Running as unit: rb-build-amd64_24-41116.service ==================================================================================== Sun Nov 24 11:34:30 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_24) on jenkins, called using "ionos15-amd64 ionos11-amd64" as arguments. Sun Nov 24 11:34:30 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-zl7Tpt54" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Nov 24 11:34:30 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Sun Nov 24 11:34:30 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-MFw7PB' Sun Nov 24 11:34:30 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sun Nov 24 11:34:30 UTC 2024 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-SuMR7S' ok, let's check if libbio-db-refseq-perl is building anywhere yet… ok, libbio-db-refseq-perl is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of libbio-db-refseq-perl in unstable on amd64 on jenkins now. 1st build will be done on ionos15-amd64.debian.net. 2nd build will be done on ionos11-amd64.debian.net. ============================================================================= Sun Nov 24 11:34:44 UTC 2024 I: starting to build libbio-db-refseq-perl/unstable/amd64 on jenkins on '2024-11-24 11:34' Sun Nov 24 11:34:44 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_24/41116/console.log 1732448084 amd64 unstable libbio-db-refseq-perl Sun Nov 24 11:34:44 UTC 2024 I: Downloading source for unstable/libbio-db-refseq-perl=1.7.4-1 --2024-11-24 11:34:44-- http://deb.debian.org/debian/pool/main/libb/libbio-db-refseq-perl/libbio-db-refseq-perl_1.7.4-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2222 (2.2K) [text/prs.lines.tag] Saving to: ‘libbio-db-refseq-perl_1.7.4-1.dsc’ 0K .. 100% 236M=0s 2024-11-24 11:34:44 (236 MB/s) - ‘libbio-db-refseq-perl_1.7.4-1.dsc’ saved [2222/2222] --2024-11-24 11:34:44-- http://deb.debian.org/debian/pool/main/libb/libbio-db-refseq-perl/libbio-db-refseq-perl_1.7.4-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2222 (2.2K) [text/prs.lines.tag] Saving to: ‘libbio-db-refseq-perl_1.7.4-1.dsc’ 0K .. 100% 236M=0s 2024-11-24 11:34:44 (236 MB/s) - ‘libbio-db-refseq-perl_1.7.4-1.dsc’ saved [2222/2222] Sun Nov 24 11:34:44 UTC 2024 I: libbio-db-refseq-perl_1.7.4-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: all Version: 1.7.4-1 Maintainer: Debian Med team Uploaders: Michael R. Crusoe Homepage: https://metacpan.org/release/Bio-DB-RefSeq Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-refseq-perl Vcs-Git: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 12) Build-Depends-Indep: libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl Package-List: libbio-db-refseq-perl deb perl optional arch=all Checksums-Sha1: 3f19baaa6b61630152b8d4973ed32adb720cc786 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz 948494d6b42f99345b70c851456859c0d370a6b5 1892 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz Checksums-Sha256: f3f4e44827cc86af9c2486c63935474951fde7f8647d2edc0c3a18c23640feab 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz cade30ba7e2d7005785024f00a87e56f3b0606695e032e2ec318c5019497a28d 1892 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz Files: 0cfdbfd77e868e39387a7014094b9d58 13741 libbio-db-refseq-perl_1.7.4.orig.tar.gz 0d15335c68c24d26635490cb815aec40 1892 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl4KXO4ACgkQPCZ2P2xn 5uJCOBAAyR1HV0uoqPcQZ32SE26nNwYn2CxL+Hj9oNMHfk9Ym+Pym/Hr+mBkLNZ0 3XMzXug8g46SDV8YFXUuH+HzclHZcjL1Aw8JXBBl2/iK2mnTFoZ83+I6Ts/FuR4X 3D5yOzCGRhECKh8ikzdBoyL6il8uSu5TP5pasSuABO1CdNVqV9m2g0WDyHSKK6NF HG5v6FUR1Jevp8tw6ozPf4frQyVm88wu+7tA/RYGL4YAk6+nvOWxS91hRHHbkzPH kq5m8rs+sngntv4luv00qjiv6RgN/rPw3jz6Fgxm/AFgppLOUd+/eVOMlRWVKJGX G2M/H5dDjlWWKhj54woaEybU5IAiqFHPeT4sGTWUhZO701+icdzRs+M6UmOTW09R 6i/Ip5YNwIQ+PVSXVOdPyRsDPAd3VPDfdYG9osQMdrCJhn4bFfRTtWJpZpTo6ojJ T7eSg35O28iSUu7/GQU2tPuZNFCrLcdMIihQzmdSjjGa2lidPfG3d73twUioA6bn pUK92yOYmHl7G2TdjCnAlCN1ZPsv4eLRM23KjResS/GJdhNZYO+hhKflGup4yhE+ SyqFPLCuXqjK92fpsMgT7EGMIju2yCM2cXPznO9IMmqskJo2bWzwjumUaKLgWBHz Vibo8kp7ob4a50uOiH5qC2GRw4zNm11WKnAOXWd1eZeqsipK79U= =z3fE -----END PGP SIGNATURE----- Sun Nov 24 11:34:44 UTC 2024 I: Checking whether the package is not for us Sun Nov 24 11:34:44 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Sun Nov 24 11:34:44 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Sun Nov 24 11:34:44 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Sun Nov 24 11:34:44 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-NdOKil' ==================================================================================== Sat Dec 27 17:57:43 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "1 libbio-db-refseq-perl unstable /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O 1.7.4-1" as arguments. Sat Dec 27 17:57:43 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-yrx8xzi3" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Dec 27 17:57:43 UTC 2025 I: Downloading source for unstable/libbio-db-refseq-perl=1.7.4-1 Reading package lists... NOTICE: 'libbio-db-refseq-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Please use: git clone https://salsa.debian.org/med-team/libbio-db-refseq-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 17.9 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (dsc) [2222 B] Get:2 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (tar) [13.7 kB] Get:3 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (diff) [1892 B] Fetched 17.9 kB in 0s (442 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libbio-db-refseq-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Please use: git clone https://salsa.debian.org/med-team/libbio-db-refseq-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 17.9 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (dsc) [2222 B] Get:2 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (tar) [13.7 kB] Get:3 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (diff) [1892 B] Fetched 17.9 kB in 0s (442 kB/s) Download complete and in download only mode ============================================================================= Building libbio-db-refseq-perl in unstable on amd64 on ionos15-amd64 now. Date: Sat Dec 27 17:57:43 UTC 2025 Date UTC: Sat Dec 27 17:57:43 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Dec 27 05:57:43 -12 2025 I: pbuilder-time-stamp: 1766858263 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-db-refseq-perl_1.7.4-1.dsc] I: copying [./libbio-db-refseq-perl_1.7.4.orig.tar.gz] I: copying [./libbio-db-refseq-perl_1.7.4-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 30 20:24:14 2019 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-db-refseq-perl_1.7.4-1.dsc: no acceptable signature found dpkg-source: info: extracting libbio-db-refseq-perl in libbio-db-refseq-perl-1.7.4 dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3772614/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='85b1b2ba12f24b4cbf7fb677c308f08d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3772614' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_HT7C --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1 --logfile b1/build.log libbio-db-refseq-perl_1.7.4-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3772614/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-most-perl; however: Package libtest-most-perl is not installed. pbuilder-satisfydepends-dummy depends on libhttp-message-perl; however: Package libhttp-message-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-requiresinternet-perl; however: Package libtest-requiresinternet-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-needs-perl; however: Package libtest-needs-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-needs-perl{a} libtest-requiresinternet-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 26.3 MB of archives. After unpacking 93.2 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 25 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get: 39 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 56 http://deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libtest-needs-perl all 0.002010-1 [9352 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Fetched 26.3 MB in 4s (7080 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... 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Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.20) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libtest-needs-perl (0.002010-1) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up netbase (6.4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.3.2-2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libtool (2.4.7-8) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Setting up libwww-perl (6.77-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libbio-db-refseq-perl-1.7.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-db-refseq-perl_1.7.4-1_source.changes dpkg-buildpackage: info: source package libbio-db-refseq-perl dpkg-buildpackage: info: source version 1.7.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::RefSeq Writing MYMETA.yml and MYMETA.json dh_auto_build make -j42 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' cp lib/Bio/DB/RefSeq.pm blib/lib/Bio/DB/RefSeq.pm Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_auto_test make -j42 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..1 ok 1 - Bio/DB/RefSeq.pm loaded ok ok t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/RefSeq.t ............... skipped: no host: www.google.com All tests successful. Files=5, Tests=1, 1 wallclock secs ( 0.03 usr 0.00 sys + 0.25 cusr 0.05 csys = 0.33 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-db-refseq-perl/ make -j42 install DESTDIR=/build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' Manifying 1 pod document Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/perl5/Bio/DB/RefSeq.pm Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/man/man3/Bio::DB::RefSeq.3pm make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-refseq-perl' in '../libbio-db-refseq-perl_1.7.4-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libbio-db-refseq-perl_1.7.4-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3772614 and its subdirectories I: Current time: Sat Dec 27 05:58:24 -12 2025 I: pbuilder-time-stamp: 1766858304 Sat Dec 27 17:58:24 UTC 2025 I: Signing ./b1/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo as libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc Sat Dec 27 17:58:24 UTC 2025 I: Signed ./b1/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo as ./b1/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc Sat Dec 27 17:58:24 UTC 2025 - build #1 for libbio-db-refseq-perl/unstable/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Sat Dec 27 17:58:24 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-yrx8xzi3, removing. /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:35 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:34 b2 -rw-r--r-- 1 jenkins jenkins 2222 Dec 30 2019 libbio-db-refseq-perl_1.7.4-1.dsc -rw------- 1 jenkins jenkins 3425 Nov 24 11:34 rbuildlog.MJ7l3cb /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1: total 92 -rw-r--r-- 1 jenkins jenkins 36212 Nov 24 11:35 build.log -rw-r--r-- 1 jenkins jenkins 1892 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2222 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1.dsc -rw-r--r-- 1 jenkins jenkins 7268 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_all.deb -rw-r--r-- 1 jenkins jenkins 6133 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7015 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1115 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1588 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_source.changes -rw-r--r-- 1 jenkins jenkins 13741 Nov 24 11:35 libbio-db-refseq-perl_1.7.4.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2: total 0 Sun Nov 24 11:35:27 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Dec 27 05:57:43 -12 2025 I: pbuilder-time-stamp: 1766858263 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-db-refseq-perl_1.7.4-1.dsc] I: copying [./libbio-db-refseq-perl_1.7.4.orig.tar.gz] I: copying [./libbio-db-refseq-perl_1.7.4-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 30 20:24:14 2019 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-db-refseq-perl_1.7.4-1.dsc: no acceptable signature found dpkg-source: info: extracting libbio-db-refseq-perl in libbio-db-refseq-perl-1.7.4 dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3772614/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='85b1b2ba12f24b4cbf7fb677c308f08d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3772614' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_HT7C --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1 --logfile b1/build.log libbio-db-refseq-perl_1.7.4-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3772614/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-most-perl; however: Package libtest-most-perl is not installed. pbuilder-satisfydepends-dummy depends on libhttp-message-perl; however: Package libhttp-message-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-requiresinternet-perl; however: Package libtest-requiresinternet-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-needs-perl; however: Package libtest-needs-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-needs-perl{a} libtest-requiresinternet-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 26.3 MB of archives. After unpacking 93.2 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 25 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get: 39 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 56 http://deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libtest-needs-perl all 0.002010-1 [9352 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Fetched 26.3 MB in 4s (7080 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... 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Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.20) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libtest-needs-perl (0.002010-1) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up netbase (6.4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.3.2-2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libtool (2.4.7-8) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Setting up libwww-perl (6.77-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libbio-db-refseq-perl-1.7.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-db-refseq-perl_1.7.4-1_source.changes dpkg-buildpackage: info: source package libbio-db-refseq-perl dpkg-buildpackage: info: source version 1.7.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::RefSeq Writing MYMETA.yml and MYMETA.json dh_auto_build make -j42 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' cp lib/Bio/DB/RefSeq.pm blib/lib/Bio/DB/RefSeq.pm Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_auto_test make -j42 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..1 ok 1 - Bio/DB/RefSeq.pm loaded ok ok t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/RefSeq.t ............... skipped: no host: www.google.com All tests successful. Files=5, Tests=1, 1 wallclock secs ( 0.03 usr 0.00 sys + 0.25 cusr 0.05 csys = 0.33 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-db-refseq-perl/ make -j42 install DESTDIR=/build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' Manifying 1 pod document Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/perl5/Bio/DB/RefSeq.pm Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/man/man3/Bio::DB::RefSeq.3pm make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-refseq-perl' in '../libbio-db-refseq-perl_1.7.4-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libbio-db-refseq-perl_1.7.4-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3772614 and its subdirectories I: Current time: Sat Dec 27 05:58:24 -12 2025 I: pbuilder-time-stamp: 1766858304 Sun Nov 24 11:35:27 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Sun Nov 24 11:35:27 UTC 2024 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Sun Nov 24 11:35:27 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sun Nov 24 11:35:27 UTC 2024 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-KRRYOn' ==================================================================================== Sun Nov 24 11:35:29 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "2 libbio-db-refseq-perl unstable /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O 1.7.4-1" as arguments. Sun Nov 24 11:35:29 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-bWbctUeg" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Nov 24 11:35:29 UTC 2024 I: Downloading source for unstable/libbio-db-refseq-perl=1.7.4-1 Reading package lists... NOTICE: 'libbio-db-refseq-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Please use: git clone https://salsa.debian.org/med-team/libbio-db-refseq-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 17.9 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (dsc) [2222 B] Get:2 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (tar) [13.7 kB] Get:3 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (diff) [1892 B] Fetched 17.9 kB in 0s (454 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libbio-db-refseq-perl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbio-db-refseq-perl.git Please use: git clone https://salsa.debian.org/med-team/libbio-db-refseq-perl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 17.9 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (dsc) [2222 B] Get:2 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (tar) [13.7 kB] Get:3 http://deb.debian.org/debian unstable/main libbio-db-refseq-perl 1.7.4-1 (diff) [1892 B] Fetched 17.9 kB in 0s (454 kB/s) Download complete and in download only mode ============================================================================= Re-Building libbio-db-refseq-perl in unstable on amd64 on ionos11-amd64 now. Date: Sun Nov 24 11:35:29 UTC 2024 Date UTC: Sun Nov 24 11:35:29 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_td4c + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' libbio-db-refseq-perl = debian-installer -o libbio-db-refseq-perl = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' libbio-db-refseq-perl = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_td4c --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2 --logfile b2/build.log libbio-db-refseq-perl_1.7.4-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Mon Nov 25 01:35:29 +14 2024 I: pbuilder-time-stamp: 1732448129 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-db-refseq-perl_1.7.4-1.dsc] I: copying [./libbio-db-refseq-perl_1.7.4.orig.tar.gz] I: copying [./libbio-db-refseq-perl_1.7.4-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 30 20:24:14 2019 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-db-refseq-perl_1.7.4-1.dsc: no acceptable signature found dpkg-source: info: extracting libbio-db-refseq-perl in libbio-db-refseq-perl-1.7.4 dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4.orig.tar.gz dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 24 11:35 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=1c83437873a5451e9e68984f20d9affb LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3985405 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_td4c --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2 --logfile b2/build.log libbio-db-refseq-perl_1.7.4-1.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libbio-perl-perl, libtest-most-perl, libhttp-message-perl, libwww-perl, libtest-requiresinternet-perl, libtest-needs-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-most-perl; however: Package libtest-most-perl is not installed. pbuilder-satisfydepends-dummy depends on libhttp-message-perl; however: Package libhttp-message-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-requiresinternet-perl; however: Package libtest-requiresinternet-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-needs-perl; however: Package libtest-needs-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-needs-perl{a} libtest-requiresinternet-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 26.3 MB of archives. After unpacking 93.2 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 25 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get: 39 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 56 http://deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libtest-needs-perl all 0.002010-1 [9352 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Fetched 26.3 MB in 3s (9500 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... 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Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.20) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libtest-needs-perl (0.002010-1) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up netbase (6.4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.3.2-2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libtool (2.4.7-8) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Setting up libwww-perl (6.77-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/libbio-db-refseq-perl-1.7.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-db-refseq-perl_1.7.4-1_source.changes dpkg-buildpackage: info: source package libbio-db-refseq-perl dpkg-buildpackage: info: source version 1.7.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2" "LD=x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-refseq-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::RefSeq Writing MYMETA.yml and MYMETA.json dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' cp lib/Bio/DB/RefSeq.pm blib/lib/Bio/DB/RefSeq.pm Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_auto_test make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..1 ok 1 - Bio/DB/RefSeq.pm loaded ok ok t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/RefSeq.t ............... skipped: no host: www.google.com All tests successful. Files=5, Tests=1, 1 wallclock secs ( 0.04 usr 0.01 sys + 0.43 cusr 0.12 csys = 0.60 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-db-refseq-perl/ make -j20 install DESTDIR=/build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' Manifying 1 pod document Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/perl5/Bio/DB/RefSeq.pm Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/man/man3/Bio::DB::RefSeq.3pm make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-refseq-perl' in '../libbio-db-refseq-perl_1.7.4-1_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo dpkg-genchanges --build=binary -O../libbio-db-refseq-perl_1.7.4-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3985405 and its subdirectories I: Current time: Mon Nov 25 01:36:51 +14 2024 I: pbuilder-time-stamp: 1732448211 + false + set +x Sun Nov 24 11:36:51 UTC 2024 I: Signing ./b2/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo as libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc Sun Nov 24 11:36:51 UTC 2024 I: Signed ./b2/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo as ./b2/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc Sun Nov 24 11:36:51 UTC 2024 - build #2 for libbio-db-refseq-perl/unstable/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Sun Nov 24 11:36:51 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-bWbctUeg, removing. /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O: total 52 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:35 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:36 b2 -rw-r--r-- 1 jenkins jenkins 2222 Dec 30 2019 libbio-db-refseq-perl_1.7.4-1.dsc -rw------- 1 jenkins jenkins 39926 Nov 24 11:35 rbuildlog.MJ7l3cb /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1: total 92 -rw-r--r-- 1 jenkins jenkins 36212 Nov 24 11:35 build.log -rw-r--r-- 1 jenkins jenkins 1892 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2222 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1.dsc -rw-r--r-- 1 jenkins jenkins 7268 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_all.deb -rw-r--r-- 1 jenkins jenkins 6133 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7015 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1115 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1588 Nov 24 11:35 libbio-db-refseq-perl_1.7.4-1_source.changes -rw-r--r-- 1 jenkins jenkins 13741 Nov 24 11:35 libbio-db-refseq-perl_1.7.4.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2: total 96 -rw-r--r-- 1 jenkins jenkins 38133 Nov 24 11:36 build.log -rw-r--r-- 1 jenkins jenkins 1892 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2222 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1.dsc -rw-r--r-- 1 jenkins jenkins 7268 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1_all.deb -rw-r--r-- 1 jenkins jenkins 6124 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7006 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1115 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 1588 Nov 24 11:36 libbio-db-refseq-perl_1.7.4-1_source.changes -rw-r--r-- 1 jenkins jenkins 13741 Nov 24 11:36 libbio-db-refseq-perl_1.7.4.orig.tar.gz Sun Nov 24 11:36:52 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Sun Nov 24 11:36:52 UTC 2024 I: libbio-db-refseq-perl_1.7.4-1_amd64.changes: Format: 1.8 Date: Mon, 30 Dec 2019 21:21:28 +0100 Source: libbio-db-refseq-perl Binary: libbio-db-refseq-perl Architecture: all Version: 1.7.4-1 Distribution: unstable Urgency: medium Maintainer: Debian Med team Changed-By: Michael R. Crusoe Description: libbio-db-refseq-perl - Database object interface for RefSeq retrieval Changes: libbio-db-refseq-perl (1.7.4-1) unstable; urgency=medium . * New upstream version Checksums-Sha1: dabcbaf6a377088ecf0eec0617aeee69925cc6c6 7268 libbio-db-refseq-perl_1.7.4-1_all.deb dbc2a78cab8b6e380bc8053e09af94549a827b85 6133 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo Checksums-Sha256: a20c3a17ce3a84dd12a6f1b2965265ebffaa94fe7ce6aa36657de380fd854666 7268 libbio-db-refseq-perl_1.7.4-1_all.deb c904a5cb018fefe0346a0a833ad4156c9f258bf10aad0f2623e7db27de7568ee 6133 libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo Files: 6652298c466b44165250bd65b2ecccf0 7268 perl optional libbio-db-refseq-perl_1.7.4-1_all.deb 0ae26dbeef4a6e178bd31fe7825d525d 6133 perl optional libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/amd64/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-24 11:35:27.305372725 +0000 +++ b2/build.log 2024-11-24 11:36:52.213529924 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Dec 27 05:57:43 -12 2025 -I: pbuilder-time-stamp: 1766858263 +I: Current time: Mon Nov 25 01:35:29 +14 2024 +I: pbuilder-time-stamp: 1732448129 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: unpacking libbio-db-refseq-perl_1.7.4-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3772614/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 24 11:35 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='85b1b2ba12f24b4cbf7fb677c308f08d' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3772614' - PS1='# ' - PS2='> ' + INVOCATION_ID=1c83437873a5451e9e68984f20d9affb + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3985405 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_HT7C --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1 --logfile b1/build.log libbio-db-refseq-perl_1.7.4-1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/pbuilderrc_td4c --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2 --logfile b2/build.log libbio-db-refseq-perl_1.7.4-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3772614/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -189,7 +221,7 @@ Get: 69 http://deb.debian.org/debian unstable/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libtest-needs-perl all 0.002010-1 [9352 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] -Fetched 26.3 MB in 4s (7080 kB/s) +Fetched 26.3 MB in 3s (9500 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) @@ -500,7 +532,11 @@ fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/libbio-db-refseq-perl-1.7.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-db-refseq-perl_1.7.4-1_source.changes +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbio-db-refseq-perl-1.7.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbio-db-refseq-perl_1.7.4-1_source.changes dpkg-buildpackage: info: source package libbio-db-refseq-perl dpkg-buildpackage: info: source version 1.7.4-1 dpkg-buildpackage: info: source distribution unstable @@ -522,13 +558,13 @@ Writing Makefile for Bio::DB::RefSeq Writing MYMETA.yml and MYMETA.json dh_auto_build - make -j42 + make -j20 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' cp lib/Bio/DB/RefSeq.pm blib/lib/Bio/DB/RefSeq.pm Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' dh_auto_test - make -j42 test TEST_VERBOSE=1 + make -j20 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... @@ -540,7 +576,7 @@ t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/RefSeq.t ............... skipped: no host: www.google.com All tests successful. -Files=5, Tests=1, 1 wallclock secs ( 0.03 usr 0.00 sys + 0.25 cusr 0.05 csys = 0.33 CPU) +Files=5, Tests=1, 1 wallclock secs ( 0.04 usr 0.01 sys + 0.43 cusr 0.12 csys = 0.60 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' create-stamp debian/debhelper-build-stamp @@ -549,7 +585,7 @@ dh_testroot dh_prep dh_auto_install --destdir=debian/libbio-db-refseq-perl/ - make -j42 install DESTDIR=/build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr + make -j20 install DESTDIR=/build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-db-refseq-perl-1.7.4' Manifying 1 pod document Installing /build/reproducible-path/libbio-db-refseq-perl-1.7.4/debian/libbio-db-refseq-perl/usr/share/perl5/Bio/DB/RefSeq.pm @@ -576,12 +612,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3985405/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3772614 and its subdirectories -I: Current time: Sat Dec 27 05:58:24 -12 2025 -I: pbuilder-time-stamp: 1766858304 +I: removing directory /srv/workspace/pbuilder/3985405 and its subdirectories +I: Current time: Mon Nov 25 01:36:51 +14 2024 +I: pbuilder-time-stamp: 1732448211 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.diff: 67.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.diff.gz b2/build.log: 77.5% -- replaced with stdout Compressing the 1st log... b1/build.log: 78.0% -- replaced with stdout Sun Nov 24 11:36:54 UTC 2024 I: W: /var/lib/schroot/session/jenkins-reproducible-trixie-diffoscope-21ce715a-860c-416b-8362-7d1de080e128: Failed to stat file: No such file or directory diffoscope 283 will be used to compare the two builds: /tmp/jenkins-script-zl7Tpt54: line 377: [: /var/lib/schroot/session/jenkins-reproducible-trixie-diffoscope-21ce715a-860c-416b-8362-7d1de080e128: 283: integer expression expected ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_libbio-db-refseq-perl_unstable_amd64_1732448214 + touch /var/log/reproducible-builds/diffoscope_stamp_libbio-db-refseq-perl_unstable_amd64_1732448214 + RESULT=0 + systemd-run '--description=diffoscope on libbio-db-refseq-perl/1.7.4-1 in unstable/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_24-41116 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O --run-session -c jenkins-reproducible-unstable-diffoscope-e6967829-bc4e-459b-81d2-13d8845fa457 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/dbd-tmp-alPBRSD ; timeout 150m diffoscope --html /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/libbio-db-refseq-perl_1.7.4-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/libbio-db-refseq-perl_1.7.4-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/libbio-db-refseq-perl_1.7.4-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1/libbio-db-refseq-perl_1.7.4-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2/libbio-db-refseq-perl_1.7.4-1_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_24-41116.service # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/libbio-db-refseq-perl_1.7.4-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/libbio-db-refseq-perl_1.7.4-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/libbio-db-refseq-perl_1.7.4-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b1/libbio-db-refseq-perl_1.7.4-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.XkGki06O/b2/libbio-db-refseq-perl_1.7.4-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.381s) 0.381s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.019s) 0.019s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 819ms CPU time consumed: 816ms _ _ _ _ _ _ _ __ | (_) |__ | |__ (_) ___ __| | |__ _ __ ___ / _|___ ___ __ _ | | | '_ \| '_ \| |/ _ \ _____ / _` | '_ \ _____| '__/ _ \ |_/ __|/ _ \/ _` | | | | |_) | |_) | | (_) |_____| (_| | |_) |_____| | | __/ _\__ \ __/ (_| | |_|_|_.__/|_.__/|_|\___/ \__,_|_.__/ |_| \___|_| |___/\___|\__, | |_| _ _ __ ___ _ __| | _____| '_ \ / _ \ '__| | |_____| |_) | __/ | | | | .__/ \___|_| |_| |_| Sun Nov 24 11:36:55 UTC 2024 I: W: /var/lib/schroot/session/jenkins-reproducible-trixie-diffoscope-21ce715a-860c-416b-8362-7d1de080e128: Failed to stat file: No such file or directory diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Sun Nov 24 11:36:55 UTC 2024 I: libbio-db-refseq-perl from unstable built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-24 11:36:56] INFO: Starting at 2024-11-24 11:36:56.092906 [2024-11-24 11:36:56] INFO: Generating the pages of 1 package(s) [2024-11-24 11:36:56] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/libbio-db-refseq-perl didn't produce a buildlog, even though it has been built. [2024-11-24 11:36:56] INFO: Finished at 2024-11-24 11:36:56.500095, took: 0:00:00.407198 Sun Nov 24 11:36:56 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/libbio-db-refseq-perl.html Sun Nov 24 11:36:56 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Nov 24 11:36:56 UTC 2024 I: Submitting 8.0K b1/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc https://buildinfo.debian.net/dbc2a78cab8b6e380bc8053e09af94549a827b85/libbio-db-refseq-perl_1.7.4-1_all Sun Nov 24 11:36:57 UTC 2024 I: Submitting 8.0K b2/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc https://buildinfo.debian.net/59a3259063a4358ee04c2fe0bcef6d590e35ecf6/libbio-db-refseq-perl_1.7.4-1_all Sun Nov 24 11:36:58 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Nov 24 11:36:58 UTC 2024 I: Done submitting .buildinfo files. Sun Nov 24 11:36:58 UTC 2024 I: Removing signed libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc files: removed './b1/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc' removed './b2/libbio-db-refseq-perl_1.7.4-1_amd64.buildinfo.asc' 1732448218 amd64 unstable libbio-db-refseq-perl Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.rbuild.log: 75.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/libbio-db-refseq-perl_1.7.4-1.rbuild.log.gz [2024-11-24 11:36:58] INFO: Starting at 2024-11-24 11:36:58.859634 [2024-11-24 11:36:58] INFO: Generating the pages of 1 package(s) [2024-11-24 11:36:59] INFO: Finished at 2024-11-24 11:36:59.288225, took: 0:00:00.428600 All cleanup done. Sun Nov 24 11:36:59 UTC 2024 - total duration: 0h 2m 25s. Sun Nov 24 11:36:59 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-zl7Tpt54, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 29.035s CPU time consumed: 7.952s