Running as unit: rb-build-amd64_28-72987.service; invocation ID: b62d82b2cec945a18d8e9520886000d3 ==================================================================================== Thu Sep 18 10:52:16 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_28) on jenkins, called using "ionos15-amd64 ionos11-amd64" as arguments. Thu Sep 18 10:52:16 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-wNUmTTvb" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Sep 18 10:52:16 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Thu Sep 18 10:52:16 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-HNKfqc' Thu Sep 18 10:52:16 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Thu Sep 18 10:52:16 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-2XkZpO' ok, let's check if dnapi is building anywhere yet… ok, dnapi is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of dnapi in forky on amd64 on jenkins now. 1st build will be done on ionos15-amd64.debian.net. 2nd build will be done on ionos11-amd64.debian.net. ============================================================================= Thu Sep 18 10:52:29 UTC 2025 I: starting to build dnapi/forky/amd64 on jenkins on '2025-09-18 10:52' Thu Sep 18 10:52:29 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_28/72987/console.log 1758192749 amd64 forky dnapi Thu Sep 18 10:52:29 UTC 2025 I: Downloading source for forky/dnapi=1.1-3 --2025-09-18 10:52:29-- http://deb.debian.org/debian/pool/main/d/dnapi/dnapi_1.1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2098 (2.0K) [text/prs.lines.tag] Saving to: ‘dnapi_1.1-3.dsc’ 0K .. 100% 231M=0s 2025-09-18 10:52:29 (231 MB/s) - ‘dnapi_1.1-3.dsc’ saved [2098/2098] --2025-09-18 10:52:29-- http://deb.debian.org/debian/pool/main/d/dnapi/dnapi_1.1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2098 (2.0K) [text/prs.lines.tag] Saving to: ‘dnapi_1.1-3.dsc’ 0K .. 100% 231M=0s 2025-09-18 10:52:29 (231 MB/s) - ‘dnapi_1.1-3.dsc’ saved [2098/2098] Thu Sep 18 10:52:29 UTC 2025 I: dnapi_1.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dnapi Binary: dnapi, python3-dnapilib Architecture: all Version: 1.1-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/jnktsj/DNApi/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/dnapi Vcs-Git: https://salsa.debian.org/med-team/dnapi.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: python3, python3-pytest Build-Depends: debhelper-compat (= 13), dh-python, python3-setuptools, python3-all Package-List: dnapi deb science optional arch=all python3-dnapilib deb python optional arch=all Checksums-Sha1: 9057cc0e09ce7653e3f16c7c0ec3ddc1aba616aa 8053219 dnapi_1.1.orig.tar.gz 3564a4972a755d311f6193f74e699e616d5594ba 5812 dnapi_1.1-3.debian.tar.xz Checksums-Sha256: fe98bc9f129536b6a8f42a5d594c924c04d4d6c74dd1ba410eaac01f82c4e412 8053219 dnapi_1.1.orig.tar.gz 97da157d9d9a8ba323aff8bb9b7dca29ffa680e03c90fe5bd589f20020609e9b 5812 dnapi_1.1-3.debian.tar.xz Files: 8557cd4a1584f894944160f22b486627 8053219 dnapi_1.1.orig.tar.gz a1c467e81ab8a2eb78c2bc5030af65e0 5812 dnapi_1.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAl+UlbUUHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafGW0g//d472i9H9BqTB/1m+TKCJSj7haowV V9SmlhIvCGVXvitrrO90LI1lnN2kD1KKkh8VpliYksxWc140N+iruLB3wZBht/lt MHqS4IG2/+0KPo6sQdhZaCdTec3NcAPQuvKFh2D13WLRY0cwg4BOMhP8r0lpa86L o2soqrb97kxEaOEzE7YvQk2vz+wBrKAaSIQLwTWQ0bwjZN63OnSbx1b7LA8CR7fu H7g0i2rOk4LKhlVt4mQ8L1tapWXjUrwvrvhjBZ6V9/RJ06S9l5OhqJjJizwJAex+ 09hcI5puYEWUHdo8nNWvWJwnHb5eezJWeni25vDE1/nFTt1EqTmYw4GsQEPPusLh Ggr54Y8hdYaISk4urZF8IDb4PxGSO9RbXT+cNcEnjuvv7njrwcQnlsR9PARpfqqB 2fOTBf86+eb9BqpmGre2nB09M9Ux+02YLoudeM2wgF/0zOy79HG4v+5+MtRCK68O e0RzKLLNbK6d8L0gc81MbC+eICNc2A33kvgQuw1w44mTYAcMGgK9/XJhYFWbH44I D1/343UB5ZFcW8urjGIyQDhZpi+XRBhdxIOA9E+CIuDkcSg6M8GegfxO555KGH/h 47taxrRD/tjzkB1R9uPRT4SFin/r8X2/DGdDvhHnDdsTf+tnAnVy7vnFEU/VdQh2 avbh+zDwxN0c7/M= =2e+A -----END PGP SIGNATURE----- Thu Sep 18 10:52:29 UTC 2025 I: Checking whether the package is not for us Thu Sep 18 10:52:29 UTC 2025 I: Starting 1st build on remote node ionos15-amd64.debian.net. Thu Sep 18 10:52:29 UTC 2025 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Thu Sep 18 10:52:29 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Thu Sep 18 10:52:29 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-so2ycb' ==================================================================================== Wed Oct 21 17:15:29 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "1 dnapi forky /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD 1.1-3" as arguments. Wed Oct 21 17:15:29 UTC 2026 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-erOWgiN4" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Oct 21 17:15:29 UTC 2026 I: Downloading source for forky/dnapi=1.1-3 Reading package lists... NOTICE: 'dnapi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dnapi.git Please use: git clone https://salsa.debian.org/med-team/dnapi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 8061 kB of source archives. Get:1 http://deb.debian.org/debian forky/main dnapi 1.1-3 (dsc) [2098 B] Get:2 http://deb.debian.org/debian forky/main dnapi 1.1-3 (tar) [8053 kB] Get:3 http://deb.debian.org/debian forky/main dnapi 1.1-3 (diff) [5812 B] Fetched 8061 kB in 0s (130 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'dnapi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dnapi.git Please use: git clone https://salsa.debian.org/med-team/dnapi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 8061 kB of source archives. Get:1 http://deb.debian.org/debian forky/main dnapi 1.1-3 (dsc) [2098 B] Get:2 http://deb.debian.org/debian forky/main dnapi 1.1-3 (tar) [8053 kB] Get:3 http://deb.debian.org/debian forky/main dnapi 1.1-3 (diff) [5812 B] Fetched 8061 kB in 0s (130 MB/s) Download complete and in download only mode ============================================================================= Building dnapi in forky on amd64 on ionos15-amd64 now. Date: Wed Oct 21 17:15:29 UTC 2026 Date UTC: Wed Oct 21 17:15:29 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Oct 21 05:15:30 -12 2026 I: pbuilder-time-stamp: 1792602930 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dnapi_1.1-3.dsc] I: copying [./dnapi_1.1.orig.tar.gz] I: copying [./dnapi_1.1-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./dnapi_1.1-3.dsc: no acceptable signature found dpkg-source: info: extracting dnapi in dnapi-1.1 dpkg-source: info: unpacking dnapi_1.1.orig.tar.gz dpkg-source: info: unpacking dnapi_1.1-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/588590/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='de7b38f3338b418093f1723ea918043f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='588590' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_g8e6 --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1 --logfile b1/build.log dnapi_1.1-3.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/588590/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-setuptools, python3-all dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 19.2 MB of archives. After unpacking 74.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-5 [540 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 36 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 37 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 debhelper all 13.26 [939 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 dh-python all 6.20250414 [116 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 python3-all amd64 3.13.7-1 [1048 B] Get: 46 http://deb.debian.org/debian forky/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 51 http://deb.debian.org/debian forky/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 19.2 MB in 0s (130 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_amd64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:amd64 (3.13.7-1) ... Setting up libexpat1:amd64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20251 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_amd64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../4-libffi8_3.5.2-2_amd64.deb ... Unpacking libffi8:amd64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../6-libreadline8t64_8.3-3_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_amd64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.26) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Oct 21 17:16:19 UTC 2026. Universal Time is now: Wed Oct 21 17:16:19 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up libffi8:amd64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up netbase (6.5) ... Setting up readline-common (8.3-3) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:amd64 (3.13.7-1) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-typing-extensions (4.15.0-1) ... Setting up dh-python (6.20250414) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dnapi-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dnapi_1.1-3_source.changes dpkg-buildpackage: info: source package dnapi dpkg-buildpackage: info: source version 1.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from dnapi-1.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running clean removing '/build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_py creating /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib running build_scripts creating build/scripts-3.13 copying and adjusting dnapi.py -> build/scripts-3.13 copying and adjusting utils/qual_offset.py -> build/scripts-3.13 copying and adjusting utils/qual_trim.py -> build/scripts-3.13 copying and adjusting utils/to_fasta.py -> build/scripts-3.13 changing mode of build/scripts-3.13/dnapi.py from 644 to 755 changing mode of build/scripts-3.13/qual_offset.py from 644 to 755 changing mode of build/scripts-3.13/qual_trim.py from 644 to 755 changing mode of build/scripts-3.13/to_fasta.py from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_scripts running install_lib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/kmer.py to kmer.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/apred.py to apred.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/exhaust.py to exhaust.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/io_utils.py to io_utils.cpython-313.pyc running install_egg_info running egg_info creating DNApi.egg-info writing DNApi.egg-info/PKG-INFO writing dependency_links to DNApi.egg-info/dependency_links.txt writing top-level names to DNApi.egg-info/top_level.txt writing manifest file 'DNApi.egg-info/SOURCES.txt' reading manifest file 'DNApi.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'DNApi.egg-info/SOURCES.txt' Copying DNApi.egg-info to /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/DNApi-1.1.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_trim.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/dnapi.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/to_fasta.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_offset.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_trim.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/dnapi.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/to_fasta.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_offset.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_install # Move user applications into separate package mkdir -p debian/dnapi/usr mv debian/python3-dnapilib/usr/bin debian/dnapi/usr make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_trim.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/dnapi.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_offset.py dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_compress find debian -name '*.fq' -exec gzip \{\} \; make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'dnapi' in '../dnapi_1.1-3_all.deb'. dpkg-deb: building package 'python3-dnapilib' in '../python3-dnapilib_1.1-3_all.deb'. dpkg-genbuildinfo --build=binary -O../dnapi_1.1-3_amd64.buildinfo dpkg-genchanges --build=binary -O../dnapi_1.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dnapi-1.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/588590 and its subdirectories I: Current time: Wed Oct 21 05:16:49 -12 2026 I: pbuilder-time-stamp: 1792603009 Wed Oct 21 17:16:49 UTC 2026 I: Signing ./b1/dnapi_1.1-3_amd64.buildinfo as dnapi_1.1-3_amd64.buildinfo.asc Wed Oct 21 17:16:49 UTC 2026 I: Signed ./b1/dnapi_1.1-3_amd64.buildinfo as ./b1/dnapi_1.1-3_amd64.buildinfo.asc Wed Oct 21 17:16:49 UTC 2026 - build #1 for dnapi/forky/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Wed Oct 21 17:16:49 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-erOWgiN4, removing. /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 10:53 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 10:52 b2 -rw-rw-r-- 1 jenkins jenkins 2098 Oct 24 2020 dnapi_1.1-3.dsc -rw------- 1 jenkins jenkins 3170 Sep 18 10:52 rbuildlog.5PFFyFl /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1: total 7820 -rw-r--r-- 1 jenkins jenkins 38818 Sep 18 10:53 build.log -rw-r--r-- 1 jenkins jenkins 5812 Sep 18 10:53 dnapi_1.1-3.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2098 Sep 18 10:53 dnapi_1.1-3.dsc -rw-r--r-- 1 jenkins jenkins 7920528 Sep 18 10:53 dnapi_1.1-3_all.deb -rw-r--r-- 1 jenkins jenkins 5675 Sep 18 10:53 dnapi_1.1-3_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 6557 Sep 18 10:53 dnapi_1.1-3_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1368 Sep 18 10:53 dnapi_1.1-3_amd64.changes -rw-r--r-- 1 jenkins jenkins 1152 Sep 18 10:53 dnapi_1.1-3_source.changes -rw-r--r-- 1 jenkins jenkins 7204 Sep 18 10:53 python3-dnapilib_1.1-3_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2: total 0 Thu Sep 18 10:53:50 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Oct 21 05:15:30 -12 2026 I: pbuilder-time-stamp: 1792602930 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dnapi_1.1-3.dsc] I: copying [./dnapi_1.1.orig.tar.gz] I: copying [./dnapi_1.1-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./dnapi_1.1-3.dsc: no acceptable signature found dpkg-source: info: extracting dnapi in dnapi-1.1 dpkg-source: info: unpacking dnapi_1.1.orig.tar.gz dpkg-source: info: unpacking dnapi_1.1-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/588590/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='de7b38f3338b418093f1723ea918043f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='588590' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_g8e6 --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1 --logfile b1/build.log dnapi_1.1-3.dsc' SUDO_GID='111' SUDO_HOME='/var/lib/jenkins' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/588590/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-setuptools, python3-all dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 19.2 MB of archives. After unpacking 74.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-5 [540 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 36 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 37 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 debhelper all 13.26 [939 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 dh-python all 6.20250414 [116 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 python3-all amd64 3.13.7-1 [1048 B] Get: 46 http://deb.debian.org/debian forky/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 51 http://deb.debian.org/debian forky/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 19.2 MB in 0s (130 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_amd64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:amd64 (3.13.7-1) ... Setting up libexpat1:amd64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20251 files and directories currently installed.) 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_amd64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.26) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Oct 21 17:16:19 UTC 2026. Universal Time is now: Wed Oct 21 17:16:19 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up libffi8:amd64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up netbase (6.5) ... Setting up readline-common (8.3-3) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:amd64 (3.13.7-1) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-typing-extensions (4.15.0-1) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up python3-all (3.13.7-1) ... Setting up debhelper (13.26) ... Setting up python3-inflect (7.5.0-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dnapi-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dnapi_1.1-3_source.changes dpkg-buildpackage: info: source package dnapi dpkg-buildpackage: info: source version 1.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from dnapi-1.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running clean removing '/build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_py creating /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib running build_scripts creating build/scripts-3.13 copying and adjusting dnapi.py -> build/scripts-3.13 copying and adjusting utils/qual_offset.py -> build/scripts-3.13 copying and adjusting utils/qual_trim.py -> build/scripts-3.13 copying and adjusting utils/to_fasta.py -> build/scripts-3.13 changing mode of build/scripts-3.13/dnapi.py from 644 to 755 changing mode of build/scripts-3.13/qual_offset.py from 644 to 755 changing mode of build/scripts-3.13/qual_trim.py from 644 to 755 changing mode of build/scripts-3.13/to_fasta.py from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_scripts running install_lib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/kmer.py to kmer.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/apred.py to apred.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/exhaust.py to exhaust.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/io_utils.py to io_utils.cpython-313.pyc running install_egg_info running egg_info creating DNApi.egg-info writing DNApi.egg-info/PKG-INFO writing dependency_links to DNApi.egg-info/dependency_links.txt writing top-level names to DNApi.egg-info/top_level.txt writing manifest file 'DNApi.egg-info/SOURCES.txt' reading manifest file 'DNApi.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'DNApi.egg-info/SOURCES.txt' Copying DNApi.egg-info to /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/DNApi-1.1.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_trim.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/dnapi.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/to_fasta.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_offset.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_trim.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/dnapi.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/to_fasta.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_offset.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_install # Move user applications into separate package mkdir -p debian/dnapi/usr mv debian/python3-dnapilib/usr/bin debian/dnapi/usr make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_trim.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/dnapi.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_offset.py dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_compress find debian -name '*.fq' -exec gzip \{\} \; make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'dnapi' in '../dnapi_1.1-3_all.deb'. dpkg-deb: building package 'python3-dnapilib' in '../python3-dnapilib_1.1-3_all.deb'. dpkg-genbuildinfo --build=binary -O../dnapi_1.1-3_amd64.buildinfo dpkg-genchanges --build=binary -O../dnapi_1.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dnapi-1.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/588590 and its subdirectories I: Current time: Wed Oct 21 05:16:49 -12 2026 I: pbuilder-time-stamp: 1792603009 Thu Sep 18 10:53:50 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Thu Sep 18 10:53:50 UTC 2025 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Thu Sep 18 10:53:50 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos11-amd64.debian.net is marked as down. Thu Sep 18 10:53:50 UTC 2025 - checking via ssh if ionos11-amd64.debian.net is up. removed '/tmp/read-only-fs-test-inUf3U' ==================================================================================== Thu Sep 18 10:53:50 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos11-amd64, called using "2 dnapi forky /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD 1.1-3" as arguments. Thu Sep 18 10:53:50 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-R82XCGN5" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Sep 18 10:53:50 UTC 2025 I: Downloading source for forky/dnapi=1.1-3 Reading package lists... NOTICE: 'dnapi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dnapi.git Please use: git clone https://salsa.debian.org/med-team/dnapi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 8061 kB of source archives. Get:1 http://deb.debian.org/debian forky/main dnapi 1.1-3 (dsc) [2098 B] Get:2 http://deb.debian.org/debian forky/main dnapi 1.1-3 (tar) [8053 kB] Get:3 http://deb.debian.org/debian forky/main dnapi 1.1-3 (diff) [5812 B] Fetched 8061 kB in 0s (138 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'dnapi' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dnapi.git Please use: git clone https://salsa.debian.org/med-team/dnapi.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 8061 kB of source archives. Get:1 http://deb.debian.org/debian forky/main dnapi 1.1-3 (dsc) [2098 B] Get:2 http://deb.debian.org/debian forky/main dnapi 1.1-3 (tar) [8053 kB] Get:3 http://deb.debian.org/debian forky/main dnapi 1.1-3 (diff) [5812 B] Fetched 8061 kB in 0s (138 MB/s) Download complete and in download only mode ============================================================================= Re-Building dnapi in forky on amd64 on ionos11-amd64 now. Date: Thu Sep 18 10:53:51 UTC 2025 Date UTC: Thu Sep 18 10:53:51 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_j4nK + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' dnapi = debian-installer -o dnapi = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' dnapi = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_j4nK --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2 --logfile b2/build.log dnapi_1.1-3.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Sep 19 00:53:51 +14 2025 I: pbuilder-time-stamp: 1758192831 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dnapi_1.1-3.dsc] I: copying [./dnapi_1.1.orig.tar.gz] I: copying [./dnapi_1.1-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./dnapi_1.1-3.dsc: no acceptable signature found dpkg-source: info: extracting dnapi in dnapi-1.1 dpkg-source: info: unpacking dnapi_1.1.orig.tar.gz dpkg-source: info: unpacking dnapi_1.1-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Sep 18 10:54 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DIRSTACK=() DISTRIBUTION=forky EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=c2335da5294b4447ba6eb6f85886825c LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2631896 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_j4nK --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2 --logfile b2/build.log dnapi_1.1-3.dsc' SUDO_GID=111 SUDO_HOME=/var/lib/jenkins SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-setuptools, python3-all dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 19.2 MB of archives. After unpacking 74.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.1-2 [108 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 30 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-5 [540 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 36 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 37 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 debhelper all 13.26 [939 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 dh-python all 6.20250414 [116 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 python3-all amd64 3.13.7-1 [1048 B] Get: 46 http://deb.debian.org/debian forky/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 51 http://deb.debian.org/debian forky/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 19.2 MB in 12s (1550 kB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_amd64.deb ... Unpacking libexpat1:amd64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.7-1) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_amd64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.26) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Sep 18 10:55:48 UTC 2025. Universal Time is now: Thu Sep 18 10:55:48 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up libffi8:amd64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up netbase (6.5) ... Setting up readline-common (8.3-3) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:amd64 (3.13.7-1) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-typing-extensions (4.15.0-1) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up python3-all (3.13.7-1) ... Setting up debhelper (13.26) ... Setting up python3-inflect (7.5.0-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for forky I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/dnapi-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dnapi_1.1-3_source.changes dpkg-buildpackage: info: source package dnapi dpkg-buildpackage: info: source version 1.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from dnapi-1.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running clean removing '/build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_py creating /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib running build_scripts creating build/scripts-3.13 copying and adjusting dnapi.py -> build/scripts-3.13 copying and adjusting utils/qual_offset.py -> build/scripts-3.13 copying and adjusting utils/qual_trim.py -> build/scripts-3.13 copying and adjusting utils/to_fasta.py -> build/scripts-3.13 changing mode of build/scripts-3.13/dnapi.py from 644 to 755 changing mode of build/scripts-3.13/qual_offset.py from 644 to 755 changing mode of build/scripts-3.13/qual_trim.py from 644 to 755 changing mode of build/scripts-3.13/to_fasta.py from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build; python3.13 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_scripts running install_lib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/kmer.py to kmer.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/exhaust.py to exhaust.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/io_utils.py to io_utils.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/apred.py to apred.cpython-313.pyc running install_egg_info running egg_info creating DNApi.egg-info writing DNApi.egg-info/PKG-INFO writing dependency_links to DNApi.egg-info/dependency_links.txt writing top-level names to DNApi.egg-info/top_level.txt writing manifest file 'DNApi.egg-info/SOURCES.txt' reading manifest file 'DNApi.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'DNApi.egg-info/SOURCES.txt' Copying DNApi.egg-info to /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/DNApi-1.1.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/dnapi.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_offset.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_trim.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/to_fasta.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/dnapi.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_offset.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_trim.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/to_fasta.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_install # Move user applications into separate package mkdir -p debian/dnapi/usr mv debian/python3-dnapilib/usr/bin debian/dnapi/usr make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/dnapi.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_offset.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_trim.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/to_fasta.py dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_compress find debian -name '*.fq' -exec gzip \{\} \; make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'dnapi' in '../dnapi_1.1-3_all.deb'. dpkg-deb: building package 'python3-dnapilib' in '../python3-dnapilib_1.1-3_all.deb'. dpkg-genbuildinfo --build=binary -O../dnapi_1.1-3_amd64.buildinfo dpkg-genchanges --build=binary -O../dnapi_1.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dnapi-1.1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2631896 and its subdirectories I: Current time: Fri Sep 19 00:56:13 +14 2025 I: pbuilder-time-stamp: 1758192973 + false + set +x Thu Sep 18 10:56:13 UTC 2025 I: Signing ./b2/dnapi_1.1-3_amd64.buildinfo as dnapi_1.1-3_amd64.buildinfo.asc Thu Sep 18 10:56:13 UTC 2025 I: Signed ./b2/dnapi_1.1-3_amd64.buildinfo as ./b2/dnapi_1.1-3_amd64.buildinfo.asc Thu Sep 18 10:56:13 UTC 2025 - build #2 for dnapi/forky/amd64 on ionos11-amd64 done. Starting cleanup. All cleanup done. Thu Sep 18 10:56:13 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-R82XCGN5, removing. /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD: total 56 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 10:53 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 10:56 b2 -rw-rw-r-- 1 jenkins jenkins 2098 Oct 24 2020 dnapi_1.1-3.dsc -rw------- 1 jenkins jenkins 42277 Sep 18 10:53 rbuildlog.5PFFyFl /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1: total 7832 -rw-r--r-- 1 jenkins jenkins 38818 Sep 18 10:53 build.log -rw-r--r-- 1 jenkins jenkins 5812 Sep 18 10:53 dnapi_1.1-3.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2098 Sep 18 10:53 dnapi_1.1-3.dsc -rw-r--r-- 1 jenkins jenkins 7920528 Sep 18 10:53 dnapi_1.1-3_all.deb -rw-r--r-- 1 jenkins jenkins 5675 Sep 18 10:53 dnapi_1.1-3_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 6557 Sep 18 10:53 dnapi_1.1-3_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1368 Sep 18 10:53 dnapi_1.1-3_amd64.changes -rw-r--r-- 1 jenkins jenkins 1152 Sep 18 10:53 dnapi_1.1-3_source.changes -rw-r--r-- 1 jenkins jenkins 7204 Sep 18 10:53 python3-dnapilib_1.1-3_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2: total 7820 -rw-rw-r-- 1 jenkins jenkins 40747 Sep 18 10:56 build.log -rw-r--r-- 1 jenkins jenkins 5812 Sep 18 10:56 dnapi_1.1-3.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2098 Sep 18 10:56 dnapi_1.1-3.dsc -rw-r--r-- 1 jenkins jenkins 7920528 Sep 18 10:56 dnapi_1.1-3_all.deb -rw-rw-r-- 1 jenkins jenkins 5675 Sep 18 10:56 dnapi_1.1-3_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 6557 Sep 18 10:56 dnapi_1.1-3_amd64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 1368 Sep 18 10:56 dnapi_1.1-3_amd64.changes -rw-rw-r-- 1 jenkins jenkins 1152 Sep 18 10:56 dnapi_1.1-3_source.changes -rw-r--r-- 1 jenkins jenkins 7204 Sep 18 10:56 python3-dnapilib_1.1-3_all.deb Thu Sep 18 10:56:13 UTC 2025 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Thu Sep 18 10:56:13 UTC 2025 I: dnapi_1.1-3_amd64.changes: Format: 1.8 Date: Sun, 25 Oct 2020 01:47:05 +0530 Source: dnapi Binary: dnapi python3-dnapilib Architecture: all Version: 1.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: dnapi - adapter prediction for small RNA sequencing - utils python3-dnapilib - adapter prediction for small RNA sequencing - library Changes: dnapi (1.1-3) unstable; urgency=medium . * Team Upload. * Add autopkgtests * compat: 13 Checksums-Sha1: 010b07d18ada6766d9b66bace38bb45289129c96 7920528 dnapi_1.1-3_all.deb 105ac338b37368a0d92ea660820cd2b336e003c5 5675 dnapi_1.1-3_amd64.buildinfo 2114962585249728ce34094c452d5ce71e6ee821 7204 python3-dnapilib_1.1-3_all.deb Checksums-Sha256: 650c0c5b2c59af4f2a01112d70231dfdb7f1c82cb305b1327b03273f795e5c15 7920528 dnapi_1.1-3_all.deb 2f91c646a6843dde5055fcd1b2b5d0db1031afe47a62db0b75ae2528c23eeed7 5675 dnapi_1.1-3_amd64.buildinfo 21c6db52fc9456215caf2a630ac8b870f94f5a1810760947bfa2c8df1ba8428e 7204 python3-dnapilib_1.1-3_all.deb Files: 7e65a6226babc26c689c954a71a7e715 7920528 science optional dnapi_1.1-3_all.deb af410b8cecb9ed6f32b18ba6b8d857b5 5675 science optional dnapi_1.1-3_amd64.buildinfo 866223b5bb7c654c339999b507cf4e9c 7204 python optional python3-dnapilib_1.1-3_all.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/dnapi_1.1-3.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/dnapi_1.1-3.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/dnapi_1.1-3.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/dnapi_1.1-3.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/amd64/dnapi_1.1-3_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/dnapi_1.1-3.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-09-18 10:53:50.075068559 +0000 +++ b2/build.log 2025-09-18 10:56:13.415239463 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Oct 21 05:15:30 -12 2026 -I: pbuilder-time-stamp: 1792602930 +I: Current time: Fri Sep 19 00:53:51 +14 2025 +I: pbuilder-time-stamp: 1758192831 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -22,53 +22,85 @@ dpkg-source: info: unpacking dnapi_1.1-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/588590/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 18 10:54 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='de7b38f3338b418093f1723ea918043f' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='588590' - PS1='# ' - PS2='> ' + INVOCATION_ID=c2335da5294b4447ba6eb6f85886825c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2631896 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_g8e6 --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1 --logfile b1/build.log dnapi_1.1-3.dsc' - SUDO_GID='111' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/pbuilderrc_j4nK --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2 --logfile b2/build.log dnapi_1.1-3.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/588590/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -166,7 +198,7 @@ Get: 54 http://deb.debian.org/debian forky/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] -Fetched 19.2 MB in 0s (130 MB/s) +Fetched 19.2 MB in 12s (1550 kB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) @@ -362,8 +394,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Oct 21 17:16:19 UTC 2026. -Universal Time is now: Wed Oct 21 17:16:19 UTC 2026. +Local time is now: Thu Sep 18 10:55:48 UTC 2025. +Universal Time is now: Thu Sep 18 10:55:48 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -417,7 +449,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dnapi-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dnapi_1.1-3_source.changes +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dnapi-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dnapi_1.1-3_source.changes dpkg-buildpackage: info: source package dnapi dpkg-buildpackage: info: source version 1.1-3 dpkg-buildpackage: info: source distribution unstable @@ -486,11 +522,11 @@ running build running build_py creating /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib +copying dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib -copying dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib -copying dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib copying dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib +copying dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib running build_scripts creating build/scripts-3.13 copying and adjusting dnapi.py -> build/scripts-3.13 @@ -546,18 +582,18 @@ running install_lib creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib +copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/kmer.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib -copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib -creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ -copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/exhaust.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib -copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__init__.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/io_utils.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib +creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ +copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__pycache__ +copying /build/reproducible-path/dnapi-1.1/.pybuild/cpython3_3.13_dnapilib/build/dnapilib/apred.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib +byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/kmer.py to kmer.cpython-313.pyc -byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/apred.py to apred.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/exhaust.py to exhaust.cpython-313.pyc -byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/io_utils.py to io_utils.cpython-313.pyc +byte-compiling /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/lib/python3.13/dist-packages/dnapilib/apred.py to apred.cpython-313.pyc running install_egg_info running egg_info creating DNApi.egg-info @@ -572,14 +608,14 @@ Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin -copying build/scripts-3.13/qual_trim.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/dnapi.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin -copying build/scripts-3.13/to_fasta.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin copying build/scripts-3.13/qual_offset.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin -changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_trim.py to 755 +copying build/scripts-3.13/qual_trim.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin +copying build/scripts-3.13/to_fasta.py -> /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/dnapi.py to 755 -changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/to_fasta.py to 755 changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_offset.py to 755 +changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/qual_trim.py to 755 +changing mode of /build/reproducible-path/dnapi-1.1/debian/python3-dnapilib/usr/bin/to_fasta.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/dnapi-1.1' dh_install @@ -595,10 +631,10 @@ dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/dnapi-1.1' dh_python3 -O--buildsystem=pybuild -I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_trim.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/dnapi.py -I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_offset.py +I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/qual_trim.py +I: dh_python3 tools:114: replacing shebang in debian/dnapi/usr/bin/to_fasta.py dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild @@ -625,12 +661,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2631896/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/588590 and its subdirectories -I: Current time: Wed Oct 21 05:16:49 -12 2026 -I: pbuilder-time-stamp: 1792603009 +I: removing directory /srv/workspace/pbuilder/2631896 and its subdirectories +I: Current time: Fri Sep 19 00:56:13 +14 2025 +I: pbuilder-time-stamp: 1758192973 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/dnapi_1.1-3.diff: 76.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/dnapi_1.1-3.diff.gz b2/build.log: 80.2% -- replaced with stdout Compressing the 1st log... b1/build.log: 80.8% -- replaced with stdout Thu Sep 18 10:56:14 UTC 2025 I: diffoscope 306 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_dnapi_forky_amd64_1758192974 + touch /var/log/reproducible-builds/diffoscope_stamp_dnapi_forky_amd64_1758192974 + RESULT=0 + systemd-run '--description=diffoscope on dnapi/1.1-3 in forky/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_28-72987 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD --run-session -c jenkins-reproducible-forky-diffoscope-97da17d2-22ac-4f1e-a6bf-52206bb4b034 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dbd-tmp-COb50CJ ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dnapi_1.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dnapi_1.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dnapi_1.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1/dnapi_1.1-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2/dnapi_1.1-3_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_28-72987.service; invocation ID: 9ff2fbf4491a48f1a3820c92fe1d7078 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dnapi_1.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dnapi_1.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/dnapi_1.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b1/dnapi_1.1-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.4MhGt3nD/b2/dnapi_1.1-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 207ms CPU time consumed: 170ms Memory peak: 17.8M (swap: 0B) _ _ __| |_ __ __ _ _ __ (_) / _` | '_ \ / _` | '_ \| | | (_| | | | | (_| | |_) | | \__,_|_| |_|\__,_| .__/|_| |_| Thu Sep 18 10:56:14 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Thu Sep 18 10:56:14 UTC 2025 I: dnapi from forky built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-09-18 10:56:15] INFO: Starting at 2025-09-18 10:56:15.225702 [2025-09-18 10:56:15] INFO: Generating the pages of 1 package(s) [2025-09-18 10:56:15] CRITICAL: https://tests.reproducible-builds.org/debian/forky/amd64/dnapi didn't produce a buildlog, even though it has been built. [2025-09-18 10:56:15] INFO: Finished at 2025-09-18 10:56:15.460224, took: 0:00:00.234525 Thu Sep 18 10:56:15 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/forky/amd64/dnapi.html Thu Sep 18 10:56:15 UTC 2025 I: Removing signed dnapi_1.1-3_amd64.buildinfo.asc files: removed './b1/dnapi_1.1-3_amd64.buildinfo.asc' removed './b2/dnapi_1.1-3_amd64.buildinfo.asc' 1758192975 amd64 forky dnapi Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/dnapi_1.1-3.rbuild.log: 77.2% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/dnapi_1.1-3.rbuild.log.gz [2025-09-18 10:56:15] INFO: Starting at 2025-09-18 10:56:15.776306 [2025-09-18 10:56:15] INFO: Generating the pages of 1 package(s) [2025-09-18 10:56:16] INFO: Finished at 2025-09-18 10:56:16.004801, took: 0:00:00.228499 All cleanup done. Thu Sep 18 10:56:16 UTC 2025 - total duration: 0h 3m 58s. Thu Sep 18 10:56:16 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-wNUmTTvb, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 3min 59.498s CPU time consumed: 3.079s Memory peak: 51.3M (swap: 0B)