsl-dev amd64 2.8+dfsg-5 [1222 kB] -Fetched 13.5 MB in 4s (3754 kB/s) +Fetched 13.5 MB in 2s (8903 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19840 files and directories currently installed.) @@ -280,7 +312,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/pscan-tfbs-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pscan-tfbs_1.2.2-4_source.changes +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/pscan-tfbs-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pscan-tfbs_1.2.2-4_source.changes dpkg-buildpackage: info: source package pscan-tfbs dpkg-buildpackage: info: source version 1.2.2-4 dpkg-buildpackage: info: source distribution unstable @@ -423,8 +459,8 @@ dh_builddeb dpkg-deb --root-owner-group --build debian/pscan-tfbs .. dpkg-deb --root-owner-group --build debian/.debhelper/pscan-tfbs/dbgsym-root .. -dpkg-deb: building package 'pscan-tfbs-dbgsym' in '../pscan-tfbs-dbgsym_1.2.2-4_amd64.deb'. dpkg-deb: building package 'pscan-tfbs' in '../pscan-tfbs_1.2.2-4_amd64.deb'. +dpkg-deb: building package 'pscan-tfbs-dbgsym' in '../pscan-tfbs-dbgsym_1.2.2-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pscan-tfbs_1.2.2-4_amd64.buildinfo dpkg-genchanges --build=binary -O../pscan-tfbs_1.2.2-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -432,12 +468,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3398173/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3627858 and its subdirectories -I: Current time: Thu May 28 16:21:12 -12 2026 -I: pbuilder-time-stamp: 1780028472 +I: removing directory /srv/workspace/pbuilder/3398173 and its subdirectories +I: Current time: Sat Apr 26 11:58:51 +14 2025 +I: pbuilder-time-stamp: 1745618331 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/pscan-tfbs_1.2.2-4.diff: 67.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/pscan-tfbs_1.2.2-4.diff.gz b2/build.log: 75.6% -- replaced with stdout Compressing the 1st log... b1/build.log: 76.3% -- replaced with stdout Fri Apr 25 21:58:53 UTC 2025 I: diffoscope 294 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_pscan-tfbs_trixie_amd64_1745618333 + touch /var/log/reproducible-builds/diffoscope_stamp_pscan-tfbs_trixie_amd64_1745618333 + RESULT=0 + systemd-run '--description=diffoscope on pscan-tfbs/1.2.2-4 in trixie/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_22-39835 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH --run-session -c jenkins-reproducible-trixie-diffoscope-9b236309-21f2-4f9b-9867-5aaf1aaab27c -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/dbd-tmp-jaswfpx ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pscan-tfbs_1.2.2-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pscan-tfbs_1.2.2-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pscan-tfbs_1.2.2-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1/pscan-tfbs_1.2.2-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2/pscan-tfbs_1.2.2-4_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_22-39835.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pscan-tfbs_1.2.2-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pscan-tfbs_1.2.2-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/pscan-tfbs_1.2.2-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b1/pscan-tfbs_1.2.2-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.cNRH79UH/b2/pscan-tfbs_1.2.2-4_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.004s) 0.004s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 265ms CPU time consumed: 264ms _ __ _ _ __ ___ ___ __ _ _ __ | |_ / _| |__ ___ | '_ \/ __|/ __/ _` | '_ \ _____| __| |_| '_ \/ __| | |_) \__ \ (_| (_| | | | |_____| |_| _| |_) \__ \ | .__/|___/\___\__,_|_| |_| \__|_| |_.__/|___/ |_| Fri Apr 25 21:58:54 UTC 2025 I: diffoscope 294 found no differences in the changes files, and a .buildinfo file also exists. Fri Apr 25 21:58:54 UTC 2025 I: pscan-tfbs from trixie built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-04-25 21:58:55] INFO: Starting at 2025-04-25 21:58:55.097556 [2025-04-25 21:58:55] INFO: Generating the pages of 1 package(s) [2025-04-25 21:58:55] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/amd64/pscan-tfbs didn't produce a buildlog, even though it has been built. [2025-04-25 21:58:55] INFO: Finished at 2025-04-25 21:58:55.511004, took: 0:00:00.413456 Fri Apr 25 21:58:55 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/amd64/pscan-tfbs.html Fri Apr 25 21:58:55 UTC 2025 I: Submitting .buildinfo files to external archives: Fri Apr 25 21:58:55 UTC 2025 I: Submitting 8.0K b1/pscan-tfbs_1.2.2-4_amd64.buildinfo.asc https://buildinfo.debian.net/5965a1fed3d9086f41f83cf5de4581b9b4de5dbd/pscan-tfbs_1.2.2-4_amd64 Fri Apr 25 21:59:11 UTC 2025 I: Submitting 8.0K b2/pscan-tfbs_1.2.2-4_amd64.buildinfo.asc https://buildinfo.debian.net/cd55df1b69a7dfbe5c217a8d98fff2a750fb731d/pscan-tfbs_1.2.2-4_amd64 Fri Apr 25 21:59:31 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Apr 25 21:59:31 UTC 2025 I: Done submitting .buildinfo files. Fri Apr 25 21:59:31 UTC 2025 I: Removing signed pscan-tfbs_1.2.2-4_amd64.buildinfo.asc files: removed './b1/pscan-tfbs_1.2.2-4_amd64.buildinfo.asc' removed './b2/pscan-tfbs_1.2.2-4_amd64.buildinfo.asc' 1745618371 amd64 trixie pscan-tfbs Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/pscan-tfbs_1.2.2-4.rbuild.log: 73.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/pscan-tfbs_1.2.2-4.rbuild.log.gz [2025-04-25 21:59:32] INFO: Starting at 2025-04-25 21:59:32.016907 [2025-04-25 21:59:32] INFO: Generating the pages of 1 package(s) [2025-04-25 21:59:32] INFO: Finished at 2025-04-25 21:59:32.477396, took: 0:00:00.460515 All cleanup done. Fri Apr 25 21:59:32 UTC 2025 - total duration: 0h 1m 56s. Fri Apr 25 21:59:32 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Dw6S8J0s, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 34.329s CPU time consumed: 7.647s