Running as unit: rb-build-amd64_3-73411.service; invocation ID: c1922ca0f97547ae8fb5f571b79ef3eb ==================================================================================== Fri Oct 31 08:36:17 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_3) on jenkins, called using "ionos1-amd64 ionos15-amd64" as arguments. Fri Oct 31 08:36:17 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-CCPpfEkd" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Oct 31 08:36:17 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Oct 31 08:36:17 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-wcswrE' Fri Oct 31 08:36:17 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Fri Oct 31 08:36:17 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-GXCYc2' ok, let's check if drop-seq is building anywhere yet… ok, drop-seq is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of drop-seq in forky on amd64 on jenkins now. 1st build will be done on ionos1-amd64.debian.net. 2nd build will be done on ionos15-amd64.debian.net. ============================================================================= Fri Oct 31 08:36:31 UTC 2025 I: starting to build drop-seq/forky/amd64 on jenkins on '2025-10-31 08:36' Fri Oct 31 08:36:31 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_3/73411/console.log 1761899791 amd64 forky drop-seq Fri Oct 31 08:36:31 UTC 2025 I: Downloading source for forky/drop-seq=3.0.2+dfsg-2 --2025-10-31 08:36:31-- http://deb.debian.org/debian/pool/main/d/drop-seq/drop-seq_3.0.2%2bdfsg-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2393 (2.3K) [text/prs.lines.tag] Saving to: ‘drop-seq_3.0.2+dfsg-2.dsc’ 0K .. 100% 251M=0s 2025-10-31 08:36:31 (251 MB/s) - ‘drop-seq_3.0.2+dfsg-2.dsc’ saved [2393/2393] --2025-10-31 08:36:31-- http://deb.debian.org/debian/pool/main/d/drop-seq/drop-seq_3.0.2%2bdfsg-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2393 (2.3K) [text/prs.lines.tag] Saving to: ‘drop-seq_3.0.2+dfsg-2.dsc’ 0K .. 100% 251M=0s 2025-10-31 08:36:31 (251 MB/s) - ‘drop-seq_3.0.2+dfsg-2.dsc’ saved [2393/2393] Fri Oct 31 08:36:31 UTC 2025 I: drop-seq_3.0.2+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: drop-seq Binary: drop-seq-tools, drop-seq-testdata Architecture: all Version: 3.0.2+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Pierre Gruet Homepage: https://github.com/broadinstitute/Drop-seq/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/drop-seq Vcs-Git: https://salsa.debian.org/med-team/drop-seq.git Testsuite: autopkgtest Testsuite-Triggers: samtools Build-Depends: debhelper-compat (= 13), javahelper, default-jdk-headless Build-Depends-Indep: libbiojava6-java, libhtsjdk-java, libpicard-java, libcommons-collections4-java, libcommons-lang-java, libguava-java, libyaml-snake-java, libla4j-java, libjcommander-java , junit4 , testng Package-List: drop-seq-testdata deb science optional arch=all drop-seq-tools deb science optional arch=all Checksums-Sha1: 8eec09b7d558d1ffa370f4623d16737df504958e 147637496 drop-seq_3.0.2+dfsg.orig.tar.xz 71aee7cf33aa53de23917ab244d83a6ae50ddc8e 66024 drop-seq_3.0.2+dfsg-2.debian.tar.xz Checksums-Sha256: 5b808861f3e5af6b48de66767e55d28892d85c86d62246cbdc453a3f1d5ea753 147637496 drop-seq_3.0.2+dfsg.orig.tar.xz fe0a92b696aad9429712bf498dceba6db4edf210e3985d2f0fba2dd1039943c9 66024 drop-seq_3.0.2+dfsg-2.debian.tar.xz Files: 3b86a5e3a9a863712fe3cbe523331949 147637496 drop-seq_3.0.2+dfsg.orig.tar.xz a4e2761c2cbc174f30435ee023e0259a 66024 drop-seq_3.0.2+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEM8soQxPpC9J9y0UjYAMWptwndHYFAmjejf4ACgkQYAMWptwn dHaJAA/+PDCAqrGnTITSHJwgcRISP3wLLfOwiRHUL5uu48DD1V9reWc3EY4nsy/J gEHkkTAyCPrk5QPnh56dFm+VM0V3Z5dIOdRIz3ZNiolwLsjdsKOqS5XK1zBON2AI w9TBSYJm3iJx1yLrpiS7Z3KvjMO/tY2CSfKobyQK38ckgWaHNSDwbFROR7HPAkX0 hQvQOrjRPfMmaxKqn421CKMyue6/cI0tDV1w0PYgrFUDcoB58BHzaCVmArI678Zg OiNIAKwo4Un6D2nRod612Ul5xL0VWq9ZDD7zi3Gnjlhw+juq3yubBKQ2nCqgHm+2 bxI9zBr6uiCNLyfA+Cy6txAg6YRuCwtp31kF5Jc86Itf5DJVZObhzFWmprK888Nf x0rUAYF/MWWm8tljvJYBZWQnJYdTeJCwuj7/XzCq2Pti6UICx2tB0KJi2/8rUTT8 4Zpco1mhG9sfsWgefAWR+/K1Z/g7mzrzJIZgUwYpd661NjIy2qEJf1iruFX1bpPb h4OfhDpE4yJ422Rw5RrEKNNhpTwAUYf74NlDQI9xj4lXx0fGz6DOJfh7GiiI2IiL mFZgx4AKjEmSyW1QfRw0f2dU8bts4xpLfh3BLmEoV1gF2lqyHTGO/48IT40285YT L4BKsY9j/OzKNAOU/uIYsHQBo36VMUbjQwHmHib29/R/GToRZv4= =kYGL -----END PGP SIGNATURE----- Fri Oct 31 08:36:31 UTC 2025 I: Checking whether the package is not for us Fri Oct 31 08:36:31 UTC 2025 I: Starting 1st build on remote node ionos1-amd64.debian.net. Fri Oct 31 08:36:31 UTC 2025 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Fri Oct 31 08:36:31 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos1-amd64.debian.net is marked as down. Fri Oct 31 08:36:31 UTC 2025 - checking via ssh if ionos1-amd64.debian.net is up. removed '/tmp/read-only-fs-test-ma3yxj' ==================================================================================== Fri Oct 31 08:36:32 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos1-amd64, called using "1 drop-seq forky /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC 3.0.2+dfsg-2" as arguments. Fri Oct 31 08:36:32 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-Hnf9os6N" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Oct 31 08:36:32 UTC 2025 I: Downloading source for forky/drop-seq=3.0.2+dfsg-2 Reading package lists... NOTICE: 'drop-seq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/drop-seq.git Please use: git clone https://salsa.debian.org/med-team/drop-seq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 148 MB of source archives. Get:1 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (dsc) [2393 B] Get:2 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (tar) [148 MB] Get:3 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (diff) [66.0 kB] Fetched 148 MB in 2s (91.0 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'drop-seq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/drop-seq.git Please use: git clone https://salsa.debian.org/med-team/drop-seq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 148 MB of source archives. Get:1 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (dsc) [2393 B] Get:2 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (tar) [148 MB] Get:3 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (diff) [66.0 kB] Fetched 148 MB in 2s (91.0 MB/s) Download complete and in download only mode ============================================================================= Building drop-seq in forky on amd64 on ionos1-amd64 now. Date: Fri Oct 31 08:36:33 UTC 2025 Date UTC: Fri Oct 31 08:36:33 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 30 20:36:34 -12 2025 I: pbuilder-time-stamp: 1761899794 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [drop-seq_3.0.2+dfsg-2.dsc] I: copying [./drop-seq_3.0.2+dfsg.orig.tar.xz] I: copying [./drop-seq_3.0.2+dfsg-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./drop-seq_3.0.2+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting drop-seq in drop-seq-3.0.2+dfsg dpkg-source: info: unpacking drop-seq_3.0.2+dfsg.orig.tar.xz dpkg-source: info: unpacking drop-seq_3.0.2+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_git.patch dpkg-source: info: applying debian_packaged_libs.patch dpkg-source: info: applying link_excluded_file.patch dpkg-source: info: applying paths_in_scripts.patch dpkg-source: info: applying no_google_api_gax.patch dpkg-source: info: applying openjdk_21_syntax.patch dpkg-source: info: applying put_defs_sh_out_of_path.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2102242/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='35adbac08202471aa61222dfab945f14' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2102242' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_k9Pk --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1 --logfile b1/build.log drop-seq_3.0.2+dfsg-2.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2102242/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), javahelper, default-jdk-headless, libbiojava6-java, libhtsjdk-java, libpicard-java, libcommons-collections4-java, libcommons-lang-java, libguava-java, libyaml-snake-java, libla4j-java, libjcommander-java, junit4, testng dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on javahelper; however: Package javahelper is not installed. pbuilder-satisfydepends-dummy depends on default-jdk-headless; however: Package default-jdk-headless is not installed. pbuilder-satisfydepends-dummy depends on libbiojava6-java; however: Package libbiojava6-java is not installed. pbuilder-satisfydepends-dummy depends on libhtsjdk-java; however: Package libhtsjdk-java is not installed. pbuilder-satisfydepends-dummy depends on libpicard-java; however: Package libpicard-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-collections4-java; however: Package libcommons-collections4-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-lang-java; however: Package libcommons-lang-java is not installed. pbuilder-satisfydepends-dummy depends on libguava-java; however: Package libguava-java is not installed. pbuilder-satisfydepends-dummy depends on libyaml-snake-java; however: Package libyaml-snake-java is not installed. pbuilder-satisfydepends-dummy depends on libla4j-java; however: Package libla4j-java is not installed. pbuilder-satisfydepends-dummy depends on libjcommander-java; however: Package libjcommander-java is not installed. pbuilder-satisfydepends-dummy depends on junit4; however: Package junit4 is not installed. pbuilder-satisfydepends-dummy depends on testng; however: Package testng is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: ant{a} ant-optional{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} fastjar{a} file{a} gettext{a} gettext-base{a} gpg{a} gpg-agent{a} gpgconf{a} groff-base{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} junit4{a} libactivation-java{a} libantlr4-runtime-java{a} libaopalliance-java{a} libapache-pom-java{a} libapfloat-java{a} libarchive-zip-perl{a} libargs4j-java{a} libasm-java{a} libassuan9{a} libatinject-jsr330-api-java{a} libb-hooks-op-check-perl{a} libbarclay-java{a} libbiojava6-java{a} libbsh-java{a} libcdi-api-java{a} libciftools-java{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcodemodel-java{a} libcommons-beanutils-java{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-collections3-java{a} libcommons-collections4-java{a} libcommons-compress-java{a} libcommons-exec-java{a} libcommons-io-java{a} libcommons-jexl2-java{a} libcommons-lang-java{a} libcommons-lang3-java{a} libcommons-logging-java{a} libcommons-math-java{a} libcommons-math3-java{a} libcommons-parent-java{a} libcommons-text-java{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdom4j-java{a} libdtd-parser-java{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} liberror-prone-java{a} libexec-maven-plugin-java{a} libexpat1{a} libezmorph-java{a} libfastinfoset-java{a} libfastutil-java{a} libffi8{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfreemarker-java{a} libgatk-native-bindings-java{a} libgcrypt20{a} libgeronimo-annotation-1.3-spec-java{a} libgeronimo-interceptor-3.0-spec-java{a} libgkl-java{a} libgoogle-gson-java{a} libgpg-error0{a} libguava-java{a} libguice-java{a} libhamcrest-java{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhtsjdk-java{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhttpclient-java{a} libhttpcore-java{a} libimport-into-perl{a} libinchi1.07{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libistack-commons-java{a} libitext5-java{a} libjackson2-annotations-java{a} libjackson2-core-java{a} libjackson2-databind-java{a} libjaxb-api-java{a} libjaxb-java{a} libjaxen-java{a} libjcommander-java{a} libjgrapht-java{a} libjgraphx-java{a} libjheaps-java{a} libjmol-java{a} libjni-inchi-java{a} libjni-inchi-jni{a} libjoptsimple-java{a} libjpeg62-turbo{a} libjson-java{a} libjson-simple-java{a} libjsoup-java{a} libjsr305-java{a} libksba8{a} libla4j-java{a} liblcms2-2{a} liblightcouch-java{a} liblog4j1.2-java{a} liblog4j2-java{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmaven-archiver-java{a} libmaven-compiler-plugin-java{a} libmaven-file-management-java{a} libmaven-jar-plugin-java{a} libmaven-parent-java{a} libmaven-resolver-java{a} libmaven-shared-incremental-java{a} libmaven-shared-io-java{a} libmaven-shared-utils-java{a} libmaven3-core-java{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmmtf-java{a} libmodule-runtime-perl{a} libmongodb-java{a} libmoo-perl{a} libmsgpack-java{a} libnaga-java{a} libncbi-ngs3{a} libncbi-vdb3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libngs-java{a} libngs-jni{a} libnpth0t64{a} libnspr4{a} libnss3{a} libparams-classify-perl{a} libpcsclite1{a} libpicard-java{a} libpipeline1{a} libplexus-archiver-java{a} libplexus-cipher-java{a} libplexus-classworlds-java{a} libplexus-compiler-java{a} libplexus-component-annotations-java{a} libplexus-container-default-java{a} libplexus-interpolation-java{a} libplexus-io-java{a} libplexus-languages-java{a} libplexus-sec-dispatcher-java{a} libplexus-utils2-java{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqdox2-java{a} libreadline8t64{a} librelaxng-datatype-java{a} librhino-java{a} librngom-java{a} librole-tiny-perl{a} libsisu-inject-java{a} libsisu-plexus-java{a} libslf4j-java{a} libsnappy-java{a} libsnappy-jni{a} libsnappy1v5{a} libstax-ex-java{a} libstreambuffer-java{a} libsub-quote-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libtxw2-java{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvecmath-java{a} libwagon-http-java{a} libwagon-provider-api-java{a} libwww-perl{a} libwww-robotrules-perl{a} libxbean-reflect-java{a} libxerces2-java{a} libxml-commons-external-java{a} libxml-commons-resolver1.1-java{a} libxml2-16{a} libxom-java{a} libxsom-java{a} libxz-java{a} libyaml-snake-java{a} m4{a} man-db{a} media-types{a} ncbi-vdb-data{a} netbase{a} openjdk-21-jdk-headless{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} python3{a} python3-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} rsopv{a} sensible-utils{a} testng{a} tzdata{a} wdiff{a} The following packages are RECOMMENDED but will NOT be installed: curl debian-keyring debian-tag2upload-keyring dput dput-ng dupload equivs git-debpush gnupg libarchive-cpio-perl libasound2t64 libcups2t64 libdata-dump-perl libdistro-info-perl libfontconfig1 libfreetype6 libgitlab-api-v4-perl libgkl-jni libgpg-error-l10n libharfbuzz0b libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjansi-java libjson-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmetacpan-client-perl libnamespace-clean-perl liboss4-salsa-asound2 libsoap-lite-perl libstring-shellquote-perl libxstring-perl licensecheck lintian lynx lzip pristine-tar python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg r-base-core strace unzip wget 0 packages upgraded, 248 newly installed, 0 to remove and 0 not upgraded. Need to get 246 MB of archives. After unpacking 516 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.9-1 [865 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.9-1 [2257 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 media-types all 14.0.0 [30.8 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.9-1 [1965 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.9-1 [764 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 openssl amd64 3.5.4-1 [1496 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 ca-certificates all 20250419 [162 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 java-common all 0.76 [6776 B] Get: 30 http://deb.debian.org/debian forky/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libnspr4 amd64 2:4.37-1 [111 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libnss3 amd64 2:3.117-1 [1429 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libpcsclite1 amd64 2.4.0-1 [55.7 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 openjdk-21-jre-headless amd64 21.0.9+10-1 [41.9 MB] Get: 36 http://deb.debian.org/debian forky/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get: 37 http://deb.debian.org/debian forky/main amd64 ant all 1.10.15-1 [2163 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 ant-optional all 1.10.15-1 [456 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 46 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 51 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 57 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 58 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Get: 59 http://deb.debian.org/debian forky/main amd64 openjdk-21-jdk-headless amd64 21.0.9+10-1 [83.0 MB] Get: 60 http://deb.debian.org/debian forky/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get: 61 http://deb.debian.org/debian forky/main amd64 libgpg-error0 amd64 1.56-2 [89.1 kB] Get: 62 http://deb.debian.org/debian forky/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB] Get: 63 http://deb.debian.org/debian forky/main amd64 libgcrypt20 amd64 1.11.2-2 [865 kB] Get: 64 http://deb.debian.org/debian forky/main amd64 gpgconf amd64 2.4.8-4 [129 kB] Get: 65 http://deb.debian.org/debian forky/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get: 66 http://deb.debian.org/debian forky/main amd64 libnpth0t64 amd64 1.8-3 [23.2 kB] Get: 67 http://deb.debian.org/debian forky/main amd64 gpg amd64 2.4.8-4 [639 kB] Get: 68 http://deb.debian.org/debian forky/main amd64 pinentry-curses amd64 1.3.2-3 [87.8 kB] Get: 69 http://deb.debian.org/debian forky/main amd64 gpg-agent amd64 2.4.8-4 [273 kB] Get: 70 http://deb.debian.org/debian forky/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B] Get: 71 http://deb.debian.org/debian forky/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 72 http://deb.debian.org/debian forky/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 73 http://deb.debian.org/debian forky/main amd64 libfile-touch-perl all 0.12-2 [8816 B] Get: 74 http://deb.debian.org/debian forky/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 75 http://deb.debian.org/debian forky/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get: 76 http://deb.debian.org/debian forky/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB] Get: 77 http://deb.debian.org/debian forky/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get: 78 http://deb.debian.org/debian forky/main amd64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get: 79 http://deb.debian.org/debian forky/main amd64 libdevel-callchecker-perl amd64 0.009-2 [15.6 kB] Get: 80 http://deb.debian.org/debian forky/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get: 81 http://deb.debian.org/debian forky/main amd64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get: 82 http://deb.debian.org/debian forky/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get: 83 http://deb.debian.org/debian forky/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 84 http://deb.debian.org/debian forky/main amd64 libsub-quote-perl all 2.006009-1 [21.3 kB] Get: 85 http://deb.debian.org/debian forky/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get: 86 http://deb.debian.org/debian forky/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 87 http://deb.debian.org/debian forky/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 88 http://deb.debian.org/debian forky/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 89 http://deb.debian.org/debian forky/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 90 http://deb.debian.org/debian forky/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 91 http://deb.debian.org/debian forky/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 92 http://deb.debian.org/debian forky/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get: 93 http://deb.debian.org/debian forky/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 94 http://deb.debian.org/debian forky/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 95 http://deb.debian.org/debian forky/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 96 http://deb.debian.org/debian forky/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 97 http://deb.debian.org/debian forky/main amd64 libhttp-message-perl all 7.01-1 [80.0 kB] Get: 98 http://deb.debian.org/debian forky/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 99 http://deb.debian.org/debian forky/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 100 http://deb.debian.org/debian forky/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 101 http://deb.debian.org/debian forky/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB] Get: 102 http://deb.debian.org/debian forky/main amd64 libio-socket-ssl-perl all 2.095-1 [226 kB] Get: 103 http://deb.debian.org/debian forky/main amd64 libnet-http-perl all 6.24-1 [23.2 kB] Get: 104 http://deb.debian.org/debian forky/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 105 http://deb.debian.org/debian forky/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 106 http://deb.debian.org/debian forky/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 107 http://deb.debian.org/debian forky/main amd64 libwww-perl all 6.81-1 [186 kB] Get: 108 http://deb.debian.org/debian forky/main amd64 patchutils amd64 0.4.3-1 [79.1 kB] Get: 109 http://deb.debian.org/debian forky/main amd64 rsopv amd64 0.6.4-1 [1385 kB] Get: 110 http://deb.debian.org/debian forky/main amd64 wdiff amd64 1.2.2-9 [122 kB] Get: 111 http://deb.debian.org/debian forky/main amd64 devscripts all 2.25.22 [1046 kB] Get: 112 http://deb.debian.org/debian forky/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get: 113 http://deb.debian.org/debian forky/main amd64 jarwrapper all 0.81 [9784 B] Get: 114 http://deb.debian.org/debian forky/main amd64 javahelper all 0.81 [79.4 kB] Get: 115 http://deb.debian.org/debian forky/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get: 116 http://deb.debian.org/debian forky/main amd64 junit4 all 4.13.2-5 [350 kB] Get: 117 http://deb.debian.org/debian forky/main amd64 libactivation-java all 1.2.0-2 [84.7 kB] Get: 118 http://deb.debian.org/debian forky/main amd64 libantlr4-runtime-java all 4.9.2-3 [318 kB] Get: 119 http://deb.debian.org/debian forky/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get: 120 http://deb.debian.org/debian forky/main amd64 libapache-pom-java all 33-2 [5852 B] Get: 121 http://deb.debian.org/debian forky/main amd64 libapfloat-java all 1.14.0-2 [725 kB] Get: 122 http://deb.debian.org/debian forky/main amd64 libargs4j-java all 2.33-2 [138 kB] Get: 123 http://deb.debian.org/debian forky/main amd64 libasm-java all 9.8-2 [391 kB] Get: 124 http://deb.debian.org/debian forky/main amd64 libatinject-jsr330-api-java all 1.0+ds1-6 [5112 B] Get: 125 http://deb.debian.org/debian forky/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get: 126 http://deb.debian.org/debian forky/main amd64 libcommons-lang3-java all 3.17.0-2 [641 kB] Get: 127 http://deb.debian.org/debian forky/main amd64 libfreemarker-java all 2.3.32-2.1 [1525 kB] Get: 128 http://deb.debian.org/debian forky/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get: 129 http://deb.debian.org/debian forky/main amd64 libjoptsimple-java all 5.0.4-7 [73.7 kB] Get: 130 http://deb.debian.org/debian forky/main amd64 libcommons-codec-java all 1.18.0-1 [304 kB] Get: 131 http://deb.debian.org/debian forky/main amd64 libcommons-logging-java all 1.3.0-2 [68.6 kB] Get: 132 http://deb.debian.org/debian forky/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get: 133 http://deb.debian.org/debian forky/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get: 134 http://deb.debian.org/debian forky/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get: 135 http://deb.debian.org/debian forky/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get: 136 http://deb.debian.org/debian forky/main amd64 libslf4j-java all 1.7.32-2 [142 kB] Get: 137 http://deb.debian.org/debian forky/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get: 138 http://deb.debian.org/debian forky/main amd64 libbarclay-java all 6.0.0+dfsg-1 [110 kB] Get: 139 http://deb.debian.org/debian forky/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get: 140 http://deb.debian.org/debian forky/main amd64 libciftools-java all 7.0.1-1 [2228 kB] Get: 141 http://deb.debian.org/debian forky/main amd64 libcommons-math-java all 2.2-9 [933 kB] Get: 142 http://deb.debian.org/debian forky/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get: 143 http://deb.debian.org/debian forky/main amd64 libjsr305-java all 0.1~+svn49-12 [26.6 kB] Get: 144 http://deb.debian.org/debian forky/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get: 145 http://deb.debian.org/debian forky/main amd64 libitext5-java all 5.5.13.3-4 [2667 kB] Get: 146 http://deb.debian.org/debian forky/main amd64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB] Get: 147 http://deb.debian.org/debian forky/main amd64 libjackson2-core-java all 2.14.1-1 [447 kB] Get: 148 http://deb.debian.org/debian forky/main amd64 libjackson2-databind-java all 2.14.0+ds-1 [1532 kB] Get: 149 http://deb.debian.org/debian forky/main amd64 libjaxb-api-java all 2.3.1-1 [119 kB] Get: 150 http://deb.debian.org/debian forky/main amd64 libjaxen-java all 1.2.0-1 [214 kB] Get: 151 http://deb.debian.org/debian forky/main amd64 libdom4j-java all 2.1.4-1 [312 kB] Get: 152 http://deb.debian.org/debian forky/main amd64 libcommons-io-java all 2.19.0-1 [524 kB] Get: 153 http://deb.debian.org/debian forky/main amd64 libmaven-shared-utils-java all 3.4.2-1 [137 kB] Get: 154 http://deb.debian.org/debian forky/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get: 155 http://deb.debian.org/debian forky/main amd64 libguice-java all 5.1.0-1 [932 kB] Get: 156 http://deb.debian.org/debian forky/main amd64 libmaven-parent-java all 43-2 [6252 B] Get: 157 http://deb.debian.org/debian forky/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get: 158 http://deb.debian.org/debian forky/main amd64 libwagon-provider-api-java all 3.5.3-2 [48.3 kB] Get: 159 http://deb.debian.org/debian forky/main amd64 libmaven-resolver-java all 1.9.22-1 [729 kB] Get: 160 http://deb.debian.org/debian forky/main amd64 libplexus-cipher-java all 2.0-1 [14.9 kB] Get: 161 http://deb.debian.org/debian forky/main amd64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB] Get: 162 http://deb.debian.org/debian forky/main amd64 libplexus-component-annotations-java all 2.1.1-1 [7660 B] Get: 163 http://deb.debian.org/debian forky/main amd64 libplexus-interpolation-java all 1.27-1 [76.8 kB] Get: 164 http://deb.debian.org/debian forky/main amd64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB] Get: 165 http://deb.debian.org/debian forky/main amd64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-5 [8444 B] Get: 166 http://deb.debian.org/debian forky/main amd64 libcdi-api-java all 1.2-4 [55.3 kB] Get: 167 http://deb.debian.org/debian forky/main amd64 libsisu-inject-java all 0.3.5-1 [352 kB] Get: 168 http://deb.debian.org/debian forky/main amd64 libsisu-plexus-java all 0.3.5-1 [183 kB] Get: 169 http://deb.debian.org/debian forky/main amd64 libmaven3-core-java all 3.9.9-1 [1661 kB] Get: 170 http://deb.debian.org/debian forky/main amd64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB] Get: 171 http://deb.debian.org/debian forky/main amd64 libmaven-file-management-java all 3.0.0-2 [35.1 kB] Get: 172 http://deb.debian.org/debian forky/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get: 173 http://deb.debian.org/debian forky/main amd64 libplexus-io-java all 3.3.1-2 [65.3 kB] Get: 174 http://deb.debian.org/debian forky/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.7 kB] Get: 175 http://deb.debian.org/debian forky/main amd64 libsnappy-jni amd64 1.1.10.8-1 [6548 B] Get: 176 http://deb.debian.org/debian forky/main amd64 libsnappy-java all 1.1.10.8-1 [87.8 kB] Get: 177 http://deb.debian.org/debian forky/main amd64 libxz-java all 1.9-1 [143 kB] Get: 178 http://deb.debian.org/debian forky/main amd64 libplexus-archiver-java all 4.6.1-1 [187 kB] Get: 179 http://deb.debian.org/debian forky/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get: 180 http://deb.debian.org/debian forky/main amd64 libwagon-http-java all 3.5.3-2 [49.6 kB] Get: 181 http://deb.debian.org/debian forky/main amd64 libistack-commons-java all 3.0.6-5 [145 kB] Get: 182 http://deb.debian.org/debian forky/main amd64 libcodemodel-java all 2.6+jaxb2.3.0.1-11 [164 kB] Get: 183 http://deb.debian.org/debian forky/main amd64 librelaxng-datatype-java all 1.0+ds1-4 [11.8 kB] Get: 184 http://deb.debian.org/debian forky/main amd64 librngom-java all 2.3.0.1-11 [292 kB] Get: 185 http://deb.debian.org/debian forky/main amd64 libxsom-java all 2.3.0.1-11 [401 kB] Get: 186 http://deb.debian.org/debian forky/main amd64 libtxw2-java all 2.3.0.1-11 [134 kB] Get: 187 http://deb.debian.org/debian forky/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get: 188 http://deb.debian.org/debian forky/main amd64 libdtd-parser-java all 1.2-1 [64.9 kB] Get: 189 http://deb.debian.org/debian forky/main amd64 libstax-ex-java all 1.7.8-3 [40.9 kB] Get: 190 http://deb.debian.org/debian forky/main amd64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] Get: 191 http://deb.debian.org/debian forky/main amd64 libfastinfoset-java all 1.2.12-4 [347 kB] Get: 192 http://deb.debian.org/debian forky/main amd64 libjaxb-java all 2.3.0.1-11 [1980 kB] Get: 193 http://deb.debian.org/debian forky/main amd64 libmaven-archiver-java all 3.6.2-1 [26.1 kB] Get: 194 http://deb.debian.org/debian forky/main amd64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB] Get: 195 http://deb.debian.org/debian forky/main amd64 libcommons-text-java all 1.13.1-1 [228 kB] Get: 196 http://deb.debian.org/debian forky/main amd64 libfastutil-java all 8.5.16+dfsg-1 [20.2 MB] Get: 197 http://deb.debian.org/debian forky/main amd64 libjheaps-java all 0.14-3 [146 kB] Get: 198 http://deb.debian.org/debian forky/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get: 199 http://deb.debian.org/debian forky/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get: 200 http://deb.debian.org/debian forky/main amd64 libjgraphx-java all 2.1.0.7-6 [577 kB] Get: 201 http://deb.debian.org/debian forky/main amd64 libjgrapht-java all 1.5.2-2 [1616 kB] Get: 202 http://deb.debian.org/debian forky/main amd64 libinchi1.07 amd64 1.07.3+dfsg-1 [557 kB] Get: 203 http://deb.debian.org/debian forky/main amd64 libjni-inchi-jni amd64 0.8+dfsg-8 [9188 B] Get: 204 http://deb.debian.org/debian forky/main amd64 libcommons-exec-java all 1.3-3 [48.4 kB] Get: 205 http://deb.debian.org/debian forky/main amd64 libexec-maven-plugin-java all 3.1.0-2 [66.7 kB] Get: 206 http://deb.debian.org/debian forky/main amd64 libmaven-shared-incremental-java all 1.1-6 [9916 B] Get: 207 http://deb.debian.org/debian forky/main amd64 libcommons-lang-java all 2.6-12 [273 kB] Get: 208 http://deb.debian.org/debian forky/main amd64 libxbean-reflect-java all 4.5-9 [132 kB] Get: 209 http://deb.debian.org/debian forky/main amd64 libplexus-container-default-java all 2.1.1-1 [193 kB] Get: 210 http://deb.debian.org/debian forky/main amd64 libplexus-compiler-java all 2.13.0-1 [99.5 kB] Get: 211 http://deb.debian.org/debian forky/main amd64 libqdox2-java all 2.0.3-1 [296 kB] Get: 212 http://deb.debian.org/debian forky/main amd64 libplexus-languages-java all 1.1.1-3 [47.8 kB] Get: 213 http://deb.debian.org/debian forky/main amd64 libmaven-compiler-plugin-java all 3.13.0-1 [78.8 kB] Get: 214 http://deb.debian.org/debian forky/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get: 215 http://deb.debian.org/debian forky/main amd64 libjni-inchi-java all 0.8+dfsg-8 [33.6 kB] Get: 216 http://deb.debian.org/debian forky/main amd64 libnaga-java all 3.0+svn80-5 [43.5 kB] Get: 217 http://deb.debian.org/debian forky/main amd64 libjmol-java all 16.2.33+dfsg-1 [10.4 MB] Get: 218 http://deb.debian.org/debian forky/main amd64 libjson-simple-java all 2.3.0-2 [61.7 kB] Get: 219 http://deb.debian.org/debian forky/main amd64 libmsgpack-java all 0.9.6-1 [161 kB] Get: 220 http://deb.debian.org/debian forky/main amd64 libmmtf-java all 1.0.11-1 [187 kB] Get: 221 http://deb.debian.org/debian forky/main amd64 libvecmath-java all 1.5.2-7 [97.0 kB] Get: 222 http://deb.debian.org/debian forky/main amd64 libbiojava6-java all 6.1.0+dfsg-6 [5359 kB] Get: 223 http://deb.debian.org/debian forky/main amd64 libbsh-java all 2.0b4-20 [291 kB] Get: 224 http://deb.debian.org/debian forky/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get: 225 http://deb.debian.org/debian forky/main amd64 libcommons-beanutils-java all 1.10.1-1.1 [231 kB] Get: 226 http://deb.debian.org/debian forky/main amd64 libcommons-collections4-java all 4.4-2 [682 kB] Get: 227 http://deb.debian.org/debian forky/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get: 228 http://deb.debian.org/debian forky/main amd64 libcommons-math3-java all 3.6.1-4 [2040 kB] Get: 229 http://deb.debian.org/debian forky/main amd64 libezmorph-java all 1.0.6-4 [75.9 kB] Get: 230 http://deb.debian.org/debian forky/main amd64 libgatk-native-bindings-java all 1.1.0+dfsg-1 [11.3 kB] Get: 231 http://deb.debian.org/debian forky/main amd64 libxom-java all 1.3.9-1 [174 kB] Get: 232 http://deb.debian.org/debian forky/main amd64 libjson-java all 3.2.0+dfsg-2 [142 kB] Get: 233 http://deb.debian.org/debian forky/main amd64 libmbedcrypto16 amd64 3.6.4-2 [360 kB] Get: 234 http://deb.debian.org/debian forky/main amd64 libmbedx509-7 amd64 3.6.4-2 [151 kB] Get: 235 http://deb.debian.org/debian forky/main amd64 libmbedtls21 amd64 3.6.4-2 [242 kB] Get: 236 http://deb.debian.org/debian forky/main amd64 ncbi-vdb-data all 3.2.1+dfsg-2 [88.5 kB] Get: 237 http://deb.debian.org/debian forky/main amd64 libncbi-vdb3 amd64 3.2.1+dfsg-2 [1164 kB] Get: 238 http://deb.debian.org/debian forky/main amd64 libncbi-ngs3 amd64 3.2.1+dfsg-5 [159 kB] Get: 239 http://deb.debian.org/debian forky/main amd64 libngs-jni amd64 3.2.1+dfsg-5 [27.8 kB] Get: 240 http://deb.debian.org/debian forky/main amd64 libngs-java amd64 3.2.1+dfsg-5 [114 kB] Get: 241 http://deb.debian.org/debian forky/main amd64 librhino-java all 1.7.15-1 [1382 kB] Get: 242 http://deb.debian.org/debian forky/main amd64 libhtsjdk-java all 4.1.3+dfsg-2 [1841 kB] Get: 243 http://deb.debian.org/debian forky/main amd64 libgkl-java all 0.9.1+dfsg-2 [28.2 kB] Get: 244 http://deb.debian.org/debian forky/main amd64 libjcommander-java all 1.71-4 [73.0 kB] Get: 245 http://deb.debian.org/debian forky/main amd64 libla4j-java all 0.6.0-4 [228 kB] Get: 246 http://deb.debian.org/debian forky/main amd64 libpicard-java all 3.3.0+dfsg-2 [1778 kB] Get: 247 http://deb.debian.org/debian forky/main amd64 libyaml-snake-java all 2.0+ds+really1.33-1 [324 kB] Get: 248 http://deb.debian.org/debian forky/main amd64 testng all 6.9.12-4 [795 kB] Fetched 246 MB in 11s (21.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package binfmt-support. Preparing to unpack .../binfmt-support_2.2.2-7_amd64.deb ... Unpacking binfmt-support (2.2.2-7) ... Selecting previously unselected package libexpat1:amd64. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.9-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.9-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.9-1_amd64.deb ... Unpacking python3.13 (3.13.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Unpacking openjdk-21-jdk-headless:amd64 (21.0.9+10-1) ... Selecting previously unselected package default-jdk-headless. Preparing to unpack .../044-default-jdk-headless_2%3a1.21-76_amd64.deb ... Unpacking default-jdk-headless (2:1.21-76) ... Selecting previously unselected package libgpg-error0:amd64. Preparing to unpack .../045-libgpg-error0_1.56-2_amd64.deb ... Unpacking libgpg-error0:amd64 (1.56-2) ... Selecting previously unselected package libassuan9:amd64. Preparing to unpack .../046-libassuan9_3.0.2-2_amd64.deb ... Unpacking libassuan9:amd64 (3.0.2-2) ... Selecting previously unselected package libgcrypt20:amd64. Preparing to unpack .../047-libgcrypt20_1.11.2-2_amd64.deb ... Unpacking libgcrypt20:amd64 (1.11.2-2) ... Selecting previously unselected package gpgconf. Preparing to unpack .../048-gpgconf_2.4.8-4_amd64.deb ... Unpacking gpgconf (2.4.8-4) ... Selecting previously unselected package libksba8:amd64. Preparing to unpack .../049-libksba8_1.6.7-2+b1_amd64.deb ... 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Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Oct 31 08:38:38 UTC 2025. Universal Time is now: Fri Oct 31 08:38:38 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... Setting up libgeronimo-interceptor-3.0-spec-java (1.0.1-5) ... Setting up libcommons-collections3-java (3.2.2-3) ... Setting up libio-string-perl (1.08-4) ... Setting up librhino-java (1.7.15-1) ... Setting up autotools-dev (20240727.1) ... Setting up rsopv (0.6.4-1) ... update-alternatives: using /usr/bin/rsopv to provide /usr/bin/sopv (sopv) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... Setting up libjaxen-java (1.2.0-1) ... Setting up libnspr4:amd64 (2:4.37-1) ... Setting up libapache-pom-java (33-2) ... Setting up libatinject-jsr330-api-java (1.0+ds1-6) ... Setting up libplexus-interpolation-java (1.27-1) ... Setting up libunistring5:amd64 (1.3-2) ... 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Setting up libtool (2.5.4-7) ... Setting up libstax-ex-java (1.7.8-3) ... Setting up libmaven-parent-java (43-2) ... Setting up libcommons-parent-java (56-1) ... Setting up libcommons-logging-java (1.3.0-2) ... Setting up libnet-http-perl (6.24-1) ... Setting up libsisu-inject-java (0.3.5-1) ... Setting up libnss3:amd64 (2:3.117-1) ... Setting up libciftools-java (7.0.1-1) ... Setting up libxom-java (1.3.9-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-2) ... Setting up libcommons-lang-java (2.6-12) ... Setting up libjackson2-databind-java (2.14.0+ds-1) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up patchutils (0.4.3-1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libsisu-plexus-java (0.3.5-1) ... Setting up libmbedx509-7:amd64 (3.6.4-2) ... Setting up testng (6.9.12-4) ... Setting up libstreambuffer-java (1.5.4-1.1) ... Setting up libcommons-collections4-java (4.4-2) ... Setting up libcommons-lang3-java (3.17.0-2) ... Setting up libmbedtls21:amd64 (3.6.4-2) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up librngom-java (2.3.0.1-11) ... Setting up libjni-inchi-jni (0.8+dfsg-8) ... Setting up libjgraphx-java (2.1.0.7-6) ... Setting up groff-base (1.23.0-9) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ... Setting up gpgconf (2.4.8-4) ... Setting up libcommons-beanutils-java (1.10.1-1.1) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libsnappy-java (1.1.10.8-1) ... Setting up libxsom-java (2.3.0.1-11) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.18.0-1) ... Setting up libpython3.13-stdlib:amd64 (3.13.9-1) ... Setting up libio-socket-ssl-perl (2.095-1) ... Setting up gpg (2.4.8-4) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up libhttp-message-perl (7.01-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up gpg-agent (2.4.8-4) ... Setting up openjdk-21-jre-headless:amd64 (21.0.9+10-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libhttp-cookies-perl (6.11-1) ... Setting up python3.13 (3.13.9-1) ... Setting up libcommons-io-java (2.19.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2) ... Setting up python3 (3.13.7-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libmaven-resolver-java (1.9.22-1) ... Setting up libmodule-runtime-perl (0.018-1) ... Setting up libhttpclient-java (4.5.14-1) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libwagon-http-java (3.5.3-2) ... Setting up libmaven-shared-utils-java (3.4.2-1) ... Setting up libfastinfoset-java (1.2.12-4) ... Setting up libncbi-ngs3:amd64 (3.2.1+dfsg-5) ... Setting up libngs-jni:amd64 (3.2.1+dfsg-5) ... Setting up libplexus-io-java (3.3.1-2) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up debhelper (13.28) ... Setting up libplexus-archiver-java (4.6.1-1) ... Setting up libngs-java:amd64 (3.2.1+dfsg-5) ... Setting up libbarclay-java (6.0.0+dfsg-1) ... Setting up libmaven-archiver-java (3.6.2-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libwww-perl (6.81-1) ... Setting up devscripts (2.25.22) ... Setting up libguava-java (32.0.1-1) ... Setting up javahelper (0.81) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up libguice-java (5.1.0-1) ... Setting up libmaven3-core-java (3.9.9-1) ... Setting up libmaven-shared-incremental-java (1.1-6) ... Setting up libmaven-shared-io-java (3.0.0-4) ... Setting up libplexus-compiler-java (2.13.0-1) ... Setting up libmaven-compiler-plugin-java (3.13.0-1) ... Setting up libjni-inchi-java (0.8+dfsg-8) ... Setting up libmaven-file-management-java (3.0.0-2) ... Setting up libjmol-java (16.2.33+dfsg-1) ... Setting up libmaven-jar-plugin-java (3.3.0-2) ... Setting up libcommons-text-java (1.13.1-1) ... Setting up libmsgpack-java (0.9.6-1) ... Setting up libmmtf-java (1.0.11-1) ... Setting up libjgrapht-java (1.5.2-2) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_BR_Root_CA_2_2023.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_2_2023.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up ant (1.10.15-1) ... Setting up junit4 (4.13.2-5) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.9+10-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up ant-optional (1.10.15-1) ... Setting up default-jdk-headless (2:1.21-76) ... Setting up libjson-java (3.2.0+dfsg-2) ... Setting up libhtsjdk-java (4.1.3+dfsg-2) ... Setting up libistack-commons-java (3.0.6-5) ... Setting up libgkl-java (0.9.1+dfsg-2) ... Setting up libpicard-java (3.3.0+dfsg-2) ... Setting up libcodemodel-java (2.6+jaxb2.3.0.1-11) ... Setting up libtxw2-java (2.3.0.1-11) ... Setting up libjaxb-java (2.3.0.1-11) ... Setting up libbiojava6-java (6.1.0+dfsg-6) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/drop-seq-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../drop-seq_3.0.2+dfsg-2_source.changes dpkg-buildpackage: info: source package drop-seq dpkg-buildpackage: info: source version 3.0.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with javahelper jh_clean Duplicate specification "u=s" for option "u" debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_clean rm -rf dist lib # Removing .class files created during the build. find . -name "*.class" -delete # Removing classes from testFixtures we put under src/tests. rm -r src/tests/java/org/broadinstitute/dropseqrna/utils rm src/tests/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java rm: cannot remove 'src/tests/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java': No such file or directory make[1]: [debian/rules:56: override_dh_clean] Error 1 (ignored) make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' debian/rules binary dh binary --with javahelper dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_auto_configure mkdir -p lib/test ln -s /usr/share/java/commons-collections4.jar lib/commons-collections4.jar ln -s /usr/share/java/biojava6-alignment.jar lib/biojava6-alignment.jar ln -s /usr/share/java/biojava6-core.jar lib/biojava6-core.jar ln -s /usr/share/java/commons-io.jar lib/commons-io.jar ln -s /usr/share/java/commons-lang.jar lib/commons-lang.jar ln -s /usr/share/java/commons-math3.jar lib/commons-math3.jar ln -s /usr/share/java/htsjdk.jar lib/htsjdk.jar ln -s /usr/share/java/la4j.jar lib/la4j.jar ln -s /usr/share/java/picard.jar lib/picard.jar ln -s /usr/share/java/snakeyaml.jar lib/snakeyaml.jar ln -s /usr/share/java/testng.jar lib/test/testng.jar ln -s /usr/share/java/junit4.jar lib/test/junit.jar # Putting util classes under src/tests so that tests find them. cp -r src/testFixtures/java/org/broadinstitute/dropseqrna/utils src/tests/java/org/broadinstitute/dropseqrna cp -r src/testFixtures/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java src/tests/java/org/broadinstitute/dropseqrna/barnyard make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' jh_linkjars dh_auto_build ant -propertyfile ./debian/ant.properties -Duser.name debian Buildfile: /build/reproducible-path/drop-seq-3.0.2+dfsg/build.xml compile-src: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/classes [javac] Compiling 354 source files to /build/reproducible-path/drop-seq-3.0.2+dfsg/classes [javac] Note: Annotation processing is enabled because one or more processors were found [javac] on the class path. A future release of javac may disable annotation processing [javac] unless at least one processor is specified by name (-processor), or a search [javac] path is specified (--processor-path, --processor-module-path), or annotation [javac] processing is enabled explicitly (-proc:only, -proc:full). [javac] Use -Xlint:-options to suppress this message. [javac] Use -proc:none to disable annotation processing. [javac] warning: Implicitly compiled files were not subject to annotation processing. [javac] Use -proc:none to disable annotation processing or -implicit to specify a policy for implicit compilation. [javac] Note: /build/reproducible-path/drop-seq-3.0.2+dfsg/src/java/org/broadinstitute/dropseqrna/utils/FileListParsingUtils.java uses or overrides a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning compile-tests: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/testclasses [javac] Compiling 122 source files to /build/reproducible-path/drop-seq-3.0.2+dfsg/testclasses [javac] Note: Annotation processing is enabled because one or more processors were found [javac] on the class path. A future release of javac may disable annotation processing [javac] unless at least one processor is specified by name (-processor), or a search [javac] path is specified (--processor-path, --processor-module-path), or annotation [javac] processing is enabled explicitly (-proc:only, -proc:full). [javac] Use -Xlint:-options to suppress this message. [javac] Use -proc:none to disable annotation processing. [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. compile: jar-executable: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/dist [jar] Building jar: /build/reproducible-path/drop-seq-3.0.2+dfsg/dist/dropseq.jar all: BUILD SUCCESSFUL Total time: 8 seconds dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install dh_install jh_installjavadoc dh_installdocs dh_installchangelogs debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_lintian dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_fixperms find debian/drop-seq-testdata/usr/share -type f -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'drop-seq-tools' in '../drop-seq-tools_3.0.2+dfsg-2_all.deb'. dpkg-deb: building package 'drop-seq-testdata' in '../drop-seq-testdata_3.0.2+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2102242 and its subdirectories I: Current time: Thu Oct 30 20:39:41 -12 2025 I: pbuilder-time-stamp: 1761899981 Fri Oct 31 08:39:41 UTC 2025 I: Signing ./b1/drop-seq_3.0.2+dfsg-2_amd64.buildinfo as drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc Fri Oct 31 08:39:41 UTC 2025 I: Signed ./b1/drop-seq_3.0.2+dfsg-2_amd64.buildinfo as ./b1/drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc Fri Oct 31 08:39:41 UTC 2025 - build #1 for drop-seq/forky/amd64 on ionos1-amd64 done. Starting cleanup. All cleanup done. Fri Oct 31 08:39:41 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Hnf9os6N, removing. /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:39 b1 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:36 b2 -rw-rw-r-- 1 jenkins jenkins 2393 Oct 2 14:49 drop-seq_3.0.2+dfsg-2.dsc -rw------- 1 jenkins jenkins 3520 Oct 31 08:36 rbuildlog.tZsD6Cw /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1: total 140436 -rw-r--r-- 1 jenkins jenkins 111917 Oct 31 08:39 build.log -rw-r--r-- 1 jenkins jenkins 143009156 Oct 31 08:39 drop-seq-testdata_3.0.2+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 568436 Oct 31 08:39 drop-seq-tools_3.0.2+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 66024 Oct 31 08:39 drop-seq_3.0.2+dfsg-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2393 Oct 31 08:39 drop-seq_3.0.2+dfsg-2.dsc -rw-r--r-- 1 jenkins jenkins 12099 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 12981 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1553 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1347 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2: total 0 Fri Oct 31 08:39:42 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 30 20:36:34 -12 2025 I: pbuilder-time-stamp: 1761899794 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [drop-seq_3.0.2+dfsg-2.dsc] I: copying [./drop-seq_3.0.2+dfsg.orig.tar.xz] I: copying [./drop-seq_3.0.2+dfsg-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./drop-seq_3.0.2+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting drop-seq in drop-seq-3.0.2+dfsg dpkg-source: info: unpacking drop-seq_3.0.2+dfsg.orig.tar.xz dpkg-source: info: unpacking drop-seq_3.0.2+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_git.patch dpkg-source: info: applying debian_packaged_libs.patch dpkg-source: info: applying link_excluded_file.patch dpkg-source: info: applying paths_in_scripts.patch dpkg-source: info: applying no_google_api_gax.patch dpkg-source: info: applying openjdk_21_syntax.patch dpkg-source: info: applying put_defs_sh_out_of_path.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2102242/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='35adbac08202471aa61222dfab945f14' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2102242' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_k9Pk --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1 --logfile b1/build.log drop-seq_3.0.2+dfsg-2.dsc' SUDO_GID='110' SUDO_HOME='/var/lib/jenkins' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2102242/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), javahelper, default-jdk-headless, libbiojava6-java, libhtsjdk-java, libpicard-java, libcommons-collections4-java, libcommons-lang-java, libguava-java, libyaml-snake-java, libla4j-java, libjcommander-java, junit4, testng dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on javahelper; however: Package javahelper is not installed. pbuilder-satisfydepends-dummy depends on default-jdk-headless; however: Package default-jdk-headless is not installed. pbuilder-satisfydepends-dummy depends on libbiojava6-java; however: Package libbiojava6-java is not installed. pbuilder-satisfydepends-dummy depends on libhtsjdk-java; however: Package libhtsjdk-java is not installed. pbuilder-satisfydepends-dummy depends on libpicard-java; however: Package libpicard-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-collections4-java; however: Package libcommons-collections4-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-lang-java; however: Package libcommons-lang-java is not installed. pbuilder-satisfydepends-dummy depends on libguava-java; however: Package libguava-java is not installed. pbuilder-satisfydepends-dummy depends on libyaml-snake-java; however: Package libyaml-snake-java is not installed. pbuilder-satisfydepends-dummy depends on libla4j-java; however: Package libla4j-java is not installed. pbuilder-satisfydepends-dummy depends on libjcommander-java; however: Package libjcommander-java is not installed. pbuilder-satisfydepends-dummy depends on junit4; however: Package junit4 is not installed. pbuilder-satisfydepends-dummy depends on testng; however: Package testng is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: ant{a} ant-optional{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} fastjar{a} file{a} gettext{a} gettext-base{a} gpg{a} gpg-agent{a} gpgconf{a} groff-base{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} junit4{a} libactivation-java{a} libantlr4-runtime-java{a} libaopalliance-java{a} libapache-pom-java{a} libapfloat-java{a} libarchive-zip-perl{a} libargs4j-java{a} libasm-java{a} libassuan9{a} libatinject-jsr330-api-java{a} libb-hooks-op-check-perl{a} libbarclay-java{a} libbiojava6-java{a} libbsh-java{a} libcdi-api-java{a} libciftools-java{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcodemodel-java{a} libcommons-beanutils-java{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-collections3-java{a} libcommons-collections4-java{a} libcommons-compress-java{a} libcommons-exec-java{a} libcommons-io-java{a} libcommons-jexl2-java{a} libcommons-lang-java{a} libcommons-lang3-java{a} libcommons-logging-java{a} libcommons-math-java{a} libcommons-math3-java{a} libcommons-parent-java{a} libcommons-text-java{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdom4j-java{a} libdtd-parser-java{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} liberror-prone-java{a} libexec-maven-plugin-java{a} libexpat1{a} libezmorph-java{a} libfastinfoset-java{a} libfastutil-java{a} libffi8{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfreemarker-java{a} libgatk-native-bindings-java{a} libgcrypt20{a} libgeronimo-annotation-1.3-spec-java{a} libgeronimo-interceptor-3.0-spec-java{a} libgkl-java{a} libgoogle-gson-java{a} libgpg-error0{a} libguava-java{a} libguice-java{a} libhamcrest-java{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhtsjdk-java{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhttpclient-java{a} libhttpcore-java{a} libimport-into-perl{a} libinchi1.07{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libistack-commons-java{a} libitext5-java{a} libjackson2-annotations-java{a} libjackson2-core-java{a} libjackson2-databind-java{a} libjaxb-api-java{a} libjaxb-java{a} libjaxen-java{a} libjcommander-java{a} libjgrapht-java{a} libjgraphx-java{a} libjheaps-java{a} libjmol-java{a} libjni-inchi-java{a} libjni-inchi-jni{a} libjoptsimple-java{a} libjpeg62-turbo{a} libjson-java{a} libjson-simple-java{a} libjsoup-java{a} libjsr305-java{a} libksba8{a} libla4j-java{a} liblcms2-2{a} liblightcouch-java{a} liblog4j1.2-java{a} liblog4j2-java{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmaven-archiver-java{a} libmaven-compiler-plugin-java{a} libmaven-file-management-java{a} libmaven-jar-plugin-java{a} libmaven-parent-java{a} libmaven-resolver-java{a} libmaven-shared-incremental-java{a} libmaven-shared-io-java{a} libmaven-shared-utils-java{a} libmaven3-core-java{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmmtf-java{a} libmodule-runtime-perl{a} libmongodb-java{a} libmoo-perl{a} libmsgpack-java{a} libnaga-java{a} libncbi-ngs3{a} libncbi-vdb3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libngs-java{a} libngs-jni{a} libnpth0t64{a} libnspr4{a} libnss3{a} libparams-classify-perl{a} libpcsclite1{a} libpicard-java{a} libpipeline1{a} libplexus-archiver-java{a} libplexus-cipher-java{a} libplexus-classworlds-java{a} libplexus-compiler-java{a} libplexus-component-annotations-java{a} libplexus-container-default-java{a} libplexus-interpolation-java{a} libplexus-io-java{a} libplexus-languages-java{a} libplexus-sec-dispatcher-java{a} libplexus-utils2-java{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqdox2-java{a} libreadline8t64{a} librelaxng-datatype-java{a} librhino-java{a} librngom-java{a} librole-tiny-perl{a} libsisu-inject-java{a} libsisu-plexus-java{a} libslf4j-java{a} libsnappy-java{a} libsnappy-jni{a} libsnappy1v5{a} libstax-ex-java{a} libstreambuffer-java{a} libsub-quote-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libtxw2-java{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvecmath-java{a} libwagon-http-java{a} libwagon-provider-api-java{a} libwww-perl{a} libwww-robotrules-perl{a} libxbean-reflect-java{a} libxerces2-java{a} libxml-commons-external-java{a} libxml-commons-resolver1.1-java{a} libxml2-16{a} libxom-java{a} libxsom-java{a} libxz-java{a} libyaml-snake-java{a} m4{a} man-db{a} media-types{a} ncbi-vdb-data{a} netbase{a} openjdk-21-jdk-headless{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} python3{a} python3-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} rsopv{a} sensible-utils{a} testng{a} tzdata{a} wdiff{a} The following packages are RECOMMENDED but will NOT be installed: curl debian-keyring debian-tag2upload-keyring dput dput-ng dupload equivs git-debpush gnupg libarchive-cpio-perl libasound2t64 libcups2t64 libdata-dump-perl libdistro-info-perl libfontconfig1 libfreetype6 libgitlab-api-v4-perl libgkl-jni libgpg-error-l10n libharfbuzz0b libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjansi-java libjson-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmetacpan-client-perl libnamespace-clean-perl liboss4-salsa-asound2 libsoap-lite-perl libstring-shellquote-perl libxstring-perl licensecheck lintian lynx lzip pristine-tar python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg r-base-core strace unzip wget 0 packages upgraded, 248 newly installed, 0 to remove and 0 not upgraded. Need to get 246 MB of archives. After unpacking 516 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.9-1 [865 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.9-1 [2257 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 media-types all 14.0.0 [30.8 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.9-1 [1965 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.9-1 [764 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 openssl amd64 3.5.4-1 [1496 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 ca-certificates all 20250419 [162 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 java-common all 0.76 [6776 B] Get: 30 http://deb.debian.org/debian forky/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libnspr4 amd64 2:4.37-1 [111 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libnss3 amd64 2:3.117-1 [1429 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libpcsclite1 amd64 2.4.0-1 [55.7 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 openjdk-21-jre-headless amd64 21.0.9+10-1 [41.9 MB] Get: 36 http://deb.debian.org/debian forky/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get: 37 http://deb.debian.org/debian forky/main amd64 ant all 1.10.15-1 [2163 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 ant-optional all 1.10.15-1 [456 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 46 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 51 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 57 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 58 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Get: 59 http://deb.debian.org/debian forky/main amd64 openjdk-21-jdk-headless amd64 21.0.9+10-1 [83.0 MB] Get: 60 http://deb.debian.org/debian forky/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get: 61 http://deb.debian.org/debian forky/main amd64 libgpg-error0 amd64 1.56-2 [89.1 kB] Get: 62 http://deb.debian.org/debian forky/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB] Get: 63 http://deb.debian.org/debian forky/main amd64 libgcrypt20 amd64 1.11.2-2 [865 kB] Get: 64 http://deb.debian.org/debian forky/main amd64 gpgconf amd64 2.4.8-4 [129 kB] Get: 65 http://deb.debian.org/debian forky/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get: 66 http://deb.debian.org/debian forky/main amd64 libnpth0t64 amd64 1.8-3 [23.2 kB] Get: 67 http://deb.debian.org/debian forky/main amd64 gpg amd64 2.4.8-4 [639 kB] Get: 68 http://deb.debian.org/debian forky/main amd64 pinentry-curses amd64 1.3.2-3 [87.8 kB] Get: 69 http://deb.debian.org/debian forky/main amd64 gpg-agent amd64 2.4.8-4 [273 kB] Get: 70 http://deb.debian.org/debian forky/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B] Get: 71 http://deb.debian.org/debian forky/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 72 http://deb.debian.org/debian forky/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 73 http://deb.debian.org/debian forky/main amd64 libfile-touch-perl all 0.12-2 [8816 B] Get: 74 http://deb.debian.org/debian forky/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 75 http://deb.debian.org/debian forky/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get: 76 http://deb.debian.org/debian forky/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB] Get: 77 http://deb.debian.org/debian forky/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get: 78 http://deb.debian.org/debian forky/main amd64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get: 79 http://deb.debian.org/debian forky/main amd64 libdevel-callchecker-perl amd64 0.009-2 [15.6 kB] Get: 80 http://deb.debian.org/debian forky/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get: 81 http://deb.debian.org/debian forky/main amd64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get: 82 http://deb.debian.org/debian forky/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get: 83 http://deb.debian.org/debian forky/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 84 http://deb.debian.org/debian forky/main amd64 libsub-quote-perl all 2.006009-1 [21.3 kB] Get: 85 http://deb.debian.org/debian forky/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get: 86 http://deb.debian.org/debian forky/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 87 http://deb.debian.org/debian forky/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 88 http://deb.debian.org/debian forky/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 89 http://deb.debian.org/debian forky/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 90 http://deb.debian.org/debian forky/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 91 http://deb.debian.org/debian forky/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 92 http://deb.debian.org/debian forky/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get: 93 http://deb.debian.org/debian forky/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 94 http://deb.debian.org/debian forky/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 95 http://deb.debian.org/debian forky/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 96 http://deb.debian.org/debian forky/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 97 http://deb.debian.org/debian forky/main amd64 libhttp-message-perl all 7.01-1 [80.0 kB] Get: 98 http://deb.debian.org/debian forky/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 99 http://deb.debian.org/debian forky/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 100 http://deb.debian.org/debian forky/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 101 http://deb.debian.org/debian forky/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB] Get: 102 http://deb.debian.org/debian forky/main amd64 libio-socket-ssl-perl all 2.095-1 [226 kB] Get: 103 http://deb.debian.org/debian forky/main amd64 libnet-http-perl all 6.24-1 [23.2 kB] Get: 104 http://deb.debian.org/debian forky/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 105 http://deb.debian.org/debian forky/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 106 http://deb.debian.org/debian forky/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 107 http://deb.debian.org/debian forky/main amd64 libwww-perl all 6.81-1 [186 kB] Get: 108 http://deb.debian.org/debian forky/main amd64 patchutils amd64 0.4.3-1 [79.1 kB] Get: 109 http://deb.debian.org/debian forky/main amd64 rsopv amd64 0.6.4-1 [1385 kB] Get: 110 http://deb.debian.org/debian forky/main amd64 wdiff amd64 1.2.2-9 [122 kB] Get: 111 http://deb.debian.org/debian forky/main amd64 devscripts all 2.25.22 [1046 kB] Get: 112 http://deb.debian.org/debian forky/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get: 113 http://deb.debian.org/debian forky/main amd64 jarwrapper all 0.81 [9784 B] Get: 114 http://deb.debian.org/debian forky/main amd64 javahelper all 0.81 [79.4 kB] Get: 115 http://deb.debian.org/debian forky/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get: 116 http://deb.debian.org/debian forky/main amd64 junit4 all 4.13.2-5 [350 kB] Get: 117 http://deb.debian.org/debian forky/main amd64 libactivation-java all 1.2.0-2 [84.7 kB] Get: 118 http://deb.debian.org/debian forky/main amd64 libantlr4-runtime-java all 4.9.2-3 [318 kB] Get: 119 http://deb.debian.org/debian forky/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get: 120 http://deb.debian.org/debian forky/main amd64 libapache-pom-java all 33-2 [5852 B] Get: 121 http://deb.debian.org/debian forky/main amd64 libapfloat-java all 1.14.0-2 [725 kB] Get: 122 http://deb.debian.org/debian forky/main amd64 libargs4j-java all 2.33-2 [138 kB] Get: 123 http://deb.debian.org/debian forky/main amd64 libasm-java all 9.8-2 [391 kB] Get: 124 http://deb.debian.org/debian forky/main amd64 libatinject-jsr330-api-java all 1.0+ds1-6 [5112 B] Get: 125 http://deb.debian.org/debian forky/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get: 126 http://deb.debian.org/debian forky/main amd64 libcommons-lang3-java all 3.17.0-2 [641 kB] Get: 127 http://deb.debian.org/debian forky/main amd64 libfreemarker-java all 2.3.32-2.1 [1525 kB] Get: 128 http://deb.debian.org/debian forky/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get: 129 http://deb.debian.org/debian forky/main amd64 libjoptsimple-java all 5.0.4-7 [73.7 kB] Get: 130 http://deb.debian.org/debian forky/main amd64 libcommons-codec-java all 1.18.0-1 [304 kB] Get: 131 http://deb.debian.org/debian forky/main amd64 libcommons-logging-java all 1.3.0-2 [68.6 kB] Get: 132 http://deb.debian.org/debian forky/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get: 133 http://deb.debian.org/debian forky/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get: 134 http://deb.debian.org/debian forky/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get: 135 http://deb.debian.org/debian forky/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get: 136 http://deb.debian.org/debian forky/main amd64 libslf4j-java all 1.7.32-2 [142 kB] Get: 137 http://deb.debian.org/debian forky/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get: 138 http://deb.debian.org/debian forky/main amd64 libbarclay-java all 6.0.0+dfsg-1 [110 kB] Get: 139 http://deb.debian.org/debian forky/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get: 140 http://deb.debian.org/debian forky/main amd64 libciftools-java all 7.0.1-1 [2228 kB] Get: 141 http://deb.debian.org/debian forky/main amd64 libcommons-math-java all 2.2-9 [933 kB] Get: 142 http://deb.debian.org/debian forky/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get: 143 http://deb.debian.org/debian forky/main amd64 libjsr305-java all 0.1~+svn49-12 [26.6 kB] Get: 144 http://deb.debian.org/debian forky/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get: 145 http://deb.debian.org/debian forky/main amd64 libitext5-java all 5.5.13.3-4 [2667 kB] Get: 146 http://deb.debian.org/debian forky/main amd64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB] Get: 147 http://deb.debian.org/debian forky/main amd64 libjackson2-core-java all 2.14.1-1 [447 kB] Get: 148 http://deb.debian.org/debian forky/main amd64 libjackson2-databind-java all 2.14.0+ds-1 [1532 kB] Get: 149 http://deb.debian.org/debian forky/main amd64 libjaxb-api-java all 2.3.1-1 [119 kB] Get: 150 http://deb.debian.org/debian forky/main amd64 libjaxen-java all 1.2.0-1 [214 kB] Get: 151 http://deb.debian.org/debian forky/main amd64 libdom4j-java all 2.1.4-1 [312 kB] Get: 152 http://deb.debian.org/debian forky/main amd64 libcommons-io-java all 2.19.0-1 [524 kB] Get: 153 http://deb.debian.org/debian forky/main amd64 libmaven-shared-utils-java all 3.4.2-1 [137 kB] Get: 154 http://deb.debian.org/debian forky/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get: 155 http://deb.debian.org/debian forky/main amd64 libguice-java all 5.1.0-1 [932 kB] Get: 156 http://deb.debian.org/debian forky/main amd64 libmaven-parent-java all 43-2 [6252 B] Get: 157 http://deb.debian.org/debian forky/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get: 158 http://deb.debian.org/debian forky/main amd64 libwagon-provider-api-java all 3.5.3-2 [48.3 kB] Get: 159 http://deb.debian.org/debian forky/main amd64 libmaven-resolver-java all 1.9.22-1 [729 kB] Get: 160 http://deb.debian.org/debian forky/main amd64 libplexus-cipher-java all 2.0-1 [14.9 kB] Get: 161 http://deb.debian.org/debian forky/main amd64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB] Get: 162 http://deb.debian.org/debian forky/main amd64 libplexus-component-annotations-java all 2.1.1-1 [7660 B] Get: 163 http://deb.debian.org/debian forky/main amd64 libplexus-interpolation-java all 1.27-1 [76.8 kB] Get: 164 http://deb.debian.org/debian forky/main amd64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB] Get: 165 http://deb.debian.org/debian forky/main amd64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-5 [8444 B] Get: 166 http://deb.debian.org/debian forky/main amd64 libcdi-api-java all 1.2-4 [55.3 kB] Get: 167 http://deb.debian.org/debian forky/main amd64 libsisu-inject-java all 0.3.5-1 [352 kB] Get: 168 http://deb.debian.org/debian forky/main amd64 libsisu-plexus-java all 0.3.5-1 [183 kB] Get: 169 http://deb.debian.org/debian forky/main amd64 libmaven3-core-java all 3.9.9-1 [1661 kB] Get: 170 http://deb.debian.org/debian forky/main amd64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB] Get: 171 http://deb.debian.org/debian forky/main amd64 libmaven-file-management-java all 3.0.0-2 [35.1 kB] Get: 172 http://deb.debian.org/debian forky/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get: 173 http://deb.debian.org/debian forky/main amd64 libplexus-io-java all 3.3.1-2 [65.3 kB] Get: 174 http://deb.debian.org/debian forky/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.7 kB] Get: 175 http://deb.debian.org/debian forky/main amd64 libsnappy-jni amd64 1.1.10.8-1 [6548 B] Get: 176 http://deb.debian.org/debian forky/main amd64 libsnappy-java all 1.1.10.8-1 [87.8 kB] Get: 177 http://deb.debian.org/debian forky/main amd64 libxz-java all 1.9-1 [143 kB] Get: 178 http://deb.debian.org/debian forky/main amd64 libplexus-archiver-java all 4.6.1-1 [187 kB] Get: 179 http://deb.debian.org/debian forky/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get: 180 http://deb.debian.org/debian forky/main amd64 libwagon-http-java all 3.5.3-2 [49.6 kB] Get: 181 http://deb.debian.org/debian forky/main amd64 libistack-commons-java all 3.0.6-5 [145 kB] Get: 182 http://deb.debian.org/debian forky/main amd64 libcodemodel-java all 2.6+jaxb2.3.0.1-11 [164 kB] Get: 183 http://deb.debian.org/debian forky/main amd64 librelaxng-datatype-java all 1.0+ds1-4 [11.8 kB] Get: 184 http://deb.debian.org/debian forky/main amd64 librngom-java all 2.3.0.1-11 [292 kB] Get: 185 http://deb.debian.org/debian forky/main amd64 libxsom-java all 2.3.0.1-11 [401 kB] Get: 186 http://deb.debian.org/debian forky/main amd64 libtxw2-java all 2.3.0.1-11 [134 kB] Get: 187 http://deb.debian.org/debian forky/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get: 188 http://deb.debian.org/debian forky/main amd64 libdtd-parser-java all 1.2-1 [64.9 kB] Get: 189 http://deb.debian.org/debian forky/main amd64 libstax-ex-java all 1.7.8-3 [40.9 kB] Get: 190 http://deb.debian.org/debian forky/main amd64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] Get: 191 http://deb.debian.org/debian forky/main amd64 libfastinfoset-java all 1.2.12-4 [347 kB] Get: 192 http://deb.debian.org/debian forky/main amd64 libjaxb-java all 2.3.0.1-11 [1980 kB] Get: 193 http://deb.debian.org/debian forky/main amd64 libmaven-archiver-java all 3.6.2-1 [26.1 kB] Get: 194 http://deb.debian.org/debian forky/main amd64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB] Get: 195 http://deb.debian.org/debian forky/main amd64 libcommons-text-java all 1.13.1-1 [228 kB] Get: 196 http://deb.debian.org/debian forky/main amd64 libfastutil-java all 8.5.16+dfsg-1 [20.2 MB] Get: 197 http://deb.debian.org/debian forky/main amd64 libjheaps-java all 0.14-3 [146 kB] Get: 198 http://deb.debian.org/debian forky/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get: 199 http://deb.debian.org/debian forky/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get: 200 http://deb.debian.org/debian forky/main amd64 libjgraphx-java all 2.1.0.7-6 [577 kB] Get: 201 http://deb.debian.org/debian forky/main amd64 libjgrapht-java all 1.5.2-2 [1616 kB] Get: 202 http://deb.debian.org/debian forky/main amd64 libinchi1.07 amd64 1.07.3+dfsg-1 [557 kB] Get: 203 http://deb.debian.org/debian forky/main amd64 libjni-inchi-jni amd64 0.8+dfsg-8 [9188 B] Get: 204 http://deb.debian.org/debian forky/main amd64 libcommons-exec-java all 1.3-3 [48.4 kB] Get: 205 http://deb.debian.org/debian forky/main amd64 libexec-maven-plugin-java all 3.1.0-2 [66.7 kB] Get: 206 http://deb.debian.org/debian forky/main amd64 libmaven-shared-incremental-java all 1.1-6 [9916 B] Get: 207 http://deb.debian.org/debian forky/main amd64 libcommons-lang-java all 2.6-12 [273 kB] Get: 208 http://deb.debian.org/debian forky/main amd64 libxbean-reflect-java all 4.5-9 [132 kB] Get: 209 http://deb.debian.org/debian forky/main amd64 libplexus-container-default-java all 2.1.1-1 [193 kB] Get: 210 http://deb.debian.org/debian forky/main amd64 libplexus-compiler-java all 2.13.0-1 [99.5 kB] Get: 211 http://deb.debian.org/debian forky/main amd64 libqdox2-java all 2.0.3-1 [296 kB] Get: 212 http://deb.debian.org/debian forky/main amd64 libplexus-languages-java all 1.1.1-3 [47.8 kB] Get: 213 http://deb.debian.org/debian forky/main amd64 libmaven-compiler-plugin-java all 3.13.0-1 [78.8 kB] Get: 214 http://deb.debian.org/debian forky/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get: 215 http://deb.debian.org/debian forky/main amd64 libjni-inchi-java all 0.8+dfsg-8 [33.6 kB] Get: 216 http://deb.debian.org/debian forky/main amd64 libnaga-java all 3.0+svn80-5 [43.5 kB] Get: 217 http://deb.debian.org/debian forky/main amd64 libjmol-java all 16.2.33+dfsg-1 [10.4 MB] Get: 218 http://deb.debian.org/debian forky/main amd64 libjson-simple-java all 2.3.0-2 [61.7 kB] Get: 219 http://deb.debian.org/debian forky/main amd64 libmsgpack-java all 0.9.6-1 [161 kB] Get: 220 http://deb.debian.org/debian forky/main amd64 libmmtf-java all 1.0.11-1 [187 kB] Get: 221 http://deb.debian.org/debian forky/main amd64 libvecmath-java all 1.5.2-7 [97.0 kB] Get: 222 http://deb.debian.org/debian forky/main amd64 libbiojava6-java all 6.1.0+dfsg-6 [5359 kB] Get: 223 http://deb.debian.org/debian forky/main amd64 libbsh-java all 2.0b4-20 [291 kB] Get: 224 http://deb.debian.org/debian forky/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get: 225 http://deb.debian.org/debian forky/main amd64 libcommons-beanutils-java all 1.10.1-1.1 [231 kB] Get: 226 http://deb.debian.org/debian forky/main amd64 libcommons-collections4-java all 4.4-2 [682 kB] Get: 227 http://deb.debian.org/debian forky/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get: 228 http://deb.debian.org/debian forky/main amd64 libcommons-math3-java all 3.6.1-4 [2040 kB] Get: 229 http://deb.debian.org/debian forky/main amd64 libezmorph-java all 1.0.6-4 [75.9 kB] Get: 230 http://deb.debian.org/debian forky/main amd64 libgatk-native-bindings-java all 1.1.0+dfsg-1 [11.3 kB] Get: 231 http://deb.debian.org/debian forky/main amd64 libxom-java all 1.3.9-1 [174 kB] Get: 232 http://deb.debian.org/debian forky/main amd64 libjson-java all 3.2.0+dfsg-2 [142 kB] Get: 233 http://deb.debian.org/debian forky/main amd64 libmbedcrypto16 amd64 3.6.4-2 [360 kB] Get: 234 http://deb.debian.org/debian forky/main amd64 libmbedx509-7 amd64 3.6.4-2 [151 kB] Get: 235 http://deb.debian.org/debian forky/main amd64 libmbedtls21 amd64 3.6.4-2 [242 kB] Get: 236 http://deb.debian.org/debian forky/main amd64 ncbi-vdb-data all 3.2.1+dfsg-2 [88.5 kB] Get: 237 http://deb.debian.org/debian forky/main amd64 libncbi-vdb3 amd64 3.2.1+dfsg-2 [1164 kB] Get: 238 http://deb.debian.org/debian forky/main amd64 libncbi-ngs3 amd64 3.2.1+dfsg-5 [159 kB] Get: 239 http://deb.debian.org/debian forky/main amd64 libngs-jni amd64 3.2.1+dfsg-5 [27.8 kB] Get: 240 http://deb.debian.org/debian forky/main amd64 libngs-java amd64 3.2.1+dfsg-5 [114 kB] Get: 241 http://deb.debian.org/debian forky/main amd64 librhino-java all 1.7.15-1 [1382 kB] Get: 242 http://deb.debian.org/debian forky/main amd64 libhtsjdk-java all 4.1.3+dfsg-2 [1841 kB] Get: 243 http://deb.debian.org/debian forky/main amd64 libgkl-java all 0.9.1+dfsg-2 [28.2 kB] Get: 244 http://deb.debian.org/debian forky/main amd64 libjcommander-java all 1.71-4 [73.0 kB] Get: 245 http://deb.debian.org/debian forky/main amd64 libla4j-java all 0.6.0-4 [228 kB] Get: 246 http://deb.debian.org/debian forky/main amd64 libpicard-java all 3.3.0+dfsg-2 [1778 kB] Get: 247 http://deb.debian.org/debian forky/main amd64 libyaml-snake-java all 2.0+ds+really1.33-1 [324 kB] Get: 248 http://deb.debian.org/debian forky/main amd64 testng all 6.9.12-4 [795 kB] Fetched 246 MB in 11s (21.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package binfmt-support. Preparing to unpack .../binfmt-support_2.2.2-7_amd64.deb ... Unpacking binfmt-support (2.2.2-7) ... Selecting previously unselected package libexpat1:amd64. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.9-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.9-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.9-1_amd64.deb ... Unpacking python3.13 (3.13.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up wdiff (1.2.2-9) ... Setting up libslf4j-java (1.7.32-2) ... Setting up libfile-which-perl (1.27-2) ... Setting up libplexus-utils2-java (3.4.2-1) ... Setting up libnpth0t64:amd64 (1.8-3) ... Setting up libplexus-classworlds-java (2.7.0-1) ... Setting up libjsr305-java (0.1~+svn49-12) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libgatk-native-bindings-java (1.1.0+dfsg-1) ... Setting up libgpg-error0:amd64 (1.56-2) ... Setting up java-common (0.76) ... Setting up libdynaloader-functions-perl (0.004-2) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up libqdox2-java (2.0.3-1) ... Setting up libla4j-java (0.6.0-4) ... Setting up libaopalliance-java (20070526-7) ... Setting up libcommons-cli-java (1.6.0-1) ... Setting up libjheaps-java (0.14-3) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libcommons-exec-java (1.3-3) ... Setting up libvecmath-java (1.5.2-7) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libgoogle-gson-java (2.10.1-1) ... Setting up libxml2-16:amd64 (2.14.6+dfsg-0.1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.28) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up libasm-java (9.8-2) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up liblog4j1.2-java (1.2.17-11) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up libgcrypt20:amd64 (1.11.2-2) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libplexus-component-annotations-java (2.1.1-1) ... Setting up libantlr4-runtime-java (4.9.2-3) ... Setting up file (1:5.46-5) ... Setting up libjson-simple-java (2.3.0-2) ... Setting up libelf1t64:amd64 (0.193-3) ... Setting up libsnappy1v5:amd64 (1.2.2-2) ... Setting up libexec-maven-plugin-java (3.1.0-2) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Oct 31 08:38:38 UTC 2025. Universal Time is now: Fri Oct 31 08:38:38 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... Setting up libgeronimo-interceptor-3.0-spec-java (1.0.1-5) ... Setting up libcommons-collections3-java (3.2.2-3) ... Setting up libio-string-perl (1.08-4) ... Setting up librhino-java (1.7.15-1) ... Setting up autotools-dev (20240727.1) ... Setting up rsopv (0.6.4-1) ... update-alternatives: using /usr/bin/rsopv to provide /usr/bin/sopv (sopv) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.5-4) ... Setting up libjaxen-java (1.2.0-1) ... Setting up libnspr4:amd64 (2:4.37-1) ... Setting up libapache-pom-java (33-2) ... Setting up libatinject-jsr330-api-java (1.0+ds1-6) ... Setting up libplexus-interpolation-java (1.27-1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up libitext5-java (5.5.13.3-4) ... Setting up libxml-commons-resolver1.1-java (1.2-11) ... Setting up libxz-java (1.9-1) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.23.1-2) ... Setting up binfmt-support (2.2.2-7) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b2) ... Setting up libpcsclite1:amd64 (2.4.0-1) ... Setting up libmongodb-java (3.6.3-2) ... Setting up libactivation-java (1.2.0-2) ... Setting up libhamcrest-java (2.2-2) ... Setting up libbsh-java (2.0b4-20) ... Setting up autoconf (2.72-3.1) ... Setting up libapfloat-java (1.14.0-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libffi8:amd64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up libfreemarker-java (2.3.32-2.1) ... Setting up sensible-utils (0.0.26) ... Setting up libjsoup-java (1.15.3-1) ... Setting up libcommons-math-java (2.2-9) ... Setting up libuchardet0:amd64 (0.0.8-2) ... Setting up libassuan9:amd64 (3.0.2-2) ... Setting up libxml-commons-external-java (1.4.01-6) ... Setting up libxbean-reflect-java (4.5-9) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libjackson2-core-java (2.14.1-1) ... Setting up ncbi-vdb-data (3.2.1+dfsg-2) ... Setting up netbase (6.5) ... Setting up libcommons-math3-java (3.6.1-4) ... Setting up libsub-quote-perl (2.006009-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b5) ... Setting up libmbedcrypto16:amd64 (3.6.4-2) ... Setting up libhttpcore-java (4.4.16-1) ... Setting up libjoptsimple-java (5.0.4-7) ... Setting up libxerces2-java (2.12.2-1) ... Setting up libfile-dirlist-perl (0.05-3) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up librelaxng-datatype-java (1.0+ds1-4) ... Setting up libyaml-snake-java (2.0+ds+really1.33-1) ... Setting up openssl (3.5.4-1) ... Setting up libinchi1.07 (1.07.3+dfsg-1) ... Setting up libcdi-api-java (1.2-4) ... Setting up libsnappy-jni (1.1.10.8-1) ... Setting up libezmorph-java (1.0.6-4) ... Setting up readline-common (8.3-3) ... Setting up liburi-perl (5.30-1) ... Setting up libargs4j-java (2.33-2) ... Setting up libfile-touch-perl (0.12-2) ... Setting up dctrl-tools (2.24-3+b1) ... Setting up libnaga-java (3.0+svn80-5) ... Setting up libnet-ssleay-perl:amd64 (1.94-3) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libksba8:amd64 (1.6.7-2+b1) ... Setting up pinentry-curses (1.3.2-3) ... Setting up libdom4j-java (2.1.4-1) ... Setting up libjaxb-api-java (2.3.1-1) ... Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up libwagon-provider-api-java (3.5.3-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libplexus-languages-java (1.1.1-3) ... Setting up jarwrapper (0.81) ... Setting up libtool (2.5.4-7) ... Setting up libstax-ex-java (1.7.8-3) ... Setting up libmaven-parent-java (43-2) ... Setting up libcommons-parent-java (56-1) ... Setting up libcommons-logging-java (1.3.0-2) ... Setting up libnet-http-perl (6.24-1) ... Setting up libsisu-inject-java (0.3.5-1) ... Setting up libnss3:amd64 (2:3.117-1) ... Setting up libciftools-java (7.0.1-1) ... Setting up libxom-java (1.3.9-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-2) ... Setting up libcommons-lang-java (2.6-12) ... Setting up libjackson2-databind-java (2.14.0+ds-1) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up patchutils (0.4.3-1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libsisu-plexus-java (0.3.5-1) ... Setting up libmbedx509-7:amd64 (3.6.4-2) ... Setting up testng (6.9.12-4) ... Setting up libstreambuffer-java (1.5.4-1.1) ... Setting up libcommons-collections4-java (4.4-2) ... Setting up libcommons-lang3-java (3.17.0-2) ... Setting up libmbedtls21:amd64 (3.6.4-2) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up librngom-java (2.3.0.1-11) ... Setting up libjni-inchi-jni (0.8+dfsg-8) ... Setting up libjgraphx-java (2.1.0.7-6) ... Setting up groff-base (1.23.0-9) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ... Setting up gpgconf (2.4.8-4) ... Setting up libcommons-beanutils-java (1.10.1-1.1) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libsnappy-java (1.1.10.8-1) ... Setting up libxsom-java (2.3.0.1-11) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.18.0-1) ... Setting up libpython3.13-stdlib:amd64 (3.13.9-1) ... Setting up libio-socket-ssl-perl (2.095-1) ... Setting up gpg (2.4.8-4) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up libhttp-message-perl (7.01-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up gpg-agent (2.4.8-4) ... Setting up openjdk-21-jre-headless:amd64 (21.0.9+10-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libhttp-cookies-perl (6.11-1) ... Setting up python3.13 (3.13.9-1) ... Setting up libcommons-io-java (2.19.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2) ... Setting up python3 (3.13.7-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libmaven-resolver-java (1.9.22-1) ... Setting up libmodule-runtime-perl (0.018-1) ... Setting up libhttpclient-java (4.5.14-1) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libwagon-http-java (3.5.3-2) ... Setting up libmaven-shared-utils-java (3.4.2-1) ... Setting up libfastinfoset-java (1.2.12-4) ... Setting up libncbi-ngs3:amd64 (3.2.1+dfsg-5) ... Setting up libngs-jni:amd64 (3.2.1+dfsg-5) ... Setting up libplexus-io-java (3.3.1-2) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up debhelper (13.28) ... Setting up libplexus-archiver-java (4.6.1-1) ... Setting up libngs-java:amd64 (3.2.1+dfsg-5) ... Setting up libbarclay-java (6.0.0+dfsg-1) ... Setting up libmaven-archiver-java (3.6.2-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libwww-perl (6.81-1) ... Setting up devscripts (2.25.22) ... Setting up libguava-java (32.0.1-1) ... Setting up javahelper (0.81) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up libguice-java (5.1.0-1) ... Setting up libmaven3-core-java (3.9.9-1) ... Setting up libmaven-shared-incremental-java (1.1-6) ... Setting up libmaven-shared-io-java (3.0.0-4) ... Setting up libplexus-compiler-java (2.13.0-1) ... Setting up libmaven-compiler-plugin-java (3.13.0-1) ... Setting up libjni-inchi-java (0.8+dfsg-8) ... Setting up libmaven-file-management-java (3.0.0-2) ... Setting up libjmol-java (16.2.33+dfsg-1) ... Setting up libmaven-jar-plugin-java (3.3.0-2) ... Setting up libcommons-text-java (1.13.1-1) ... Setting up libmsgpack-java (0.9.6-1) ... Setting up libmmtf-java (1.0.11-1) ... Setting up libjgrapht-java (1.5.2-2) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_BR_Root_CA_2_2023.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_2_2023.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up ant (1.10.15-1) ... Setting up junit4 (4.13.2-5) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.9+10-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up ant-optional (1.10.15-1) ... Setting up default-jdk-headless (2:1.21-76) ... Setting up libjson-java (3.2.0+dfsg-2) ... Setting up libhtsjdk-java (4.1.3+dfsg-2) ... Setting up libistack-commons-java (3.0.6-5) ... Setting up libgkl-java (0.9.1+dfsg-2) ... Setting up libpicard-java (3.3.0+dfsg-2) ... Setting up libcodemodel-java (2.6+jaxb2.3.0.1-11) ... Setting up libtxw2-java (2.3.0.1-11) ... Setting up libjaxb-java (2.3.0.1-11) ... Setting up libbiojava6-java (6.1.0+dfsg-6) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/drop-seq-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../drop-seq_3.0.2+dfsg-2_source.changes dpkg-buildpackage: info: source package drop-seq dpkg-buildpackage: info: source version 3.0.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with javahelper jh_clean Duplicate specification "u=s" for option "u" debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_clean rm -rf dist lib # Removing .class files created during the build. find . -name "*.class" -delete # Removing classes from testFixtures we put under src/tests. rm -r src/tests/java/org/broadinstitute/dropseqrna/utils rm src/tests/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java rm: cannot remove 'src/tests/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java': No such file or directory make[1]: [debian/rules:56: override_dh_clean] Error 1 (ignored) make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' debian/rules binary dh binary --with javahelper dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_auto_configure mkdir -p lib/test ln -s /usr/share/java/commons-collections4.jar lib/commons-collections4.jar ln -s /usr/share/java/biojava6-alignment.jar lib/biojava6-alignment.jar ln -s /usr/share/java/biojava6-core.jar lib/biojava6-core.jar ln -s /usr/share/java/commons-io.jar lib/commons-io.jar ln -s /usr/share/java/commons-lang.jar lib/commons-lang.jar ln -s /usr/share/java/commons-math3.jar lib/commons-math3.jar ln -s /usr/share/java/htsjdk.jar lib/htsjdk.jar ln -s /usr/share/java/la4j.jar lib/la4j.jar ln -s /usr/share/java/picard.jar lib/picard.jar ln -s /usr/share/java/snakeyaml.jar lib/snakeyaml.jar ln -s /usr/share/java/testng.jar lib/test/testng.jar ln -s /usr/share/java/junit4.jar lib/test/junit.jar # Putting util classes under src/tests so that tests find them. cp -r src/testFixtures/java/org/broadinstitute/dropseqrna/utils src/tests/java/org/broadinstitute/dropseqrna cp -r src/testFixtures/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java src/tests/java/org/broadinstitute/dropseqrna/barnyard make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' jh_linkjars dh_auto_build ant -propertyfile ./debian/ant.properties -Duser.name debian Buildfile: /build/reproducible-path/drop-seq-3.0.2+dfsg/build.xml compile-src: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/classes [javac] Compiling 354 source files to /build/reproducible-path/drop-seq-3.0.2+dfsg/classes [javac] Note: Annotation processing is enabled because one or more processors were found [javac] on the class path. A future release of javac may disable annotation processing [javac] unless at least one processor is specified by name (-processor), or a search [javac] path is specified (--processor-path, --processor-module-path), or annotation [javac] processing is enabled explicitly (-proc:only, -proc:full). [javac] Use -Xlint:-options to suppress this message. [javac] Use -proc:none to disable annotation processing. [javac] warning: Implicitly compiled files were not subject to annotation processing. [javac] Use -proc:none to disable annotation processing or -implicit to specify a policy for implicit compilation. [javac] Note: /build/reproducible-path/drop-seq-3.0.2+dfsg/src/java/org/broadinstitute/dropseqrna/utils/FileListParsingUtils.java uses or overrides a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning compile-tests: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/testclasses [javac] Compiling 122 source files to /build/reproducible-path/drop-seq-3.0.2+dfsg/testclasses [javac] Note: Annotation processing is enabled because one or more processors were found [javac] on the class path. A future release of javac may disable annotation processing [javac] unless at least one processor is specified by name (-processor), or a search [javac] path is specified (--processor-path, --processor-module-path), or annotation [javac] processing is enabled explicitly (-proc:only, -proc:full). [javac] Use -Xlint:-options to suppress this message. [javac] Use -proc:none to disable annotation processing. [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. compile: jar-executable: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/dist [jar] Building jar: /build/reproducible-path/drop-seq-3.0.2+dfsg/dist/dropseq.jar all: BUILD SUCCESSFUL Total time: 8 seconds dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install dh_install jh_installjavadoc dh_installdocs dh_installchangelogs debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_lintian dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_fixperms find debian/drop-seq-testdata/usr/share -type f -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'drop-seq-tools' in '../drop-seq-tools_3.0.2+dfsg-2_all.deb'. dpkg-deb: building package 'drop-seq-testdata' in '../drop-seq-testdata_3.0.2+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2102242 and its subdirectories I: Current time: Thu Oct 30 20:39:41 -12 2025 I: pbuilder-time-stamp: 1761899981 Fri Oct 31 08:39:42 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Fri Oct 31 08:39:42 UTC 2025 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Fri Oct 31 08:39:42 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos15-amd64.debian.net is marked as down. Fri Oct 31 08:39:42 UTC 2025 - checking via ssh if ionos15-amd64.debian.net is up. removed '/tmp/read-only-fs-test-brs7mk' ==================================================================================== Fri Oct 31 08:39:42 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos15-amd64, called using "2 drop-seq forky /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC 3.0.2+dfsg-2" as arguments. Fri Oct 31 08:39:42 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-o6bMxwCd" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Oct 31 08:39:42 UTC 2025 I: Downloading source for forky/drop-seq=3.0.2+dfsg-2 Reading package lists... NOTICE: 'drop-seq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/drop-seq.git Please use: git clone https://salsa.debian.org/med-team/drop-seq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 148 MB of source archives. Get:1 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (dsc) [2393 B] Get:2 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (tar) [148 MB] Get:3 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (diff) [66.0 kB] Fetched 148 MB in 3s (48.4 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'drop-seq' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/drop-seq.git Please use: git clone https://salsa.debian.org/med-team/drop-seq.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 148 MB of source archives. Get:1 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (dsc) [2393 B] Get:2 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (tar) [148 MB] Get:3 http://deb.debian.org/debian forky/main drop-seq 3.0.2+dfsg-2 (diff) [66.0 kB] Fetched 148 MB in 3s (48.4 MB/s) Download complete and in download only mode ============================================================================= Re-Building drop-seq in forky on amd64 on ionos15-amd64 now. Date: Fri Oct 31 08:39:47 UTC 2025 Date UTC: Fri Oct 31 08:39:47 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_Nm7r + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' drop-seq = debian-installer -o drop-seq = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' drop-seq = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_Nm7r --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2 --logfile b2/build.log drop-seq_3.0.2+dfsg-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Oct 31 22:39:47 +14 2025 I: pbuilder-time-stamp: 1761899987 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] tar: ./build: time stamp 2026-11-29 07:50:53 is 33988263.018449832 s in the future tar: ./dev/ptmx: time stamp 2026-11-29 07:46:28 is 33987998.018265675 s in the future tar: ./dev/zero: time stamp 2026-11-29 07:46:28 is 33987998.01815812 s in the future tar: ./dev/null: time stamp 2026-11-29 07:46:28 is 33987998.018112064 s in the future tar: ./dev/console: time stamp 2026-11-29 07:46:28 is 33987998.018040881 s in the future tar: ./dev/random: time stamp 2026-11-29 07:46:28 is 33987998.017992996 s in the future tar: ./dev/full: time stamp 2026-11-29 07:46:28 is 33987998.017949799 s in the future tar: ./dev/pts: time stamp 2026-11-29 07:46:28 is 33987998.017877765 s in the future tar: ./dev/tty: time stamp 2026-11-29 07:46:28 is 33987998.017796114 s in the future tar: ./dev/urandom: time stamp 2026-11-29 07:46:28 is 33987998.017749406 s in the future tar: ./etc/terminfo: time stamp 2026-11-29 07:46:38 is 33988008.016810572 s in the future tar: ./etc/opt: time stamp 2026-11-29 07:46:28 is 33987998.01533396 s in the future tar: ./etc/security/opasswd: time stamp 2026-11-29 07:46:40 is 33988010.014399102 s in the future tar: ./etc/security: time stamp 2026-11-29 07:46:40 is 33988010.014068523 s in the future tar: ./etc/shadow: time stamp 2026-11-29 07:51:36 is 33988306.013904228 s in the future tar: ./etc/cron.daily: time stamp 2026-11-30 23:31:29 is 34131099.013727624 s in the future tar: ./etc/apt/apt.conf.d/80proxy: time stamp 2026-11-29 07:52:40 is 33988370.013548385 s in the future tar: ./etc/apt/apt.conf.d/15pbuilder: time stamp 2026-11-29 07:50:53 is 33988263.013485194 s in the future tar: ./etc/apt/apt.conf.d: time stamp 2026-11-30 23:31:29 is 34131099.013380675 s in the future tar: ./etc/apt/sources.list: time stamp 2026-11-29 07:52:40 is 33988370.013276722 s in the future tar: ./etc/apt/trusted.gpg.d: time stamp 2026-11-29 07:50:07 is 33988217.01214444 s in the future tar: ./etc/apt: time stamp 2026-11-29 07:52:40 is 33988370.012056102 s in the future tar: ./etc/fstab: time stamp 2026-11-29 07:46:28 is 33987998.012001125 s in the future tar: ./etc/update-motd.d: time stamp 2026-11-29 07:46:39 is 33988009.011446157 s in the future tar: ./etc/ld.so.conf.d: time stamp 2026-11-29 07:52:00 is 33988330.011163556 s in the future tar: ./etc/gshadow: time stamp 2026-11-29 07:51:36 is 33988306.011036226 s in the future tar: ./etc/shells: time stamp 2026-11-29 07:46:39 is 33988009.010975375 s in the future tar: ./etc/default: time stamp 2026-11-29 07:51:35 is 33988305.010724117 s in the future tar: ./etc/group: time stamp 2026-11-29 07:51:36 is 33988306.010651 s in the future tar: ./etc/ld.so.cache: time stamp 2026-12-02 23:31:27 is 34303897.01051568 s in the future tar: ./etc/.pwd.lock: time stamp 2026-11-29 07:51:36 is 33988306.010401902 s in the future tar: ./etc/skel: time stamp 2026-11-29 07:46:39 is 33988009.010212142 s in the future tar: ./etc/group-: time stamp 2026-11-29 07:46:28 is 33987998.010128015 s in the future tar: ./etc/subuid: time stamp 2026-11-29 07:46:28 is 33987998.0100908 s in the future tar: ./etc/logrotate.d: time stamp 2026-11-30 23:31:29 is 34131099.009586346 s in the future tar: ./etc/pam.d/common-session: time stamp 2026-11-29 07:46:40 is 33988010.009440396 s in the future tar: ./etc/pam.d/common-password: time stamp 2026-11-29 07:46:40 is 33988010.009347707 s in the future tar: ./etc/pam.d/common-account: time stamp 2026-11-29 07:46:40 is 33988010.009237572 s in the future tar: ./etc/pam.d/common-session-noninteractive: time stamp 2026-11-29 07:46:40 is 33988010.009167841 s in the future tar: ./etc/pam.d/common-auth: time stamp 2026-11-29 07:46:40 is 33988010.009100768 s in the future tar: ./etc/pam.d: time stamp 2026-12-02 20:29:29 is 34292979.008912308 s in the future tar: ./etc/subgid: time stamp 2026-11-29 07:46:28 is 33987998.008845374 s in the future tar: ./etc/passwd-: time stamp 2026-11-29 07:46:28 is 33987998.008780572 s in the future tar: ./etc/environment: time stamp 2026-11-29 07:46:40 is 33988010.0086861 s in the future tar: ./etc/perl/Net: time stamp 2026-11-29 07:50:24 is 33988234.008524356 s in the future tar: ./etc/perl: time stamp 2026-11-29 07:50:02 is 33988212.008497913 s in the future tar: ./etc/selinux: time stamp 2026-11-29 07:51:27 is 33988297.008356338 s in the future tar: ./etc/kernel: time stamp 2026-11-29 07:46:41 is 33988011.008264691 s in the future tar: ./etc/passwd: time stamp 2026-11-29 07:51:36 is 33988306.008221307 s in the future tar: ./etc/dpkg/origins/default: time stamp 2026-11-29 07:46:28 is 33987998.008096253 s in the future tar: ./etc/dpkg/origins: time stamp 2026-11-29 07:46:39 is 33988009.008044847 s in the future tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time stamp 2026-11-29 07:52:40 is 33988370.007845877 s in the future tar: ./etc/dpkg/dpkg.cfg.d: time stamp 2026-11-29 07:52:40 is 33988370.007803188 s in the future tar: ./etc/dpkg: time stamp 2026-11-29 07:50:27 is 33988237.00777831 s in the future tar: ./media: time stamp 2026-11-29 07:46:28 is 33987998.007577143 s in the future tar: ./mnt: time stamp 2026-11-29 07:46:28 is 33987998.00750001 s in the future tar: ./opt: time stamp 2026-11-29 07:46:28 is 33987998.006532259 s in the future tar: ./root: time stamp 2026-11-29 07:46:28 is 33987998.006374668 s in the future tar: ./run/lock: time stamp 2026-11-29 07:46:28 is 33987998.006279062 s in the future tar: ./srv: time stamp 2026-11-29 07:46:28 is 33987998.006215261 s in the future tar: ./usr/share/base-passwd: time stamp 2026-11-29 07:46:31 is 33988001.00593321 s in the future tar: ./usr/share/terminfo/a: time stamp 2026-11-29 07:46:37 is 33988007.005817871 s in the future tar: ./usr/share/terminfo/p: time stamp 2026-11-29 07:46:37 is 33988007.005737407 s in the future tar: ./usr/share/terminfo/E: time stamp 2026-11-29 07:46:37 is 33988007.005618928 s in the future tar: ./usr/share/terminfo/s: time stamp 2026-11-29 07:46:37 is 33988007.005265835 s in the future tar: ./usr/share/terminfo/h: time stamp 2026-11-29 07:46:37 is 33988007.005156545 s in the future tar: ./usr/share/terminfo/d: time stamp 2026-11-29 07:46:37 is 33988007.00505147 s in the future tar: ./usr/share/terminfo/l: time stamp 2026-11-29 07:46:37 is 33988007.004955799 s in the future tar: ./usr/share/terminfo/m: time stamp 2026-11-29 07:46:37 is 33988007.003903202 s in the future tar: ./usr/share/terminfo/c: time stamp 2026-11-29 07:46:37 is 33988007.003745361 s in the future tar: ./usr/share/terminfo/v: time stamp 2026-11-29 07:46:37 is 33988007.003535111 s in the future tar: ./usr/share/terminfo/w: time stamp 2026-11-29 07:46:37 is 33988007.00339143 s in the future tar: ./usr/share/terminfo/x: time stamp 2026-11-29 07:46:37 is 33988007.002965454 s in the future tar: ./usr/share/terminfo/t: time stamp 2026-11-29 07:46:37 is 33988007.002818619 s in the future tar: ./usr/share/terminfo/r: time stamp 2026-11-29 07:46:37 is 33988007.002570598 s in the future tar: ./usr/share/gdb/auto-load/usr/lib/x86_64-linux-gnu: time stamp 2026-12-02 23:31:17 is 34303887.00229011 s in the future tar: ./usr/share/gdb/auto-load/usr/lib: time stamp 2026-11-29 07:47:59 is 33988089.002264413 s in the future tar: ./usr/share/gdb/auto-load/usr: time stamp 2026-11-29 07:47:59 is 33988089.00224761 s in the future tar: ./usr/share/gdb/auto-load/lib/x86_64-linux-gnu: time stamp 2026-11-29 07:47:28 is 33988058.002064935 s in the future tar: ./usr/share/gdb/auto-load/lib: time stamp 2026-11-29 07:47:28 is 33988058.002042178 s in the future tar: ./usr/share/gdb/auto-load: time stamp 2026-11-29 07:47:59 is 33988089.002027015 s in the future tar: ./usr/share/gdb: time stamp 2026-11-29 07:47:28 is 33988058.002012507 s in the future tar: ./usr/share/info: time stamp 2026-11-29 07:46:38 is 33988007.998014923 s in the future tar: ./usr/share/build-essential: time stamp 2026-11-29 07:46:42 is 33988011.997837358 s in the future tar: ./usr/share/libc-bin: time stamp 2026-11-29 07:46:34 is 33988003.997722567 s in the future tar: ./usr/share/zsh/vendor-completions: time stamp 2026-11-29 07:50:05 is 33988214.997523543 s in the future tar: ./usr/share/zsh: time stamp 2026-11-29 07:46:47 is 33988016.997498938 s in the future tar: ./usr/share/apt: time stamp 2026-11-30 23:31:29 is 34131098.997394583 s in the future tar: ./usr/share/man/fr/man7: time stamp 2026-11-30 23:31:29 is 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in the future tar: ./usr/share/man/pt/man8: time stamp 2026-11-30 23:31:29 is 34131098.839771823 s in the future tar: ./usr/share/man/pt/man1: time stamp 2026-11-30 23:31:29 is 34131098.83775689 s in the future tar: ./usr/share/man/pt/man5: time stamp 2026-11-30 23:31:29 is 34131098.836168868 s in the future tar: ./usr/share/man/pt: time stamp 2026-11-29 07:46:41 is 33988010.836142157 s in the future tar: ./usr/share/man/sr/man1: time stamp 2026-11-29 07:50:06 is 33988215.835688488 s in the future tar: ./usr/share/man/sr: time stamp 2026-11-29 07:50:06 is 33988215.835661449 s in the future tar: ./usr/share/man/nl/man7: time stamp 2026-11-30 23:31:29 is 34131098.835444691 s in the future tar: ./usr/share/man/nl/man8: time stamp 2026-11-30 23:31:29 is 34131098.834725737 s in the future tar: ./usr/share/man/nl/man1: time stamp 2026-11-30 23:31:29 is 34131098.832383764 s in the future tar: ./usr/share/man/nl/man5: time stamp 2026-11-30 23:31:29 is 34131098.830574882 s in the future tar: 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the future tar: ./usr/share/menu: time stamp 2026-11-29 07:51:41 is 33988310.352090676 s in the future tar: ./usr/share/lintian/overrides: time stamp 2026-12-02 23:31:26 is 34303895.349794664 s in the future tar: ./usr/share/lintian/profiles/dpkg: time stamp 2026-11-29 07:46:32 is 33988001.349651343 s in the future tar: ./usr/share/lintian: time stamp 2026-11-29 07:46:27 is 33987996.349619449 s in the future tar: ./usr/share/locale/fr/LC_MESSAGES: time stamp 2026-11-30 23:31:29 is 34131098.322685961 s in the future tar: ./usr/share/locale/th/LC_MESSAGES: time stamp 2026-11-30 23:31:29 is 34131098.319652119 s in the future tar: ./usr/share/locale/fi/LC_MESSAGES: time stamp 2026-11-30 23:31:29 is 34131098.305652042 s in the future tar: ./usr/share/locale/fa/LC_MESSAGES: time stamp 2026-11-29 07:46:36 is 33988005.305477381 s in the future tar: ./usr/share/locale/id/LC_MESSAGES: time stamp 2026-11-30 05:29:45 is 34066194.292792783 s in the future tar: ./usr/share/locale/uk/LC_MESSAGES: 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2026-11-29 07:46:31 is 33987990.827366903 s in the future tar: ./usr/share/locale/zh_TW: time stamp 2026-11-29 07:46:26 is 33987985.827345135 s in the future tar: ./usr/share/locale/kk/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827321037 s in the future tar: ./usr/share/locale/ia/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827281282 s in the future tar: ./usr/share/locale/de/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827240776 s in the future tar: ./usr/share/locale/de: time stamp 2026-11-29 07:46:26 is 33987985.827217893 s in the future tar: ./usr/share/locale/ko/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827193757 s in the future tar: ./usr/share/locale/ko: time stamp 2026-11-29 07:46:26 is 33987985.827170541 s in the future tar: ./usr/share/locale/ro/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827145308 s in the future tar: ./usr/share/locale/ro: time stamp 2026-11-29 07:46:26 is 33987985.827119839 s in the future tar: ./usr/share/locale/lt/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827094105 s in the future tar: ./usr/share/locale/lt: time stamp 2026-11-29 07:46:26 is 33987985.827071662 s in the future tar: ./usr/share/locale/es/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827046662 s in the future tar: ./usr/share/locale/es: time stamp 2026-11-29 07:46:26 is 33987985.827024648 s in the future tar: ./usr/share/locale/be/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826999252 s in the future tar: ./usr/share/locale/sv/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826960148 s in the future tar: ./usr/share/locale/sv: time stamp 2026-11-29 07:46:26 is 33987985.826937305 s in the future tar: ./usr/share/locale/hu/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826913134 s in the future tar: ./usr/share/locale/hu: time stamp 2026-11-29 07:46:26 is 33987985.826890567 s in the future tar: ./usr/share/locale/tr/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.82686614 s in the future tar: ./usr/share/locale/tr: time stamp 2026-11-29 07:46:26 is 33987985.826843157 s in the future tar: ./usr/share/locale/nb/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826818808 s in the future tar: ./usr/share/locale/nb: time stamp 2026-11-29 07:46:26 is 33987985.826795199 s in the future tar: ./usr/share/locale/et/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826771268 s in the future tar: ./usr/share/locale/et: time stamp 2026-11-29 07:46:26 is 33987985.826745943 s in the future tar: ./usr/share/locale/zh_CN/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.82671995 s in the future tar: ./usr/share/locale/zh_CN: time stamp 2026-11-29 07:46:26 is 33987985.82669658 s in the future tar: ./usr/share/locale/nl/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826671203 s in the future tar: ./usr/share/locale/nl: time stamp 2026-11-29 07:46:26 is 33987985.826649274 s in the future tar: ./usr/share/locale/sr/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.82662491 s in the future tar: ./usr/share/locale/sr: time stamp 2026-11-29 07:46:26 is 33987985.826602684 s in the future tar: ./usr/share/locale/pt/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826577114 s in the future tar: ./usr/share/locale/pt: time stamp 2026-11-29 07:46:26 is 33987985.82655352 s in the future tar: ./usr/share/locale/uk/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826526227 s in the future tar: ./usr/share/locale/uk: time stamp 2026-11-29 07:46:26 is 33987985.826502468 s in the future tar: ./usr/share/locale/id/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826477153 s in the future tar: ./usr/share/locale/id: time stamp 2026-11-29 07:46:26 is 33987985.82645274 s in the future tar: ./usr/share/locale/fi/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826426421 s in the future tar: ./usr/share/locale/fi: time stamp 2026-11-29 07:46:26 is 33987985.826403354 s in the future tar: ./usr/share/locale/fr/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826376812 s in the future tar: ./usr/share/locale/fr: time stamp 2026-11-29 07:46:26 is 33987985.82635306 s in the future tar: ./usr/share/locale: time stamp 2026-11-29 07:51:38 is 33988297.826329883 s in the future tar: ./usr/share/man/sl/man1: time stamp 2026-11-29 07:46:39 is 33987998.826302887 s in the future tar: ./usr/share/man/cs/man8: time stamp 2026-11-29 07:52:01 is 33988320.826257676 s in the future tar: ./usr/share/man/cs: time stamp 2026-11-29 07:51:34 is 33988293.826234513 s in the future tar: ./usr/share/man/it/man1: time stamp 2026-11-29 07:51:39 is 33988298.826209535 s in the future tar: ./usr/share/man/it/man8: time stamp 2026-11-30 23:31:29 is 34131088.826185437 s in the future tar: ./usr/share/man/it: time stamp 2026-11-29 07:46:27 is 33987986.826162836 s in the future tar: ./usr/share/man/ja/man1: time stamp 2026-11-29 07:51:34 is 33988293.826138138 s in the future tar: ./usr/share/man/ja/man8: time stamp 2026-11-30 23:31:29 is 34131088.826113457 s in the future tar: ./usr/share/man/ja: time stamp 2026-11-29 07:46:27 is 33987986.826090967 s in the future tar: ./usr/share/man/gl/man8: time stamp 2026-11-29 07:52:01 is 33988320.826067648 s in the future tar: ./usr/share/man/gl: time stamp 2026-11-29 07:51:39 is 33988298.826045452 s in the future tar: ./usr/share/man/pl/man1: time stamp 2026-11-29 07:51:34 is 33988293.826020584 s in the future tar: ./usr/share/man/pl/man8: time stamp 2026-11-30 23:31:29 is 34131088.825995775 s in the future tar: ./usr/share/man/pl: time stamp 2026-11-29 07:46:27 is 33987986.825972535 s in the future tar: ./usr/share/man/man1: time stamp 2026-12-02 23:31:24 is 34303883.825946194 s in the future tar: ./usr/share/man/man8: time stamp 2026-12-02 20:29:29 is 34292968.825921339 s in the future tar: ./usr/share/man/de/man1: time stamp 2026-11-30 23:31:29 is 34131088.825896425 s in the future tar: ./usr/share/man/de/man8: time stamp 2026-11-30 23:31:29 is 34131088.825871747 s in the future tar: ./usr/share/man/de: time stamp 2026-11-29 07:46:41 is 33988000.825845853 s in the future tar: ./usr/share/man/es/man1: time stamp 2026-11-29 07:52:00 is 33988319.825819033 s in the future tar: ./usr/share/man/es/man8: time stamp 2026-11-30 23:31:29 is 34131088.825795027 s in the future tar: ./usr/share/man/es: time stamp 2026-11-29 07:46:27 is 33987986.825771762 s in the future tar: ./usr/share/man/sv/man1: time stamp 2026-11-29 07:52:00 is 33988319.825747357 s in the future tar: ./usr/share/man/sv: time stamp 2026-11-29 07:46:47 is 33988006.825722007 s in the future tar: ./usr/share/man/man7: time stamp 2026-11-30 23:31:29 is 34131088.82569727 s in the future tar: ./usr/share/man/fi/man8: time stamp 2026-11-29 07:52:01 is 33988320.825672602 s in the future tar: ./usr/share/man/fi: time stamp 2026-11-29 07:51:39 is 33988298.825648425 s in the future tar: ./usr/share/man/fr/man1: time stamp 2026-11-30 23:31:29 is 34131088.82562305 s in the future tar: ./usr/share/man/fr/man8: time stamp 2026-11-30 23:31:29 is 34131088.82559807 s in the future tar: ./usr/share/man/fr: time stamp 2026-11-29 07:46:41 is 33988000.825575316 s in the future tar: ./usr/share/man: time stamp 2026-11-29 07:51:39 is 33988298.825552899 s in the future tar: ./usr/share: time stamp 2026-11-29 07:51:42 is 33988301.825529401 s in the future tar: ./usr: time stamp 2026-11-29 07:46:28 is 33987987.825507593 s in the future tar: ./etc/systemd/system/timers.target.wants: time stamp 2026-11-29 07:50:27 is 33988226.825465647 s in the future tar: ./etc/systemd/system: time stamp 2026-11-29 07:46:29 is 33987988.825442521 s in the future tar: ./etc/alternatives: time stamp 2026-11-29 07:52:01 is 33988320.825403044 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [drop-seq_3.0.2+dfsg-2.dsc] I: copying [./drop-seq_3.0.2+dfsg.orig.tar.xz] I: copying [./drop-seq_3.0.2+dfsg-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./drop-seq_3.0.2+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting drop-seq in drop-seq-3.0.2+dfsg dpkg-source: info: unpacking drop-seq_3.0.2+dfsg.orig.tar.xz dpkg-source: info: unpacking drop-seq_3.0.2+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying no_git.patch dpkg-source: info: applying debian_packaged_libs.patch dpkg-source: info: applying link_excluded_file.patch dpkg-source: info: applying paths_in_scripts.patch dpkg-source: info: applying no_google_api_gax.patch dpkg-source: info: applying openjdk_21_syntax.patch dpkg-source: info: applying put_defs_sh_out_of_path.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Oct 31 08:40 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=forky EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=941046cb9e854f0da672c895624bdd71 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=894406 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_Nm7r --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2 --logfile b2/build.log drop-seq_3.0.2+dfsg-2.dsc' SUDO_GID=111 SUDO_HOME=/var/lib/jenkins SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), javahelper, default-jdk-headless, libbiojava6-java, libhtsjdk-java, libpicard-java, libcommons-collections4-java, libcommons-lang-java, libguava-java, libyaml-snake-java, libla4j-java, libjcommander-java, junit4, testng dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on javahelper; however: Package javahelper is not installed. pbuilder-satisfydepends-dummy depends on default-jdk-headless; however: Package default-jdk-headless is not installed. pbuilder-satisfydepends-dummy depends on libbiojava6-java; however: Package libbiojava6-java is not installed. pbuilder-satisfydepends-dummy depends on libhtsjdk-java; however: Package libhtsjdk-java is not installed. pbuilder-satisfydepends-dummy depends on libpicard-java; however: Package libpicard-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-collections4-java; however: Package libcommons-collections4-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-lang-java; however: Package libcommons-lang-java is not installed. pbuilder-satisfydepends-dummy depends on libguava-java; however: Package libguava-java is not installed. pbuilder-satisfydepends-dummy depends on libyaml-snake-java; however: Package libyaml-snake-java is not installed. pbuilder-satisfydepends-dummy depends on libla4j-java; however: Package libla4j-java is not installed. pbuilder-satisfydepends-dummy depends on libjcommander-java; however: Package libjcommander-java is not installed. pbuilder-satisfydepends-dummy depends on junit4; however: Package junit4 is not installed. pbuilder-satisfydepends-dummy depends on testng; however: Package testng is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: ant{a} ant-optional{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} fastjar{a} file{a} gettext{a} gettext-base{a} gpg{a} gpg-agent{a} gpgconf{a} groff-base{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} junit4{a} libactivation-java{a} libantlr4-runtime-java{a} libaopalliance-java{a} libapache-pom-java{a} libapfloat-java{a} libarchive-zip-perl{a} libargs4j-java{a} libasm-java{a} libassuan9{a} libatinject-jsr330-api-java{a} libb-hooks-op-check-perl{a} libbarclay-java{a} libbiojava6-java{a} libbsh-java{a} libcdi-api-java{a} libciftools-java{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcodemodel-java{a} libcommons-beanutils-java{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-collections3-java{a} libcommons-collections4-java{a} libcommons-compress-java{a} libcommons-exec-java{a} libcommons-io-java{a} libcommons-jexl2-java{a} libcommons-lang-java{a} libcommons-lang3-java{a} libcommons-logging-java{a} libcommons-math-java{a} libcommons-math3-java{a} libcommons-parent-java{a} libcommons-text-java{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdom4j-java{a} libdtd-parser-java{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} liberror-prone-java{a} libexec-maven-plugin-java{a} libexpat1{a} libezmorph-java{a} libfastinfoset-java{a} libfastutil-java{a} libffi8{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfreemarker-java{a} libgatk-native-bindings-java{a} libgcrypt20{a} libgeronimo-annotation-1.3-spec-java{a} libgeronimo-interceptor-3.0-spec-java{a} libgkl-java{a} libgoogle-gson-java{a} libgpg-error0{a} libguava-java{a} libguice-java{a} libhamcrest-java{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhtsjdk-java{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhttpclient-java{a} libhttpcore-java{a} libimport-into-perl{a} libinchi1.07{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libistack-commons-java{a} libitext5-java{a} libjackson2-annotations-java{a} libjackson2-core-java{a} libjackson2-databind-java{a} libjaxb-api-java{a} libjaxb-java{a} libjaxen-java{a} libjcommander-java{a} libjgrapht-java{a} libjgraphx-java{a} libjheaps-java{a} libjmol-java{a} libjni-inchi-java{a} libjni-inchi-jni{a} libjoptsimple-java{a} libjpeg62-turbo{a} libjson-java{a} libjson-simple-java{a} libjsoup-java{a} libjsr305-java{a} libksba8{a} libla4j-java{a} liblcms2-2{a} liblightcouch-java{a} liblog4j1.2-java{a} liblog4j2-java{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmaven-archiver-java{a} libmaven-compiler-plugin-java{a} libmaven-file-management-java{a} libmaven-jar-plugin-java{a} libmaven-parent-java{a} libmaven-resolver-java{a} libmaven-shared-incremental-java{a} libmaven-shared-io-java{a} libmaven-shared-utils-java{a} libmaven3-core-java{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmmtf-java{a} libmodule-runtime-perl{a} libmongodb-java{a} libmoo-perl{a} libmsgpack-java{a} libnaga-java{a} libncbi-ngs3{a} libncbi-vdb3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libngs-java{a} libngs-jni{a} libnpth0t64{a} libnspr4{a} libnss3{a} libparams-classify-perl{a} libpcsclite1{a} libpicard-java{a} libpipeline1{a} libplexus-archiver-java{a} libplexus-cipher-java{a} libplexus-classworlds-java{a} libplexus-compiler-java{a} libplexus-component-annotations-java{a} libplexus-container-default-java{a} libplexus-interpolation-java{a} libplexus-io-java{a} libplexus-languages-java{a} libplexus-sec-dispatcher-java{a} libplexus-utils2-java{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqdox2-java{a} libreadline8t64{a} librelaxng-datatype-java{a} librhino-java{a} librngom-java{a} librole-tiny-perl{a} libsisu-inject-java{a} libsisu-plexus-java{a} libslf4j-java{a} libsnappy-java{a} libsnappy-jni{a} libsnappy1v5{a} libstax-ex-java{a} libstreambuffer-java{a} libsub-quote-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libtxw2-java{a} libuchardet0{a} libunistring5{a} liburi-perl{a} libvecmath-java{a} libwagon-http-java{a} libwagon-provider-api-java{a} libwww-perl{a} libwww-robotrules-perl{a} libxbean-reflect-java{a} libxerces2-java{a} libxml-commons-external-java{a} libxml-commons-resolver1.1-java{a} libxml2-16{a} libxom-java{a} libxsom-java{a} libxz-java{a} libyaml-snake-java{a} m4{a} man-db{a} media-types{a} ncbi-vdb-data{a} netbase{a} openjdk-21-jdk-headless{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} python3{a} python3-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} rsopv{a} sensible-utils{a} testng{a} tzdata{a} wdiff{a} The following packages are RECOMMENDED but will NOT be installed: curl debian-keyring debian-tag2upload-keyring dput dput-ng dupload equivs git-debpush gnupg libarchive-cpio-perl libasound2t64 libcups2t64 libdata-dump-perl libdistro-info-perl libfontconfig1 libfreetype6 libgitlab-api-v4-perl libgkl-jni libgpg-error-l10n libharfbuzz0b libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjansi-java libjson-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmetacpan-client-perl libnamespace-clean-perl liboss4-salsa-asound2 libsoap-lite-perl libstring-shellquote-perl libxstring-perl licensecheck lintian lynx lzip pristine-tar python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg r-base-core strace unzip wget 0 packages upgraded, 248 newly installed, 0 to remove and 0 not upgraded. Need to get 246 MB of archives. After unpacking 516 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 2 http://deb.debian.org/debian forky/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get: 3 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Get: 4 http://deb.debian.org/debian forky/main amd64 libpython3.13-minimal amd64 3.13.9-1 [865 kB] Get: 5 http://deb.debian.org/debian forky/main amd64 python3.13-minimal amd64 3.13.9-1 [2257 kB] Get: 6 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Get: 7 http://deb.debian.org/debian forky/main amd64 media-types all 14.0.0 [30.8 kB] Get: 8 http://deb.debian.org/debian forky/main amd64 netbase all 6.5 [12.4 kB] Get: 9 http://deb.debian.org/debian forky/main amd64 tzdata all 2025b-5 [260 kB] Get: 10 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Get: 11 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-3 [74.8 kB] Get: 12 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Get: 13 http://deb.debian.org/debian forky/main amd64 libpython3.13-stdlib amd64 3.13.9-1 [1965 kB] Get: 14 http://deb.debian.org/debian forky/main amd64 python3.13 amd64 3.13.9-1 [764 kB] Get: 15 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Get: 16 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Get: 17 http://deb.debian.org/debian forky/main amd64 sensible-utils all 0.0.26 [27.0 kB] Get: 18 http://deb.debian.org/debian forky/main amd64 openssl amd64 3.5.4-1 [1496 kB] Get: 19 http://deb.debian.org/debian forky/main amd64 ca-certificates all 20250419 [162 kB] Get: 20 http://deb.debian.org/debian forky/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get: 21 http://deb.debian.org/debian forky/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get: 22 http://deb.debian.org/debian forky/main amd64 file amd64 1:5.46-5 [43.6 kB] Get: 23 http://deb.debian.org/debian forky/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Get: 24 http://deb.debian.org/debian forky/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Get: 25 http://deb.debian.org/debian forky/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Get: 26 http://deb.debian.org/debian forky/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Get: 27 http://deb.debian.org/debian forky/main amd64 man-db amd64 2.13.1-1 [1469 kB] Get: 28 http://deb.debian.org/debian forky/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get: 29 http://deb.debian.org/debian forky/main amd64 java-common all 0.76 [6776 B] Get: 30 http://deb.debian.org/debian forky/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 31 http://deb.debian.org/debian forky/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Get: 32 http://deb.debian.org/debian forky/main amd64 libnspr4 amd64 2:4.37-1 [111 kB] Get: 33 http://deb.debian.org/debian forky/main amd64 libnss3 amd64 2:3.117-1 [1429 kB] Get: 34 http://deb.debian.org/debian forky/main amd64 libpcsclite1 amd64 2.4.0-1 [55.7 kB] Get: 35 http://deb.debian.org/debian forky/main amd64 openjdk-21-jre-headless amd64 21.0.9+10-1 [41.9 MB] Get: 36 http://deb.debian.org/debian forky/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get: 37 http://deb.debian.org/debian forky/main amd64 ant all 1.10.15-1 [2163 kB] Get: 38 http://deb.debian.org/debian forky/main amd64 ant-optional all 1.10.15-1 [456 kB] Get: 39 http://deb.debian.org/debian forky/main amd64 m4 amd64 1.4.20-2 [325 kB] Get: 40 http://deb.debian.org/debian forky/main amd64 autoconf all 2.72-3.1 [494 kB] Get: 41 http://deb.debian.org/debian forky/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get: 42 http://deb.debian.org/debian forky/main amd64 automake all 1:1.18.1-2 [877 kB] Get: 43 http://deb.debian.org/debian forky/main amd64 autopoint all 0.23.1-2 [770 kB] Get: 44 http://deb.debian.org/debian forky/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 45 http://deb.debian.org/debian forky/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Get: 46 http://deb.debian.org/debian forky/main amd64 libtool all 2.5.4-7 [540 kB] Get: 47 http://deb.debian.org/debian forky/main amd64 dh-autoreconf all 21 [12.2 kB] Get: 48 http://deb.debian.org/debian forky/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 49 http://deb.debian.org/debian forky/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 50 http://deb.debian.org/debian forky/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 51 http://deb.debian.org/debian forky/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Get: 52 http://deb.debian.org/debian forky/main amd64 dwz amd64 0.16-2 [108 kB] Get: 53 http://deb.debian.org/debian forky/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get: 54 http://deb.debian.org/debian forky/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Get: 55 http://deb.debian.org/debian forky/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Get: 56 http://deb.debian.org/debian forky/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 57 http://deb.debian.org/debian forky/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 58 http://deb.debian.org/debian forky/main amd64 debhelper all 13.28 [941 kB] Get: 59 http://deb.debian.org/debian forky/main amd64 openjdk-21-jdk-headless amd64 21.0.9+10-1 [83.0 MB] Get: 60 http://deb.debian.org/debian forky/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get: 61 http://deb.debian.org/debian forky/main amd64 libgpg-error0 amd64 1.56-2 [89.1 kB] Get: 62 http://deb.debian.org/debian forky/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB] Get: 63 http://deb.debian.org/debian forky/main amd64 libgcrypt20 amd64 1.11.2-2 [865 kB] Get: 64 http://deb.debian.org/debian forky/main amd64 gpgconf amd64 2.4.8-4 [129 kB] Get: 65 http://deb.debian.org/debian forky/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get: 66 http://deb.debian.org/debian forky/main amd64 libnpth0t64 amd64 1.8-3 [23.2 kB] Get: 67 http://deb.debian.org/debian forky/main amd64 gpg amd64 2.4.8-4 [639 kB] Get: 68 http://deb.debian.org/debian forky/main amd64 pinentry-curses amd64 1.3.2-3 [87.8 kB] Get: 69 http://deb.debian.org/debian forky/main amd64 gpg-agent amd64 2.4.8-4 [273 kB] Get: 70 http://deb.debian.org/debian forky/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B] Get: 71 http://deb.debian.org/debian forky/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 72 http://deb.debian.org/debian forky/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 73 http://deb.debian.org/debian forky/main amd64 libfile-touch-perl all 0.12-2 [8816 B] Get: 74 http://deb.debian.org/debian forky/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get: 75 http://deb.debian.org/debian forky/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get: 76 http://deb.debian.org/debian forky/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB] Get: 77 http://deb.debian.org/debian forky/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get: 78 http://deb.debian.org/debian forky/main amd64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get: 79 http://deb.debian.org/debian forky/main amd64 libdevel-callchecker-perl amd64 0.009-2 [15.6 kB] Get: 80 http://deb.debian.org/debian forky/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get: 81 http://deb.debian.org/debian forky/main amd64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get: 82 http://deb.debian.org/debian forky/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get: 83 http://deb.debian.org/debian forky/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 84 http://deb.debian.org/debian forky/main amd64 libsub-quote-perl all 2.006009-1 [21.3 kB] Get: 85 http://deb.debian.org/debian forky/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get: 86 http://deb.debian.org/debian forky/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 87 http://deb.debian.org/debian forky/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 88 http://deb.debian.org/debian forky/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 89 http://deb.debian.org/debian forky/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 90 http://deb.debian.org/debian forky/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 91 http://deb.debian.org/debian forky/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 92 http://deb.debian.org/debian forky/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get: 93 http://deb.debian.org/debian forky/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 94 http://deb.debian.org/debian forky/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 95 http://deb.debian.org/debian forky/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 96 http://deb.debian.org/debian forky/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 97 http://deb.debian.org/debian forky/main amd64 libhttp-message-perl all 7.01-1 [80.0 kB] Get: 98 http://deb.debian.org/debian forky/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 99 http://deb.debian.org/debian forky/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 100 http://deb.debian.org/debian forky/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 101 http://deb.debian.org/debian forky/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB] Get: 102 http://deb.debian.org/debian forky/main amd64 libio-socket-ssl-perl all 2.095-1 [226 kB] Get: 103 http://deb.debian.org/debian forky/main amd64 libnet-http-perl all 6.24-1 [23.2 kB] Get: 104 http://deb.debian.org/debian forky/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 105 http://deb.debian.org/debian forky/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 106 http://deb.debian.org/debian forky/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 107 http://deb.debian.org/debian forky/main amd64 libwww-perl all 6.81-1 [186 kB] Get: 108 http://deb.debian.org/debian forky/main amd64 patchutils amd64 0.4.3-1 [79.1 kB] Get: 109 http://deb.debian.org/debian forky/main amd64 rsopv amd64 0.6.4-1 [1385 kB] Get: 110 http://deb.debian.org/debian forky/main amd64 wdiff amd64 1.2.2-9 [122 kB] Get: 111 http://deb.debian.org/debian forky/main amd64 devscripts all 2.25.22 [1046 kB] Get: 112 http://deb.debian.org/debian forky/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get: 113 http://deb.debian.org/debian forky/main amd64 jarwrapper all 0.81 [9784 B] Get: 114 http://deb.debian.org/debian forky/main amd64 javahelper all 0.81 [79.4 kB] Get: 115 http://deb.debian.org/debian forky/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get: 116 http://deb.debian.org/debian forky/main amd64 junit4 all 4.13.2-5 [350 kB] Get: 117 http://deb.debian.org/debian forky/main amd64 libactivation-java all 1.2.0-2 [84.7 kB] Get: 118 http://deb.debian.org/debian forky/main amd64 libantlr4-runtime-java all 4.9.2-3 [318 kB] Get: 119 http://deb.debian.org/debian forky/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get: 120 http://deb.debian.org/debian forky/main amd64 libapache-pom-java all 33-2 [5852 B] Get: 121 http://deb.debian.org/debian forky/main amd64 libapfloat-java all 1.14.0-2 [725 kB] Get: 122 http://deb.debian.org/debian forky/main amd64 libargs4j-java all 2.33-2 [138 kB] Get: 123 http://deb.debian.org/debian forky/main amd64 libasm-java all 9.8-2 [391 kB] Get: 124 http://deb.debian.org/debian forky/main amd64 libatinject-jsr330-api-java all 1.0+ds1-6 [5112 B] Get: 125 http://deb.debian.org/debian forky/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get: 126 http://deb.debian.org/debian forky/main amd64 libcommons-lang3-java all 3.17.0-2 [641 kB] Get: 127 http://deb.debian.org/debian forky/main amd64 libfreemarker-java all 2.3.32-2.1 [1525 kB] Get: 128 http://deb.debian.org/debian forky/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get: 129 http://deb.debian.org/debian forky/main amd64 libjoptsimple-java all 5.0.4-7 [73.7 kB] Get: 130 http://deb.debian.org/debian forky/main amd64 libcommons-codec-java all 1.18.0-1 [304 kB] Get: 131 http://deb.debian.org/debian forky/main amd64 libcommons-logging-java all 1.3.0-2 [68.6 kB] Get: 132 http://deb.debian.org/debian forky/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get: 133 http://deb.debian.org/debian forky/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get: 134 http://deb.debian.org/debian forky/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get: 135 http://deb.debian.org/debian forky/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get: 136 http://deb.debian.org/debian forky/main amd64 libslf4j-java all 1.7.32-2 [142 kB] Get: 137 http://deb.debian.org/debian forky/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get: 138 http://deb.debian.org/debian forky/main amd64 libbarclay-java all 6.0.0+dfsg-1 [110 kB] Get: 139 http://deb.debian.org/debian forky/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get: 140 http://deb.debian.org/debian forky/main amd64 libciftools-java all 7.0.1-1 [2228 kB] Get: 141 http://deb.debian.org/debian forky/main amd64 libcommons-math-java all 2.2-9 [933 kB] Get: 142 http://deb.debian.org/debian forky/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get: 143 http://deb.debian.org/debian forky/main amd64 libjsr305-java all 0.1~+svn49-12 [26.6 kB] Get: 144 http://deb.debian.org/debian forky/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get: 145 http://deb.debian.org/debian forky/main amd64 libitext5-java all 5.5.13.3-4 [2667 kB] Get: 146 http://deb.debian.org/debian forky/main amd64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB] Get: 147 http://deb.debian.org/debian forky/main amd64 libjackson2-core-java all 2.14.1-1 [447 kB] Get: 148 http://deb.debian.org/debian forky/main amd64 libjackson2-databind-java all 2.14.0+ds-1 [1532 kB] Get: 149 http://deb.debian.org/debian forky/main amd64 libjaxb-api-java all 2.3.1-1 [119 kB] Get: 150 http://deb.debian.org/debian forky/main amd64 libjaxen-java all 1.2.0-1 [214 kB] Get: 151 http://deb.debian.org/debian forky/main amd64 libdom4j-java all 2.1.4-1 [312 kB] Get: 152 http://deb.debian.org/debian forky/main amd64 libcommons-io-java all 2.19.0-1 [524 kB] Get: 153 http://deb.debian.org/debian forky/main amd64 libmaven-shared-utils-java all 3.4.2-1 [137 kB] Get: 154 http://deb.debian.org/debian forky/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get: 155 http://deb.debian.org/debian forky/main amd64 libguice-java all 5.1.0-1 [932 kB] Get: 156 http://deb.debian.org/debian forky/main amd64 libmaven-parent-java all 43-2 [6252 B] Get: 157 http://deb.debian.org/debian forky/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get: 158 http://deb.debian.org/debian forky/main amd64 libwagon-provider-api-java all 3.5.3-2 [48.3 kB] Get: 159 http://deb.debian.org/debian forky/main amd64 libmaven-resolver-java all 1.9.22-1 [729 kB] Get: 160 http://deb.debian.org/debian 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http://deb.debian.org/debian forky/main amd64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB] Get: 171 http://deb.debian.org/debian forky/main amd64 libmaven-file-management-java all 3.0.0-2 [35.1 kB] Get: 172 http://deb.debian.org/debian forky/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get: 173 http://deb.debian.org/debian forky/main amd64 libplexus-io-java all 3.3.1-2 [65.3 kB] Get: 174 http://deb.debian.org/debian forky/main amd64 libsnappy1v5 amd64 1.2.2-2 [30.7 kB] Get: 175 http://deb.debian.org/debian forky/main amd64 libsnappy-jni amd64 1.1.10.8-1 [6548 B] Get: 176 http://deb.debian.org/debian forky/main amd64 libsnappy-java all 1.1.10.8-1 [87.8 kB] Get: 177 http://deb.debian.org/debian forky/main amd64 libxz-java all 1.9-1 [143 kB] Get: 178 http://deb.debian.org/debian forky/main amd64 libplexus-archiver-java all 4.6.1-1 [187 kB] Get: 179 http://deb.debian.org/debian forky/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get: 180 http://deb.debian.org/debian forky/main amd64 libwagon-http-java all 3.5.3-2 [49.6 kB] Get: 181 http://deb.debian.org/debian forky/main amd64 libistack-commons-java all 3.0.6-5 [145 kB] Get: 182 http://deb.debian.org/debian forky/main amd64 libcodemodel-java all 2.6+jaxb2.3.0.1-11 [164 kB] Get: 183 http://deb.debian.org/debian forky/main amd64 librelaxng-datatype-java all 1.0+ds1-4 [11.8 kB] Get: 184 http://deb.debian.org/debian forky/main amd64 librngom-java all 2.3.0.1-11 [292 kB] Get: 185 http://deb.debian.org/debian forky/main amd64 libxsom-java all 2.3.0.1-11 [401 kB] Get: 186 http://deb.debian.org/debian forky/main amd64 libtxw2-java all 2.3.0.1-11 [134 kB] Get: 187 http://deb.debian.org/debian forky/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get: 188 http://deb.debian.org/debian forky/main amd64 libdtd-parser-java all 1.2-1 [64.9 kB] Get: 189 http://deb.debian.org/debian forky/main amd64 libstax-ex-java all 1.7.8-3 [40.9 kB] Get: 190 http://deb.debian.org/debian forky/main amd64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB] Get: 191 http://deb.debian.org/debian forky/main amd64 libfastinfoset-java all 1.2.12-4 [347 kB] Get: 192 http://deb.debian.org/debian forky/main amd64 libjaxb-java all 2.3.0.1-11 [1980 kB] Get: 193 http://deb.debian.org/debian forky/main amd64 libmaven-archiver-java all 3.6.2-1 [26.1 kB] Get: 194 http://deb.debian.org/debian forky/main amd64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB] Get: 195 http://deb.debian.org/debian forky/main amd64 libcommons-text-java all 1.13.1-1 [228 kB] Get: 196 http://deb.debian.org/debian forky/main amd64 libfastutil-java all 8.5.16+dfsg-1 [20.2 MB] Get: 197 http://deb.debian.org/debian forky/main amd64 libjheaps-java all 0.14-3 [146 kB] Get: 198 http://deb.debian.org/debian forky/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get: 199 http://deb.debian.org/debian forky/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get: 200 http://deb.debian.org/debian forky/main amd64 libjgraphx-java all 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2.13.0-1 [99.5 kB] Get: 211 http://deb.debian.org/debian forky/main amd64 libqdox2-java all 2.0.3-1 [296 kB] Get: 212 http://deb.debian.org/debian forky/main amd64 libplexus-languages-java all 1.1.1-3 [47.8 kB] Get: 213 http://deb.debian.org/debian forky/main amd64 libmaven-compiler-plugin-java all 3.13.0-1 [78.8 kB] Get: 214 http://deb.debian.org/debian forky/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get: 215 http://deb.debian.org/debian forky/main amd64 libjni-inchi-java all 0.8+dfsg-8 [33.6 kB] Get: 216 http://deb.debian.org/debian forky/main amd64 libnaga-java all 3.0+svn80-5 [43.5 kB] Get: 217 http://deb.debian.org/debian forky/main amd64 libjmol-java all 16.2.33+dfsg-1 [10.4 MB] Get: 218 http://deb.debian.org/debian forky/main amd64 libjson-simple-java all 2.3.0-2 [61.7 kB] Get: 219 http://deb.debian.org/debian forky/main amd64 libmsgpack-java all 0.9.6-1 [161 kB] Get: 220 http://deb.debian.org/debian forky/main amd64 libmmtf-java all 1.0.11-1 [187 kB] Get: 221 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all 1.7.15-1 [1382 kB] Get: 242 http://deb.debian.org/debian forky/main amd64 libhtsjdk-java all 4.1.3+dfsg-2 [1841 kB] Get: 243 http://deb.debian.org/debian forky/main amd64 libgkl-java all 0.9.1+dfsg-2 [28.2 kB] Get: 244 http://deb.debian.org/debian forky/main amd64 libjcommander-java all 1.71-4 [73.0 kB] Get: 245 http://deb.debian.org/debian forky/main amd64 libla4j-java all 0.6.0-4 [228 kB] Get: 246 http://deb.debian.org/debian forky/main amd64 libpicard-java all 3.3.0+dfsg-2 [1778 kB] Get: 247 http://deb.debian.org/debian forky/main amd64 libyaml-snake-java all 2.0+ds+really1.33-1 [324 kB] Get: 248 http://deb.debian.org/debian forky/main amd64 testng all 6.9.12-4 [795 kB] Fetched 246 MB in 13s (19.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19869 files and directories currently installed.) Preparing to unpack .../libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package binfmt-support. Preparing to unpack .../binfmt-support_2.2.2-7_amd64.deb ... Unpacking binfmt-support (2.2.2-7) ... Selecting previously unselected package libexpat1:amd64. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.9-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.9-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.9-1_amd64.deb ... Unpacking python3.13 (3.13.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libsnappy-jni (1.1.10.8-1) ... Setting up libezmorph-java (1.0.6-4) ... Setting up readline-common (8.3-3) ... Setting up liburi-perl (5.30-1) ... Setting up libargs4j-java (2.33-2) ... Setting up libfile-touch-perl (0.12-2) ... Setting up dctrl-tools (2.24-3+b1) ... Setting up libnaga-java (3.0+svn80-5) ... Setting up libnet-ssleay-perl:amd64 (1.94-3) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libksba8:amd64 (1.6.7-2+b1) ... Setting up pinentry-curses (1.3.2-3) ... Setting up libdom4j-java (2.1.4-1) ... Setting up libjaxb-api-java (2.3.1-1) ... Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up libwagon-provider-api-java (3.5.3-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libplexus-languages-java (1.1.1-3) ... Setting up jarwrapper (0.81) ... Setting up libtool (2.5.4-7) ... Setting up libstax-ex-java (1.7.8-3) ... Setting up libmaven-parent-java (43-2) ... Setting up libcommons-parent-java (56-1) ... Setting up libcommons-logging-java (1.3.0-2) ... Setting up libnet-http-perl (6.24-1) ... Setting up libsisu-inject-java (0.3.5-1) ... Setting up libnss3:amd64 (2:3.117-1) ... Setting up libciftools-java (7.0.1-1) ... Setting up libxom-java (1.3.9-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-2) ... Setting up libcommons-lang-java (2.6-12) ... Setting up libjackson2-databind-java (2.14.0+ds-1) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up patchutils (0.4.3-1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libsisu-plexus-java (0.3.5-1) ... Setting up libmbedx509-7:amd64 (3.6.4-2) ... Setting up testng (6.9.12-4) ... Setting up libstreambuffer-java (1.5.4-1.1) ... Setting up libcommons-collections4-java (4.4-2) ... Setting up libcommons-lang3-java (3.17.0-2) ... Setting up libmbedtls21:amd64 (3.6.4-2) ... Setting up libreadline8t64:amd64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up librngom-java (2.3.0.1-11) ... Setting up libjni-inchi-jni (0.8+dfsg-8) ... Setting up libjgraphx-java (2.1.0.7-6) ... Setting up groff-base (1.23.0-9) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ... Setting up gpgconf (2.4.8-4) ... Setting up libcommons-beanutils-java (1.10.1-1.1) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libsnappy-java (1.1.10.8-1) ... Setting up libxsom-java (2.3.0.1-11) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-codec-java (1.18.0-1) ... Setting up libpython3.13-stdlib:amd64 (3.13.9-1) ... Setting up libio-socket-ssl-perl (2.095-1) ... Setting up gpg (2.4.8-4) ... Setting up libpython3-stdlib:amd64 (3.13.7-1) ... Setting up libhttp-message-perl (7.01-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up gpg-agent (2.4.8-4) ... Setting up openjdk-21-jre-headless:amd64 (21.0.9+10-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libhttp-cookies-perl (6.11-1) ... Setting up python3.13 (3.13.9-1) ... Setting up libcommons-io-java (2.19.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libncbi-vdb3:amd64 (3.2.1+dfsg-2) ... Setting up python3 (3.13.7-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libmaven-resolver-java (1.9.22-1) ... Setting up libmodule-runtime-perl (0.018-1) ... Setting up libhttpclient-java (4.5.14-1) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libwagon-http-java (3.5.3-2) ... Setting up libmaven-shared-utils-java (3.4.2-1) ... Setting up libfastinfoset-java (1.2.12-4) ... Setting up libncbi-ngs3:amd64 (3.2.1+dfsg-5) ... Setting up libngs-jni:amd64 (3.2.1+dfsg-5) ... Setting up libplexus-io-java (3.3.1-2) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up debhelper (13.28) ... Setting up libplexus-archiver-java (4.6.1-1) ... Setting up libngs-java:amd64 (3.2.1+dfsg-5) ... Setting up libbarclay-java (6.0.0+dfsg-1) ... Setting up libmaven-archiver-java (3.6.2-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libwww-perl (6.81-1) ... Setting up devscripts (2.25.22) ... Setting up libguava-java (32.0.1-1) ... Setting up javahelper (0.81) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up libguice-java (5.1.0-1) ... Setting up libmaven3-core-java (3.9.9-1) ... Setting up libmaven-shared-incremental-java (1.1-6) ... Setting up libmaven-shared-io-java (3.0.0-4) ... Setting up libplexus-compiler-java (2.13.0-1) ... Setting up libmaven-compiler-plugin-java (3.13.0-1) ... Setting up libjni-inchi-java (0.8+dfsg-8) ... Setting up libmaven-file-management-java (3.0.0-2) ... Setting up libjmol-java (16.2.33+dfsg-1) ... Setting up libmaven-jar-plugin-java (3.3.0-2) ... Setting up libcommons-text-java (1.13.1-1) ... Setting up libmsgpack-java (0.9.6-1) ... Setting up libmmtf-java (1.0.11-1) ... Setting up libjgrapht-java (1.5.2-2) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_BR_Root_CA_2_2023.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_2_2023.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up ant (1.10.15-1) ... Setting up junit4 (4.13.2-5) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.9+10-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up ant-optional (1.10.15-1) ... Setting up default-jdk-headless (2:1.21-76) ... Setting up libjson-java (3.2.0+dfsg-2) ... Setting up libhtsjdk-java (4.1.3+dfsg-2) ... Setting up libistack-commons-java (3.0.6-5) ... Setting up libgkl-java (0.9.1+dfsg-2) ... Setting up libpicard-java (3.3.0+dfsg-2) ... Setting up libcodemodel-java (2.6+jaxb2.3.0.1-11) ... Setting up libtxw2-java (2.3.0.1-11) ... Setting up libjaxb-java (2.3.0.1-11) ... Setting up libbiojava6-java (6.1.0+dfsg-6) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/894406/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for forky I: user script /srv/workspace/pbuilder/894406/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/drop-seq-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../drop-seq_3.0.2+dfsg-2_source.changes dpkg-buildpackage: info: source package drop-seq dpkg-buildpackage: info: source version 3.0.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with javahelper jh_clean Duplicate specification "unlink|u" for option "u" debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_clean rm -rf dist lib # Removing .class files created during the build. find . -name "*.class" -delete # Removing classes from testFixtures we put under src/tests. rm -r src/tests/java/org/broadinstitute/dropseqrna/utils rm src/tests/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java rm: cannot remove 'src/tests/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java': No such file or directory make[1]: [debian/rules:56: override_dh_clean] Error 1 (ignored) make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' debian/rules binary dh binary --with javahelper dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_auto_configure mkdir -p lib/test ln -s /usr/share/java/commons-collections4.jar lib/commons-collections4.jar ln -s /usr/share/java/biojava6-alignment.jar lib/biojava6-alignment.jar ln -s /usr/share/java/biojava6-core.jar lib/biojava6-core.jar ln -s /usr/share/java/commons-io.jar lib/commons-io.jar ln -s /usr/share/java/commons-lang.jar lib/commons-lang.jar ln -s /usr/share/java/commons-math3.jar lib/commons-math3.jar ln -s /usr/share/java/htsjdk.jar lib/htsjdk.jar ln -s /usr/share/java/la4j.jar lib/la4j.jar ln -s /usr/share/java/picard.jar lib/picard.jar ln -s /usr/share/java/snakeyaml.jar lib/snakeyaml.jar ln -s /usr/share/java/testng.jar lib/test/testng.jar ln -s /usr/share/java/junit4.jar lib/test/junit.jar # Putting util classes under src/tests so that tests find them. cp -r src/testFixtures/java/org/broadinstitute/dropseqrna/utils src/tests/java/org/broadinstitute/dropseqrna cp -r src/testFixtures/java/org/broadinstitute/dropseqrna/barnyard/DigitalExpressionTestUtil.java src/tests/java/org/broadinstitute/dropseqrna/barnyard make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' jh_linkjars dh_auto_build ant -propertyfile ./debian/ant.properties -Duser.name debian Buildfile: /build/reproducible-path/drop-seq-3.0.2+dfsg/build.xml compile-src: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/classes [javac] Compiling 354 source files to /build/reproducible-path/drop-seq-3.0.2+dfsg/classes [javac] Note: Annotation processing is enabled because one or more processors were found [javac] on the class path. A future release of javac may disable annotation processing [javac] unless at least one processor is specified by name (-processor), or a search [javac] path is specified (--processor-path, --processor-module-path), or annotation [javac] processing is enabled explicitly (-proc:only, -proc:full). [javac] Use -Xlint:-options to suppress this message. [javac] Use -proc:none to disable annotation processing. [javac] warning: Implicitly compiled files were not subject to annotation processing. [javac] Use -proc:none to disable annotation processing or -implicit to specify a policy for implicit compilation. [javac] Note: /build/reproducible-path/drop-seq-3.0.2+dfsg/src/java/org/broadinstitute/dropseqrna/utils/FileListParsingUtils.java uses or overrides a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning compile-tests: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/testclasses [javac] Compiling 122 source files to /build/reproducible-path/drop-seq-3.0.2+dfsg/testclasses [javac] Note: Annotation processing is enabled because one or more processors were found [javac] on the class path. A future release of javac may disable annotation processing [javac] unless at least one processor is specified by name (-processor), or a search [javac] path is specified (--processor-path, --processor-module-path), or annotation [javac] processing is enabled explicitly (-proc:only, -proc:full). [javac] Use -Xlint:-options to suppress this message. [javac] Use -proc:none to disable annotation processing. [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. compile: jar-executable: [mkdir] Created dir: /build/reproducible-path/drop-seq-3.0.2+dfsg/dist [jar] Building jar: /build/reproducible-path/drop-seq-3.0.2+dfsg/dist/dropseq.jar all: BUILD SUCCESSFUL Total time: 7 seconds dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install dh_install jh_installjavadoc dh_installdocs dh_installchangelogs debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_lintian dh_perl dh_link jh_installlibs jh_classpath jh_manifest jh_exec jh_depends dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_fixperms find debian/drop-seq-testdata/usr/share -type f -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'drop-seq-testdata' in '../drop-seq-testdata_3.0.2+dfsg-2_all.deb'. dpkg-deb: building package 'drop-seq-tools' in '../drop-seq-tools_3.0.2+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/894406/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/894406/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/894406 and its subdirectories I: Current time: Fri Oct 31 22:44:56 +14 2025 I: pbuilder-time-stamp: 1761900296 + false + set +x Fri Oct 31 08:44:56 UTC 2025 I: Signing ./b2/drop-seq_3.0.2+dfsg-2_amd64.buildinfo as drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc Fri Oct 31 08:44:56 UTC 2025 I: Signed ./b2/drop-seq_3.0.2+dfsg-2_amd64.buildinfo as ./b2/drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc Fri Oct 31 08:44:56 UTC 2025 - build #2 for drop-seq/forky/amd64 on ionos15-amd64 done. Starting cleanup. All cleanup done. Fri Oct 31 08:44:56 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-o6bMxwCd, removing. /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC: total 132 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:39 b1 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:44 b2 -rw-rw-r-- 1 jenkins jenkins 2393 Oct 2 14:49 drop-seq_3.0.2+dfsg-2.dsc -rw------- 1 jenkins jenkins 115725 Oct 31 08:39 rbuildlog.tZsD6Cw /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1: total 140592 -rw-r--r-- 1 jenkins jenkins 111917 Oct 31 08:39 build.log -rw-r--r-- 1 jenkins jenkins 143009156 Oct 31 08:39 drop-seq-testdata_3.0.2+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 568436 Oct 31 08:39 drop-seq-tools_3.0.2+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 66024 Oct 31 08:39 drop-seq_3.0.2+dfsg-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2393 Oct 31 08:39 drop-seq_3.0.2+dfsg-2.dsc -rw-r--r-- 1 jenkins jenkins 12099 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 12981 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1553 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_amd64.changes -rw-r--r-- 1 jenkins jenkins 1347 Oct 31 08:39 drop-seq_3.0.2+dfsg-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2: total 140704 -rw-rw-r-- 1 jenkins jenkins 387795 Oct 31 08:44 build.log -rw-r--r-- 1 jenkins jenkins 143009156 Oct 31 08:44 drop-seq-testdata_3.0.2+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 568436 Oct 31 08:44 drop-seq-tools_3.0.2+dfsg-2_all.deb -rw-r--r-- 1 jenkins jenkins 66024 Oct 31 08:44 drop-seq_3.0.2+dfsg-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2393 Oct 31 08:44 drop-seq_3.0.2+dfsg-2.dsc -rw-rw-r-- 1 jenkins jenkins 12099 Oct 31 08:44 drop-seq_3.0.2+dfsg-2_amd64.buildinfo -rw-rw-r-- 1 jenkins jenkins 12981 Oct 31 08:44 drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 1553 Oct 31 08:44 drop-seq_3.0.2+dfsg-2_amd64.changes -rw-rw-r-- 1 jenkins jenkins 1347 Oct 31 08:44 drop-seq_3.0.2+dfsg-2_source.changes Fri Oct 31 08:44:58 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Fri Oct 31 08:44:58 UTC 2025 I: drop-seq_3.0.2+dfsg-2_amd64.changes: Format: 1.8 Date: Thu, 02 Oct 2025 16:33:39 +0200 Source: drop-seq Binary: drop-seq-testdata drop-seq-tools Architecture: all Version: 3.0.2+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: drop-seq-testdata - analyzing Drop-seq data (testdata) drop-seq-tools - analyzing Drop-seq data Closes: 1116730 Changes: drop-seq (3.0.2+dfsg-2) unstable; urgency=medium . * Raising Standards version to 4.7.2 (no change) * Removing nocheck indication from the testng B-D (Closes: #1116730) Checksums-Sha1: f2e9f2a8358589a42cb980099d85e95fab8ff463 143009156 drop-seq-testdata_3.0.2+dfsg-2_all.deb 82ab669dd238c0f0ee03a1e130d6e8872714faa0 568436 drop-seq-tools_3.0.2+dfsg-2_all.deb af0e33f64784cbb1e21c02bf7d98b9c5335d2c90 12099 drop-seq_3.0.2+dfsg-2_amd64.buildinfo Checksums-Sha256: 2d27470da572617be6dd655f1f635ad0e71bb616a58968e6450e57036a9a6ad0 143009156 drop-seq-testdata_3.0.2+dfsg-2_all.deb e06914a1ac44f2bf5f714f178e7d0e81d4813da1013c8e744d1784274c0e5d89 568436 drop-seq-tools_3.0.2+dfsg-2_all.deb f56dc413e634412ef7a0d39a062795bb0223022f3142478ce99fde6e5125811c 12099 drop-seq_3.0.2+dfsg-2_amd64.buildinfo Files: aadae4c6876cf09af586c265b78e8832 143009156 science optional drop-seq-testdata_3.0.2+dfsg-2_all.deb e02448c3242cb3b72ba8dc7930730aef 568436 science optional drop-seq-tools_3.0.2+dfsg-2_all.deb 5e95b62dbed86c5953bfb5a6a16ff418 12099 science optional drop-seq_3.0.2+dfsg-2_amd64.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/drop-seq_3.0.2+dfsg-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/drop-seq_3.0.2+dfsg-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/drop-seq_3.0.2+dfsg-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/drop-seq_3.0.2+dfsg-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/amd64/drop-seq_3.0.2+dfsg-2_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/drop-seq_3.0.2+dfsg-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-10-31 08:39:41.297069027 +0000 +++ b2/build.log 2025-10-31 08:44:57.813435174 +0000 @@ -1,8 +1,2550 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Oct 30 20:36:34 -12 2025 -I: pbuilder-time-stamp: 1761899794 +I: Current time: Fri Oct 31 22:39:47 +14 2025 +I: pbuilder-time-stamp: 1761899987 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] +tar: ./build: time stamp 2026-11-29 07:50:53 is 33988263.018449832 s in the future +tar: ./dev/ptmx: time stamp 2026-11-29 07:46:28 is 33987998.018265675 s in the future +tar: ./dev/zero: time stamp 2026-11-29 07:46:28 is 33987998.01815812 s in the future +tar: ./dev/null: time stamp 2026-11-29 07:46:28 is 33987998.018112064 s in the future +tar: ./dev/console: time stamp 2026-11-29 07:46:28 is 33987998.018040881 s in the future +tar: ./dev/random: time stamp 2026-11-29 07:46:28 is 33987998.017992996 s in the future +tar: ./dev/full: time stamp 2026-11-29 07:46:28 is 33987998.017949799 s in the future +tar: ./dev/pts: time stamp 2026-11-29 07:46:28 is 33987998.017877765 s in the future +tar: ./dev/tty: time stamp 2026-11-29 07:46:28 is 33987998.017796114 s in the future +tar: ./dev/urandom: time stamp 2026-11-29 07:46:28 is 33987998.017749406 s in the future +tar: ./etc/terminfo: time stamp 2026-11-29 07:46:38 is 33988008.016810572 s in the future +tar: ./etc/opt: time stamp 2026-11-29 07:46:28 is 33987998.01533396 s in the future +tar: ./etc/security/opasswd: time stamp 2026-11-29 07:46:40 is 33988010.014399102 s in the future +tar: ./etc/security: time stamp 2026-11-29 07:46:40 is 33988010.014068523 s in the future +tar: ./etc/shadow: time stamp 2026-11-29 07:51:36 is 33988306.013904228 s in the future +tar: ./etc/cron.daily: time stamp 2026-11-30 23:31:29 is 34131099.013727624 s in the future +tar: ./etc/apt/apt.conf.d/80proxy: time stamp 2026-11-29 07:52:40 is 33988370.013548385 s in the future +tar: ./etc/apt/apt.conf.d/15pbuilder: time stamp 2026-11-29 07:50:53 is 33988263.013485194 s in the future +tar: ./etc/apt/apt.conf.d: time stamp 2026-11-30 23:31:29 is 34131099.013380675 s in the future +tar: ./etc/apt/sources.list: time stamp 2026-11-29 07:52:40 is 33988370.013276722 s in the future +tar: ./etc/apt/trusted.gpg.d: time stamp 2026-11-29 07:50:07 is 33988217.01214444 s in the future +tar: ./etc/apt: time stamp 2026-11-29 07:52:40 is 33988370.012056102 s in the future +tar: ./etc/fstab: time stamp 2026-11-29 07:46:28 is 33987998.012001125 s in the future +tar: ./etc/update-motd.d: time stamp 2026-11-29 07:46:39 is 33988009.011446157 s in the future +tar: ./etc/ld.so.conf.d: time stamp 2026-11-29 07:52:00 is 33988330.011163556 s in the future +tar: ./etc/gshadow: time stamp 2026-11-29 07:51:36 is 33988306.011036226 s in the future +tar: ./etc/shells: time stamp 2026-11-29 07:46:39 is 33988009.010975375 s in the future +tar: ./etc/default: time stamp 2026-11-29 07:51:35 is 33988305.010724117 s in the future +tar: ./etc/group: time stamp 2026-11-29 07:51:36 is 33988306.010651 s in the future +tar: ./etc/ld.so.cache: time stamp 2026-12-02 23:31:27 is 34303897.01051568 s in the future +tar: ./etc/.pwd.lock: time stamp 2026-11-29 07:51:36 is 33988306.010401902 s in the future +tar: ./etc/skel: time stamp 2026-11-29 07:46:39 is 33988009.010212142 s in the future +tar: ./etc/group-: time stamp 2026-11-29 07:46:28 is 33987998.010128015 s in the future +tar: ./etc/subuid: time stamp 2026-11-29 07:46:28 is 33987998.0100908 s in the future +tar: ./etc/logrotate.d: time stamp 2026-11-30 23:31:29 is 34131099.009586346 s in the future +tar: ./etc/pam.d/common-session: time stamp 2026-11-29 07:46:40 is 33988010.009440396 s in the future +tar: ./etc/pam.d/common-password: time stamp 2026-11-29 07:46:40 is 33988010.009347707 s in the future +tar: ./etc/pam.d/common-account: time stamp 2026-11-29 07:46:40 is 33988010.009237572 s in the future +tar: ./etc/pam.d/common-session-noninteractive: time stamp 2026-11-29 07:46:40 is 33988010.009167841 s in the future +tar: ./etc/pam.d/common-auth: time stamp 2026-11-29 07:46:40 is 33988010.009100768 s in the future +tar: ./etc/pam.d: time stamp 2026-12-02 20:29:29 is 34292979.008912308 s in the future +tar: ./etc/subgid: time stamp 2026-11-29 07:46:28 is 33987998.008845374 s in the future +tar: ./etc/passwd-: time stamp 2026-11-29 07:46:28 is 33987998.008780572 s in the future +tar: ./etc/environment: time stamp 2026-11-29 07:46:40 is 33988010.0086861 s in the future +tar: ./etc/perl/Net: time stamp 2026-11-29 07:50:24 is 33988234.008524356 s in the future +tar: ./etc/perl: time stamp 2026-11-29 07:50:02 is 33988212.008497913 s in the future +tar: ./etc/selinux: time stamp 2026-11-29 07:51:27 is 33988297.008356338 s in the future +tar: ./etc/kernel: time stamp 2026-11-29 07:46:41 is 33988011.008264691 s in the future +tar: ./etc/passwd: time stamp 2026-11-29 07:51:36 is 33988306.008221307 s in the future +tar: ./etc/dpkg/origins/default: time stamp 2026-11-29 07:46:28 is 33987998.008096253 s in the future +tar: ./etc/dpkg/origins: time stamp 2026-11-29 07:46:39 is 33988009.008044847 s in the future +tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time stamp 2026-11-29 07:52:40 is 33988370.007845877 s in the future +tar: ./etc/dpkg/dpkg.cfg.d: time stamp 2026-11-29 07:52:40 is 33988370.007803188 s in the future +tar: ./etc/dpkg: time stamp 2026-11-29 07:50:27 is 33988237.00777831 s in the future +tar: ./media: time stamp 2026-11-29 07:46:28 is 33987998.007577143 s in the future +tar: ./mnt: time stamp 2026-11-29 07:46:28 is 33987998.00750001 s in the future +tar: ./opt: time stamp 2026-11-29 07:46:28 is 33987998.006532259 s in the future +tar: ./root: time stamp 2026-11-29 07:46:28 is 33987998.006374668 s in the future +tar: ./run/lock: time stamp 2026-11-29 07:46:28 is 33987998.006279062 s in the future +tar: ./srv: time stamp 2026-11-29 07:46:28 is 33987998.006215261 s in the future +tar: ./usr/share/base-passwd: time stamp 2026-11-29 07:46:31 is 33988001.00593321 s in the future +tar: ./usr/share/terminfo/a: time stamp 2026-11-29 07:46:37 is 33988007.005817871 s in the future +tar: ./usr/share/terminfo/p: time stamp 2026-11-29 07:46:37 is 33988007.005737407 s in the future +tar: ./usr/share/terminfo/E: time stamp 2026-11-29 07:46:37 is 33988007.005618928 s in the future +tar: ./usr/share/terminfo/s: time stamp 2026-11-29 07:46:37 is 33988007.005265835 s in the future +tar: ./usr/share/terminfo/h: time stamp 2026-11-29 07:46:37 is 33988007.005156545 s in the future +tar: ./usr/share/terminfo/d: time stamp 2026-11-29 07:46:37 is 33988007.00505147 s in the future +tar: ./usr/share/terminfo/l: time stamp 2026-11-29 07:46:37 is 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2026-11-29 07:46:26 is 33987985.82747542 s in the future +tar: ./usr/share/locale/pl/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827450588 s in the future +tar: ./usr/share/locale/pl: time stamp 2026-11-29 07:46:26 is 33987985.827429592 s in the future +tar: ./usr/share/locale/ta/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827405047 s in the future +tar: ./usr/share/locale/zh_TW/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827366903 s in the future +tar: ./usr/share/locale/zh_TW: time stamp 2026-11-29 07:46:26 is 33987985.827345135 s in the future +tar: ./usr/share/locale/kk/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827321037 s in the future +tar: ./usr/share/locale/ia/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827281282 s in the future +tar: ./usr/share/locale/de/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827240776 s in the future +tar: ./usr/share/locale/de: time stamp 2026-11-29 07:46:26 is 33987985.827217893 s in the future +tar: ./usr/share/locale/ko/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827193757 s in the future +tar: ./usr/share/locale/ko: time stamp 2026-11-29 07:46:26 is 33987985.827170541 s in the future +tar: ./usr/share/locale/ro/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827145308 s in the future +tar: ./usr/share/locale/ro: time stamp 2026-11-29 07:46:26 is 33987985.827119839 s in the future +tar: ./usr/share/locale/lt/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827094105 s in the future +tar: ./usr/share/locale/lt: time stamp 2026-11-29 07:46:26 is 33987985.827071662 s in the future +tar: ./usr/share/locale/es/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.827046662 s in the future +tar: ./usr/share/locale/es: time stamp 2026-11-29 07:46:26 is 33987985.827024648 s in the future +tar: ./usr/share/locale/be/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826999252 s in the future +tar: ./usr/share/locale/sv/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826960148 s in the future +tar: ./usr/share/locale/sv: time stamp 2026-11-29 07:46:26 is 33987985.826937305 s in the future +tar: ./usr/share/locale/hu/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826913134 s in the future +tar: ./usr/share/locale/hu: time stamp 2026-11-29 07:46:26 is 33987985.826890567 s in the future +tar: ./usr/share/locale/tr/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.82686614 s in the future +tar: ./usr/share/locale/tr: time stamp 2026-11-29 07:46:26 is 33987985.826843157 s in the future +tar: ./usr/share/locale/nb/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826818808 s in the future +tar: ./usr/share/locale/nb: time stamp 2026-11-29 07:46:26 is 33987985.826795199 s in the future +tar: ./usr/share/locale/et/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826771268 s in the future +tar: ./usr/share/locale/et: time stamp 2026-11-29 07:46:26 is 33987985.826745943 s in the future +tar: ./usr/share/locale/zh_CN/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.82671995 s in the future +tar: ./usr/share/locale/zh_CN: time stamp 2026-11-29 07:46:26 is 33987985.82669658 s in the future +tar: ./usr/share/locale/nl/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826671203 s in the future +tar: ./usr/share/locale/nl: time stamp 2026-11-29 07:46:26 is 33987985.826649274 s in the future +tar: ./usr/share/locale/sr/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.82662491 s in the future +tar: ./usr/share/locale/sr: time stamp 2026-11-29 07:46:26 is 33987985.826602684 s in the future +tar: ./usr/share/locale/pt/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826577114 s in the future +tar: ./usr/share/locale/pt: time stamp 2026-11-29 07:46:26 is 33987985.82655352 s in the future +tar: ./usr/share/locale/uk/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826526227 s in the future +tar: ./usr/share/locale/uk: time stamp 2026-11-29 07:46:26 is 33987985.826502468 s in the future +tar: ./usr/share/locale/id/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826477153 s in the future +tar: ./usr/share/locale/id: time stamp 2026-11-29 07:46:26 is 33987985.82645274 s in the future +tar: ./usr/share/locale/fi/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826426421 s in the future +tar: ./usr/share/locale/fi: time stamp 2026-11-29 07:46:26 is 33987985.826403354 s in the future +tar: ./usr/share/locale/fr/LC_TIME: time stamp 2026-11-29 07:46:31 is 33987990.826376812 s in the future +tar: ./usr/share/locale/fr: time stamp 2026-11-29 07:46:26 is 33987985.82635306 s in the future +tar: ./usr/share/locale: time stamp 2026-11-29 07:51:38 is 33988297.826329883 s in the future +tar: ./usr/share/man/sl/man1: time stamp 2026-11-29 07:46:39 is 33987998.826302887 s in the future +tar: ./usr/share/man/cs/man8: time stamp 2026-11-29 07:52:01 is 33988320.826257676 s in the future +tar: ./usr/share/man/cs: time stamp 2026-11-29 07:51:34 is 33988293.826234513 s in the future +tar: ./usr/share/man/it/man1: time stamp 2026-11-29 07:51:39 is 33988298.826209535 s in the future +tar: ./usr/share/man/it/man8: time stamp 2026-11-30 23:31:29 is 34131088.826185437 s in the future +tar: ./usr/share/man/it: time stamp 2026-11-29 07:46:27 is 33987986.826162836 s in the future +tar: ./usr/share/man/ja/man1: time stamp 2026-11-29 07:51:34 is 33988293.826138138 s in the future +tar: ./usr/share/man/ja/man8: time stamp 2026-11-30 23:31:29 is 34131088.826113457 s in the future +tar: ./usr/share/man/ja: time stamp 2026-11-29 07:46:27 is 33987986.826090967 s in the future +tar: ./usr/share/man/gl/man8: time stamp 2026-11-29 07:52:01 is 33988320.826067648 s in the future +tar: ./usr/share/man/gl: time stamp 2026-11-29 07:51:39 is 33988298.826045452 s in the future +tar: ./usr/share/man/pl/man1: time stamp 2026-11-29 07:51:34 is 33988293.826020584 s in the future +tar: ./usr/share/man/pl/man8: time stamp 2026-11-30 23:31:29 is 34131088.825995775 s in the future +tar: ./usr/share/man/pl: time stamp 2026-11-29 07:46:27 is 33987986.825972535 s in the future +tar: ./usr/share/man/man1: time stamp 2026-12-02 23:31:24 is 34303883.825946194 s in the future +tar: ./usr/share/man/man8: time stamp 2026-12-02 20:29:29 is 34292968.825921339 s in the future +tar: ./usr/share/man/de/man1: time stamp 2026-11-30 23:31:29 is 34131088.825896425 s in the future +tar: ./usr/share/man/de/man8: time stamp 2026-11-30 23:31:29 is 34131088.825871747 s in the future +tar: ./usr/share/man/de: time stamp 2026-11-29 07:46:41 is 33988000.825845853 s in the future +tar: ./usr/share/man/es/man1: time stamp 2026-11-29 07:52:00 is 33988319.825819033 s in the future +tar: ./usr/share/man/es/man8: time stamp 2026-11-30 23:31:29 is 34131088.825795027 s in the future +tar: ./usr/share/man/es: time stamp 2026-11-29 07:46:27 is 33987986.825771762 s in the future +tar: ./usr/share/man/sv/man1: time stamp 2026-11-29 07:52:00 is 33988319.825747357 s in the future +tar: ./usr/share/man/sv: time stamp 2026-11-29 07:46:47 is 33988006.825722007 s in the future +tar: ./usr/share/man/man7: time stamp 2026-11-30 23:31:29 is 34131088.82569727 s in the future +tar: ./usr/share/man/fi/man8: time stamp 2026-11-29 07:52:01 is 33988320.825672602 s in the future +tar: ./usr/share/man/fi: time stamp 2026-11-29 07:51:39 is 33988298.825648425 s in the future +tar: ./usr/share/man/fr/man1: time stamp 2026-11-30 23:31:29 is 34131088.82562305 s in the future +tar: ./usr/share/man/fr/man8: time stamp 2026-11-30 23:31:29 is 34131088.82559807 s in the future +tar: ./usr/share/man/fr: time stamp 2026-11-29 07:46:41 is 33988000.825575316 s in the future +tar: ./usr/share/man: time stamp 2026-11-29 07:51:39 is 33988298.825552899 s in the future +tar: ./usr/share: time stamp 2026-11-29 07:51:42 is 33988301.825529401 s in the future +tar: ./usr: time stamp 2026-11-29 07:46:28 is 33987987.825507593 s in the future +tar: ./etc/systemd/system/timers.target.wants: time stamp 2026-11-29 07:50:27 is 33988226.825465647 s in the future +tar: ./etc/systemd/system: time stamp 2026-11-29 07:46:29 is 33987988.825442521 s in the future +tar: ./etc/alternatives: time stamp 2026-11-29 07:52:01 is 33988320.825403044 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem @@ -30,53 +2572,85 @@ dpkg-source: info: applying put_defs_sh_out_of_path.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2102242/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 31 08:40 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='35adbac08202471aa61222dfab945f14' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2102242' - PS1='# ' - PS2='> ' + INVOCATION_ID=941046cb9e854f0da672c895624bdd71 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=894406 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_k9Pk --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1 --logfile b1/build.log drop-seq_3.0.2+dfsg-2.dsc' - SUDO_GID='110' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/pbuilderrc_Nm7r --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2 --logfile b2/build.log drop-seq_3.0.2+dfsg-2.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2102242/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -386,7 +2960,7 @@ Get: 246 http://deb.debian.org/debian forky/main amd64 libpicard-java all 3.3.0+dfsg-2 [1778 kB] Get: 247 http://deb.debian.org/debian forky/main amd64 libyaml-snake-java all 2.0+ds+really1.33-1 [324 kB] Get: 248 http://deb.debian.org/debian forky/main amd64 testng all 6.9.12-4 [795 kB] -Fetched 246 MB in 11s (21.5 MB/s) +Fetched 246 MB in 13s (19.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libpipeline1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19869 files and directories currently installed.) @@ -1198,8 +3772,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri Oct 31 08:38:38 UTC 2025. -Universal Time is now: Fri Oct 31 08:38:38 UTC 2025. +Local time is now: Fri Oct 31 08:43:35 UTC 2025. +Universal Time is now: Fri Oct 31 08:43:35 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... @@ -1599,7 +4173,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/drop-seq-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../drop-seq_3.0.2+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/drop-seq-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../drop-seq_3.0.2+dfsg-2_source.changes dpkg-buildpackage: info: source package drop-seq dpkg-buildpackage: info: source version 3.0.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -1609,7 +4187,7 @@ debian/rules clean dh clean --with javahelper jh_clean -Duplicate specification "u=s" for option "u" +Duplicate specification "unlink|u" for option "u" debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/drop-seq-3.0.2+dfsg' dh_clean @@ -1693,7 +4271,7 @@ all: BUILD SUCCESSFUL -Total time: 8 seconds +Total time: 7 seconds dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep @@ -1726,8 +4304,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'drop-seq-tools' in '../drop-seq-tools_3.0.2+dfsg-2_all.deb'. dpkg-deb: building package 'drop-seq-testdata' in '../drop-seq-testdata_3.0.2+dfsg-2_all.deb'. +dpkg-deb: building package 'drop-seq-tools' in '../drop-seq-tools_3.0.2+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../drop-seq_3.0.2+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1735,12 +4313,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/894406/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2102242 and its subdirectories -I: Current time: Thu Oct 30 20:39:41 -12 2025 -I: pbuilder-time-stamp: 1761899981 +I: removing directory /srv/workspace/pbuilder/894406 and its subdirectories +I: Current time: Fri Oct 31 22:44:56 +14 2025 +I: pbuilder-time-stamp: 1761900296 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/drop-seq_3.0.2+dfsg-2.diff: 87.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/drop-seq_3.0.2+dfsg-2.diff.gz b2/build.log: 86.4% -- replaced with stdout Compressing the 1st log... b1/build.log: 81.7% -- replaced with stdout Fri Oct 31 08:44:59 UTC 2025 I: diffoscope 306 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_drop-seq_forky_amd64_1761900299 + touch /var/log/reproducible-builds/diffoscope_stamp_drop-seq_forky_amd64_1761900299 + RESULT=0 + systemd-run '--description=diffoscope on drop-seq/3.0.2+dfsg-2 in forky/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_3-73411 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC --run-session -c jenkins-reproducible-forky-diffoscope-837c7172-c08f-43db-8f4a-13e4974c92a3 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/dbd-tmp-FtqkDFU ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/drop-seq_3.0.2+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/drop-seq_3.0.2+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/drop-seq_3.0.2+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1/drop-seq_3.0.2+dfsg-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2/drop-seq_3.0.2+dfsg-2_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_3-73411.service; invocation ID: 693e42d8e969451d8d023b81c9e98b56 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/drop-seq_3.0.2+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/drop-seq_3.0.2+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/drop-seq_3.0.2+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b1/drop-seq_3.0.2+dfsg-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.nGsSvKCC/b2/drop-seq_3.0.2+dfsg-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 204ms CPU time consumed: 169ms Memory peak: 17.7M (swap: 0B) _ __| |_ __ ___ _ __ ___ ___ __ _ / _` | '__/ _ \| '_ \ _____/ __|/ _ \/ _` | | (_| | | | (_) | |_) |_____\__ \ __/ (_| | \__,_|_| \___/| .__/ |___/\___|\__, | |_| |_| Fri Oct 31 08:45:00 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Fri Oct 31 08:45:00 UTC 2025 I: drop-seq from forky built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-10-31 08:45:01] INFO: Starting at 2025-10-31 08:45:00.999983 [2025-10-31 08:45:01] INFO: Generating the pages of 1 package(s) [2025-10-31 08:45:01] CRITICAL: https://tests.reproducible-builds.org/debian/forky/amd64/drop-seq didn't produce a buildlog, even though it has been built. [2025-10-31 08:45:01] INFO: Finished at 2025-10-31 08:45:01.283122, took: 0:00:00.283143 Fri Oct 31 08:45:01 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/forky/amd64/drop-seq.html Fri Oct 31 08:45:01 UTC 2025 I: Removing signed drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc files: removed './b1/drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc' removed './b2/drop-seq_3.0.2+dfsg-2_amd64.buildinfo.asc' 1761900301 amd64 forky drop-seq Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/drop-seq_3.0.2+dfsg-2.rbuild.log: 80.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/amd64/drop-seq_3.0.2+dfsg-2.rbuild.log.gz [2025-10-31 08:45:01] INFO: Starting at 2025-10-31 08:45:01.615079 [2025-10-31 08:45:01] INFO: Generating the pages of 1 package(s) [2025-10-31 08:45:01] INFO: Finished at 2025-10-31 08:45:01.885614, took: 0:00:00.270538 All cleanup done. Fri Oct 31 08:45:02 UTC 2025 - total duration: 0h 8m 43s. Fri Oct 31 08:45:02 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-CCPpfEkd, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 8min 44.691s CPU time consumed: 5.138s Memory peak: 324.6M (swap: 0B)