Running as unit: rb-build-amd64_27-39916.service ==================================================================================== Sun Nov 24 11:13:44 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_27) on jenkins, called using "ionos11-amd64 ionos15-amd64" as arguments. Sun Nov 24 11:13:44 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-msUJZMgT" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Nov 24 11:13:44 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sun Nov 24 11:13:44 UTC 2024 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-noxbzP' Sun Nov 24 11:13:45 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Sun Nov 24 11:13:45 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-wbP59X' ok, let's check if lastz is building anywhere yet… ok, lastz is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of lastz in unstable on amd64 on jenkins now. 1st build will be done on ionos11-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Sun Nov 24 11:14:06 UTC 2024 I: starting to build lastz/unstable/amd64 on jenkins on '2024-11-24 11:13' Sun Nov 24 11:14:06 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_27/39916/console.log 1732446846 amd64 unstable lastz Sun Nov 24 11:14:06 UTC 2024 I: Downloading source for unstable/lastz=1.04.22-2 --2024-11-24 11:14:07-- http://deb.debian.org/debian/pool/main/l/lastz/lastz_1.04.22-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2025 (2.0K) [text/prs.lines.tag] Saving to: ‘lastz_1.04.22-2.dsc’ 0K . 100% 290M=0s 2024-11-24 11:14:07 (290 MB/s) - ‘lastz_1.04.22-2.dsc’ saved [2025/2025] --2024-11-24 11:14:07-- http://deb.debian.org/debian/pool/main/l/lastz/lastz_1.04.22-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2025 (2.0K) [text/prs.lines.tag] Saving to: ‘lastz_1.04.22-2.dsc’ 0K . 100% 290M=0s 2024-11-24 11:14:07 (290 MB/s) - ‘lastz_1.04.22-2.dsc’ saved [2025/2025] Sun Nov 24 11:14:07 UTC 2024 I: lastz_1.04.22-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: lastz Binary: lastz, lastz-examples Architecture: any all Version: 1.04.22-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/lastz/lastz Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/lastz Vcs-Git: https://salsa.debian.org/med-team/lastz.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3 Package-List: lastz deb science optional arch=any lastz-examples deb science optional arch=all Checksums-Sha1: f08e55a29fc8b5443d5c37570990260bfe976a35 5367940 lastz_1.04.22.orig.tar.gz f87d1dc400a6d516f36de9465659df7bafb0888a 9220 lastz_1.04.22-2.debian.tar.xz Checksums-Sha256: 4c829603ba4aed7ddf64255b528cd88850e4557382fca29580d3576c25c5054a 5367940 lastz_1.04.22.orig.tar.gz b199838aeb529e1ba388dee38bf4b52386ecdb56023b7b6246d0a99b8cd262d8 9220 lastz_1.04.22-2.debian.tar.xz Files: 13c180933359b2472a6c32744f912dfc 5367940 lastz_1.04.22.orig.tar.gz 15c148fd9fcd646a65d0fe23ec45ac6e 9220 lastz_1.04.22-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmN3bGARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtETdg/9G8sCpH1e1ibU1Z1kRaQRJxKhOy1o0y51 2C3uiXTNmyf3cRrKCNLqLVMDg8R3SqshuTWwiuEjDQDophuBCpHWc7FRlsV2KorQ 5IOTbDH5VXEbu8Hjv/Eisz1WJqnC1QCRNdBJUydNWQgiFqk8kZKKMrFlrJlYwkiA tOZjANJyxZc02YpgyujLgyc2e/dlPC7eMVP7pCqEvhj5Zxs358e4xpnDtc58SHPp 4wM+mPZayzfv9+C/2q1nN3sq7i+P7pTGubkuRiscqf3G/M3/OT+t23OIt4emc9mX dIDniyp7I2dXw5h925LH5dXtBwaizGK1gCYx58ezpE9/wVfPtmOEgQuZWBvgijSH 8BYML7n9KZ78ZHIa7jDb453oEcBsV0eD5tkxeUXP5gO2V9djKXBZzwMZ8JX45GeZ VhxfppMs7R9vWoKdawTcD6F+Rv64SzrDB+z/gdTwYFWM0y/PFfYACMTBtEVRdUnk WITtVSJe7j9OK4WojkrCV4BAr2k1wY+kkt0mpnmlSPu5tEMtKxKh3zclDXN0F2u9 Yk+mH9qHt5vBUswdypwN4Vrty9/0ezFVEWQA+6TJfbV2nEQfhyMpw8SIPMz4k7U5 m3IVTfNx8nNnF2mcLVtGP3jZzg7Tu6uBaff8VeYTSy0ys1sLewu06Hr/khA9GmiI eZmLsZY8GGA= =Pgbq -----END PGP SIGNATURE----- Sun Nov 24 11:14:07 UTC 2024 I: Checking whether the package is not for us Sun Nov 24 11:14:07 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sun Nov 24 11:14:07 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sun Nov 24 11:14:07 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Sun Nov 24 11:14:07 UTC 2024 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-JjRrDb' ==================================================================================== Sun Nov 24 11:14:08 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "1 lastz unstable /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ 1.04.22-2" as arguments. Sun Nov 24 11:14:08 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-PFo5XgBK" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Nov 24 11:14:08 UTC 2024 I: Downloading source for unstable/lastz=1.04.22-2 Reading package lists... NOTICE: 'lastz' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lastz.git Please use: git clone https://salsa.debian.org/med-team/lastz.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5379 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (dsc) [2025 B] Get:2 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (tar) [5368 kB] Get:3 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (diff) [9220 B] Fetched 5379 kB in 0s (34.2 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'lastz' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lastz.git Please use: git clone https://salsa.debian.org/med-team/lastz.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5379 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (dsc) [2025 B] Get:2 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (tar) [5368 kB] Get:3 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (diff) [9220 B] Fetched 5379 kB in 0s (34.2 MB/s) Download complete and in download only mode ============================================================================= Building lastz in unstable on amd64 on ionos11-amd64 now. Date: Sun Nov 24 11:14:09 UTC 2024 Date UTC: Sun Nov 24 11:14:09 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 23:14:09 -12 2024 I: pbuilder-time-stamp: 1732446849 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [lastz_1.04.22-2.dsc] I: copying [./lastz_1.04.22.orig.tar.gz] I: copying [./lastz_1.04.22-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Nov 18 11:28:32 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lastz_1.04.22-2.dsc: no acceptable signature found dpkg-source: info: extracting lastz in lastz-1.04.22 dpkg-source: info: unpacking lastz_1.04.22.orig.tar.gz dpkg-source: info: unpacking lastz_1.04.22-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying propagate_cflags.patch dpkg-source: info: applying fix_signed_char.patch dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3769348/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='95e7c0f58da14e0b8098362850a6985a' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3769348' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_TmrX --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1 --logfile b1/build.log lastz_1.04.22-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3769348/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 28.2 MB of archives. After unpacking 111 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Fetched 28.2 MB in 4s (7326 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20286 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package sensible-utils. 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Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Nov 24 11:15:32 UTC 2024. Universal Time is now: Sun Nov 24 11:15:32 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3 (3.12.7-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/lastz-1.04.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lastz_1.04.22-2_source.changes dpkg-buildpackage: info: source package lastz dpkg-buildpackage: info: source version 1.04.22-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 dh_auto_clean make -j20 clean make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make clean make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f *.o rm -f lastz rm -f ../test_results/base_test*.* rm -f lastz_D rm -f lastz_32 make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j20 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make lastz lastz_D make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lastz.c -o lastz.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' infer_scores.c -o infer_scores.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seeds.c -o seeds.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' pos_table.c -o pos_table.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' quantum.c -o quantum.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seed_search.c -o seed_search.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' diag_hash.c -o diag_hash.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' chain.c -o chain.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gapped_extend.c -o gapped_extend.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' tweener.c -o tweener.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' masking.c -o masking.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' segment.c -o segment.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' edit_script.c -o edit_script.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' identity_dist.c -o identity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' coverage_dist.c -o coverage_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' continuity_dist.c -o continuity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' output.c -o output.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gfa.c -o gfa.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lav.c -o lav.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' axt.c -o axt.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' maf.c -o maf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' cigar.c -o cigar.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sam.c -o sam.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' genpaf.c -o genpaf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' text_align.c -o text_align.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' align_diffs.c -o align_diffs.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' utilities.c -o utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' dna_utilities.c -o dna_utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sequences.c -o sequences.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' capsule.c -o capsule.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lastz.c -o lastz_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' infer_scores.c -o infer_scores_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seeds.c -o seeds_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' pos_table.c -o pos_table_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' quantum.c -o quantum_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seed_search.c -o seed_search_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' diag_hash.c -o diag_hash_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' chain.c -o chain_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gapped_extend.c -o gapped_extend_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' tweener.c -o tweener_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' masking.c -o masking_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' segment.c -o segment_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' edit_script.c -o edit_script_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' identity_dist.c -o identity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' coverage_dist.c -o coverage_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' continuity_dist.c -o continuity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' output.c -o output_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gfa.c -o gfa_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lav.c -o lav_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' axt.c -o axt_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' maf.c -o maf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' cigar.c -o cigar_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sam.c -o sam_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' genpaf.c -o genpaf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' text_align.c -o text_align_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' align_diffs.c -o align_diffs_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' utilities.c -o utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' dna_utilities.c -o dna_utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sequences.c -o sequences_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' capsule.c -o capsule_D.o gcc lastz.o infer_scores.o seeds.o pos_table.o quantum.o seed_search.o diag_hash.o chain.o gapped_extend.o tweener.o masking.o segment.o edit_script.o identity_dist.o coverage_dist.o continuity_dist.o output.o gfa.o lav.o axt.o maf.o cigar.o sam.o genpaf.o text_align.o align_diffs.o utilities.o dna_utilities.o sequences.o capsule.o -lm -o lastz -Wl,-z,relro -Wl,-z,now gcc lastz_D.o infer_scores_D.o seeds_D.o pos_table_D.o quantum_D.o seed_search_D.o diag_hash_D.o chain_D.o gapped_extend_D.o tweener_D.o masking_D.o segment_D.o edit_script_D.o identity_dist_D.o coverage_dist_D.o continuity_dist_D.o output_D.o gfa_D.o lav_D.o axt_D.o maf_D.o cigar_D.o sam_D.o genpaf_D.o text_align_D.o align_diffs_D.o utilities_D.o dna_utilities_D.o sequences_D.o capsule_D.o -lm -o lastz_D -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make base_tests make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make base_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' SUCCESS: ../test_data/base_test.hits.lav and ../test_results/base_test.hits.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.hsp.lav are equivalent SUCCESS: ../test_data/base_test.adaptive_k.gfa and ../test_results/base_test.adaptive_k.gfa are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.default.lav are equivalent SUCCESS: ../test_data/base_test.default.axt and ../test_results/base_test.default.axt are equivalent SUCCESS: ../test_data/base_test.chained.lav and ../test_results/base_test.chained.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.extended.lav are equivalent SUCCESS: ../test_data/base_test.interpolated.lav and ../test_results/base_test.interpolated.lav are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.segments.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.stdin2.lav are equivalent SUCCESS: ../test_data/base_test.pig_cat.lav and ../test_results/base_test.2bit1.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.2bit2.lav are equivalent SUCCESS: ../test_data/base_test.float.lav and ../test_results/base_test.float.lav are equivalent SUCCESS: ../test_data/base_test.seeded.lav and ../test_results/base_test.seeded.lav are equivalent SUCCESS: ../test_data/base_test.hwseeded.lav and ../test_results/base_test.hwseeded.lav are equivalent SUCCESS: ../test_data/base_test.owseeded.gfa and ../test_results/base_test.owseeded.gfa are equivalent SUCCESS: ../test_data/base_test.masking.lav and ../test_results/base_test.masking.lav are equivalent SUCCESS: ../test_data/base_test.subrange.lav and ../test_results/base_test.subrange.lav are equivalent SUCCESS: ../test_data/base_test.mask.lav and ../test_results/base_test.mask.lav are equivalent make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make test make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make clean_test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make clean_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f ../test_results/base_test*.* make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j20 install DESTDIR=/build/reproducible-path/lastz-1.04.22/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make install make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' install --strip-program=true -d /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz_D /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package lastz-examples: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'lastz' in '../lastz_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-dbgsym' in '../lastz-dbgsym_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-examples' in '../lastz-examples_1.04.22-2_all.deb'. dpkg-genbuildinfo --build=binary -O../lastz_1.04.22-2_amd64.buildinfo dpkg-genchanges --build=binary -O../lastz_1.04.22-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3769348 and its subdirectories I: Current time: Sat Nov 23 23:16:48 -12 2024 I: pbuilder-time-stamp: 1732447008 Sun Nov 24 11:16:48 UTC 2024 I: Signing ./b1/lastz_1.04.22-2_amd64.buildinfo as lastz_1.04.22-2_amd64.buildinfo.asc Sun Nov 24 11:16:48 UTC 2024 I: Signed ./b1/lastz_1.04.22-2_amd64.buildinfo as ./b1/lastz_1.04.22-2_amd64.buildinfo.asc Sun Nov 24 11:16:48 UTC 2024 - build #1 for lastz/unstable/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Sun Nov 24 11:16:48 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-PFo5XgBK, removing. /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:16 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:14 b2 -rw-r--r-- 1 jenkins jenkins 2025 Nov 18 2022 lastz_1.04.22-2.dsc -rw------- 1 jenkins jenkins 3123 Nov 24 11:14 rbuildlog.vFqRGkk /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1: total 6012 -rw-r--r-- 1 jenkins jenkins 68029 Nov 24 11:16 build.log -rw-r--r-- 1 jenkins jenkins 1144964 Nov 24 11:16 lastz-dbgsym_1.04.22-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 4371804 Nov 24 11:16 lastz-examples_1.04.22-2_all.deb -rw-r--r-- 1 jenkins jenkins 9220 Nov 24 11:16 lastz_1.04.22-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2025 Nov 24 11:16 lastz_1.04.22-2.dsc -rw-r--r-- 1 jenkins jenkins 6347 Nov 24 11:16 lastz_1.04.22-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7229 Nov 24 11:16 lastz_1.04.22-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1662 Nov 24 11:16 lastz_1.04.22-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 523500 Nov 24 11:16 lastz_1.04.22-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1158 Nov 24 11:16 lastz_1.04.22-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2: total 0 Sun Nov 24 11:16:49 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 23:14:09 -12 2024 I: pbuilder-time-stamp: 1732446849 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [lastz_1.04.22-2.dsc] I: copying [./lastz_1.04.22.orig.tar.gz] I: copying [./lastz_1.04.22-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Nov 18 11:28:32 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lastz_1.04.22-2.dsc: no acceptable signature found dpkg-source: info: extracting lastz in lastz-1.04.22 dpkg-source: info: unpacking lastz_1.04.22.orig.tar.gz dpkg-source: info: unpacking lastz_1.04.22-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying propagate_cflags.patch dpkg-source: info: applying fix_signed_char.patch dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3769348/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='95e7c0f58da14e0b8098362850a6985a' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3769348' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_TmrX --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1 --logfile b1/build.log lastz_1.04.22-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3769348/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 28.2 MB of archives. After unpacking 111 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Fetched 28.2 MB in 4s (7326 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20286 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package sensible-utils. 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Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3 (3.12.7-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/lastz-1.04.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lastz_1.04.22-2_source.changes dpkg-buildpackage: info: source package lastz dpkg-buildpackage: info: source version 1.04.22-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 dh_auto_clean make -j20 clean make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make clean make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f *.o rm -f lastz rm -f ../test_results/base_test*.* rm -f lastz_D rm -f lastz_32 make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j20 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make lastz lastz_D make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lastz.c -o lastz.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' infer_scores.c -o infer_scores.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seeds.c -o seeds.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' pos_table.c -o pos_table.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' quantum.c -o quantum.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seed_search.c -o seed_search.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' diag_hash.c -o diag_hash.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' chain.c -o chain.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gapped_extend.c -o gapped_extend.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' tweener.c -o tweener.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' masking.c -o masking.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' segment.c -o segment.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' edit_script.c -o edit_script.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' identity_dist.c -o identity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' coverage_dist.c -o coverage_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' continuity_dist.c -o continuity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' output.c -o output.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gfa.c -o gfa.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lav.c -o lav.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' axt.c -o axt.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' maf.c -o maf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' cigar.c -o cigar.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sam.c -o sam.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' genpaf.c -o genpaf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' text_align.c -o text_align.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' align_diffs.c -o align_diffs.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' utilities.c -o utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' dna_utilities.c -o dna_utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sequences.c -o sequences.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' capsule.c -o capsule.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lastz.c -o lastz_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' infer_scores.c -o infer_scores_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seeds.c -o seeds_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' pos_table.c -o pos_table_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' quantum.c -o quantum_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seed_search.c -o seed_search_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' diag_hash.c -o diag_hash_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' chain.c -o chain_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gapped_extend.c -o gapped_extend_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' tweener.c -o tweener_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' masking.c -o masking_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' segment.c -o segment_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' edit_script.c -o edit_script_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' identity_dist.c -o identity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' coverage_dist.c -o coverage_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' continuity_dist.c -o continuity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' output.c -o output_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gfa.c -o gfa_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lav.c -o lav_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' axt.c -o axt_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' maf.c -o maf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' cigar.c -o cigar_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sam.c -o sam_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' genpaf.c -o genpaf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' text_align.c -o text_align_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' align_diffs.c -o align_diffs_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' utilities.c -o utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' dna_utilities.c -o dna_utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sequences.c -o sequences_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' capsule.c -o capsule_D.o gcc lastz.o infer_scores.o seeds.o pos_table.o quantum.o seed_search.o diag_hash.o chain.o gapped_extend.o tweener.o masking.o segment.o edit_script.o identity_dist.o coverage_dist.o continuity_dist.o output.o gfa.o lav.o axt.o maf.o cigar.o sam.o genpaf.o text_align.o align_diffs.o utilities.o dna_utilities.o sequences.o capsule.o -lm -o lastz -Wl,-z,relro -Wl,-z,now gcc lastz_D.o infer_scores_D.o seeds_D.o pos_table_D.o quantum_D.o seed_search_D.o diag_hash_D.o chain_D.o gapped_extend_D.o tweener_D.o masking_D.o segment_D.o edit_script_D.o identity_dist_D.o coverage_dist_D.o continuity_dist_D.o output_D.o gfa_D.o lav_D.o axt_D.o maf_D.o cigar_D.o sam_D.o genpaf_D.o text_align_D.o align_diffs_D.o utilities_D.o dna_utilities_D.o sequences_D.o capsule_D.o -lm -o lastz_D -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make base_tests make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make base_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' SUCCESS: ../test_data/base_test.hits.lav and ../test_results/base_test.hits.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.hsp.lav are equivalent SUCCESS: ../test_data/base_test.adaptive_k.gfa and ../test_results/base_test.adaptive_k.gfa are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.default.lav are equivalent SUCCESS: ../test_data/base_test.default.axt and ../test_results/base_test.default.axt are equivalent SUCCESS: ../test_data/base_test.chained.lav and ../test_results/base_test.chained.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.extended.lav are equivalent SUCCESS: ../test_data/base_test.interpolated.lav and ../test_results/base_test.interpolated.lav are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.segments.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.stdin2.lav are equivalent SUCCESS: ../test_data/base_test.pig_cat.lav and ../test_results/base_test.2bit1.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.2bit2.lav are equivalent SUCCESS: ../test_data/base_test.float.lav and ../test_results/base_test.float.lav are equivalent SUCCESS: ../test_data/base_test.seeded.lav and ../test_results/base_test.seeded.lav are equivalent SUCCESS: ../test_data/base_test.hwseeded.lav and ../test_results/base_test.hwseeded.lav are equivalent SUCCESS: ../test_data/base_test.owseeded.gfa and ../test_results/base_test.owseeded.gfa are equivalent SUCCESS: ../test_data/base_test.masking.lav and ../test_results/base_test.masking.lav are equivalent SUCCESS: ../test_data/base_test.subrange.lav and ../test_results/base_test.subrange.lav are equivalent SUCCESS: ../test_data/base_test.mask.lav and ../test_results/base_test.mask.lav are equivalent make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make test make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make clean_test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make clean_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f ../test_results/base_test*.* make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j20 install DESTDIR=/build/reproducible-path/lastz-1.04.22/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make install make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' install --strip-program=true -d /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz_D /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package lastz-examples: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'lastz' in '../lastz_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-dbgsym' in '../lastz-dbgsym_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-examples' in '../lastz-examples_1.04.22-2_all.deb'. dpkg-genbuildinfo --build=binary -O../lastz_1.04.22-2_amd64.buildinfo dpkg-genchanges --build=binary -O../lastz_1.04.22-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3769348 and its subdirectories I: Current time: Sat Nov 23 23:16:48 -12 2024 I: pbuilder-time-stamp: 1732447008 Sun Nov 24 11:16:50 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Sun Nov 24 11:16:50 UTC 2024 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Sun Nov 24 11:16:50 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Sun Nov 24 11:16:50 UTC 2024 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-Y4qFMf' ==================================================================================== Sat Dec 27 17:39:48 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 lastz unstable /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ 1.04.22-2" as arguments. Sat Dec 27 17:39:48 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-egEQt4qH" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Dec 27 17:39:48 UTC 2025 I: Downloading source for unstable/lastz=1.04.22-2 Reading package lists... NOTICE: 'lastz' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lastz.git Please use: git clone https://salsa.debian.org/med-team/lastz.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5379 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (dsc) [2025 B] Get:2 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (tar) [5368 kB] Get:3 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (diff) [9220 B] Fetched 5379 kB in 0s (36.1 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'lastz' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lastz.git Please use: git clone https://salsa.debian.org/med-team/lastz.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5379 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (dsc) [2025 B] Get:2 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (tar) [5368 kB] Get:3 http://deb.debian.org/debian unstable/main lastz 1.04.22-2 (diff) [9220 B] Fetched 5379 kB in 0s (36.1 MB/s) Download complete and in download only mode ============================================================================= Re-Building lastz in unstable on amd64 on ionos15-amd64 now. Date: Sat Dec 27 17:39:49 UTC 2025 Date UTC: Sat Dec 27 17:39:49 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_mRED + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' lastz = debian-installer -o lastz = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' lastz = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_mRED --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2 --logfile b2/build.log lastz_1.04.22-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Dec 28 07:39:49 +14 2025 I: pbuilder-time-stamp: 1766857189 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [lastz_1.04.22-2.dsc] I: copying [./lastz_1.04.22.orig.tar.gz] I: copying [./lastz_1.04.22-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Nov 18 11:28:32 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lastz_1.04.22-2.dsc: no acceptable signature found dpkg-source: info: extracting lastz in lastz-1.04.22 dpkg-source: info: unpacking lastz_1.04.22.orig.tar.gz dpkg-source: info: unpacking lastz_1.04.22-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying propagate_cflags.patch dpkg-source: info: applying fix_signed_char.patch dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 27 17:40 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=2d993c5a034d494aa75c121855ca04af LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3616512 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_mRED --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2 --logfile b2/build.log lastz_1.04.22-2.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 28.2 MB of archives. After unpacking 111 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Fetched 28.2 MB in 0s (77.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20286 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../09-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... 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Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Dec 27 17:40:37 UTC 2025. Universal Time is now: Sat Dec 27 17:40:37 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3 (3.12.7-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/lastz-1.04.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lastz_1.04.22-2_source.changes dpkg-buildpackage: info: source package lastz dpkg-buildpackage: info: source version 1.04.22-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 dh_auto_clean make -j42 clean make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make clean make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f *.o rm -f lastz rm -f ../test_results/base_test*.* rm -f lastz_D rm -f lastz_32 make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j42 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make lastz lastz_D make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lastz.c -o lastz.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' infer_scores.c -o infer_scores.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seeds.c -o seeds.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' pos_table.c -o pos_table.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' quantum.c -o quantum.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seed_search.c -o seed_search.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' diag_hash.c -o diag_hash.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' chain.c -o chain.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gapped_extend.c -o gapped_extend.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' tweener.c -o tweener.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' masking.c -o masking.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' segment.c -o segment.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' edit_script.c -o edit_script.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' identity_dist.c -o identity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' coverage_dist.c -o coverage_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' continuity_dist.c -o continuity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' output.c -o output.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gfa.c -o gfa.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lav.c -o lav.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' axt.c -o axt.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' maf.c -o maf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' cigar.c -o cigar.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sam.c -o sam.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' genpaf.c -o genpaf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' text_align.c -o text_align.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' align_diffs.c -o align_diffs.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' utilities.c -o utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' dna_utilities.c -o dna_utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sequences.c -o sequences.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' capsule.c -o capsule.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lastz.c -o lastz_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' infer_scores.c -o infer_scores_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seeds.c -o seeds_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' pos_table.c -o pos_table_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' quantum.c -o quantum_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seed_search.c -o seed_search_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' diag_hash.c -o diag_hash_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' chain.c -o chain_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gapped_extend.c -o gapped_extend_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' tweener.c -o tweener_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' masking.c -o masking_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' segment.c -o segment_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' edit_script.c -o edit_script_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' identity_dist.c -o identity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' coverage_dist.c -o coverage_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' continuity_dist.c -o continuity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' output.c -o output_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gfa.c -o gfa_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lav.c -o lav_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' axt.c -o axt_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' maf.c -o maf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' cigar.c -o cigar_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sam.c -o sam_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' genpaf.c -o genpaf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' text_align.c -o text_align_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' align_diffs.c -o align_diffs_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' utilities.c -o utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' dna_utilities.c -o dna_utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sequences.c -o sequences_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' capsule.c -o capsule_D.o gcc lastz.o infer_scores.o seeds.o pos_table.o quantum.o seed_search.o diag_hash.o chain.o gapped_extend.o tweener.o masking.o segment.o edit_script.o identity_dist.o coverage_dist.o continuity_dist.o output.o gfa.o lav.o axt.o maf.o cigar.o sam.o genpaf.o text_align.o align_diffs.o utilities.o dna_utilities.o sequences.o capsule.o -lm -o lastz -Wl,-z,relro -Wl,-z,now gcc lastz_D.o infer_scores_D.o seeds_D.o pos_table_D.o quantum_D.o seed_search_D.o diag_hash_D.o chain_D.o gapped_extend_D.o tweener_D.o masking_D.o segment_D.o edit_script_D.o identity_dist_D.o coverage_dist_D.o continuity_dist_D.o output_D.o gfa_D.o lav_D.o axt_D.o maf_D.o cigar_D.o sam_D.o genpaf_D.o text_align_D.o align_diffs_D.o utilities_D.o dna_utilities_D.o sequences_D.o capsule_D.o -lm -o lastz_D -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make base_tests make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make base_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' SUCCESS: ../test_data/base_test.hits.lav and ../test_results/base_test.hits.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.hsp.lav are equivalent SUCCESS: ../test_data/base_test.adaptive_k.gfa and ../test_results/base_test.adaptive_k.gfa are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.default.lav are equivalent SUCCESS: ../test_data/base_test.default.axt and ../test_results/base_test.default.axt are equivalent SUCCESS: ../test_data/base_test.chained.lav and ../test_results/base_test.chained.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.extended.lav are equivalent SUCCESS: ../test_data/base_test.interpolated.lav and ../test_results/base_test.interpolated.lav are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.segments.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.stdin2.lav are equivalent SUCCESS: ../test_data/base_test.pig_cat.lav and ../test_results/base_test.2bit1.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.2bit2.lav are equivalent SUCCESS: ../test_data/base_test.float.lav and ../test_results/base_test.float.lav are equivalent SUCCESS: ../test_data/base_test.seeded.lav and ../test_results/base_test.seeded.lav are equivalent SUCCESS: ../test_data/base_test.hwseeded.lav and ../test_results/base_test.hwseeded.lav are equivalent SUCCESS: ../test_data/base_test.owseeded.gfa and ../test_results/base_test.owseeded.gfa are equivalent SUCCESS: ../test_data/base_test.masking.lav and ../test_results/base_test.masking.lav are equivalent SUCCESS: ../test_data/base_test.subrange.lav and ../test_results/base_test.subrange.lav are equivalent SUCCESS: ../test_data/base_test.mask.lav and ../test_results/base_test.mask.lav are equivalent make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make test make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make clean_test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make clean_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f ../test_results/base_test*.* make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j42 install DESTDIR=/build/reproducible-path/lastz-1.04.22/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make install make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' install --strip-program=true -d /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz_D /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package lastz-examples: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'lastz' in '../lastz_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-dbgsym' in '../lastz-dbgsym_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-examples' in '../lastz-examples_1.04.22-2_all.deb'. dpkg-genbuildinfo --build=binary -O../lastz_1.04.22-2_amd64.buildinfo dpkg-genchanges --build=binary -O../lastz_1.04.22-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3616512 and its subdirectories I: Current time: Sun Dec 28 07:41:02 +14 2025 I: pbuilder-time-stamp: 1766857262 + false + set +x Sat Dec 27 17:41:02 UTC 2025 I: Signing ./b2/lastz_1.04.22-2_amd64.buildinfo as lastz_1.04.22-2_amd64.buildinfo.asc Sat Dec 27 17:41:02 UTC 2025 I: Signed ./b2/lastz_1.04.22-2_amd64.buildinfo as ./b2/lastz_1.04.22-2_amd64.buildinfo.asc Sat Dec 27 17:41:02 UTC 2025 - build #2 for lastz/unstable/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Sat Dec 27 17:41:02 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-egEQt4qH, removing. /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ: total 88 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:16 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 11:18 b2 -rw-r--r-- 1 jenkins jenkins 2025 Nov 18 2022 lastz_1.04.22-2.dsc -rw------- 1 jenkins jenkins 71441 Nov 24 11:16 rbuildlog.vFqRGkk /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1: total 6036 -rw-r--r-- 1 jenkins jenkins 68029 Nov 24 11:16 build.log -rw-r--r-- 1 jenkins jenkins 1144964 Nov 24 11:16 lastz-dbgsym_1.04.22-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 4371804 Nov 24 11:16 lastz-examples_1.04.22-2_all.deb -rw-r--r-- 1 jenkins jenkins 9220 Nov 24 11:16 lastz_1.04.22-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2025 Nov 24 11:16 lastz_1.04.22-2.dsc -rw-r--r-- 1 jenkins jenkins 6347 Nov 24 11:16 lastz_1.04.22-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7229 Nov 24 11:16 lastz_1.04.22-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1662 Nov 24 11:16 lastz_1.04.22-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 523500 Nov 24 11:16 lastz_1.04.22-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1158 Nov 24 11:16 lastz_1.04.22-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2: total 6016 -rw-r--r-- 1 jenkins jenkins 69972 Nov 24 11:18 build.log -rw-r--r-- 1 jenkins jenkins 1144964 Nov 24 11:18 lastz-dbgsym_1.04.22-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 4371804 Nov 24 11:18 lastz-examples_1.04.22-2_all.deb -rw-r--r-- 1 jenkins jenkins 9220 Nov 24 11:18 lastz_1.04.22-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2025 Nov 24 11:18 lastz_1.04.22-2.dsc -rw-r--r-- 1 jenkins jenkins 6356 Nov 24 11:18 lastz_1.04.22-2_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 7238 Nov 24 11:18 lastz_1.04.22-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1662 Nov 24 11:18 lastz_1.04.22-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 523500 Nov 24 11:18 lastz_1.04.22-2_amd64.deb -rw-r--r-- 1 jenkins jenkins 1158 Nov 24 11:18 lastz_1.04.22-2_source.changes Sun Nov 24 11:18:05 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Sun Nov 24 11:18:06 UTC 2024 I: lastz_1.04.22-2_amd64.changes: Format: 1.8 Date: Fri, 18 Nov 2022 12:25:49 +0100 Source: lastz Binary: lastz lastz-dbgsym lastz-examples Architecture: amd64 all Version: 1.04.22-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: lastz - pairwise aligning DNA sequences lastz-examples - pairwise aligning DNA sequences (examples and test scripts) Changes: lastz (1.04.22-2) unstable; urgency=medium . * Fix watch file Checksums-Sha1: cbc016e15a89b58b705492f8433fe29cb2a07696 1144964 lastz-dbgsym_1.04.22-2_amd64.deb 9a658720a0b8f5cdbecf4e1699d21ae5f483ded9 4371804 lastz-examples_1.04.22-2_all.deb f32e396825006b4cc7c6629cfedf984333efe917 6347 lastz_1.04.22-2_amd64.buildinfo bdcd0530bfdf7f5b98af3f0219e5f0d4c960aa99 523500 lastz_1.04.22-2_amd64.deb Checksums-Sha256: 76cd8ac1c414619ebed468f27d1bd9de5b6a489da382b345925e92a2fe8acb9a 1144964 lastz-dbgsym_1.04.22-2_amd64.deb e7942e85bcd0e4ed9d0f78c3e5f8b19ef20e9081f6708049baa4086e32b5c06b 4371804 lastz-examples_1.04.22-2_all.deb b9a5825b02a3ca02b3c1106828505301155812e2fdba78e3851bf81419ae9ee1 6347 lastz_1.04.22-2_amd64.buildinfo 356e5dd40f167a67c26edba514896d04f10dde2458a94dcd2bc69235d3c7f75f 523500 lastz_1.04.22-2_amd64.deb Files: f484809cd99d7d5340a436bae174a04b 1144964 debug optional lastz-dbgsym_1.04.22-2_amd64.deb 48688a6bc13fc87c97c1eb5ae9821a55 4371804 science optional lastz-examples_1.04.22-2_all.deb 65a586e2923cc2bc80838d28d8603ae6 6347 science optional lastz_1.04.22-2_amd64.buildinfo 1db7f7034a3fe07e42ad8d41b0cc2a1d 523500 science optional lastz_1.04.22-2_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/lastz_1.04.22-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/lastz_1.04.22-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/lastz_1.04.22-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/lastz_1.04.22-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/amd64/lastz_1.04.22-2_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/lastz_1.04.22-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-24 11:16:49.499955572 +0000 +++ b2/build.log 2024-11-24 11:18:05.420520431 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Nov 23 23:14:09 -12 2024 -I: pbuilder-time-stamp: 1732446849 +I: Current time: Sun Dec 28 07:39:49 +14 2025 +I: pbuilder-time-stamp: 1766857189 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -30,52 +30,84 @@ dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3769348/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 27 17:40 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='95e7c0f58da14e0b8098362850a6985a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3769348' - PS1='# ' - PS2='> ' + INVOCATION_ID=2d993c5a034d494aa75c121855ca04af + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3616512 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_TmrX --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1 --logfile b1/build.log lastz_1.04.22-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/pbuilderrc_mRED --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2 --logfile b2/build.log lastz_1.04.22-2.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3769348/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -178,7 +210,7 @@ Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] -Fetched 28.2 MB in 4s (7326 kB/s) +Fetched 28.2 MB in 0s (77.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) @@ -401,8 +433,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Nov 24 11:15:32 UTC 2024. -Universal Time is now: Sun Nov 24 11:15:32 UTC 2024. +Local time is now: Sat Dec 27 17:40:37 UTC 2025. +Universal Time is now: Sat Dec 27 17:40:37 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -459,7 +491,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/lastz-1.04.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lastz_1.04.22-2_source.changes +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/lastz-1.04.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lastz_1.04.22-2_source.changes dpkg-buildpackage: info: source package lastz dpkg-buildpackage: info: source version 1.04.22-2 dpkg-buildpackage: info: source distribution unstable @@ -469,7 +505,7 @@ debian/rules clean dh clean --with python3 dh_auto_clean - make -j20 clean + make -j42 clean make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make clean make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' @@ -487,7 +523,7 @@ dh_autoreconf dh_auto_configure dh_auto_build - make -j20 "INSTALL=install --strip-program=true" + make -j42 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make lastz lastz_D make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' @@ -599,7 +635,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - make -j20 install DESTDIR=/build/reproducible-path/lastz-1.04.22/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + make -j42 install DESTDIR=/build/reproducible-path/lastz-1.04.22/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make install make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' @@ -641,12 +677,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3616512/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3769348 and its subdirectories -I: Current time: Sat Nov 23 23:16:48 -12 2024 -I: pbuilder-time-stamp: 1732447008 +I: removing directory /srv/workspace/pbuilder/3616512 and its subdirectories +I: Current time: Sun Dec 28 07:41:02 +14 2025 +I: pbuilder-time-stamp: 1766857262 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/lastz_1.04.22-2.diff: 67.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/lastz_1.04.22-2.diff.gz b2/build.log: 86.8% -- replaced with stdout Compressing the 1st log... b1/build.log: 87.5% -- replaced with stdout Sun Nov 24 11:18:07 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_lastz_unstable_amd64_1732447087 + touch /var/log/reproducible-builds/diffoscope_stamp_lastz_unstable_amd64_1732447087 + RESULT=0 + systemd-run '--description=diffoscope on lastz/1.04.22-2 in unstable/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_27-39916 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ --run-session -c jenkins-reproducible-unstable-diffoscope-b84ea3e8-49dd-4a7a-b818-05aa126a175d -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/dbd-tmp-aPPd2Jg ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/lastz_1.04.22-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/lastz_1.04.22-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/lastz_1.04.22-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1/lastz_1.04.22-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2/lastz_1.04.22-2_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_27-39916.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/lastz_1.04.22-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/lastz_1.04.22-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/lastz_1.04.22-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b1/lastz_1.04.22-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.BSOSuSpZ/b2/lastz_1.04.22-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.464s) 0.464s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.076s) 0.076s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 865ms CPU time consumed: 864ms _ _ | | __ _ ___| |_ ____ | |/ _` / __| __|_ / | | (_| \__ \ |_ / / |_|\__,_|___/\__/___| Sun Nov 24 11:18:09 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Sun Nov 24 11:18:09 UTC 2024 I: lastz from unstable built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-24 11:18:09] INFO: Starting at 2024-11-24 11:18:09.761027 [2024-11-24 11:18:09] INFO: Generating the pages of 1 package(s) [2024-11-24 11:18:09] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/lastz didn't produce a buildlog, even though it has been built. [2024-11-24 11:18:10] INFO: Finished at 2024-11-24 11:18:10.109797, took: 0:00:00.348778 Sun Nov 24 11:18:10 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/lastz.html Sun Nov 24 11:18:10 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Nov 24 11:18:10 UTC 2024 I: Submitting 8.0K b1/lastz_1.04.22-2_amd64.buildinfo.asc https://buildinfo.debian.net/f32e396825006b4cc7c6629cfedf984333efe917/lastz_1.04.22-2_all Sun Nov 24 11:18:11 UTC 2024 I: Submitting 8.0K b2/lastz_1.04.22-2_amd64.buildinfo.asc https://buildinfo.debian.net/d0158ff6315e6fc9cbd22a58ac11b17ef0d3d960/lastz_1.04.22-2_all Sun Nov 24 11:18:11 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Nov 24 11:18:11 UTC 2024 I: Done submitting .buildinfo files. Sun Nov 24 11:18:11 UTC 2024 I: Removing signed lastz_1.04.22-2_amd64.buildinfo.asc files: removed './b1/lastz_1.04.22-2_amd64.buildinfo.asc' removed './b2/lastz_1.04.22-2_amd64.buildinfo.asc' 1732447091 amd64 unstable lastz Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/lastz_1.04.22-2.rbuild.log: 84.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/lastz_1.04.22-2.rbuild.log.gz [2024-11-24 11:18:12] INFO: Starting at 2024-11-24 11:18:12.175942 [2024-11-24 11:18:12] INFO: Generating the pages of 1 package(s) [2024-11-24 11:18:12] INFO: Finished at 2024-11-24 11:18:12.607419, took: 0:00:00.431489 All cleanup done. Sun Nov 24 11:18:12 UTC 2024 - total duration: 0h 4m 25s. Sun Nov 24 11:18:12 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-msUJZMgT, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 4min 28.486s CPU time consumed: 8.023s