Running as unit: rb-build-amd64_23-39044.service ==================================================================================== Thu Nov 21 08:27:49 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_23) on jenkins, called using "ionos11-amd64 ionos15-amd64" as arguments. Thu Nov 21 08:27:49 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-DmVgE5R2" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 08:27:49 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Thu Nov 21 08:27:49 UTC 2024 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-lzQ42q' Thu Nov 21 08:27:49 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Thu Nov 21 08:27:49 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-0ig5GS' ok, let's check if inchi is building anywhere yet… ok, inchi is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of inchi in trixie on amd64 on jenkins now. 1st build will be done on ionos11-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Thu Nov 21 08:28:09 UTC 2024 I: starting to build inchi/trixie/amd64 on jenkins on '2024-11-21 08:27' Thu Nov 21 08:28:09 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_23/39044/console.log 1732177689 amd64 trixie inchi Thu Nov 21 08:28:09 UTC 2024 I: Downloading source for trixie/inchi=1.07.1+dfsg-5 --2024-11-21 08:28:09-- http://deb.debian.org/debian/pool/main/i/inchi/inchi_1.07.1%2bdfsg-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2157 (2.1K) [text/prs.lines.tag] Saving to: ‘inchi_1.07.1+dfsg-5.dsc’ 0K .. 100% 305M=0s 2024-11-21 08:28:09 (305 MB/s) - ‘inchi_1.07.1+dfsg-5.dsc’ saved [2157/2157] --2024-11-21 08:28:09-- http://deb.debian.org/debian/pool/main/i/inchi/inchi_1.07.1%2bdfsg-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2157 (2.1K) [text/prs.lines.tag] Saving to: ‘inchi_1.07.1+dfsg-5.dsc’ 0K .. 100% 305M=0s 2024-11-21 08:28:09 (305 MB/s) - ‘inchi_1.07.1+dfsg-5.dsc’ saved [2157/2157] Thu Nov 21 08:28:09 UTC 2024 I: inchi_1.07.1+dfsg-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: inchi Binary: libinchi-dev, libinchi1.07, libinchi-bin Architecture: any Version: 1.07.1+dfsg-5 Maintainer: Debichem Team Uploaders: Daniel Leidert , Andrius Merkys , Homepage: https://www.inchi-trust.org Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/debichem-team/inchi Vcs-Git: https://salsa.debian.org/debichem-team/inchi.git Build-Depends: asciidoc-base, debhelper-compat (= 13), docbook-xml, docbook-xsl, xsltproc Package-List: libinchi-bin deb science optional arch=any libinchi-dev deb libdevel optional arch=any libinchi1.07 deb libs optional arch=any Checksums-Sha1: 69573e69e8ed8744c313a7fd42baffa58aa4681d 95141708 inchi_1.07.1+dfsg.orig.tar.xz 68b23b41db3bf78854ef81cb10f33c36f404760d 6120 inchi_1.07.1+dfsg-5.debian.tar.xz Checksums-Sha256: a626d1ac9fca2ecf1a598a49b9abac615256cbf565fe05434aa94d043e8e3692 95141708 inchi_1.07.1+dfsg.orig.tar.xz 2e1b367aaa36cb7f611bfb0e6de3177a5db9400b4133bbae1e3d81aff6945e5d 6120 inchi_1.07.1+dfsg-5.debian.tar.xz Files: 0e2d25b09ab08d77d16426de22331ce2 95141708 inchi_1.07.1+dfsg.orig.tar.xz 836f565b7fc03ecc612eaab94f35ff57 6120 inchi_1.07.1+dfsg-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmc2BQwSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKH5vwP/RO0D5DNpoi9ETQbvk87vZ0T7I+BjfgE Zy9PMerjOM2Jw5lISw91NsQGEJ4JN9I+zpqWBKTwraW/6rfktpUm3ZCdyQke5rea T36rUUK9scWbuDnMHRmaO/l5AouRT8a17qq0K1qMkl/QIYj4czQXTWF+MwiC1f08 B7svLo5MCQQxuoMjUs1cxRQ5VzABAbCd3NysAFeEp1kJZXTV2AT+caMKUphFnxFd lmjFSlHECmPnpvwx5NhuI7aruWzOol6XG3p6BOGi/0653bs+HRC3ikZg+Yoz8nhV Ms/Rx6VvmEYZhBK+FQoADthmtrgKyhgLoEs0FkW8MPwZj3ZQ1Ry8NQJ3D2uZrJ+Q FeYkOM0wFVHb1i/3rQZDY7cbEbBqqXL4RtX/Nj5xWSUSqZ3ti1D7zjlMOuXnVV2I 45M8U0uY3BtTc9pJ5EOKaQnJ6ShsJ+FrcgXsKNZiZgKlBlie/f4jltXH31kgNUR9 evyTBUVUjX09PsAIzlV1TYS6Zw7fO1OprW54uIS/aOLyTeuBtfK+/ZtWZC3m1fJe oF9bmBDqYoUtOBwAd3VuDgS1idocu0TuYKMnyqmFmujPyX/ljFGpmWIucIiuDT4S otofVwkGPQMwVA3DjWnv0YI4sJ7MtGEv+udKc0E10MH2cylJSsCG43zEFQnSedZk ha/EP4BwC0V/ =qdnI -----END PGP SIGNATURE----- Thu Nov 21 08:28:09 UTC 2024 I: Checking whether the package is not for us Thu Nov 21 08:28:09 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Thu Nov 21 08:28:09 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Thu Nov 21 08:28:09 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Thu Nov 21 08:28:09 UTC 2024 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-8smXHA' ==================================================================================== Thu Nov 21 08:28:10 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "1 inchi trixie /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h 1.07.1+dfsg-5" as arguments. Thu Nov 21 08:28:10 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-vMlY3YLd" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 08:28:10 UTC 2024 I: Downloading source for trixie/inchi=1.07.1+dfsg-5 Reading package lists... NOTICE: 'inchi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/inchi.git Please use: git clone https://salsa.debian.org/debichem-team/inchi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 95.1 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (dsc) [2157 B] Get:2 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (tar) [95.1 MB] Get:3 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (diff) [6120 B] Fetched 95.1 MB in 2s (43.1 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'inchi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/inchi.git Please use: git clone https://salsa.debian.org/debichem-team/inchi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 95.1 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (dsc) [2157 B] Get:2 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (tar) [95.1 MB] Get:3 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (diff) [6120 B] Fetched 95.1 MB in 2s (43.1 MB/s) Download complete and in download only mode ============================================================================= Building inchi in trixie on amd64 on ionos11-amd64 now. Date: Thu Nov 21 08:28:12 UTC 2024 Date UTC: Thu Nov 21 08:28:12 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 20 20:28:13 -12 2024 I: pbuilder-time-stamp: 1732177693 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [inchi_1.07.1+dfsg-5.dsc] I: copying [./inchi_1.07.1+dfsg.orig.tar.xz] I: copying [./inchi_1.07.1+dfsg-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Nov 14 14:11:24 2024 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./inchi_1.07.1+dfsg-5.dsc: no acceptable signature found dpkg-source: info: extracting inchi in inchi-1.07.1+dfsg dpkg-source: info: unpacking inchi_1.07.1+dfsg.orig.tar.xz dpkg-source: info: unpacking inchi_1.07.1+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian_build.patch dpkg-source: info: applying cross.patch dpkg-source: info: applying no-RUNPATH.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/973204/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='bc28bcc842f74c46be8e2a40dc38b11b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='973204' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_VGd5 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1 --logfile b1/build.log inchi_1.07.1+dfsg-5.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/973204/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: asciidoc-base, debhelper-compat (= 13), docbook-xml, docbook-xsl, xsltproc dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on asciidoc-base; however: Package asciidoc-base is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on docbook-xml; however: Package docbook-xml is not installed. pbuilder-satisfydepends-dummy depends on docbook-xsl; however: Package docbook-xsl is not installed. pbuilder-satisfydepends-dummy depends on xsltproc; however: Package xsltproc is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: asciidoc-base{a} asciidoc-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} docbook-xml{a} docbook-xsl{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} libxml2-utils{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sgml-data{a} tzdata{a} xml-core{a} xsltproc{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget xmlto 0 packages upgraded, 61 newly installed, 0 to remove and 0 not upgraded. Need to get 29.0 MB of archives. After unpacking 125 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 asciidoc-common all 10.2.1-1 [104 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 xml-core all 0.19 [20.1 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 docbook-xsl all 1.79.2+dfsg-7 [1221 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libxml2-utils amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [99.4 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 xsltproc amd64 1.1.35-1.1+b1 [115 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 asciidoc-base all 10.2.1-1 [84.9 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 54 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 docbook-xml all 4.5-13 [77.4 kB] Fetched 29.0 MB in 1s (31.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21351 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_amd64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sgml-base. 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Current default time zone: 'Etc/UTC' Local time is now: Thu Nov 21 08:29:10 UTC 2024. Universal Time is now: Thu Nov 21 08:29:10 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libxml2-utils (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up xsltproc (1.1.35-1.1+b1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up asciidoc-common (10.2.1-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xsl (1.79.2+dfsg-7) ... Setting up sgml-data (2.0.11+nmu1) ... Setting up asciidoc-base (10.2.1-1) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xml (4.5-13) ... Processing triggers for sgml-base (1.31) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/inchi-1.07.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../inchi_1.07.1+dfsg-5_source.changes dpkg-buildpackage: info: source package inchi dpkg-buildpackage: info: source version 1.07.1+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem makefile debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' find /build/reproducible-path/inchi-1.07.1+dfsg -name "*.o" -delete rm -f INCHI-1-SRC/INCHI_API/libinchi/gcc/*.so. \ INCHI-1-SRC/INCHI_API/libinchi/gcc/inchi_main rm -f -rf INCHI-1-SRC/INCHI_API/bin rm -f -rf INCHI-1-SRC/INCHI_EXE/bin make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_autoreconf_clean -O--buildsystem=makefile dh_clean -O--buildsystem=makefile debian/rules binary dh binary --buildsystem makefile dh_update_autotools_config -O--buildsystem=makefile dh_autoreconf -O--buildsystem=makefile dh_auto_configure -O--buildsystem=makefile debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' mkdir --parents INCHI-1-SRC/INCHI_API/bin/Linux mkdir --parents INCHI-1-SRC/INCHI_EXE/bin/Linux # Building inchi_main builds shared library too dh_auto_build -- -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM="-Wl,-z,relro" make -j20 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' make[2]: clang: No such file or directory Both GCC and Clang/LLVM detected. Compiling with GCC (default) -- please edit makefile to compile with Clang/LLVM. cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_0dstereo.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichimain.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichi_io.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichi_parms.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_inchi_atom.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_mol2atom.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readinch.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readmol.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readstru.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_util.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichimain_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichican2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichicano.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_io.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichierr.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichicans.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiisot.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ichilnct.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimak2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimake.c ../src/e_ichi_parms.c: In function 'e_HelpCommandLineParms': ../src/e_ichi_parms.c:2654:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2654:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap1.c ../src/e_ichi_parms.c: In function 'e_OpenFiles': ../src/e_ichi_parms.c:2853:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2853:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2862:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2862 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2862:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2862 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2871:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2871:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichinorm.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiparm.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiqueu.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiring.c ../../../../INCHI_BASE/src/ichiparm.c: In function 'HelpCommandLineParms': ../../../../INCHI_BASE/src/ichiparm.c:2718:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../../../../INCHI_BASE/src/ichiparm.c:2718:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichisort.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichister.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichitaut.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_bns.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiread.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr5.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr6.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr7.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_base26.c In file included from ../../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../../INCHI_BASE/src/ichiprt1.c:1747:31: ../../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 1165 | #define inchi_calloc calloc ../../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); | ^~~~~~~~~~~~ In file included from ../../../../INCHI_BASE/src/ichiprt1.c:41: /usr/include/stdlib.h: In function 'OutputINChI1': /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_main.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_b.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_inchikey_builder.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_read_mol.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_status.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_builder.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_mol.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_read_inchi.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol2atom.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/readinch.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/sha2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/strutil.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/util.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/bcf_s.c cc -shared -Wl,-z,relro -o ../../../bin/Linux/libinchi.so.1.07 \ ichican2.o ichicano.o ichi_io.o ichierr.o ichicans.o ichiisot.o ichilnct.o ichimak2.o ichimake.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiparm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichi_bns.o inchi_dll.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_dll.o ikey_base26.o inchi_dll_main.o inchi_dll_a.o inchi_dll_a2.o inchi_dll_b.o ixa_inchikey_builder.o ixa_read_mol.o ixa_status.o ixa_builder.o ixa_mol.o ixa_read_inchi.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol2atom.o mol_fmt4.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o bcf_s.o -Wl,--version-script=libinchi.map,-z,relro,-soname,libinchi.so.1.07 -lm cc -s -Wl,-R,"" -Wl,-z,relro -o ../../../bin/Linux/inchi_main e_0dstereo.o e_ichimain.o e_ichi_io.o e_ichi_parms.o e_inchi_atom.o e_mol2atom.o e_readinch.o e_readmol.o e_readstru.o e_util.o e_ichimain_a.o \ ../../../bin/Linux/libinchi.so.1.07 -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' dh_auto_build -- -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM="-Wl,-z,relro" make -j20 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[2]: clang: No such file or directory Both GCC/G++ and Clang(++)/LLVM detected. Compiling with GCC/G++ (default) -- please edit makefile to compile with Clang(++)/LLVM. gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichi_bns.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichi_io.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichicano.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichican2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichicans.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichierr.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiisot.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimake.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimak2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichinorm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiqueu.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiring.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichisort.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichister.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichitaut.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiparm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiread.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr1.c In function 'MakeDecNumber', inlined from 'MakeHString' at ../../../INCHI_BASE/src/ichiprt2.c:1008:36: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeHString': ../../../INCHI_BASE/src/ichiprt2.c:802:10: note: at offset -1 into destination object 'szValue' of size 2048 802 | char szValue[2048]; | ^~~~~~~ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr2.c ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ | ~~~~~~~~~~~~~~~^~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In function 'MakeDecNumber', inlined from 'MakeCRVString' at ../../../INCHI_BASE/src/ichiprt2.c:1413:32: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ | ~~~~~~~~~~~~~~~^~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In function 'MakeDecNumber', inlined from 'MakeCRVString' at ../../../INCHI_BASE/src/ichiprt2.c:1413:32: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr5.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr6.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr7.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_base26.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_dll.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt3.c In file included from ../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../INCHI_BASE/src/ichiprt1.c:1747:31: ../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 1165 | #define inchi_calloc calloc ../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); | ^~~~~~~~~~~~ In file included from ../../../INCHI_BASE/src/ichiprt1.c:41: /usr/include/stdlib.h: In function 'OutputINChI1': /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol2atom.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/readinch.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/sha2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/strutil.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/util.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/dispstru.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/ichimain.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/bcf_s.c g++ -s -o ../../bin/Linux/inchi-1 ichi_bns.o ichi_io.o ichicano.o ichican2.o ichicans.o ichierr.o ichiisot.o ichimake.o ichimak2.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichiparm.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_base26.o ikey_dll.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol_fmt4.o mol2atom.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o dispstru.o ichimain.o bcf_s.o -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_auto_test -O--buildsystem=makefile create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=makefile dh_prep -O--buildsystem=makefile dh_auto_install -O--buildsystem=makefile dh_install -O--buildsystem=makefile debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' find INCHI-1-SRC/INCHI_API/bin/Linux -name 'libinchi.so.*' \ | grep -v '.gz$' \ | xargs -i dh_install -plibinchi1.07 {} usr/lib/x86_64-linux-gnu mkdir --parents /build/reproducible-path/inchi-1.07.1+dfsg/debian/libinchi-dev/usr/lib/x86_64-linux-gnu ln -s libinchi.so.1.07 \ /build/reproducible-path/inchi-1.07.1+dfsg/debian/libinchi-dev/usr/lib/x86_64-linux-gnu/libinchi.so make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_installdocs -O--buildsystem=makefile dh_installchangelogs -O--buildsystem=makefile debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' a2x -f manpage debian/inchi_main.1.txt a2x -f manpage debian/inchi-1.1.txt dh_installman make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_installsystemduser -O--buildsystem=makefile dh_perl -O--buildsystem=makefile dh_link -O--buildsystem=makefile dh_strip_nondeterminism -O--buildsystem=makefile dh_compress -O--buildsystem=makefile dh_fixperms -O--buildsystem=makefile dh_missing -O--buildsystem=makefile dh_dwz -a -O--buildsystem=makefile dwz: debian/libinchi-bin/usr/bin/inchi-1: .debug_info section not present dwz: debian/libinchi-bin/usr/bin/inchi_main: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -a -O--buildsystem=makefile dh_makeshlibs -a -O--buildsystem=makefile dh_shlibdeps -a -O--buildsystem=makefile dh_installdeb -O--buildsystem=makefile dh_gencontrol -O--buildsystem=makefile dh_md5sums -O--buildsystem=makefile dh_builddeb -O--buildsystem=makefile dpkg-deb: building package 'libinchi-dev' in '../libinchi-dev_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07' in '../libinchi1.07_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07-dbgsym' in '../libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi-bin' in '../libinchi-bin_1.07.1+dfsg-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../inchi_1.07.1+dfsg-5_amd64.buildinfo dpkg-genchanges --build=binary -O../inchi_1.07.1+dfsg-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/973204 and its subdirectories I: Current time: Wed Nov 20 20:29:52 -12 2024 I: pbuilder-time-stamp: 1732177792 Thu Nov 21 08:29:52 UTC 2024 I: Signing ./b1/inchi_1.07.1+dfsg-5_amd64.buildinfo as inchi_1.07.1+dfsg-5_amd64.buildinfo.asc Thu Nov 21 08:29:52 UTC 2024 I: Signed ./b1/inchi_1.07.1+dfsg-5_amd64.buildinfo as ./b1/inchi_1.07.1+dfsg-5_amd64.buildinfo.asc Thu Nov 21 08:29:52 UTC 2024 - build #1 for inchi/trixie/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Thu Nov 21 08:29:52 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-vMlY3YLd, removing. /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 08:29 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 08:28 b2 -rw-r--r-- 1 jenkins jenkins 2157 Nov 14 14:23 inchi_1.07.1+dfsg-5.dsc -rw------- 1 jenkins jenkins 3273 Nov 21 08:28 rbuildlog.J7Em0ph /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1: total 2628 -rw-r--r-- 1 jenkins jenkins 64257 Nov 21 08:29 build.log -rw-r--r-- 1 jenkins jenkins 6120 Nov 21 08:29 inchi_1.07.1+dfsg-5.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2157 Nov 21 08:29 inchi_1.07.1+dfsg-5.dsc -rw-r--r-- 1 jenkins jenkins 6661 Nov 21 08:29 inchi_1.07.1+dfsg-5_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7543 Nov 21 08:29 inchi_1.07.1+dfsg-5_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2234 Nov 21 08:29 inchi_1.07.1+dfsg-5_amd64.changes -rw-r--r-- 1 jenkins jenkins 1256 Nov 21 08:29 inchi_1.07.1+dfsg-5_source.changes -rw-r--r-- 1 jenkins jenkins 565116 Nov 21 08:29 libinchi-bin_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 19456 Nov 21 08:29 libinchi-dev_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 1443436 Nov 21 08:29 libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 556500 Nov 21 08:29 libinchi1.07_1.07.1+dfsg-5_amd64.deb /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2: total 0 Thu Nov 21 08:29:53 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 20 20:28:13 -12 2024 I: pbuilder-time-stamp: 1732177693 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [inchi_1.07.1+dfsg-5.dsc] I: copying [./inchi_1.07.1+dfsg.orig.tar.xz] I: copying [./inchi_1.07.1+dfsg-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Nov 14 14:11:24 2024 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./inchi_1.07.1+dfsg-5.dsc: no acceptable signature found dpkg-source: info: extracting inchi in inchi-1.07.1+dfsg dpkg-source: info: unpacking inchi_1.07.1+dfsg.orig.tar.xz dpkg-source: info: unpacking inchi_1.07.1+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian_build.patch dpkg-source: info: applying cross.patch dpkg-source: info: applying no-RUNPATH.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/973204/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='bc28bcc842f74c46be8e2a40dc38b11b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='973204' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_VGd5 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1 --logfile b1/build.log inchi_1.07.1+dfsg-5.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/973204/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: asciidoc-base, debhelper-compat (= 13), docbook-xml, docbook-xsl, xsltproc dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on asciidoc-base; however: Package asciidoc-base is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on docbook-xml; however: Package docbook-xml is not installed. pbuilder-satisfydepends-dummy depends on docbook-xsl; however: Package docbook-xsl is not installed. pbuilder-satisfydepends-dummy depends on xsltproc; however: Package xsltproc is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: asciidoc-base{a} asciidoc-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} docbook-xml{a} docbook-xsl{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} libxml2-utils{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sgml-data{a} tzdata{a} xml-core{a} xsltproc{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget xmlto 0 packages upgraded, 61 newly installed, 0 to remove and 0 not upgraded. Need to get 29.0 MB of archives. After unpacking 125 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 asciidoc-common all 10.2.1-1 [104 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 xml-core all 0.19 [20.1 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 docbook-xsl all 1.79.2+dfsg-7 [1221 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libxml2-utils amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [99.4 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 xsltproc amd64 1.1.35-1.1+b1 [115 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 asciidoc-base all 10.2.1-1 [84.9 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 54 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 docbook-xml all 4.5-13 [77.4 kB] Fetched 29.0 MB in 1s (31.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20289 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21351 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_amd64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../01-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_amd64.deb ... 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Current default time zone: 'Etc/UTC' Local time is now: Thu Nov 21 08:29:10 UTC 2024. Universal Time is now: Thu Nov 21 08:29:10 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/inchi-1.07.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../inchi_1.07.1+dfsg-5_source.changes dpkg-buildpackage: info: source package inchi dpkg-buildpackage: info: source version 1.07.1+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem makefile debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' find /build/reproducible-path/inchi-1.07.1+dfsg -name "*.o" -delete rm -f INCHI-1-SRC/INCHI_API/libinchi/gcc/*.so. \ INCHI-1-SRC/INCHI_API/libinchi/gcc/inchi_main rm -f -rf INCHI-1-SRC/INCHI_API/bin rm -f -rf INCHI-1-SRC/INCHI_EXE/bin make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_autoreconf_clean -O--buildsystem=makefile dh_clean -O--buildsystem=makefile debian/rules binary dh binary --buildsystem makefile dh_update_autotools_config -O--buildsystem=makefile dh_autoreconf -O--buildsystem=makefile dh_auto_configure -O--buildsystem=makefile debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' mkdir --parents INCHI-1-SRC/INCHI_API/bin/Linux mkdir --parents INCHI-1-SRC/INCHI_EXE/bin/Linux # Building inchi_main builds shared library too dh_auto_build -- -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM="-Wl,-z,relro" make -j20 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' make[2]: clang: No such file or directory Both GCC and Clang/LLVM detected. Compiling with GCC (default) -- please edit makefile to compile with Clang/LLVM. cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_0dstereo.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichimain.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichi_io.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichi_parms.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_inchi_atom.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_mol2atom.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readinch.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readmol.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readstru.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_util.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichimain_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichican2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichicano.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_io.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichierr.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichicans.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiisot.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ichilnct.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimak2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimake.c ../src/e_ichi_parms.c: In function 'e_HelpCommandLineParms': ../src/e_ichi_parms.c:2654:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2654:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap1.c ../src/e_ichi_parms.c: In function 'e_OpenFiles': ../src/e_ichi_parms.c:2853:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2853:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2862:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2862 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2862:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2862 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2871:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2871:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichinorm.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiparm.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiqueu.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiring.c ../../../../INCHI_BASE/src/ichiparm.c: In function 'HelpCommandLineParms': ../../../../INCHI_BASE/src/ichiparm.c:2718:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../../../../INCHI_BASE/src/ichiparm.c:2718:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichisort.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichister.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichitaut.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_bns.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiread.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr5.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr6.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr7.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_base26.c In file included from ../../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../../INCHI_BASE/src/ichiprt1.c:1747:31: ../../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 1165 | #define inchi_calloc calloc ../../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); | ^~~~~~~~~~~~ In file included from ../../../../INCHI_BASE/src/ichiprt1.c:41: /usr/include/stdlib.h: In function 'OutputINChI1': /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_main.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_b.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_inchikey_builder.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_read_mol.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_status.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_builder.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_mol.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_read_inchi.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol2atom.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/readinch.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/sha2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/strutil.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/util.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/bcf_s.c cc -shared -Wl,-z,relro -o ../../../bin/Linux/libinchi.so.1.07 \ ichican2.o ichicano.o ichi_io.o ichierr.o ichicans.o ichiisot.o ichilnct.o ichimak2.o ichimake.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiparm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichi_bns.o inchi_dll.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_dll.o ikey_base26.o inchi_dll_main.o inchi_dll_a.o inchi_dll_a2.o inchi_dll_b.o ixa_inchikey_builder.o ixa_read_mol.o ixa_status.o ixa_builder.o ixa_mol.o ixa_read_inchi.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol2atom.o mol_fmt4.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o bcf_s.o -Wl,--version-script=libinchi.map,-z,relro,-soname,libinchi.so.1.07 -lm cc -s -Wl,-R,"" -Wl,-z,relro -o ../../../bin/Linux/inchi_main e_0dstereo.o e_ichimain.o e_ichi_io.o e_ichi_parms.o e_inchi_atom.o e_mol2atom.o e_readinch.o e_readmol.o e_readstru.o e_util.o e_ichimain_a.o \ ../../../bin/Linux/libinchi.so.1.07 -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' dh_auto_build -- -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM="-Wl,-z,relro" make -j20 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[2]: clang: No such file or directory Both GCC/G++ and Clang(++)/LLVM detected. Compiling with GCC/G++ (default) -- please edit makefile to compile with Clang(++)/LLVM. gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichi_bns.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichi_io.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichicano.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichican2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichicans.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichierr.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiisot.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimake.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimak2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichinorm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiqueu.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiring.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichisort.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichister.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichitaut.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiparm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiread.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr1.c In function 'MakeDecNumber', inlined from 'MakeHString' at ../../../INCHI_BASE/src/ichiprt2.c:1008:36: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeHString': ../../../INCHI_BASE/src/ichiprt2.c:802:10: note: at offset -1 into destination object 'szValue' of size 2048 802 | char szValue[2048]; | ^~~~~~~ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr2.c ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ | ~~~~~~~~~~~~~~~^~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In function 'MakeDecNumber', inlined from 'MakeCRVString' at ../../../INCHI_BASE/src/ichiprt2.c:1413:32: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ | ~~~~~~~~~~~~~~~^~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In function 'MakeDecNumber', inlined from 'MakeCRVString' at ../../../INCHI_BASE/src/ichiprt2.c:1413:32: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr5.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr6.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr7.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_base26.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_dll.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt3.c In file included from ../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../INCHI_BASE/src/ichiprt1.c:1747:31: ../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 1165 | #define inchi_calloc calloc ../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); | ^~~~~~~~~~~~ In file included from ../../../INCHI_BASE/src/ichiprt1.c:41: /usr/include/stdlib.h: In function 'OutputINChI1': /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol2atom.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/readinch.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/sha2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/strutil.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/util.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/dispstru.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/ichimain.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/bcf_s.c g++ -s -o ../../bin/Linux/inchi-1 ichi_bns.o ichi_io.o ichicano.o ichican2.o ichicans.o ichierr.o ichiisot.o ichimake.o ichimak2.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichiparm.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_base26.o ikey_dll.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol_fmt4.o mol2atom.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o dispstru.o ichimain.o bcf_s.o -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_auto_test -O--buildsystem=makefile create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=makefile dh_prep -O--buildsystem=makefile dh_auto_install -O--buildsystem=makefile dh_install -O--buildsystem=makefile debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' find INCHI-1-SRC/INCHI_API/bin/Linux -name 'libinchi.so.*' \ | grep -v '.gz$' \ | xargs -i dh_install -plibinchi1.07 {} usr/lib/x86_64-linux-gnu mkdir --parents /build/reproducible-path/inchi-1.07.1+dfsg/debian/libinchi-dev/usr/lib/x86_64-linux-gnu ln -s libinchi.so.1.07 \ /build/reproducible-path/inchi-1.07.1+dfsg/debian/libinchi-dev/usr/lib/x86_64-linux-gnu/libinchi.so make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_installdocs -O--buildsystem=makefile dh_installchangelogs -O--buildsystem=makefile debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' a2x -f manpage debian/inchi_main.1.txt a2x -f manpage debian/inchi-1.1.txt dh_installman make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_installsystemduser -O--buildsystem=makefile dh_perl -O--buildsystem=makefile dh_link -O--buildsystem=makefile dh_strip_nondeterminism -O--buildsystem=makefile dh_compress -O--buildsystem=makefile dh_fixperms -O--buildsystem=makefile dh_missing -O--buildsystem=makefile dh_dwz -a -O--buildsystem=makefile dwz: debian/libinchi-bin/usr/bin/inchi-1: .debug_info section not present dwz: debian/libinchi-bin/usr/bin/inchi_main: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -a -O--buildsystem=makefile dh_makeshlibs -a -O--buildsystem=makefile dh_shlibdeps -a -O--buildsystem=makefile dh_installdeb -O--buildsystem=makefile dh_gencontrol -O--buildsystem=makefile dh_md5sums -O--buildsystem=makefile dh_builddeb -O--buildsystem=makefile dpkg-deb: building package 'libinchi-dev' in '../libinchi-dev_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07' in '../libinchi1.07_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07-dbgsym' in '../libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi-bin' in '../libinchi-bin_1.07.1+dfsg-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../inchi_1.07.1+dfsg-5_amd64.buildinfo dpkg-genchanges --build=binary -O../inchi_1.07.1+dfsg-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/973204 and its subdirectories I: Current time: Wed Nov 20 20:29:52 -12 2024 I: pbuilder-time-stamp: 1732177792 Thu Nov 21 08:29:53 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Thu Nov 21 08:29:53 UTC 2024 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Thu Nov 21 08:29:53 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Thu Nov 21 08:29:53 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-CIVFzY' ==================================================================================== Wed Dec 24 14:52:54 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 inchi trixie /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h 1.07.1+dfsg-5" as arguments. Wed Dec 24 14:52:54 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-C1rmCMUZ" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Dec 24 14:52:54 UTC 2025 I: Downloading source for trixie/inchi=1.07.1+dfsg-5 Reading package lists... NOTICE: 'inchi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/inchi.git Please use: git clone https://salsa.debian.org/debichem-team/inchi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 95.1 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (dsc) [2157 B] Get:2 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (tar) [95.1 MB] Get:3 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (diff) [6120 B] Fetched 95.1 MB in 2s (46.0 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'inchi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/inchi.git Please use: git clone https://salsa.debian.org/debichem-team/inchi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 95.1 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (dsc) [2157 B] Get:2 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (tar) [95.1 MB] Get:3 http://deb.debian.org/debian trixie/main inchi 1.07.1+dfsg-5 (diff) [6120 B] Fetched 95.1 MB in 2s (46.0 MB/s) Download complete and in download only mode ============================================================================= Re-Building inchi in trixie on amd64 on ionos15-amd64 now. Date: Wed Dec 24 14:52:56 UTC 2025 Date UTC: Wed Dec 24 14:52:56 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_Dzbm + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' inchi = debian-installer -o inchi = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' inchi = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_Dzbm --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2 --logfile b2/build.log inchi_1.07.1+dfsg-5.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 04:52:56 +14 2025 I: pbuilder-time-stamp: 1766587976 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [inchi_1.07.1+dfsg-5.dsc] I: copying [./inchi_1.07.1+dfsg.orig.tar.xz] I: copying [./inchi_1.07.1+dfsg-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Nov 14 14:11:24 2024 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./inchi_1.07.1+dfsg-5.dsc: no acceptable signature found dpkg-source: info: extracting inchi in inchi-1.07.1+dfsg dpkg-source: info: unpacking inchi_1.07.1+dfsg.orig.tar.xz dpkg-source: info: unpacking inchi_1.07.1+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian_build.patch dpkg-source: info: applying cross.patch dpkg-source: info: applying no-RUNPATH.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 24 14:53 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=7c6cc910cde0455f94d3c8a087788a53 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2908337 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_Dzbm --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2 --logfile b2/build.log inchi_1.07.1+dfsg-5.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: asciidoc-base, debhelper-compat (= 13), docbook-xml, docbook-xsl, xsltproc dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on asciidoc-base; however: Package asciidoc-base is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on docbook-xml; however: Package docbook-xml is not installed. pbuilder-satisfydepends-dummy depends on docbook-xsl; however: Package docbook-xsl is not installed. pbuilder-satisfydepends-dummy depends on xsltproc; however: Package xsltproc is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: asciidoc-base{a} asciidoc-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} docbook-xml{a} docbook-xsl{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} libxml2-utils{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sgml-data{a} tzdata{a} xml-core{a} xsltproc{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget xmlto 0 packages upgraded, 61 newly installed, 0 to remove and 0 not upgraded. Need to get 29.0 MB of archives. After unpacking 125 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 asciidoc-common all 10.2.1-1 [104 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 xml-core all 0.19 [20.1 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 docbook-xsl all 1.79.2+dfsg-7 [1221 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libxml2-utils amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [99.4 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 xsltproc amd64 1.1.35-1.1+b1 [115 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 asciidoc-base all 10.2.1-1 [84.9 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 54 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 docbook-xml all 4.5-13 [77.4 kB] Fetched 29.0 MB in 11s (2694 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20289 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21351 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_amd64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../01-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_amd64.deb ... 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Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../32-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../33-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../34-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../35-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../36-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../37-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package sgml-data. Preparing to unpack .../38-sgml-data_2.0.11+nmu1_all.deb ... Unpacking sgml-data (2.0.11+nmu1) ... Selecting previously unselected package docbook-xml. Preparing to unpack .../39-docbook-xml_4.5-13_all.deb ... Unpacking docbook-xml (4.5-13) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Dec 24 14:54:21 UTC 2025. Universal Time is now: Wed Dec 24 14:54:21 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libxml2-utils (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up xsltproc (1.1.35-1.1+b1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up asciidoc-common (10.2.1-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xsl (1.79.2+dfsg-7) ... Setting up sgml-data (2.0.11+nmu1) ... Setting up asciidoc-base (10.2.1-1) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xml (4.5-13) ... Processing triggers for sgml-base (1.31) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/inchi-1.07.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../inchi_1.07.1+dfsg-5_source.changes dpkg-buildpackage: info: source package inchi dpkg-buildpackage: info: source version 1.07.1+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem makefile debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' find /build/reproducible-path/inchi-1.07.1+dfsg -name "*.o" -delete rm -f INCHI-1-SRC/INCHI_API/libinchi/gcc/*.so. \ INCHI-1-SRC/INCHI_API/libinchi/gcc/inchi_main rm -f -rf INCHI-1-SRC/INCHI_API/bin rm -f -rf INCHI-1-SRC/INCHI_EXE/bin make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_autoreconf_clean -O--buildsystem=makefile dh_clean -O--buildsystem=makefile debian/rules binary dh binary --buildsystem makefile dh_update_autotools_config -O--buildsystem=makefile dh_autoreconf -O--buildsystem=makefile dh_auto_configure -O--buildsystem=makefile debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' mkdir --parents INCHI-1-SRC/INCHI_API/bin/Linux mkdir --parents INCHI-1-SRC/INCHI_EXE/bin/Linux # Building inchi_main builds shared library too dh_auto_build -- -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM="-Wl,-z,relro" make -j42 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' make[2]: clang: No such file or directory Both GCC and Clang/LLVM detected. Compiling with GCC (default) -- please edit makefile to compile with Clang/LLVM. cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_0dstereo.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichimain.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichi_io.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichi_parms.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_inchi_atom.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_mol2atom.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readinch.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readmol.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_readstru.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_util.c cc -DBUILD_LINK_AS_DLL -DTARGET_EXE_USING_API -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../src/e_ichimain_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichican2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichicano.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_io.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichierr.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichicans.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiisot.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ichilnct.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimak2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimake.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichinorm.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiparm.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiqueu.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiring.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichisort.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichister.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichitaut.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_bns.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiread.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr5.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr6.c ../src/e_ichi_parms.c: In function 'e_HelpCommandLineParms': ../src/e_ichi_parms.c:2654:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2654:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c: In function 'e_OpenFiles': ../src/e_ichi_parms.c:2853:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2853:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2862:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2862 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2862:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2862 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2871:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../src/e_ichi_parms.c:2871:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../../../../INCHI_BASE/src/ichiparm.c: In function 'HelpCommandLineParms': ../../../../INCHI_BASE/src/ichiparm.c:2718:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ ../../../../INCHI_BASE/src/ichiparm.c:2718:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr7.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_base26.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_main.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_b.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_inchikey_builder.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_read_mol.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_status.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_builder.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_mol.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ixa/ixa_read_inchi.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt1.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol2atom.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/mol_fmt4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/readinch.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi3.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/runichi4.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/sha2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/strutil.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/util.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/bcf_s.c In file included from ../../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../../INCHI_BASE/src/ichiprt1.c:1747:31: ../../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 1165 | #define inchi_calloc calloc ../../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); | ^~~~~~~~~~~~ In file included from ../../../../INCHI_BASE/src/ichiprt1.c:41: /usr/include/stdlib.h: In function 'OutputINChI1': /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ cc -shared -Wl,-z,relro -o ../../../bin/Linux/libinchi.so.1.07 \ ichican2.o ichicano.o ichi_io.o ichierr.o ichicans.o ichiisot.o ichilnct.o ichimak2.o ichimake.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiparm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichi_bns.o inchi_dll.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_dll.o ikey_base26.o inchi_dll_main.o inchi_dll_a.o inchi_dll_a2.o inchi_dll_b.o ixa_inchikey_builder.o ixa_read_mol.o ixa_status.o ixa_builder.o ixa_mol.o ixa_read_inchi.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol2atom.o mol_fmt4.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o bcf_s.o -Wl,--version-script=libinchi.map,-z,relro,-soname,libinchi.so.1.07 -lm cc -s -Wl,-R,"" -Wl,-z,relro -o ../../../bin/Linux/inchi_main e_0dstereo.o e_ichimain.o e_ichi_io.o e_ichi_parms.o e_inchi_atom.o e_mol2atom.o e_readinch.o e_readmol.o e_readstru.o e_util.o e_ichimain_a.o \ ../../../bin/Linux/libinchi.so.1.07 -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' dh_auto_build -- -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM="-Wl,-z,relro" make -j42 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[2]: clang: No such file or directory Both GCC/G++ and Clang(++)/LLVM detected. Compiling with GCC/G++ (default) -- please edit makefile to compile with Clang(++)/LLVM. gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichi_bns.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichi_io.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichicano.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichican2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichicans.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichierr.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiisot.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimake.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimak2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichimap4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichinorm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiprt3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiqueu.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiring.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichisort.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichister.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichitaut.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiparm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiread.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr5.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr6.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr7.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_base26.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_dll.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt1.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol2atom.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/readinch.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi3.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi4.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/sha2.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/strutil.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/util.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/dispstru.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/ichimain.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/bcf_s.c In function 'MakeDecNumber', inlined from 'MakeHString' at ../../../INCHI_BASE/src/ichiprt2.c:1008:36: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeHString': ../../../INCHI_BASE/src/ichiprt2.c:802:10: note: at offset -1 into destination object 'szValue' of size 2048 802 | char szValue[2048]; | ^~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ | ~~~~~~~~~~~~~~~^~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In function 'MakeDecNumber', inlined from 'MakeCRVString' at ../../../INCHI_BASE/src/ichiprt2.c:1413:32: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ | ~~~~~~~~~~~~~~~^~~~~ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In function 'MakeDecNumber', inlined from 'MakeCRVString' at ../../../INCHI_BASE/src/ichiprt2.c:1413:32: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2246 | *p++ = *szLeadingDelim++; /* djb-rwth: GCC 14 false positive */ | ~~~~~^~~~~~~~~~~~~~~~~~~ ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ In file included from ../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../INCHI_BASE/src/ichiprt1.c:1747:31: ../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 1165 | #define inchi_calloc calloc ../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); | ^~~~~~~~~~~~ In file included from ../../../INCHI_BASE/src/ichiprt1.c:41: /usr/include/stdlib.h: In function 'OutputINChI1': /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ g++ -s -o ../../bin/Linux/inchi-1 ichi_bns.o ichi_io.o ichicano.o ichican2.o ichicans.o ichierr.o ichiisot.o ichimake.o ichimak2.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichiparm.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_base26.o ikey_dll.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol_fmt4.o mol2atom.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o dispstru.o ichimain.o bcf_s.o -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_auto_test -O--buildsystem=makefile create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=makefile dh_prep -O--buildsystem=makefile dh_auto_install -O--buildsystem=makefile dh_install -O--buildsystem=makefile debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' find INCHI-1-SRC/INCHI_API/bin/Linux -name 'libinchi.so.*' \ | grep -v '.gz$' \ | xargs -i dh_install -plibinchi1.07 {} usr/lib/x86_64-linux-gnu mkdir --parents /build/reproducible-path/inchi-1.07.1+dfsg/debian/libinchi-dev/usr/lib/x86_64-linux-gnu ln -s libinchi.so.1.07 \ /build/reproducible-path/inchi-1.07.1+dfsg/debian/libinchi-dev/usr/lib/x86_64-linux-gnu/libinchi.so make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_installdocs -O--buildsystem=makefile dh_installchangelogs -O--buildsystem=makefile debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg' a2x -f manpage debian/inchi_main.1.txt a2x -f manpage debian/inchi-1.1.txt dh_installman make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' dh_installsystemduser -O--buildsystem=makefile dh_perl -O--buildsystem=makefile dh_link -O--buildsystem=makefile dh_strip_nondeterminism -O--buildsystem=makefile dh_compress -O--buildsystem=makefile dh_fixperms -O--buildsystem=makefile dh_missing -O--buildsystem=makefile dh_dwz -a -O--buildsystem=makefile dwz: debian/libinchi-bin/usr/bin/inchi-1: .debug_info section not present dwz: debian/libinchi-bin/usr/bin/inchi_main: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -a -O--buildsystem=makefile dh_makeshlibs -a -O--buildsystem=makefile dh_shlibdeps -a -O--buildsystem=makefile dh_installdeb -O--buildsystem=makefile dh_gencontrol -O--buildsystem=makefile dh_md5sums -O--buildsystem=makefile dh_builddeb -O--buildsystem=makefile dpkg-deb: building package 'libinchi-dev' in '../libinchi-dev_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07-dbgsym' in '../libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07' in '../libinchi1.07_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi-bin' in '../libinchi-bin_1.07.1+dfsg-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../inchi_1.07.1+dfsg-5_amd64.buildinfo dpkg-genchanges --build=binary -O../inchi_1.07.1+dfsg-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2908337 and its subdirectories I: Current time: Thu Dec 25 04:55:06 +14 2025 I: pbuilder-time-stamp: 1766588106 + false + set +x Wed Dec 24 14:55:06 UTC 2025 I: Signing ./b2/inchi_1.07.1+dfsg-5_amd64.buildinfo as inchi_1.07.1+dfsg-5_amd64.buildinfo.asc Wed Dec 24 14:55:06 UTC 2025 I: Signed ./b2/inchi_1.07.1+dfsg-5_amd64.buildinfo as ./b2/inchi_1.07.1+dfsg-5_amd64.buildinfo.asc Wed Dec 24 14:55:06 UTC 2025 - build #2 for inchi/trixie/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Wed Dec 24 14:55:06 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-C1rmCMUZ, removing. /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h: total 84 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 08:29 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 08:32 b2 -rw-r--r-- 1 jenkins jenkins 2157 Nov 14 14:23 inchi_1.07.1+dfsg-5.dsc -rw------- 1 jenkins jenkins 67819 Nov 21 08:29 rbuildlog.J7Em0ph /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1: total 2644 -rw-r--r-- 1 jenkins jenkins 64257 Nov 21 08:29 build.log -rw-r--r-- 1 jenkins jenkins 6120 Nov 21 08:29 inchi_1.07.1+dfsg-5.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2157 Nov 21 08:29 inchi_1.07.1+dfsg-5.dsc -rw-r--r-- 1 jenkins jenkins 6661 Nov 21 08:29 inchi_1.07.1+dfsg-5_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7543 Nov 21 08:29 inchi_1.07.1+dfsg-5_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2234 Nov 21 08:29 inchi_1.07.1+dfsg-5_amd64.changes -rw-r--r-- 1 jenkins jenkins 1256 Nov 21 08:29 inchi_1.07.1+dfsg-5_source.changes -rw-r--r-- 1 jenkins jenkins 565116 Nov 21 08:29 libinchi-bin_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 19456 Nov 21 08:29 libinchi-dev_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 1443436 Nov 21 08:29 libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 556500 Nov 21 08:29 libinchi1.07_1.07.1+dfsg-5_amd64.deb /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2: total 2632 -rw-r--r-- 1 jenkins jenkins 66203 Nov 21 08:32 build.log -rw-r--r-- 1 jenkins jenkins 6120 Nov 21 08:32 inchi_1.07.1+dfsg-5.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2157 Nov 21 08:32 inchi_1.07.1+dfsg-5.dsc -rw-r--r-- 1 jenkins jenkins 6670 Nov 21 08:32 inchi_1.07.1+dfsg-5_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7552 Nov 21 08:32 inchi_1.07.1+dfsg-5_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2234 Nov 21 08:32 inchi_1.07.1+dfsg-5_amd64.changes -rw-r--r-- 1 jenkins jenkins 1256 Nov 21 08:32 inchi_1.07.1+dfsg-5_source.changes -rw-r--r-- 1 jenkins jenkins 565116 Nov 21 08:32 libinchi-bin_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 19456 Nov 21 08:32 libinchi-dev_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 1443436 Nov 21 08:32 libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb -rw-r--r-- 1 jenkins jenkins 556500 Nov 21 08:32 libinchi1.07_1.07.1+dfsg-5_amd64.deb Thu Nov 21 08:32:07 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Thu Nov 21 08:32:08 UTC 2024 I: inchi_1.07.1+dfsg-5_amd64.changes: Format: 1.8 Date: Thu, 14 Nov 2024 08:37:27 -0500 Source: inchi Binary: libinchi-bin libinchi-dev libinchi1.07 libinchi1.07-dbgsym Architecture: amd64 Version: 1.07.1+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Andrius Merkys Description: libinchi-bin - International Chemical Identifier (InChI) algorithm (executable) libinchi-dev - International Chemical Identifier (InChI) algorithm (development libinchi1.07 - International Chemical Identifier (InChI) algorithm (library) Closes: 1087499 Changes: inchi (1.07.1+dfsg-5) unstable; urgency=medium . * Put $(SHARED_LINK_PARM) in quotes in debian/rules (Closes: #1087499) Checksums-Sha1: 0d56355028de765139a02d5a22b1455669aa0d90 6661 inchi_1.07.1+dfsg-5_amd64.buildinfo 9168392e361191c22b654d90fe38bd247178321f 565116 libinchi-bin_1.07.1+dfsg-5_amd64.deb 6d92770fffc2217a8b361314822151db87bf491a 19456 libinchi-dev_1.07.1+dfsg-5_amd64.deb 49037fba9ac17c53673301c2b2527d0a002ae782 1443436 libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb e18d7b0599c66ae74d120770f0ea0c285dc95935 556500 libinchi1.07_1.07.1+dfsg-5_amd64.deb Checksums-Sha256: f08092d12a80140673f6545ef34815b987580e144303391d69753565841ded68 6661 inchi_1.07.1+dfsg-5_amd64.buildinfo 191955524b917dfa6c7fd7de21dd1fb1906f76c4c89243eb810d8340f5de7a1f 565116 libinchi-bin_1.07.1+dfsg-5_amd64.deb 15dc46e0a82ec3e223244ca38ecc7eaa23de37c21c85290abd882547e8313277 19456 libinchi-dev_1.07.1+dfsg-5_amd64.deb bccd279fd7d375beb6b696419e6fac79aa0457f416211afd99633c4935dbb537 1443436 libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb 22ebfdb21597eca817917a6fadb1a7f55d35e0dfd07623be6c0b622499e6340c 556500 libinchi1.07_1.07.1+dfsg-5_amd64.deb Files: e8485fddf39e51b97f3ebc5867fe84be 6661 science optional inchi_1.07.1+dfsg-5_amd64.buildinfo 2fee81e680c7c59725357a12fd2c21c7 565116 science optional libinchi-bin_1.07.1+dfsg-5_amd64.deb e2922c49fed9d964a0166a18970de23c 19456 libdevel optional libinchi-dev_1.07.1+dfsg-5_amd64.deb aec2c11779aa4602bb50ff0887c98db2 1443436 debug optional libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb a123cbbffea31cecc51ae0b31e8f88f0 556500 libs optional libinchi1.07_1.07.1+dfsg-5_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/inchi_1.07.1+dfsg-5.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/inchi_1.07.1+dfsg-5.rbuild.log.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-21 08:29:53.305645428 +0000 +++ b2/build.log 2024-11-21 08:32:07.411576982 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Nov 20 20:28:13 -12 2024 -I: pbuilder-time-stamp: 1732177693 +I: Current time: Thu Dec 25 04:52:56 +14 2025 +I: pbuilder-time-stamp: 1766587976 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -30,52 +30,84 @@ dpkg-source: info: applying no-RUNPATH.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/973204/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 24 14:53 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='bc28bcc842f74c46be8e2a40dc38b11b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='973204' - PS1='# ' - PS2='> ' + INVOCATION_ID=7c6cc910cde0455f94d3c8a087788a53 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2908337 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_VGd5 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1 --logfile b1/build.log inchi_1.07.1+dfsg-5.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/pbuilderrc_Dzbm --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2 --logfile b2/build.log inchi_1.07.1+dfsg-5.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/973204/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -180,7 +212,7 @@ Get: 59 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 docbook-xml all 4.5-13 [77.4 kB] -Fetched 29.0 MB in 1s (31.9 MB/s) +Fetched 29.0 MB in 11s (2694 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) @@ -397,8 +429,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Nov 21 08:29:10 UTC 2024. -Universal Time is now: Thu Nov 21 08:29:10 UTC 2024. +Local time is now: Wed Dec 24 14:54:21 UTC 2025. +Universal Time is now: Wed Dec 24 14:54:21 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -456,7 +488,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/inchi-1.07.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../inchi_1.07.1+dfsg-5_source.changes +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/inchi-1.07.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../inchi_1.07.1+dfsg-5_source.changes dpkg-buildpackage: info: source package inchi dpkg-buildpackage: info: source version 1.07.1+dfsg-5 dpkg-buildpackage: info: source distribution unstable @@ -486,7 +522,7 @@ mkdir --parents INCHI-1-SRC/INCHI_EXE/bin/Linux # Building inchi_main builds shared library too dh_auto_build -- -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM="-Wl,-z,relro" - make -j20 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM=-Wl,-z,relro + make -j42 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' make[2]: clang: No such file or directory Both GCC and Clang/LLVM detected. Compiling with GCC (default) -- please edit makefile to compile with Clang/LLVM. @@ -511,6 +547,28 @@ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/ichilnct.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimak2.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimake.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap1.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap2.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap4.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichinorm.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiparm.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt1.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt2.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt3.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiqueu.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiring.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichisort.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichister.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichitaut.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_bns.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiread.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr1.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr2.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr3.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr4.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr5.c +cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr6.c ../src/e_ichi_parms.c: In function 'e_HelpCommandLineParms': ../src/e_ichi_parms.c:2654:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, @@ -518,7 +576,6 @@ ../src/e_ichi_parms.c:2654:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2654 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap1.c ../src/e_ichi_parms.c: In function 'e_OpenFiles': ../src/e_ichi_parms.c:2853:76: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2853 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, @@ -538,15 +595,6 @@ ../src/e_ichi_parms.c:2871:86: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2871 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap2.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichimap4.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichinorm.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiparm.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt1.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt2.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiprt3.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiqueu.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiring.c ../../../../INCHI_BASE/src/ichiparm.c: In function 'HelpCommandLineParms': ../../../../INCHI_BASE/src/ichiparm.c:2718:72: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, @@ -554,34 +602,9 @@ ../../../../INCHI_BASE/src/ichiparm.c:2718:82: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 2718 | INCHI_BUILD_PLATFORM, INCHI_BUILD_COMPILER, INCHI_BUILD_DEBUG, __DATE__, __TIME__, | ^~~~~~~~ -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichisort.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichister.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichitaut.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichi_bns.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichiread.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr1.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr2.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr3.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr4.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr5.c -cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr6.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ichirvr7.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_dll.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/ikey_base26.c -In file included from ../../../../INCHI_BASE/src/ichiprt1.c:46: -In function 'OutputINCHI_PolymerLayer', - inlined from 'OutputINChI1' at ../../../../INCHI_BASE/src/ichiprt1.c:1747:31: -../../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] - 1165 | #define inchi_calloc calloc -../../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' - 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); - | ^~~~~~~~~~~~ -In file included from ../../../../INCHI_BASE/src/ichiprt1.c:41: -/usr/include/stdlib.h: In function 'OutputINChI1': -/usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here - 675 | extern void *calloc (size_t __nmemb, size_t __size) - | ^~~~~~ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_main.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../libinchi/src/inchi_dll_a2.c @@ -606,13 +629,26 @@ cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/strutil.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/util.c cc -fPIC -DTARGET_API_LIB -DCOMPILE_ANSI_ONLY -std=c11 -O2 -c -fno-strict-aliasing `dpkg-buildflags --get CPPFLAGS` `dpkg-buildflags --get CFLAGS` ../../../../INCHI_BASE/src/bcf_s.c +In file included from ../../../../INCHI_BASE/src/ichiprt1.c:46: +In function 'OutputINCHI_PolymerLayer', + inlined from 'OutputINChI1' at ../../../../INCHI_BASE/src/ichiprt1.c:1747:31: +../../../../INCHI_BASE/src/mode.h:1165:24: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] + 1165 | #define inchi_calloc calloc +../../../../INCHI_BASE/src/ichiprt1.c:4014:22: note: in expansion of macro 'inchi_calloc' + 4014 | unum = (int*)inchi_calloc(p->n, sizeof(int)); + | ^~~~~~~~~~~~ +In file included from ../../../../INCHI_BASE/src/ichiprt1.c:41: +/usr/include/stdlib.h: In function 'OutputINChI1': +/usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here + 675 | extern void *calloc (size_t __nmemb, size_t __size) + | ^~~~~~ cc -shared -Wl,-z,relro -o ../../../bin/Linux/libinchi.so.1.07 \ ichican2.o ichicano.o ichi_io.o ichierr.o ichicans.o ichiisot.o ichilnct.o ichimak2.o ichimake.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiparm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichi_bns.o inchi_dll.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_dll.o ikey_base26.o inchi_dll_main.o inchi_dll_a.o inchi_dll_a2.o inchi_dll_b.o ixa_inchikey_builder.o ixa_read_mol.o ixa_status.o ixa_builder.o ixa_mol.o ixa_read_inchi.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol2atom.o mol_fmt4.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o bcf_s.o -Wl,--version-script=libinchi.map,-z,relro,-soname,libinchi.so.1.07 -lm cc -s -Wl,-R,"" -Wl,-z,relro -o ../../../bin/Linux/inchi_main e_0dstereo.o e_ichimain.o e_ichi_io.o e_ichi_parms.o e_inchi_atom.o e_mol2atom.o e_readinch.o e_readmol.o e_readstru.o e_util.o e_ichimain_a.o \ ../../../bin/Linux/libinchi.so.1.07 -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_API/demos/inchi_main/gcc' dh_auto_build -- -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM="-Wl,-z,relro" - make -j20 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM=-Wl,-z,relro + make -j42 "INSTALL=install --strip-program=true" -C INCHI-1-SRC/INCHI_EXE/inchi-1/gcc SHARED_LINK_PARM=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[2]: clang: No such file or directory Both GCC/G++ and Clang(++)/LLVM detected. Compiling with GCC/G++ (default) -- please edit makefile to compile with Clang(++)/LLVM. @@ -641,6 +677,30 @@ gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiparm.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichiread.c gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr1.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr2.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr3.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr4.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr5.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr6.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr7.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_base26.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_dll.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt1.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt2.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt3.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt4.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol2atom.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/readinch.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi2.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi3.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi4.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/sha2.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/strutil.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/util.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/dispstru.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/ichimain.c +gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/bcf_s.c In function 'MakeDecNumber', inlined from 'MakeHString' at ../../../INCHI_BASE/src/ichiprt2.c:1008:36: ../../../INCHI_BASE/src/ichiprt2.c:2246:14: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] @@ -650,7 +710,6 @@ ../../../INCHI_BASE/src/ichiprt2.c:802:10: note: at offset -1 into destination object 'szValue' of size 2048 802 | char szValue[2048]; | ^~~~~~~ -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr2.c ../../../INCHI_BASE/src/ichiprt2.c: In function 'MakeCRVString': ../../../INCHI_BASE/src/ichiprt2.c:1426:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1426 | szValue[len++] = 'd'; /* djb-rwth: GCC 14 false positive */ @@ -682,16 +741,6 @@ ../../../INCHI_BASE/src/ichiprt2.c:1318:10: note: at offset -1 into destination object 'szValue' of size 2048 1318 | char szValue[2048] = { 0 }; | ^~~~~~~ -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr3.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr4.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr5.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr6.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ichirvr7.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_base26.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/ikey_dll.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt1.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt2.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt3.c In file included from ../../../INCHI_BASE/src/ichiprt1.c:46: In function 'OutputINCHI_PolymerLayer', inlined from 'OutputINChI1' at ../../../INCHI_BASE/src/ichiprt1.c:1747:31: @@ -705,19 +754,6 @@ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol_fmt4.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/mol2atom.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/readinch.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi2.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi3.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/runichi4.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/sha2.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/strutil.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/util.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/dispstru.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../src/ichimain.c -gcc -I../src -I../../../INCHI_BASE/src -std=c11 -ansi -DCOMPILE_ANSI_ONLY -DTARGET_EXE_STANDALONE -O2 -c -fno-strict-aliasing ../../../INCHI_BASE/src/bcf_s.c g++ -s -o ../../bin/Linux/inchi-1 ichi_bns.o ichi_io.o ichicano.o ichican2.o ichicans.o ichierr.o ichiisot.o ichimake.o ichimak2.o ichimap1.o ichimap2.o ichimap4.o ichinorm.o ichiprt1.o ichiprt2.o ichiprt3.o ichiqueu.o ichiring.o ichisort.o ichister.o ichitaut.o ichiparm.o ichiread.o ichirvr1.o ichirvr2.o ichirvr3.o ichirvr4.o ichirvr5.o ichirvr6.o ichirvr7.o ikey_base26.o ikey_dll.o mol_fmt1.o mol_fmt2.o mol_fmt3.o mol_fmt4.o mol2atom.o readinch.o runichi.o runichi2.o runichi3.o runichi4.o sha2.o strutil.o util.o dispstru.o ichimain.o bcf_s.o -lm make[2]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg/INCHI-1-SRC/INCHI_EXE/inchi-1/gcc' make[1]: Leaving directory '/build/reproducible-path/inchi-1.07.1+dfsg' @@ -766,8 +802,8 @@ dh_md5sums -O--buildsystem=makefile dh_builddeb -O--buildsystem=makefile dpkg-deb: building package 'libinchi-dev' in '../libinchi-dev_1.07.1+dfsg-5_amd64.deb'. -dpkg-deb: building package 'libinchi1.07' in '../libinchi1.07_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi1.07-dbgsym' in '../libinchi1.07-dbgsym_1.07.1+dfsg-5_amd64.deb'. +dpkg-deb: building package 'libinchi1.07' in '../libinchi1.07_1.07.1+dfsg-5_amd64.deb'. dpkg-deb: building package 'libinchi-bin' in '../libinchi-bin_1.07.1+dfsg-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../inchi_1.07.1+dfsg-5_amd64.buildinfo dpkg-genchanges --build=binary -O../inchi_1.07.1+dfsg-5_amd64.changes @@ -776,12 +812,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2908337/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/973204 and its subdirectories -I: Current time: Wed Nov 20 20:29:52 -12 2024 -I: pbuilder-time-stamp: 1732177792 +I: removing directory /srv/workspace/pbuilder/2908337 and its subdirectories +I: Current time: Thu Dec 25 04:55:06 +14 2025 +I: pbuilder-time-stamp: 1766588106 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/inchi_1.07.1+dfsg-5.diff: 83.9% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/inchi_1.07.1+dfsg-5.diff.gz b2/build.log: 84.6% -- replaced with stdout Compressing the 1st log... b1/build.log: 85.2% -- replaced with stdout Thu Nov 21 08:32:09 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_inchi_trixie_amd64_1732177929 + touch /var/log/reproducible-builds/diffoscope_stamp_inchi_trixie_amd64_1732177929 + RESULT=0 + systemd-run '--description=diffoscope on inchi/1.07.1+dfsg-5 in trixie/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_23-39044 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h --run-session -c jenkins-reproducible-trixie-diffoscope-b4bb7f7b-a768-4fd3-936b-d698c9c48af5 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/dbd-tmp-3iu0QfQ ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/inchi_1.07.1+dfsg-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/inchi_1.07.1+dfsg-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/inchi_1.07.1+dfsg-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1/inchi_1.07.1+dfsg-5_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2/inchi_1.07.1+dfsg-5_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_23-39044.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/inchi_1.07.1+dfsg-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/inchi_1.07.1+dfsg-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/inchi_1.07.1+dfsg-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b1/inchi_1.07.1+dfsg-5_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.JuQHFe7h/b2/inchi_1.07.1+dfsg-5_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.380s) 0.380s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.049s) 0.049s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 700ms CPU time consumed: 698ms _ _ _ (_)_ __ ___| |__ (_) | | '_ \ / __| '_ \| | | | | | | (__| | | | | |_|_| |_|\___|_| |_|_| Thu Nov 21 08:32:10 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Thu Nov 21 08:32:10 UTC 2024 I: inchi from trixie built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-21 08:32:10] INFO: Starting at 2024-11-21 08:32:10.766839 [2024-11-21 08:32:10] INFO: Generating the pages of 1 package(s) [2024-11-21 08:32:11] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/amd64/inchi didn't produce a buildlog, even though it has been built. [2024-11-21 08:32:11] INFO: Finished at 2024-11-21 08:32:11.231217, took: 0:00:00.464388 Thu Nov 21 08:32:11 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/amd64/inchi.html Thu Nov 21 08:32:11 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Nov 21 08:32:11 UTC 2024 I: Submitting 8.0K b1/inchi_1.07.1+dfsg-5_amd64.buildinfo.asc https://buildinfo.debian.net/0d56355028de765139a02d5a22b1455669aa0d90/inchi_1.07.1+dfsg-5_amd64 Thu Nov 21 08:32:12 UTC 2024 I: Submitting 8.0K b2/inchi_1.07.1+dfsg-5_amd64.buildinfo.asc https://buildinfo.debian.net/d01c6f27dc4925eb35ed8657882d1a75449890bb/inchi_1.07.1+dfsg-5_amd64 Thu Nov 21 08:32:12 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Nov 21 08:32:12 UTC 2024 I: Done submitting .buildinfo files. Thu Nov 21 08:32:12 UTC 2024 I: Removing signed inchi_1.07.1+dfsg-5_amd64.buildinfo.asc files: removed './b1/inchi_1.07.1+dfsg-5_amd64.buildinfo.asc' removed './b2/inchi_1.07.1+dfsg-5_amd64.buildinfo.asc' 1732177932 amd64 trixie inchi Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/inchi_1.07.1+dfsg-5.rbuild.log: 82.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/inchi_1.07.1+dfsg-5.rbuild.log.gz [2024-11-21 08:32:13] INFO: Starting at 2024-11-21 08:32:13.262438 [2024-11-21 08:32:13] INFO: Generating the pages of 1 package(s) [2024-11-21 08:32:13] INFO: Finished at 2024-11-21 08:32:13.610188, took: 0:00:00.347757 All cleanup done. Thu Nov 21 08:32:13 UTC 2024 - total duration: 0h 4m 21s. Thu Nov 21 08:32:13 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-DmVgE5R2, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 4min 24.357s CPU time consumed: 7.314s