Running as unit: rb-build-amd64_27-71121.service ==================================================================================== Tue Sep 16 08:14:34 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_27) on jenkins, called using "ionos11-amd64 ionos15-amd64" as arguments. Tue Sep 16 08:14:34 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-C5dDZA0i" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Sep 16 08:14:35 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Tue Sep 16 08:14:35 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-TUuY3E' Tue Sep 16 08:14:35 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Tue Sep 16 08:14:35 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-CbNg9T' ok, let's check if python-cgecore is building anywhere yet… ok, python-cgecore is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of python-cgecore in unstable on amd64 on jenkins now. 1st build will be done on ionos11-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Tue Sep 16 08:14:46 UTC 2025 I: starting to build python-cgecore/unstable/amd64 on jenkins on '2025-09-16 08:14' Tue Sep 16 08:14:46 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_27/71121/console.log 1758010486 amd64 unstable python-cgecore Tue Sep 16 08:14:46 UTC 2025 I: Downloading source for unstable/python-cgecore=1.5.6+ds-2 --2025-09-16 08:14:46-- http://deb.debian.org/debian/pool/main/p/python-cgecore/python-cgecore_1.5.6%2bds-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2148 (2.1K) [text/prs.lines.tag] Saving to: ‘python-cgecore_1.5.6+ds-2.dsc’ 0K .. 100% 108M=0s 2025-09-16 08:14:47 (108 MB/s) - ‘python-cgecore_1.5.6+ds-2.dsc’ saved [2148/2148] --2025-09-16 08:14:46-- http://deb.debian.org/debian/pool/main/p/python-cgecore/python-cgecore_1.5.6%2bds-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2148 (2.1K) [text/prs.lines.tag] Saving to: ‘python-cgecore_1.5.6+ds-2.dsc’ 0K .. 100% 108M=0s 2025-09-16 08:14:47 (108 MB/s) - ‘python-cgecore_1.5.6+ds-2.dsc’ saved [2148/2148] Tue Sep 16 08:14:47 UTC 2025 I: python-cgecore_1.5.6+ds-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-cgecore Binary: python3-cgecore Architecture: all Version: 1.5.6+ds-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://bitbucket.org/genomicepidemiology/cge_core_module/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/python-cgecore Vcs-Git: https://salsa.debian.org/med-team/python-cgecore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-biopython Package-List: python3-cgecore deb python optional arch=all Checksums-Sha1: 468c6d2be57dfd1935f28426b4b37d039f8e3fb1 26276 python-cgecore_1.5.6+ds.orig.tar.xz b82660b593cabd52eda5aab055c15d46d9b8c409 2824 python-cgecore_1.5.6+ds-2.debian.tar.xz Checksums-Sha256: c8314e290afb2dea6789fa3baea08d26166c967ec0f49c402eae9b1bf9e79ad2 26276 python-cgecore_1.5.6+ds.orig.tar.xz 5930364ed1c3c6210f1ad93ed6ebe80b21d29fe6f55c14896948bb6c3a504eeb 2824 python-cgecore_1.5.6+ds-2.debian.tar.xz Files: baed19076f0ec4a42eb2d68800d4128f 26276 python-cgecore_1.5.6+ds.orig.tar.xz 8b5b7eacb24c932d4ebbda1ff0cdb593 2824 python-cgecore_1.5.6+ds-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmc8/nMRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBovVw/8CjoCNziCnjq8PnEQ90kmLjrQHC2BoJI4 YrtFXbzt5SU3LkmMhCbD5WvaMhohLbxlp0B+BN+17hefDLPxn/zT9fSjAZCcDdFw T5/l1Pfioa6BQM4AE8E7u/5ijLNUt4VEdTKkp2dreIu/va9wzZKXAWp7qSzEEF5f nS5M8JvCDABd1vTJJxOwk3w1X7twgYvV2jlrkGrDymkkbZ1BBxRYH4V4uYNGISjF HaiUtPj9qD6daPp3dRyAF/4McDTgGy0kCBqNTGh53z22SN3fgESvlrsLxxltlACL O0n+/pF1zMb3nLgB4G4KL4L6qtF+oZIk2L3yUYAO1jI04fCqKxyVXBShCLd3mc+9 yiYRmbAjHep6z4HoHTD/zVysuGN78k7XhXjww379/k00YBRT8a7widrvaPzTjLzF S7Lfi/g5hQSYb4K5gLnVxedNYxFwySiscqSyp6nTqN9K2Zgul5qZCS0dFx5HTLqn yu/YbBtwd0NRsM2CEQocceF4xzOBpbyJJj3I/JjAo6lZQ6oGPFvWi+vkYA8ILVGM 4HFEABv07j0WSTEELDRM/1LpNpVM8CojbCUexBSobho1qhHqEICoo7LsswPr2LkS wfTg+ME0FM3hdBHkfsmvyRo6D8jofxEsvqp+L/kBUuqyo2HMNe7cDsgwFBwyoIIe ga/1CdNnlFQ= =BXSl -----END PGP SIGNATURE----- Tue Sep 16 08:14:47 UTC 2025 I: Checking whether the package is not for us Tue Sep 16 08:14:47 UTC 2025 I: Starting 1st build on remote node ionos11-amd64.debian.net. Tue Sep 16 08:14:47 UTC 2025 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Tue Sep 16 08:14:47 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Tue Sep 16 08:14:47 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-xKUD0L' ==================================================================================== Tue Sep 16 08:14:47 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "1 python-cgecore unstable /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI 1.5.6+ds-2" as arguments. Tue Sep 16 08:14:47 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-sjqHJ0De" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Sep 16 08:14:47 UTC 2025 I: Downloading source for unstable/python-cgecore=1.5.6+ds-2 Reading package lists... NOTICE: 'python-cgecore' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-cgecore.git Please use: git clone https://salsa.debian.org/med-team/python-cgecore.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 31.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (dsc) [2148 B] Get:2 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (tar) [26.3 kB] Get:3 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (diff) [2824 B] Fetched 31.2 kB in 0s (340 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'python-cgecore' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-cgecore.git Please use: git clone https://salsa.debian.org/med-team/python-cgecore.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 31.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (dsc) [2148 B] Get:2 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (tar) [26.3 kB] Get:3 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (diff) [2824 B] Fetched 31.2 kB in 0s (340 kB/s) Download complete and in download only mode ============================================================================= Building python-cgecore in unstable on amd64 on ionos11-amd64 now. Date: Tue Sep 16 08:14:48 UTC 2025 Date UTC: Tue Sep 16 08:14:48 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Mon Sep 15 20:14:48 -12 2025 I: pbuilder-time-stamp: 1758010488 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-cgecore_1.5.6+ds-2.dsc] I: copying [./python-cgecore_1.5.6+ds.orig.tar.xz] I: copying [./python-cgecore_1.5.6+ds-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-cgecore_1.5.6+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting python-cgecore in python-cgecore-1.5.6+ds dpkg-source: info: unpacking python-cgecore_1.5.6+ds.orig.tar.xz dpkg-source: info: unpacking python-cgecore_1.5.6+ds-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python3.13.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/427264/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='8204c656907e48c79386dc7f89f7ce2b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='427264' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_OWps --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1 --logfile b1/build.log python-cgecore_1.5.6+ds-2.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/427264/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-biopython dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libblas3{a} libbrotli1{a} libcairo2{a} libdav1d7{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsvtav1enc2{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxrender1{a} libyuv0{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-biopython{a} python3-cairo{a} python3-charset-normalizer{a} python3-freetype{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-pil{a} python3-pkg-resources{a} python3-reportlab{a} python3-rlpycairo{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile shared-mime-info wget xdg-user-dirs 0 packages upgraded, 118 newly installed, 0 to remove and 0 not upgraded. Need to get 60.9 MB of archives. After unpacking 207 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1.2 [142 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-7 [215 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 15.2.0-4 [862 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-7 [2785 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.2.4+ds-1.2 [5224 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-5 [540 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 41 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.26 [939 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250414 [116 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.50-1 [282 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+25 [217 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 60 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.4 [318 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libabsl20240722 amd64 20240722.0-4 [492 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.12.1-1 [1871 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3+b1 [353 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-9+b2 [946 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1916.20250814-1 [172 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.3.0-1 [135 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.4 [401 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-2 [47.3 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.4-3 [1518 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-7 [76.3 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 11.4.5-1 [505 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 4.4.0-3 [251 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [204 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.3-1 [14.0 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.0-5 [364 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.3-1 [131 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 11.3.0-1 [526 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.27.0-2 [114 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-2 [89.4 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.4.3-1 [1168 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-biopython amd64 1.85+dfsg-5 [1674 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 60.9 MB in 15s (3955 kB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_amd64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:amd64 (3.13.7-1) ... Setting up libexpat1:amd64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20251 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_amd64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../4-libffi8_3.5.2-2_amd64.deb ... Unpacking libffi8:amd64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../6-libreadline8t64_8.3-3_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_amd64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21266 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.7-1_amd64.deb ... Unpacking python3 (3.13.7-1) ... Selecting previously unselected package python3-numpy-dev:amd64. 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Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../026-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../027-libelf1t64_0.193-3_amd64.deb ... Unpacking libelf1t64:amd64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../028-dwz_0.16-2_amd64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../029-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../030-libxml2-16_2.14.5+dfsg-0.2_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Selecting previously unselected package gettext. Preparing to unpack .../031-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../032-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../033-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../034-debhelper_13.26_all.deb ... Unpacking debhelper (13.26) ... Selecting previously unselected package dh-python. Preparing to unpack .../035-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../036-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../037-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:amd64. Preparing to unpack .../038-libfontenc1_1%3a1.1.8-1+b2_amd64.deb ... Unpacking libfontenc1:amd64 (1:1.1.8-1+b2) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../039-libbrotli1_1.1.0-2+b7_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../040-libpng16-16t64_1.6.50-1_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.50-1) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../041-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../042-x11-common_1%3a7.7+25_all.deb ... Unpacking x11-common (1:7.7+25) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../043-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... 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Current default time zone: 'Etc/UTC' Local time is now: Tue Sep 16 08:19:21 UTC 2025. Universal Time is now: Tue Sep 16 08:19:21 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:amd64 (3.12.1-7) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... Setting up libx11-data (2:1.8.12-1) ... Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libimagequant0:amd64 (4.4.0-3) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.50-1) ... Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1.2) ... Setting up autopoint (0.23.1-2) ... 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Setting up libavif16:amd64 (1.3.0-1) ... Setting up liblapack3:amd64 (3.12.1-7) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libxrender1:amd64 (1:0.9.12-1) ... Setting up libtool (2.5.4-5) ... Setting up fontconfig-config (2.15.0-2.4) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libglib2.0-0t64:amd64 (2.84.4-3) ... No schema files found: doing nothing. Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:amd64 (11.4.5-1) ... Setting up libfontconfig1:amd64 (2.15.0-2.4) ... Setting up libpython3.13-stdlib:amd64 (3.13.7-1) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-freetype (2.5.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.4-1+b1) ... Setting up libraqm0:amd64 (0.10.3-1) ... Setting up python3-typing-extensions (4.15.0-1) ... Setting up python3-numpy (1:2.2.4+ds-1.2) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-charset-normalizer (3.4.3-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up debhelper (13.26) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-pil:amd64 (11.3.0-1) ... Setting up python3-inflect (7.5.0-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-reportlab (4.4.3-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-5) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-cgecore-1.5.6+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-cgecore_1.5.6+ds-2_source.changes dpkg-buildpackage: info: source package python-cgecore dpkg-buildpackage: info: source version 1.5.6+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-cgecore-1.5.6+ds' dh_auto_clean I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf cgecore.egg-info make[1]: Leaving directory '/build/reproducible-path/python-cgecore-1.5.6+ds' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-cgecore/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/utility.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/cmdline.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/argumentparsing.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/blaster.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/argumentparsing.py to argumentparsing.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/blaster.py to blaster.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/run_blaster.py to run_blaster.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cmdline.py to cmdline.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/alignment.py to alignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/gramstain.py to gramstain.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/species.py to species.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cgefinder.py to cgefinder.cpython-313.pyc running install_egg_info running egg_info creating cgecore.egg-info writing cgecore.egg-info/PKG-INFO writing dependency_links to cgecore.egg-info/dependency_links.txt writing top-level names to cgecore.egg-info/top_level.txt writing manifest file 'cgecore.egg-info/SOURCES.txt' reading manifest file 'cgecore.egg-info/SOURCES.txt' writing manifest file 'cgecore.egg-info/SOURCES.txt' Copying cgecore.egg-info to /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore-1.5.6.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-cgecore' in '../python3-cgecore_1.5.6+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../python-cgecore_1.5.6+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../python-cgecore_1.5.6+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/427264 and its subdirectories I: Current time: Mon Sep 15 20:21:00 -12 2025 I: pbuilder-time-stamp: 1758010860 Tue Sep 16 08:21:00 UTC 2025 I: Signing ./b1/python-cgecore_1.5.6+ds-2_amd64.buildinfo as python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc Tue Sep 16 08:21:00 UTC 2025 I: Signed ./b1/python-cgecore_1.5.6+ds-2_amd64.buildinfo as ./b1/python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc Tue Sep 16 08:21:00 UTC 2025 - build #1 for python-cgecore/unstable/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Tue Sep 16 08:21:00 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-sjqHJ0De, removing. /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Sep 16 08:21 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 16 08:14 b2 -rw-rw-r-- 1 jenkins jenkins 2148 Nov 19 2024 python-cgecore_1.5.6+ds-2.dsc -rw------- 1 jenkins jenkins 3316 Sep 16 08:14 rbuildlog.u46RZLI /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1: total 128 -rw-r--r-- 1 jenkins jenkins 63020 Sep 16 08:21 build.log -rw-r--r-- 1 jenkins jenkins 2824 Sep 16 08:21 python-cgecore_1.5.6+ds-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2148 Sep 16 08:21 python-cgecore_1.5.6+ds-2.dsc -rw-r--r-- 1 jenkins jenkins 7288 Sep 16 08:21 python-cgecore_1.5.6+ds-2_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 8170 Sep 16 08:21 python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1300 Sep 16 08:21 python-cgecore_1.5.6+ds-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1467 Sep 16 08:21 python-cgecore_1.5.6+ds-2_source.changes -rw-r--r-- 1 jenkins jenkins 28792 Sep 16 08:21 python3-cgecore_1.5.6+ds-2_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2: total 0 Tue Sep 16 08:21:00 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Sep 15 20:14:48 -12 2025 I: pbuilder-time-stamp: 1758010488 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-cgecore_1.5.6+ds-2.dsc] I: copying [./python-cgecore_1.5.6+ds.orig.tar.xz] I: copying [./python-cgecore_1.5.6+ds-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-cgecore_1.5.6+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting python-cgecore in python-cgecore-1.5.6+ds dpkg-source: info: unpacking python-cgecore_1.5.6+ds.orig.tar.xz dpkg-source: info: unpacking python-cgecore_1.5.6+ds-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python3.13.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/427264/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='8204c656907e48c79386dc7f89f7ce2b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='427264' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_OWps --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1 --logfile b1/build.log python-cgecore_1.5.6+ds-2.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/427264/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-biopython dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libblas3{a} libbrotli1{a} libcairo2{a} libdav1d7{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsvtav1enc2{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxrender1{a} libyuv0{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-biopython{a} python3-cairo{a} python3-charset-normalizer{a} python3-freetype{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-pil{a} python3-pkg-resources{a} python3-reportlab{a} python3-rlpycairo{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile shared-mime-info wget xdg-user-dirs 0 packages upgraded, 118 newly installed, 0 to remove and 0 not upgraded. Need to get 60.9 MB of archives. After unpacking 207 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1.2 [142 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-7 [215 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 15.2.0-4 [862 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-7 [2785 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.2.4+ds-1.2 [5224 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-5 [540 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 41 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.26 [939 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250414 [116 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.50-1 [282 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+25 [217 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 60 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.4 [318 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libabsl20240722 amd64 20240722.0-4 [492 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.12.1-1 [1871 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3+b1 [353 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-9+b2 [946 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1916.20250814-1 [172 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.3.0-1 [135 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.4 [401 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-2 [47.3 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.4-3 [1518 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-7 [76.3 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 11.4.5-1 [505 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 4.4.0-3 [251 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [204 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.3-1 [14.0 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.0-5 [364 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.3-1 [131 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 11.3.0-1 [526 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.27.0-2 [114 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-2 [89.4 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.4.3-1 [1168 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-biopython amd64 1.85+dfsg-5 [1674 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 60.9 MB in 15s (3955 kB/s) Preconfiguring packages ... 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Setting up libxdmcp6:amd64 (1:1.1.5-1) ... Setting up libxcb1:amd64 (1.17.0-2+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-5) ... Setting up bsdextrautils (2.41.1-3) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libxcb-render0:amd64 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.26) ... Setting up libbrotli1:amd64 (1.1.0-2+b7) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up x11-common (1:7.7+25) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:amd64 (1.23-2) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up file (1:5.46-5) ... Setting up libabsl20240722:amd64 (20240722.0-4) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Sep 16 08:19:21 UTC 2025. Universal Time is now: Tue Sep 16 08:19:21 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:amd64 (3.12.1-7) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... Setting up libx11-data (2:1.8.12-1) ... Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libimagequant0:amd64 (4.4.0-3) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.50-1) ... Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1.2) ... Setting up autopoint (0.23.1-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libgav1-1:amd64 (0.19.0-3+b1) ... Setting up libgfortran5:amd64 (15.2.0-4) ... Setting up autoconf (2.72-3.1) ... Setting up libwebp7:amd64 (1.5.0-0.1) ... Setting up libffi8:amd64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up libdav1d7:amd64 (1.5.1-1) ... Setting up sensible-utils (0.0.26) ... Setting up libtiff6:amd64 (4.7.0-5) ... Setting up librav1e0.7:amd64 (0.7.1-9+b2) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up libopenjp2-7:amd64 (2.5.3-2.1) ... Setting up libx11-6:amd64 (2:1.8.12-1) ... Setting up netbase (6.5) ... Setting up sgml-base (1.31+nmu1) ... Setting up libwebpmux3:amd64 (1.5.0-0.1) ... Setting up libyuv0:amd64 (0.0.1916.20250814-1) ... Setting up readline-common (8.3-3) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up libavif16:amd64 (1.3.0-1) ... Setting up liblapack3:amd64 (3.12.1-7) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libxrender1:amd64 (1:0.9.12-1) ... Setting up libtool (2.5.4-5) ... Setting up fontconfig-config (2.15.0-2.4) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libglib2.0-0t64:amd64 (2.84.4-3) ... No schema files found: doing nothing. Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:amd64 (11.4.5-1) ... Setting up libfontconfig1:amd64 (2.15.0-2.4) ... Setting up libpython3.13-stdlib:amd64 (3.13.7-1) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-freetype (2.5.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.4-1+b1) ... Setting up libraqm0:amd64 (0.10.3-1) ... Setting up python3-typing-extensions (4.15.0-1) ... Setting up python3-numpy (1:2.2.4+ds-1.2) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-charset-normalizer (3.4.3-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up debhelper (13.26) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-pil:amd64 (11.3.0-1) ... Setting up python3-inflect (7.5.0-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-reportlab (4.4.3-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-5) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-cgecore-1.5.6+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-cgecore_1.5.6+ds-2_source.changes dpkg-buildpackage: info: source package python-cgecore dpkg-buildpackage: info: source version 1.5.6+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-cgecore-1.5.6+ds' dh_auto_clean I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf cgecore.egg-info make[1]: Leaving directory '/build/reproducible-path/python-cgecore-1.5.6+ds' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-cgecore/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/utility.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/cmdline.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/argumentparsing.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/blaster.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/argumentparsing.py to argumentparsing.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/blaster.py to blaster.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/run_blaster.py to run_blaster.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cmdline.py to cmdline.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/alignment.py to alignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/gramstain.py to gramstain.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/species.py to species.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cgefinder.py to cgefinder.cpython-313.pyc running install_egg_info running egg_info creating cgecore.egg-info writing cgecore.egg-info/PKG-INFO writing dependency_links to cgecore.egg-info/dependency_links.txt writing top-level names to cgecore.egg-info/top_level.txt writing manifest file 'cgecore.egg-info/SOURCES.txt' reading manifest file 'cgecore.egg-info/SOURCES.txt' writing manifest file 'cgecore.egg-info/SOURCES.txt' Copying cgecore.egg-info to /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore-1.5.6.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-cgecore' in '../python3-cgecore_1.5.6+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../python-cgecore_1.5.6+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../python-cgecore_1.5.6+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/427264 and its subdirectories I: Current time: Mon Sep 15 20:21:00 -12 2025 I: pbuilder-time-stamp: 1758010860 Tue Sep 16 08:21:00 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Tue Sep 16 08:21:00 UTC 2025 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Tue Sep 16 08:21:00 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Tue Sep 16 08:21:00 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-uUp8Z2' ==================================================================================== Mon Oct 19 14:44:00 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 python-cgecore unstable /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI 1.5.6+ds-2" as arguments. Mon Oct 19 14:44:00 UTC 2026 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-MtzVNKii" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Oct 19 14:44:00 UTC 2026 I: Downloading source for unstable/python-cgecore=1.5.6+ds-2 Reading package lists... NOTICE: 'python-cgecore' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-cgecore.git Please use: git clone https://salsa.debian.org/med-team/python-cgecore.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 31.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (dsc) [2148 B] Get:2 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (tar) [26.3 kB] Get:3 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (diff) [2824 B] Fetched 31.2 kB in 0s (445 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'python-cgecore' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-cgecore.git Please use: git clone https://salsa.debian.org/med-team/python-cgecore.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 31.2 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (dsc) [2148 B] Get:2 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (tar) [26.3 kB] Get:3 http://deb.debian.org/debian unstable/main python-cgecore 1.5.6+ds-2 (diff) [2824 B] Fetched 31.2 kB in 0s (445 kB/s) Download complete and in download only mode ============================================================================= Re-Building python-cgecore in unstable on amd64 on ionos15-amd64 now. Date: Mon Oct 19 14:44:00 UTC 2026 Date UTC: Mon Oct 19 14:44:00 UTC 2026 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_mqoU + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' python-cgecore = debian-installer -o python-cgecore = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' python-cgecore = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_mqoU --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2 --logfile b2/build.log python-cgecore_1.5.6+ds-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Tue Oct 20 04:44:01 +14 2026 I: pbuilder-time-stamp: 1792421041 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-cgecore_1.5.6+ds-2.dsc] I: copying [./python-cgecore_1.5.6+ds.orig.tar.xz] I: copying [./python-cgecore_1.5.6+ds-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-cgecore_1.5.6+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting python-cgecore in python-cgecore-1.5.6+ds dpkg-source: info: unpacking python-cgecore_1.5.6+ds.orig.tar.xz dpkg-source: info: unpacking python-cgecore_1.5.6+ds-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python3.13.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Oct 19 14:44 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=dd7a49fab3eb4fa4be2ae8870c858981 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=84622 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_mqoU --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2 --logfile b2/build.log python-cgecore_1.5.6+ds-2.dsc' SUDO_GID=111 SUDO_HOME=/var/lib/jenkins SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-biopython dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libblas3{a} libbrotli1{a} libcairo2{a} libdav1d7{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} liblapack3{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsvtav1enc2{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxrender1{a} libyuv0{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-biopython{a} python3-cairo{a} python3-charset-normalizer{a} python3-freetype{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-pil{a} python3-pkg-resources{a} python3-reportlab{a} python3-rlpycairo{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile shared-mime-info wget xdg-user-dirs 0 packages upgraded, 118 newly installed, 0 to remove and 0 not upgraded. Need to get 60.9 MB of archives. After unpacking 207 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.2.4+ds-1.2 [142 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-7 [215 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 15.2.0-4 [862 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-7 [2785 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.2.4+ds-1.2 [5224 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-5 [540 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 41 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.26 [939 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250414 [116 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.50-1 [282 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+25 [217 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 60 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.4 [318 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libabsl20240722 amd64 20240722.0-4 [492 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.12.1-1 [1871 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3+b1 [353 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-9+b2 [946 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1916.20250814-1 [172 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.3.0-1 [135 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.4 [401 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-2 [47.3 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.84.4-3 [1518 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-7 [76.3 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 11.4.5-1 [505 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 4.4.0-3 [251 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [204 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.3-1 [14.0 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.0-5 [364 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.3-1 [131 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 11.3.0-1 [526 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.27.0-2 [114 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-2 [89.4 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.4.3-1 [1168 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-biopython amd64 1.85+dfsg-5 [1674 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 60.9 MB in 22s (2780 kB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_amd64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:amd64 (3.13.7-1) ... Setting up libexpat1:amd64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20251 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_amd64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../4-libffi8_3.5.2-2_amd64.deb ... Unpacking libffi8:amd64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../6-libreadline8t64_8.3-3_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_amd64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21266 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.7-1_amd64.deb ... Unpacking python3 (3.13.7-1) ... Selecting previously unselected package python3-numpy-dev:amd64. 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Current default time zone: 'Etc/UTC' Local time is now: Mon Oct 19 14:45:39 UTC 2026. Universal Time is now: Mon Oct 19 14:45:39 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:amd64 (3.12.1-7) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... Setting up libx11-data (2:1.8.12-1) ... Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libimagequant0:amd64 (4.4.0-3) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.50-1) ... Setting up python3-numpy-dev:amd64 (1:2.2.4+ds-1.2) ... Setting up autopoint (0.23.1-2) ... 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Setting up libavif16:amd64 (1.3.0-1) ... Setting up liblapack3:amd64 (3.12.1-7) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libxrender1:amd64 (1:0.9.12-1) ... Setting up libtool (2.5.4-5) ... Setting up fontconfig-config (2.15.0-2.4) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libglib2.0-0t64:amd64 (2.84.4-3) ... No schema files found: doing nothing. Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:amd64 (11.4.5-1) ... Setting up libfontconfig1:amd64 (2.15.0-2.4) ... Setting up libpython3.13-stdlib:amd64 (3.13.7-1) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-freetype (2.5.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:amd64 (1.18.4-1+b1) ... Setting up libraqm0:amd64 (0.10.3-1) ... Setting up python3-typing-extensions (4.15.0-1) ... Setting up python3-numpy (1:2.2.4+ds-1.2) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-charset-normalizer (3.4.3-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up debhelper (13.26) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-pil:amd64 (11.3.0-1) ... Setting up python3-inflect (7.5.0-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-reportlab (4.4.3-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-5) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/84622/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/84622/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/python-cgecore-1.5.6+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-cgecore_1.5.6+ds-2_source.changes dpkg-buildpackage: info: source package python-cgecore dpkg-buildpackage: info: source version 1.5.6+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-cgecore-1.5.6+ds' dh_auto_clean I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf cgecore.egg-info make[1]: Leaving directory '/build/reproducible-path/python-cgecore-1.5.6+ds' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-cgecore/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/argumentparsing.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/cmdline.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/utility.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/blaster.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cgefinder.py to cgefinder.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/argumentparsing.py to argumentparsing.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/species.py to species.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/gramstain.py to gramstain.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/run_blaster.py to run_blaster.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/blaster.py to blaster.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/alignment.py to alignment.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cmdline.py to cmdline.cpython-313.pyc running install_egg_info running egg_info creating cgecore.egg-info writing cgecore.egg-info/PKG-INFO writing dependency_links to cgecore.egg-info/dependency_links.txt writing top-level names to cgecore.egg-info/top_level.txt writing manifest file 'cgecore.egg-info/SOURCES.txt' reading manifest file 'cgecore.egg-info/SOURCES.txt' writing manifest file 'cgecore.egg-info/SOURCES.txt' Copying cgecore.egg-info to /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore-1.5.6.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-cgecore' in '../python3-cgecore_1.5.6+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../python-cgecore_1.5.6+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../python-cgecore_1.5.6+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/84622/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/84622/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/84622 and its subdirectories I: Current time: Tue Oct 20 04:46:41 +14 2026 I: pbuilder-time-stamp: 1792421201 + false + set +x Mon Oct 19 14:46:41 UTC 2026 I: Signing ./b2/python-cgecore_1.5.6+ds-2_amd64.buildinfo as python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc Mon Oct 19 14:46:41 UTC 2026 I: Signed ./b2/python-cgecore_1.5.6+ds-2_amd64.buildinfo as ./b2/python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc Mon Oct 19 14:46:41 UTC 2026 - build #2 for python-cgecore/unstable/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Mon Oct 19 14:46:41 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-MtzVNKii, removing. /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI: total 84 drwxrwxr-x 2 jenkins jenkins 4096 Sep 16 08:21 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 16 08:23 b2 -rw-rw-r-- 1 jenkins jenkins 2148 Nov 19 2024 python-cgecore_1.5.6+ds-2.dsc -rw------- 1 jenkins jenkins 66625 Sep 16 08:21 rbuildlog.u46RZLI /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1: total 132 -rw-r--r-- 1 jenkins jenkins 63020 Sep 16 08:21 build.log -rw-r--r-- 1 jenkins jenkins 2824 Sep 16 08:21 python-cgecore_1.5.6+ds-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2148 Sep 16 08:21 python-cgecore_1.5.6+ds-2.dsc -rw-r--r-- 1 jenkins jenkins 7288 Sep 16 08:21 python-cgecore_1.5.6+ds-2_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 8170 Sep 16 08:21 python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1300 Sep 16 08:21 python-cgecore_1.5.6+ds-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1467 Sep 16 08:21 python-cgecore_1.5.6+ds-2_source.changes -rw-r--r-- 1 jenkins jenkins 28792 Sep 16 08:21 python3-cgecore_1.5.6+ds-2_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2: total 128 -rw-rw-r-- 1 jenkins jenkins 64934 Sep 16 08:23 build.log -rw-r--r-- 1 jenkins jenkins 2824 Sep 16 08:23 python-cgecore_1.5.6+ds-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2148 Sep 16 08:23 python-cgecore_1.5.6+ds-2.dsc -rw-rw-r-- 1 jenkins jenkins 7288 Sep 16 08:23 python-cgecore_1.5.6+ds-2_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 8170 Sep 16 08:23 python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 1300 Sep 16 08:23 python-cgecore_1.5.6+ds-2_amd64.changes -rw-rw-r-- 1 jenkins jenkins 1467 Sep 16 08:23 python-cgecore_1.5.6+ds-2_source.changes -rw-r--r-- 1 jenkins jenkins 28792 Sep 16 08:23 python3-cgecore_1.5.6+ds-2_all.deb Tue Sep 16 08:23:41 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Tue Sep 16 08:23:41 UTC 2025 I: python-cgecore_1.5.6+ds-2_amd64.changes: Format: 1.8 Date: Tue, 19 Nov 2024 21:23:35 +0100 Source: python-cgecore Binary: python3-cgecore Architecture: all Version: 1.5.6+ds-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Alexandre Detiste Description: python3-cgecore - Python3 module for the Center for Genomic Epidemiology Closes: 1084632 1085895 Changes: python-cgecore (1.5.6+ds-2) unstable; urgency=medium . * Team upload. * Patch out regexp that causes SyntaxWarning's (Closes: #1085895) * Patch out usage of "pipes" module removed from Py3.13 (Closes: #1084632) * Use dh-sequence-python3 Checksums-Sha1: 83ec95cc105557deb2db6ac71094cbf362cefeea 7288 python-cgecore_1.5.6+ds-2_amd64.buildinfo f79dd97e395718a6daa2232cc1b86f4b9b2e4b49 28792 python3-cgecore_1.5.6+ds-2_all.deb Checksums-Sha256: 0326935b801e46804ecabf110aaa501fd754245e77a7ec888fd35964b34cbc3a 7288 python-cgecore_1.5.6+ds-2_amd64.buildinfo eaa1450e61fe0cec099142bb72d6b79ba149954df8520568bd7cc67dd70cd880 28792 python3-cgecore_1.5.6+ds-2_all.deb Files: ff38e681f7e760973a2504149c33b49d 7288 python optional python-cgecore_1.5.6+ds-2_amd64.buildinfo f7d91f5bdd354accd3829d58ff16bb64 28792 python optional python3-cgecore_1.5.6+ds-2_all.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-cgecore_1.5.6+ds-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-cgecore_1.5.6+ds-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/python-cgecore_1.5.6+ds-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/python-cgecore_1.5.6+ds-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/amd64/python-cgecore_1.5.6+ds-2_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/python-cgecore_1.5.6+ds-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-09-16 08:21:00.663710113 +0000 +++ b2/build.log 2025-09-16 08:23:41.683914577 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Sep 15 20:14:48 -12 2025 -I: pbuilder-time-stamp: 1758010488 +I: Current time: Tue Oct 20 04:44:01 +14 2026 +I: pbuilder-time-stamp: 1792421041 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -24,53 +24,85 @@ dpkg-source: info: applying python3.13.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/427264/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 19 14:44 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='8204c656907e48c79386dc7f89f7ce2b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='427264' - PS1='# ' - PS2='> ' + INVOCATION_ID=dd7a49fab3eb4fa4be2ae8870c858981 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=84622 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_OWps --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1 --logfile b1/build.log python-cgecore_1.5.6+ds-2.dsc' - SUDO_GID='111' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/pbuilderrc_mqoU --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2 --logfile b2/build.log python-cgecore_1.5.6+ds-2.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos11-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/427264/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -232,7 +264,7 @@ Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] -Fetched 60.9 MB in 15s (3955 kB/s) +Fetched 60.9 MB in 22s (2780 kB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) @@ -632,8 +664,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Sep 16 08:19:21 UTC 2025. -Universal Time is now: Tue Sep 16 08:19:21 UTC 2025. +Local time is now: Mon Oct 19 14:45:39 UTC 2026. +Universal Time is now: Mon Oct 19 14:45:39 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... @@ -737,7 +769,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-cgecore-1.5.6+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-cgecore_1.5.6+ds-2_source.changes +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-cgecore-1.5.6+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-cgecore_1.5.6+ds-2_source.changes dpkg-buildpackage: info: source package python-cgecore dpkg-buildpackage: info: source version 1.5.6+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -770,20 +806,20 @@ running build running build_py creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore +copying cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore +copying cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore -copying cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore -copying cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore copying cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore -copying cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore +copying cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster -copying cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster -copying cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster copying cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster +copying cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster +copying cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster creating /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo +copying cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo -copying cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo copying cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo dh_auto_test -O--buildsystem=pybuild @@ -817,44 +853,44 @@ running install_lib creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/utility.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/utility.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/cmdline.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/argumentparsing.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ -creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster -creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/blaster.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/cmdline.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__pycache__/utility.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__pycache__ +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/argumentparsing.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__pycache__ copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/species.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_neg.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gram_pos.txt -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo -copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cgefinder.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/argumentparsing.py to argumentparsing.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__init__.py to __init__.cpython-313.pyc +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/organisminfo/gramstain.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo +creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/run_blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/blaster.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster +creating /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__pycache__/blaster.cpython-313.pyc -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__pycache__ +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/blaster/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/__init__.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/alignment.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore +copying /build/reproducible-path/python-cgecore-1.5.6+ds/.pybuild/cpython3_3.13_cgecore/build/cgecore/cmdline.py -> /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/utility.py to utility.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/blaster.py to blaster.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/run_blaster.py to run_blaster.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cmdline.py to cmdline.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/alignment.py to alignment.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cgefinder.py to cgefinder.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/argumentparsing.py to argumentparsing.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/species.py to species.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/gramstain.py to gramstain.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/organisminfo/species.py to species.cpython-313.pyc -byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cgefinder.py to cgefinder.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/run_blaster.py to run_blaster.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/blaster.py to blaster.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/blaster/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/alignment.py to alignment.cpython-313.pyc +byte-compiling /build/reproducible-path/python-cgecore-1.5.6+ds/debian/python3-cgecore/usr/lib/python3.13/dist-packages/cgecore/cmdline.py to cmdline.cpython-313.pyc running install_egg_info running egg_info creating cgecore.egg-info @@ -889,12 +925,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/84622/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/427264 and its subdirectories -I: Current time: Mon Sep 15 20:21:00 -12 2025 -I: pbuilder-time-stamp: 1758010860 +I: removing directory /srv/workspace/pbuilder/84622 and its subdirectories +I: Current time: Tue Oct 20 04:46:41 +14 2026 +I: pbuilder-time-stamp: 1792421201 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/python-cgecore_1.5.6+ds-2.diff: 85.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/python-cgecore_1.5.6+ds-2.diff.gz b2/build.log: 82.7% -- replaced with stdout Compressing the 1st log... b1/build.log: 83.2% -- replaced with stdout Tue Sep 16 08:23:42 UTC 2025 I: diffoscope 306 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_python-cgecore_unstable_amd64_1758011022 + touch /var/log/reproducible-builds/diffoscope_stamp_python-cgecore_unstable_amd64_1758011022 + RESULT=0 + systemd-run '--description=diffoscope on python-cgecore/1.5.6+ds-2 in unstable/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_27-71121 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI --run-session -c jenkins-reproducible-unstable-diffoscope-47fba0e1-229e-4ec2-acc4-ba5e14f5cfe5 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/dbd-tmp-uEoyyt3 ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/python-cgecore_1.5.6+ds-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/python-cgecore_1.5.6+ds-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/python-cgecore_1.5.6+ds-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1/python-cgecore_1.5.6+ds-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2/python-cgecore_1.5.6+ds-2_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_27-71121.service; invocation ID: 0d236fa3d8924901b9716837a12f05f8 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/python-cgecore_1.5.6+ds-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/python-cgecore_1.5.6+ds-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/python-cgecore_1.5.6+ds-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b1/python-cgecore_1.5.6+ds-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.YZyiFQQI/b2/python-cgecore_1.5.6+ds-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 237ms CPU time consumed: 192ms Memory peak: 18.8M (swap: 0B) _ _ _ __ _ _| |_| |__ ___ _ __ ___ __ _ ___ ___ ___ _ __ ___ | '_ \| | | | __| '_ \ / _ \| '_ \ _____ / __/ _` |/ _ \/ __/ _ \| '__/ _ \ | |_) | |_| | |_| | | | (_) | | | |_____| (_| (_| | __/ (_| (_) | | | __/ | .__/ \__, |\__|_| |_|\___/|_| |_| \___\__, |\___|\___\___/|_| \___| |_| |___/ |___/ Tue Sep 16 08:28:36 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Tue Sep 16 08:28:36 UTC 2025 I: python-cgecore from unstable built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-09-16 08:28:37] INFO: Starting at 2025-09-16 08:28:37.046200 [2025-09-16 08:28:37] INFO: Generating the pages of 1 package(s) [2025-09-16 08:28:37] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/python-cgecore didn't produce a buildlog, even though it has been built. [2025-09-16 08:28:37] INFO: Finished at 2025-09-16 08:28:37.531511, took: 0:00:00.485317 Tue Sep 16 08:28:37 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/python-cgecore.html Tue Sep 16 08:28:37 UTC 2025 I: Removing signed python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc files: removed './b1/python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc' removed './b2/python-cgecore_1.5.6+ds-2_amd64.buildinfo.asc' 1758011318 amd64 unstable python-cgecore Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-cgecore_1.5.6+ds-2.rbuild.log: 80.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-cgecore_1.5.6+ds-2.rbuild.log.gz [2025-09-16 08:28:39] INFO: Starting at 2025-09-16 08:28:39.015503 [2025-09-16 08:28:39] INFO: Generating the pages of 1 package(s) [2025-09-16 08:28:39] INFO: Finished at 2025-09-16 08:28:39.554024, took: 0:00:00.538526 All cleanup done. Tue Sep 16 08:28:39 UTC 2025 - total duration: 0h 14m 2s. Tue Sep 16 08:28:39 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-C5dDZA0i, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 14min 4.941s CPU time consumed: 4.681s Memory peak: 37.1M (swap: 0B)