Running as unit: rb-build-amd64_3-68874.service; invocation ID: fc5e627a88c54fc3ad0f4055ca0d0c27 ==================================================================================== Wed Sep 17 20:30:29 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_3) on jenkins, called using "ionos1-amd64 ionos15-amd64" as arguments. Wed Sep 17 20:30:29 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-NVzpK54B" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Sep 17 20:30:29 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Wed Sep 17 20:30:29 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-BlOcCI' Wed Sep 17 20:30:29 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Wed Sep 17 20:30:29 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-QJdkID' ok, let's check if soapaligner is building anywhere yet… ok, soapaligner is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of soapaligner in forky on amd64 on jenkins now. 1st build will be done on ionos1-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Wed Sep 17 20:30:47 UTC 2025 I: starting to build soapaligner/forky/amd64 on jenkins on '2025-09-17 20:30' Wed Sep 17 20:30:47 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_3/68874/console.log 1758141047 amd64 forky soapaligner Wed Sep 17 20:30:47 UTC 2025 I: Downloading source for forky/soapaligner=2.20-5 --2025-09-17 20:30:48-- http://deb.debian.org/debian/pool/main/s/soapaligner/soapaligner_2.20-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2039 (2.0K) [text/prs.lines.tag] Saving to: ‘soapaligner_2.20-5.dsc’ 0K . 100% 248M=0s 2025-09-17 20:30:48 (248 MB/s) - ‘soapaligner_2.20-5.dsc’ saved [2039/2039] --2025-09-17 20:30:48-- http://deb.debian.org/debian/pool/main/s/soapaligner/soapaligner_2.20-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2039 (2.0K) [text/prs.lines.tag] Saving to: ‘soapaligner_2.20-5.dsc’ 0K . 100% 248M=0s 2025-09-17 20:30:48 (248 MB/s) - ‘soapaligner_2.20-5.dsc’ saved [2039/2039] Wed Sep 17 20:30:48 UTC 2025 I: soapaligner_2.20-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: soapaligner Binary: soapaligner Architecture: any-amd64 Version: 2.20-5 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://web.archive.org/web/20190127081222/http://soap.genomics.org.cn/soapaligner.html Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/soapaligner Vcs-Git: https://salsa.debian.org/med-team/soapaligner.git Build-Depends: debhelper-compat (= 13) Package-List: soapaligner deb science optional arch=any-amd64,x32 Checksums-Sha1: b99762edeee90352f191511f0d26db32ab9e43d1 110922 soapaligner_2.20.orig.tar.gz 3a8105fb94fe86e89a53059b09ad5f9ecc119022 6408 soapaligner_2.20-5.debian.tar.xz Checksums-Sha256: c5253dddc35e289723f3daada4a3a083111ff6fb9898bc8241dab6f6f972d456 110922 soapaligner_2.20.orig.tar.gz 16c6459f2b63507fd99dfc1e278f0b5bea7092a9934880b88498b8b015fd0ae3 6408 soapaligner_2.20-5.debian.tar.xz Files: ca75753697b12749c42356f366738fef 110922 soapaligner_2.20.orig.tar.gz 94c9ac888c01e1e6c2d7fd85b3850b02 6408 soapaligner_2.20-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmAAOt0UHG5wYXRyYTk3 NEBnbWFpbC5jb20ACgkQALrnSzQzafEVWQ/5ASTl2qFB2ifO3+cEaZaTgyhTU8I3 T1E0DzDC3ix8ZVf2wQcVrHsYzP6A9en4yuWDH4FELvqcjJXRj6IVxbTdF+hG6rH8 rx9K+O5rmmbxkhH4VVElEeSC0Xrzo/vtTajES1NzTr+bqyUxnxIqve8sARQ7cA9J V3mmzqPLreJGrpN2unE4X+dvkt2v7xgMwAPT3otfHYtzngMtE59t+cqeyWic5LAj 2kBhbXTQghfMLvdIeX/MGz36FsKWzGB7bJOVKbTDstgMy5OWRSBfPF4eMOliP8xD nH5xrVfHy9FgEUCBjEkPxcu00GQEUQMtAklI5vzI6xMLRsbg2E+yjwHKQIpuJuMZ rDwe7eMqwiecmvT/lznauKam34meWhrgx3ClKnv9BxOObvlcAWWc5I4qxL8/N09S XuIy7Se2wmiNNxpyTFP6f4NtRrtadZW31Y0bsucZVFkaomN+RaIO8MGldgF2idyp o2QMnI6WAgoUZD90/2zsQj0RrVgBG13FPjRgNGgblzoelCr77gHgcV0i+bdLYm+J zK+UE2Ma76BiFs2idti1zh8hCE5cbr2hYWDSBdaYObN8KZmJE7bBCVH0YxDrASN/ PTANR6FXQ0kqOpWWZ8H45OcEVMu9hhbxUJf2z4xF9LXBEsfvLfv4QXepdL0lnK1b bEp8xTfp9oRghtA= =xZ4B -----END PGP SIGNATURE----- Wed Sep 17 20:30:48 UTC 2025 I: Checking whether the package is not for us Wed Sep 17 20:30:48 UTC 2025 I: Starting 1st build on remote node ionos1-amd64.debian.net. Wed Sep 17 20:30:48 UTC 2025 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Wed Sep 17 20:30:48 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Wed Sep 17 20:30:48 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-e5KEsU' ==================================================================================== Wed Sep 17 20:30:48 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "1 soapaligner forky /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X 2.20-5" as arguments. Wed Sep 17 20:30:48 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-xdMjNna9" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Sep 17 20:30:48 UTC 2025 I: Downloading source for forky/soapaligner=2.20-5 Reading package lists... NOTICE: 'soapaligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/soapaligner.git Please use: git clone https://salsa.debian.org/med-team/soapaligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 119 kB of source archives. Get:1 http://deb.debian.org/debian forky/main soapaligner 2.20-5 (dsc) [2039 B] Get:2 http://deb.debian.org/debian forky/main soapaligner 2.20-5 (tar) [111 kB] Get:3 http://deb.debian.org/debian forky/main soapaligner 2.20-5 (diff) [6408 B] Fetched 119 kB in 0s (2059 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'soapaligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/soapaligner.git Please use: git clone https://salsa.debian.org/med-team/soapaligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 119 kB of source archives. Get:1 http://deb.debian.org/debian forky/main soapaligner 2.20-5 (dsc) [2039 B] Get:2 http://deb.debian.org/debian forky/main soapaligner 2.20-5 (tar) [111 kB] Get:3 http://deb.debian.org/debian forky/main soapaligner 2.20-5 (diff) [6408 B] Fetched 119 kB in 0s (2059 kB/s) Download complete and in download only mode ============================================================================= Building soapaligner in forky on amd64 on ionos1-amd64 now. Date: Wed Sep 17 20:30:48 UTC 2025 Date UTC: Wed Sep 17 20:30:48 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 17 08:30:49 -12 2025 I: pbuilder-time-stamp: 1758141049 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [soapaligner_2.20-5.dsc] I: copying [./soapaligner_2.20.orig.tar.gz] I: copying [./soapaligner_2.20-5.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./soapaligner_2.20-5.dsc: no acceptable signature found dpkg-source: info: extracting soapaligner in soapaligner-2.20 dpkg-source: info: unpacking soapaligner_2.20.orig.tar.gz dpkg-source: info: unpacking soapaligner_2.20-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying compiler_options.patch dpkg-source: info: applying linkerror.patch dpkg-source: info: applying UsageDoublette.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying gcc-10.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1607285/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='ebb7a94bb2274c17bd244a3f2cf4d245' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1607285' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X/pbuilderrc_nHcK --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X/b1 --logfile b1/build.log soapaligner_2.20-5.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1607285/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 11.2 MB of archives. After unpacking 42.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-5 [540 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.26 [939 kB] Fetched 11.2 MB in 4s (2918 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_amd64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_amd64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.1-3_amd64.deb ... Unpacking bsdextrautils (2.41.1-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-1_amd64.deb ... Unpacking m4 (1.4.20-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.26_all.deb ... Unpacking libdebhelper-perl (13.26) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-5_all.deb ... Unpacking libtool (2.5.4-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.193-3_amd64.deb ... Unpacking libelf1t64:amd64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.16-2_amd64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../23-libunistring5_1.3-2_amd64.deb ... Unpacking libunistring5:amd64 (1.3-2) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../24-libxml2-16_2.14.5+dfsg-0.2_amd64.deb ... Unpacking libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2+b1_amd64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.26_all.deb ... Unpacking debhelper (13.26) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up bsdextrautils (2.41.1-3) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:amd64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.26) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.26) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/soapaligner-2.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../soapaligner_2.20-5_source.changes dpkg-buildpackage: info: source package soapaligner dpkg-buildpackage: info: source version 2.20-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j40 clean make[1]: Entering directory '/build/reproducible-path/soapaligner-2.20' rm -f *.o soap make[1]: Leaving directory '/build/reproducible-path/soapaligner-2.20' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/soapaligner.substvars debian/files rm -fr -- debian/soapaligner/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j40 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/soapaligner-2.20' cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" SeqIO.c -o SeqIO.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" MiscUtilities.c -o MiscUtilities.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" MemManager.c -o MemManager.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" TextConverter.c -o TextConverter.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" r250.c -o r250.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" DNACount.c -o DNACount.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" HSP.c -o HSP.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" Timing.c -o Timing.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" BWT.c -o BWT.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" extratools.c -o extratools.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" soapio.c -o soapio.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" BWTAln.c -o BWTAln.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" Match.c -o Match.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" PairMatch.c -o PairMatch.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" stdaln.c -o stdaln.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" kstring.c -o kstring.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" soap.c -o soap.o r250.c:31:21: error: conflicting types for 'randlcg'; have 'unsigned int(int)' 31 | static unsigned int randlcg(int sd) /* returns a random unsigned integer */ | ^~~~~~~ r250.c:19:21: note: previous declaration of 'randlcg' with type 'unsigned int(void)' 19 | static unsigned int randlcg(); | ^~~~~~~ r250.c: In function 'randlcg': r250.c:33:41: warning: overflow in conversion from 'long int' to 'int' changes value from '548781581296767' to '724984959' [-Woverflow] 33 | static int quotient1 = LONG_MAX / 16807L; | ^~~~~~~~ make[1]: *** [Makefile:45: r250.o] Error 1 make[1]: *** Waiting for unfinished jobs.... In file included from extratools.c:1: extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from BWTAln.h:23, from BWTAln.c:1: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from soapio.h:21, from soapio.c:17: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from soap.c:24: Match.h:132:13: warning: inline function 'PickupHit' declared but never defined 132 | inline void PickupHit(ALNSEQ *, const int ,int *, HITTABLE *,const unsigned int *, const unsigned int, unsigned short * ); | ^~~~~~~~~ Match.h:130:12: warning: inline function 'CheckIns' declared but never defined 130 | inline int CheckIns(HITITEM *, HITITEM *, PEAUX *); | ^~~~~~~~ In file included from BWTAln.h:23, from Match.h:23: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from Match.c:17: Match.h:130:12: warning: inline function 'CheckIns' declared but never defined 130 | inline int CheckIns(HITITEM *, HITITEM *, PEAUX *); | ^~~~~~~~ In file included from BWTAln.h:23, from Match.h:23: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from PairMatch.c:19: Match.h:132:13: warning: inline function 'PickupHit' declared but never defined 132 | inline void PickupHit(ALNSEQ *, const int ,int *, HITTABLE *,const unsigned int *, const unsigned int, unsigned short * ); | ^~~~~~~~~ In file included from BWTAln.h:23, from Match.h:23: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ make[1]: Leaving directory '/build/reproducible-path/soapaligner-2.20' dh_auto_build: error: make -j40 "INSTALL=install --strip-program=true" returned exit code 2 make: *** [debian/rules:14: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1607285 and its subdirectories Starting cleanup. All cleanup done. Wed Sep 17 20:36:06 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-xdMjNna9, removing. /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Sep 17 20:36 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 17 20:30 b2 -rw------- 1 jenkins jenkins 3155 Sep 17 20:30 rbuildlog.8vFTQlC -rw-rw-r-- 1 jenkins jenkins 2039 Jan 14 2021 soapaligner_2.20-5.dsc /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X/b1: total 28 -rw-r--r-- 1 jenkins jenkins 27788 Sep 17 20:36 build.log /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X/b2: total 0 Wed Sep 17 20:36:06 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 17 08:30:49 -12 2025 I: pbuilder-time-stamp: 1758141049 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [soapaligner_2.20-5.dsc] I: copying [./soapaligner_2.20.orig.tar.gz] I: copying [./soapaligner_2.20-5.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./soapaligner_2.20-5.dsc: no acceptable signature found dpkg-source: info: extracting soapaligner in soapaligner-2.20 dpkg-source: info: unpacking soapaligner_2.20.orig.tar.gz dpkg-source: info: unpacking soapaligner_2.20-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying compiler_options.patch dpkg-source: info: applying linkerror.patch dpkg-source: info: applying UsageDoublette.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying gcc-10.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1607285/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='ebb7a94bb2274c17bd244a3f2cf4d245' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1607285' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X/pbuilderrc_nHcK --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.67zVi22X/b1 --logfile b1/build.log soapaligner_2.20-5.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1607285/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 11.2 MB of archives. After unpacking 42.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.1-3 [100 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-1 [324 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.26 [91.8 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-5 [540 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 22 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 debhelper all 13.26 [939 kB] Fetched 11.2 MB in 4s (2918 kB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. 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Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_amd64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-1_amd64.deb ... Unpacking m4 (1.4.20-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. 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Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.26) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/soapaligner-2.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../soapaligner_2.20-5_source.changes dpkg-buildpackage: info: source package soapaligner dpkg-buildpackage: info: source version 2.20-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j40 clean make[1]: Entering directory '/build/reproducible-path/soapaligner-2.20' rm -f *.o soap make[1]: Leaving directory '/build/reproducible-path/soapaligner-2.20' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/soapaligner.substvars debian/files rm -fr -- debian/soapaligner/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j40 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/soapaligner-2.20' cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" SeqIO.c -o SeqIO.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" MiscUtilities.c -o MiscUtilities.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" MemManager.c -o MemManager.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" TextConverter.c -o TextConverter.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" r250.c -o r250.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" DNACount.c -o DNACount.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" HSP.c -o HSP.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" Timing.c -o Timing.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" BWT.c -o BWT.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" extratools.c -o extratools.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" soapio.c -o soapio.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" BWTAln.c -o BWTAln.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" Match.c -o Match.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" PairMatch.c -o PairMatch.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" stdaln.c -o stdaln.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" kstring.c -o kstring.o cc -c -flto -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/soapaligner-2.20=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -funroll-loops -maccumulate-outgoing-args -fomit-frame-pointer -DPTHREADS -DMAKE_TIME=\""SOURCE_DATE_EPOCH"\" soap.c -o soap.o r250.c:31:21: error: conflicting types for 'randlcg'; have 'unsigned int(int)' 31 | static unsigned int randlcg(int sd) /* returns a random unsigned integer */ | ^~~~~~~ r250.c:19:21: note: previous declaration of 'randlcg' with type 'unsigned int(void)' 19 | static unsigned int randlcg(); | ^~~~~~~ r250.c: In function 'randlcg': r250.c:33:41: warning: overflow in conversion from 'long int' to 'int' changes value from '548781581296767' to '724984959' [-Woverflow] 33 | static int quotient1 = LONG_MAX / 16807L; | ^~~~~~~~ make[1]: *** [Makefile:45: r250.o] Error 1 make[1]: *** Waiting for unfinished jobs.... In file included from extratools.c:1: extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from BWTAln.h:23, from BWTAln.c:1: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from soapio.h:21, from soapio.c:17: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from soap.c:24: Match.h:132:13: warning: inline function 'PickupHit' declared but never defined 132 | inline void PickupHit(ALNSEQ *, const int ,int *, HITTABLE *,const unsigned int *, const unsigned int, unsigned short * ); | ^~~~~~~~~ Match.h:130:12: warning: inline function 'CheckIns' declared but never defined 130 | inline int CheckIns(HITITEM *, HITITEM *, PEAUX *); | ^~~~~~~~ In file included from BWTAln.h:23, from Match.h:23: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from Match.c:17: Match.h:130:12: warning: inline function 'CheckIns' declared but never defined 130 | inline int CheckIns(HITITEM *, HITITEM *, PEAUX *); | ^~~~~~~~ In file included from BWTAln.h:23, from Match.h:23: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ In file included from PairMatch.c:19: Match.h:132:13: warning: inline function 'PickupHit' declared but never defined 132 | inline void PickupHit(ALNSEQ *, const int ,int *, HITTABLE *,const unsigned int *, const unsigned int, unsigned short * ); | ^~~~~~~~~ In file included from BWTAln.h:23, from Match.h:23: extratools.h:84:12: warning: inline function 'CalMismatch' declared but never defined 84 | inline int CalMismatch(const char *,const unsigned int *,const unsigned int , const unsigned int, const unsigned int); | ^~~~~~~~~~~ extratools.h:83:12: warning: inline function 'altCalMM' declared but never defined 83 | inline int altCalMM(unsigned int x); | ^~~~~~~~ make[1]: Leaving directory '/build/reproducible-path/soapaligner-2.20' dh_auto_build: error: make -j40 "INSTALL=install --strip-program=true" returned exit code 2 make: *** [debian/rules:14: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1607285 and its subdirectories soapaligner failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/soapaligner_2.20-5.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/soapaligner_2.20-5.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/soapaligner_2.20-5.build1.log.gz' Wed Sep 17 20:36:07 UTC 2025 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 79.6% -- replaced with stdout INSERT 0 1 INSERT 0 1 DELETE 1 [2025-09-17 20:36:07] INFO: Starting at 2025-09-17 20:36:07.859707 [2025-09-17 20:36:07] INFO: Generating the pages of 1 package(s) [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] CRITICAL: https://tests.reproducible-builds.org/debian/forky/amd64/soapaligner didn't produce a buildlog, even though it has been built. [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/forky/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] INFO: Finished at 2025-09-17 20:36:08.111028, took: 0:00:00.251324 Wed Sep 17 20:36:08 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/forky/amd64/soapaligner.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/soapaligner_2.20-5.rbuild.log: 76.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/soapaligner_2.20-5.rbuild.log.gz [2025-09-17 20:36:08] INFO: Starting at 2025-09-17 20:36:08.452630 [2025-09-17 20:36:08] INFO: Generating the pages of 1 package(s) [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/forky/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/arm64/soapaligner_2.20-5.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/arm64/soapaligner_2.20-5.diff.gz is missing [2025-09-17 20:36:08] INFO: Finished at 2025-09-17 20:36:08.709631, took: 0:00:00.257007 All cleanup done. Wed Sep 17 20:36:08 UTC 2025 - total duration: 0h 5m 38s. Wed Sep 17 20:36:08 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-NVzpK54B, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 5min 39.408s CPU time consumed: 2.438s Memory peak: 39.9M (swap: 0B)