Running as unit: rb-build-amd64_35-35659.service ==================================================================================== Mon Nov 25 02:11:15 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_35) on jenkins, called using "infom01-amd64 infom02-amd64" as arguments. Mon Nov 25 02:11:15 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-SgVxqzLT" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Nov 25 02:11:15 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom01-amd64.debian.net is marked as down. Mon Nov 25 02:11:15 UTC 2024 - checking via ssh if infom01-amd64.debian.net is up. removed '/tmp/read-only-fs-test-5YKZu2' Mon Nov 25 02:11:16 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom02-amd64.debian.net is marked as down. Mon Nov 25 02:11:16 UTC 2024 - checking via ssh if infom02-amd64.debian.net is up. removed '/tmp/read-only-fs-test-Prxdpf' ok, let's check if python-loompy is building anywhere yet… ok, python-loompy is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of python-loompy in unstable on amd64 on jenkins now. 1st build will be done on infom01-amd64.debian.net. 2nd build will be done on infom02-amd64.debian.net. ============================================================================= Mon Nov 25 02:11:25 UTC 2024 I: starting to build python-loompy/unstable/amd64 on jenkins on '2024-11-25 02:11' Mon Nov 25 02:11:25 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_35/35659/console.log 1732500685 amd64 unstable python-loompy Mon Nov 25 02:11:25 UTC 2024 I: Downloading source for unstable/python-loompy=3.0.7+dfsg-3 --2024-11-25 02:11:25-- http://deb.debian.org/debian/pool/main/p/python-loompy/python-loompy_3.0.7%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2506 (2.4K) [text/prs.lines.tag] Saving to: ‘python-loompy_3.0.7+dfsg-3.dsc’ 0K .. 100% 371M=0s 2024-11-25 02:11:25 (371 MB/s) - ‘python-loompy_3.0.7+dfsg-3.dsc’ saved [2506/2506] --2024-11-25 02:11:25-- http://deb.debian.org/debian/pool/main/p/python-loompy/python-loompy_3.0.7%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2506 (2.4K) [text/prs.lines.tag] Saving to: ‘python-loompy_3.0.7+dfsg-3.dsc’ 0K .. 100% 371M=0s 2024-11-25 02:11:25 (371 MB/s) - ‘python-loompy_3.0.7+dfsg-3.dsc’ saved [2506/2506] Mon Nov 25 02:11:25 UTC 2024 I: python-loompy_3.0.7+dfsg-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: python-loompy Binary: python3-loompy Architecture: any-amd64 arm64 loong64 mips64el ppc64el s390x ia64 ppc64 riscv64 sparc64 alpha Version: 3.0.7+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/linnarsson-lab/loompy Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/python-loompy Vcs-Git: https://salsa.debian.org/med-team/python-loompy.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: python3-all, python3-pytest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-h5py , python3-numba , python3-click , python3-scipy , python3-numpy-groupies , python3-pytest Package-List: python3-loompy deb python optional arch=any-amd64,arm64,loong64,mips64el,ppc64el,s390x,ia64,ppc64,riscv64,sparc64,alpha Checksums-Sha1: ea94d842470f3b6bfbb982d9e208c12306c6316e 2266020 python-loompy_3.0.7+dfsg.orig.tar.xz 92969c4fe1a12bb0b1ce110d56bef1a41f5f56b4 5344 python-loompy_3.0.7+dfsg-3.debian.tar.xz Checksums-Sha256: 6d9a8d4b2aa7d7ae4bada4a644dfccd43ba592f22fd5c0fe62c80f40dfbbeb3b 2266020 python-loompy_3.0.7+dfsg.orig.tar.xz 529c75b7e525c608dcd57297696c9125093299d3de8eaf4d684bf7cbf4320810 5344 python-loompy_3.0.7+dfsg-3.debian.tar.xz Files: 4628e25f65e3dc14b8b838eac8014044 2266020 python-loompy_3.0.7+dfsg.orig.tar.xz af0d1aec7dd4574d3057e1e2e737b670 5344 python-loompy_3.0.7+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWZrbMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH26g//VA409pSE5IYBOjz45e8j//bB1q8sPZVA m7SMEyjQpeTD+8L5n7bVSHoIl5zotDWauIstNkF8sJWUVRc7Z0+UchcihYHnbJ0K T21TZxjNSuJrPpiP2EVNeOEPaJUuJZvFghVioZNAiZ4zFN2fBg4eQNfoZxFtdp/e h/I3DobmiWr9TD+vcKm5TTFGhKNwccRU/une7DQmtr+kKX3J6KHU8PYo9CKEkXKH ySJkDHnTYfYUrb0vm/Nlc1AIWPQ9oxQBfar2WnTqX9iLoV5dSc8muewgqZVFigLU lkXSeM+QmHwiF4XODzC9JxcxGYD59ShjX+5MhLi3BeNYXdlQDNcx6Lgts61Gd+eW B1SwQm+Rw7AFfnMtViETQZCWasLKP8Q9NO+OIfguUe1yWWHbw5O5KGyv3awmj+MW MGWKW3NVT1vP7/b/jWfWR1TA8Nx/NS5l+XAj2C7cFuMrFVO0X8fKE2YGV87OA5H7 XBdTMZj6h5227hJYvPFmq5amPh68tK1dmYmo0dmgMSNH7nuDtQ8nzojfios+dobM 7C1aZku5krog76BpXIjmBor3WAIGLPLjWZtlHD+/wsYixGCgmkIBG6z85TMnlsFn /BkBR2Umj2DV2O5FpA1i/k21LEK3rYDrIcLF/sg0t6M0nIFSWTgNhSoTYurwRmIc hxXFVIRqRaQ= =qeVZ -----END PGP SIGNATURE----- Mon Nov 25 02:11:25 UTC 2024 I: Checking whether the package is not for us Mon Nov 25 02:11:25 UTC 2024 I: Starting 1st build on remote node infom01-amd64.debian.net. Mon Nov 25 02:11:25 UTC 2024 I: Preparing to do remote build '1' on infom01-amd64.debian.net. Mon Nov 25 02:11:25 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom01-amd64.debian.net is marked as down. Mon Nov 25 02:11:25 UTC 2024 - checking via ssh if infom01-amd64.debian.net is up. removed '/tmp/read-only-fs-test-ueRNUp' ==================================================================================== Mon Nov 25 02:11:27 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on infom01-amd64, called using "1 python-loompy unstable /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz 3.0.7+dfsg-3" as arguments. Mon Nov 25 02:11:27 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-WCbRuF2x" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Nov 25 02:11:27 UTC 2024 I: Downloading source for unstable/python-loompy=3.0.7+dfsg-3 Reading package lists... NOTICE: 'python-loompy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-loompy.git Please use: git clone https://salsa.debian.org/med-team/python-loompy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2274 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-loompy 3.0.7+dfsg-3 (dsc) [2506 B] Get:2 http://deb.debian.org/debian unstable/main python-loompy 3.0.7+dfsg-3 (tar) [2266 kB] Get:3 http://deb.debian.org/debian unstable/main python-loompy 3.0.7+dfsg-3 (diff) [5344 B] Fetched 2274 kB in 0s (17.3 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'python-loompy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-loompy.git Please use: git clone https://salsa.debian.org/med-team/python-loompy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2274 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-loompy 3.0.7+dfsg-3 (dsc) [2506 B] Get:2 http://deb.debian.org/debian unstable/main python-loompy 3.0.7+dfsg-3 (tar) [2266 kB] Get:3 http://deb.debian.org/debian unstable/main python-loompy 3.0.7+dfsg-3 (diff) [5344 B] Fetched 2274 kB in 0s (17.3 MB/s) Download complete and in download only mode ============================================================================= Building python-loompy in unstable on amd64 on infom01-amd64 now. Date: Mon Nov 25 02:11:27 UTC 2024 Date UTC: Mon Nov 25 02:11:27 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 24 14:11:27 -12 2024 I: pbuilder-time-stamp: 1732500687 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-loompy_3.0.7+dfsg-3.dsc] I: copying [./python-loompy_3.0.7+dfsg.orig.tar.xz] I: copying [./python-loompy_3.0.7+dfsg-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Jan 6 19:44:51 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-loompy_3.0.7+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting python-loompy in python-loompy-3.0.7+dfsg dpkg-source: info: unpacking python-loompy_3.0.7+dfsg.orig.tar.xz dpkg-source: info: unpacking python-loompy_3.0.7+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying tests-open-loom-write-permissions.patch dpkg-source: info: applying numpy_1.24.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1029812/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e73c7f6d8b1843979ff8251035a2b1f7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1029812' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz/pbuilderrc_CuLf --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz/b1 --logfile b1/build.log python-loompy_3.0.7+dfsg-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom01-amd64 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1029812/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-h5py, python3-numba, python3-click, python3-scipy, python3-numpy-groupies, python3-pytest dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numba; however: Package python3-numba is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy-groupies; however: Package python3-numpy-groupies is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhwloc15{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} libllvm14t64{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libpfm4{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} libz3-4{a} llvm-14{a} llvm-14-linker-tools{a} llvm-14-runtime{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-click{a} python3-colorama{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-llvmlite{a} python3-minimal{a} python3-more-itertools{a} python3-numba{a} python3-numpy{a} python3-numpy-groupies{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-scipy{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: binfmt-support ca-certificates curl krb5-locales libarchive-cpio-perl libhwloc-plugins libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules llvm-14-dev lynx numba-doc publicsuffix python3-pil python3-pip python3-pooch python3-pygments systemd wget 0 packages upgraded, 111 newly installed, 0 to remove and 0 not upgraded. Need to get 114 MB of archives. After unpacking 531 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.0-2 [856 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.0-2 [2038 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 46 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 80 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libllvm14t64 amd64 1:14.0.6-20 [21.9 MB] Get: 87 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libpfm4 amd64 4.13.0+git83-g91970fe-1 [368 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [1992 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libtbbmalloc2 amd64 2021.12.0-1 [48.9 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libtbbbind-2-5 amd64 2021.12.0-1 [14.4 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libtbb12 amd64 2021.12.0-1 [87.8 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 llvm-14-runtime amd64 1:14.0.6-20 [481 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 llvm-14-linker-tools amd64 1:14.0.6-20 [1292 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 llvm-14 amd64 1:14.0.6-20 [11.8 MB] Get: 96 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.0-2 [730 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.7-1 [1052 B] Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-click all 8.1.7-2 [94.3 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-8+b1 [1460 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-8 [14.9 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-llvmlite amd64 0.42.0-1+b1 [180 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-2 [20.5 MB] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-numba amd64 0.59.1+dfsg-3 [1732 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-numpy-groupies all 0.10.2-1 [31.4 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Fetched 114 MB in 5s (22.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20286 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_amd64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../01-libpython3.13-minimal_3.13.0-2_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.0-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../02-python3.13-minimal_3.13.0-2_amd64.deb ... Unpacking python3.13-minimal (3.13.0-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../03-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../05-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../08-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../10-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../11-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../12-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../18-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../19-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../20-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../21-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../23-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../24-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../26-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../27-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../28-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../29-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... 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Setting up po-debconf (1.0.21+nmu1) ... Setting up libtbb12:amd64 (2021.12.0-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up llvm-14-runtime (1:14.0.6-20) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Setting up llvm-14 (1:14.0.6-20) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3 (3.12.7-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-llvmlite (0.42.0-1+b1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.2-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.7-1) ... Setting up python3-click (8.1.7-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.14.1-2) ... Setting up python3-numpy-groupies (0.10.2-1) ... Setting up python3-h5py-serial (3.11.0-8+b1) ... Setting up python3-numba (0.59.1+dfsg-3) ... update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode Setting up python3-h5py (3.11.0-8) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-loompy-3.0.7+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-loompy_3.0.7+dfsg-3_source.changes dpkg-buildpackage: info: source package python-loompy dpkg-buildpackage: info: source version 3.0.7+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from python-loompy-3.0.7+dfsg/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.13 3.12" I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-loompy.substvars debian/files rm -fr -- debian/python3-loompy/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.13 3.12" I: pybuild base:311: python3.13 setup.py config running config I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.13 3.12" I: pybuild base:311: /usr/bin/python3.13 setup.py build running build running build_py creating /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loompy.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_validator.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/graph_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/cell_calling.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/view_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/bus_file.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/_version.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/commands.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_view.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/utils.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/normalize.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/metadata_loaders.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/__init__.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/to_html.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/layer_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/global_attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_layer.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loompy.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loom_validator.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/graph_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/cell_calling.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/view_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/bus_file.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/_version.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/commands.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loom_view.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/utils.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/normalize.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/metadata_loaders.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/__init__.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/to_html.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/layer_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/global_attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loom_layer.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.13 3.12" I: pybuild base:311: cd /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/python-loompy-3.0.7+dfsg plugins: typeguard-4.4.1 collected 0 items / 5 errors ==================================== ERRORS ==================================== _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_attribute_manager.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_attribute_manager.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_attribute_manager.py:3: in from loompy import AttributeManager loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_connection.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_connection.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_connection.py:6: in import loompy loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_file_attribute_manager.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_file_attribute_manager.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_file_attribute_manager.py:8: in from loompy import GlobalAttributeManager loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported ___ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_main.py ____ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_main.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_main.py:1: in import loompy loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_validator.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_validator.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_validator.py:6: in import loompy loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported =============================== warnings summary =============================== loompy/view_manager.py:23 /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy/view_manager.py:23: SyntaxWarning: "is not" with 'int' literal. Did you mean "!="? if type(slice_) is not tuple or len(slice_) is not 2: -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ ERROR tests/test_attribute_manager.py ERROR tests/test_connection.py ERROR tests/test_file_attribute_manager.py ERROR tests/test_main.py ERROR tests/test_validator.py !!!!!!!!!!!!!!!!!!! Interrupted: 5 errors during collection !!!!!!!!!!!!!!!!!!!! ========================= 1 warning, 5 errors in 0.80s ========================= E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build; python3.13 -m pytest tests I: pybuild base:311: cd /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build; python3.12 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/python-loompy-3.0.7+dfsg plugins: typeguard-4.4.1 collected 7 items tests/test_attribute_manager.py .. [ 28%] tests/test_connection.py . [ 42%] tests/test_file_attribute_manager.py . [ 57%] tests/test_main.py .. [ 85%] tests/test_validator.py . [100%] =============================== warnings summary =============================== loompy/view_manager.py:23 /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy/view_manager.py:23: SyntaxWarning: "is not" with 'int' literal. Did you mean "!="? if type(slice_) is not tuple or len(slice_) is not 2: .pybuild/cpython3_3.12_loompy/build/tests/test_connection.py: 7 warnings .pybuild/cpython3_3.12_loompy/build/tests/test_main.py: 22 warnings .pybuild/cpython3_3.12_loompy/build/tests/test_validator.py: 1 warning /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy/utils.py:15: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). return datetime.datetime.utcnow().strftime("%Y%m%dT%H%M%S.%fZ") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================== 7 passed, 31 warnings in 1.40s ======================== rm -fr -- /tmp/dh-xdg-rundir-feoh7JNh dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 make: *** [debian/rules:7: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1029812 and its subdirectories Starting cleanup. All cleanup done. Mon Nov 25 02:14:07 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-WCbRuF2x, removing. /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 25 02:14 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 25 02:11 b2 -rw-r--r-- 1 jenkins jenkins 2506 Jan 6 2024 python-loompy_3.0.7+dfsg-3.dsc -rw------- 1 jenkins jenkins 3677 Nov 25 02:11 rbuildlog.H11ptIY /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz/b1: total 72 -rw-r--r-- 1 jenkins jenkins 70916 Nov 25 02:14 build.log /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz/b2: total 0 Mon Nov 25 02:14:08 UTC 2024 I: Deleting $TMPDIR on infom01-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 24 14:11:27 -12 2024 I: pbuilder-time-stamp: 1732500687 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-loompy_3.0.7+dfsg-3.dsc] I: copying [./python-loompy_3.0.7+dfsg.orig.tar.xz] I: copying [./python-loompy_3.0.7+dfsg-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Jan 6 19:44:51 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-loompy_3.0.7+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting python-loompy in python-loompy-3.0.7+dfsg dpkg-source: info: unpacking python-loompy_3.0.7+dfsg.orig.tar.xz dpkg-source: info: unpacking python-loompy_3.0.7+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying tests-open-loom-write-permissions.patch dpkg-source: info: applying numpy_1.24.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1029812/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e73c7f6d8b1843979ff8251035a2b1f7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1029812' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz/pbuilderrc_CuLf --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.RAinaFFz/b1 --logfile b1/build.log python-loompy_3.0.7+dfsg-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom01-amd64 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1029812/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-h5py, python3-numba, python3-click, python3-scipy, python3-numpy-groupies, python3-pytest dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numba; however: Package python3-numba is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy-groupies; however: Package python3-numpy-groupies is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhwloc15{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} libllvm14t64{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libpfm4{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} libz3-4{a} llvm-14{a} llvm-14-linker-tools{a} llvm-14-runtime{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-click{a} python3-colorama{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-llvmlite{a} python3-minimal{a} python3-more-itertools{a} python3-numba{a} python3-numpy{a} python3-numpy-groupies{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-scipy{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: binfmt-support ca-certificates curl krb5-locales libarchive-cpio-perl libhwloc-plugins libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules llvm-14-dev lynx numba-doc publicsuffix python3-pil python3-pip python3-pooch python3-pygments systemd wget 0 packages upgraded, 111 newly installed, 0 to remove and 0 not upgraded. Need to get 114 MB of archives. After unpacking 531 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.0-2 [856 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.0-2 [2038 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 46 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 80 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libllvm14t64 amd64 1:14.0.6-20 [21.9 MB] Get: 87 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libpfm4 amd64 4.13.0+git83-g91970fe-1 [368 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.0-2 [1992 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libtbbmalloc2 amd64 2021.12.0-1 [48.9 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libtbbbind-2-5 amd64 2021.12.0-1 [14.4 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libtbb12 amd64 2021.12.0-1 [87.8 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 llvm-14-runtime amd64 1:14.0.6-20 [481 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 llvm-14-linker-tools amd64 1:14.0.6-20 [1292 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 llvm-14 amd64 1:14.0.6-20 [11.8 MB] Get: 96 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.0-2 [730 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.7-1 [1052 B] Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-click all 8.1.7-2 [94.3 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-8+b1 [1460 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-8 [14.9 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-llvmlite amd64 0.42.0-1+b1 [180 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-2 [20.5 MB] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-numba amd64 0.59.1+dfsg-3 [1732 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-numpy-groupies all 0.10.2-1 [31.4 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Fetched 114 MB in 5s (22.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_amd64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:amd64 (3.12.7-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20286 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... 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Setting up libaec0:amd64 (1.1.3-1+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Nov 25 02:13:26 UTC 2024. Universal Time is now: Mon Nov 25 02:13:26 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libpython3.13-minimal:amd64 (3.13.0-2) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.13.3-1) ... Setting up libblas3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpfm4:amd64 (4.13.0+git83-g91970fe-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up liblzf1:amd64 (3.6-4+b2) ... Setting up libhwloc15:amd64 (2.11.2-1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:amd64 (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up python3.13-minimal (3.13.0-2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libtbbbind-2-5:amd64 (2021.12.0-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libllvm14t64:amd64 (1:14.0.6-20) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up llvm-14-linker-tools (1:14.0.6-20) ... Setting up libpython3.13-stdlib:amd64 (3.13.0-2) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libcurl4t64:amd64 (8.11.0-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up python3.13 (3.13.0-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtbb12:amd64 (2021.12.0-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up llvm-14-runtime (1:14.0.6-20) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Setting up llvm-14 (1:14.0.6-20) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3 (3.12.7-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-llvmlite (0.42.0-1+b1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.2-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.7-1) ... Setting up python3-click (8.1.7-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.14.1-2) ... Setting up python3-numpy-groupies (0.10.2-1) ... Setting up python3-h5py-serial (3.11.0-8+b1) ... Setting up python3-numba (0.59.1+dfsg-3) ... update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode Setting up python3-h5py (3.11.0-8) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-loompy-3.0.7+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-loompy_3.0.7+dfsg-3_source.changes dpkg-buildpackage: info: source package python-loompy dpkg-buildpackage: info: source version 3.0.7+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from python-loompy-3.0.7+dfsg/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.13 3.12" I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-loompy.substvars debian/files rm -fr -- debian/python3-loompy/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.13 3.12" I: pybuild base:311: python3.13 setup.py config running config I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.13 3.12" I: pybuild base:311: /usr/bin/python3.13 setup.py build running build running build_py creating /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loompy.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_validator.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/graph_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/cell_calling.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/view_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/bus_file.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/_version.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/commands.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_view.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/utils.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/normalize.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/metadata_loaders.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/__init__.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/to_html.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/layer_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/global_attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy copying loompy/loom_layer.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loompy.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loom_validator.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/graph_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/cell_calling.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/view_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/bus_file.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/_version.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/commands.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loom_view.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/utils.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/normalize.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/metadata_loaders.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/__init__.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/to_html.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/layer_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/global_attribute_manager.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy copying loompy/loom_layer.py -> /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.13 3.12" I: pybuild base:311: cd /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/python-loompy-3.0.7+dfsg plugins: typeguard-4.4.1 collected 0 items / 5 errors ==================================== ERRORS ==================================== _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_attribute_manager.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_attribute_manager.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_attribute_manager.py:3: in from loompy import AttributeManager loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_connection.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_connection.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_connection.py:6: in import loompy loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_file_attribute_manager.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_file_attribute_manager.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_file_attribute_manager.py:8: in from loompy import GlobalAttributeManager loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported ___ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_main.py ____ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_main.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_main.py:1: in import loompy loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported _ ERROR collecting .pybuild/cpython3_3.13_loompy/build/tests/test_validator.py _ ImportError while importing test module '/build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/tests/test_validator.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:4: in from numba.core.typeconv import _typeconv E ImportError: cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py) During handling of the above exception, another exception occurred: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) tests/test_validator.py:6: in import loompy loompy/__init__.py:14: in from .bus_file import create_from_fastq loompy/bus_file.py:14: in from numba import jit /usr/lib/python3/dist-packages/numba/__init__.py:74: in from numba.misc.special import ( /usr/lib/python3/dist-packages/numba/misc/special.py:3: in from numba.core.typing.typeof import typeof /usr/lib/python3/dist-packages/numba/core/typing/__init__.py:1: in from .context import BaseContext, Context /usr/lib/python3/dist-packages/numba/core/typing/context.py:11: in from numba.core.typeconv import Conversion, rules /usr/lib/python3/dist-packages/numba/core/typeconv/rules.py:2: in from .typeconv import TypeManager, TypeCastingRules /usr/lib/python3/dist-packages/numba/core/typeconv/typeconv.py:16: in raise ImportError(msg) E ImportError: Numba could not be imported. E -------------------------------------------------------------------------------- E If you are seeing this message and are undertaking Numba development work, you may need to rebuild Numba. E Please see the development set up guide: E E https://numba.readthedocs.io/en/stable/developer/contributing.html. E E -------------------------------------------------------------------------------- E If you are not working on Numba development, the original error was: 'cannot import name '_typeconv' from 'numba.core.typeconv' (/usr/lib/python3/dist-packages/numba/core/typeconv/__init__.py)'. E For help, please visit: E E https://numba.readthedocs.io/en/stable/user/faq.html#numba-could-not-be-imported =============================== warnings summary =============================== loompy/view_manager.py:23 /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build/loompy/view_manager.py:23: SyntaxWarning: "is not" with 'int' literal. Did you mean "!="? if type(slice_) is not tuple or len(slice_) is not 2: -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html =========================== short test summary info ============================ ERROR tests/test_attribute_manager.py ERROR tests/test_connection.py ERROR tests/test_file_attribute_manager.py ERROR tests/test_main.py ERROR tests/test_validator.py !!!!!!!!!!!!!!!!!!! Interrupted: 5 errors during collection !!!!!!!!!!!!!!!!!!!! ========================= 1 warning, 5 errors in 0.80s ========================= E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.13_loompy/build; python3.13 -m pytest tests I: pybuild base:311: cd /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build; python3.12 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/python-loompy-3.0.7+dfsg plugins: typeguard-4.4.1 collected 7 items tests/test_attribute_manager.py .. [ 28%] tests/test_connection.py . [ 42%] tests/test_file_attribute_manager.py . [ 57%] tests/test_main.py .. [ 85%] tests/test_validator.py . [100%] =============================== warnings summary =============================== loompy/view_manager.py:23 /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy/view_manager.py:23: SyntaxWarning: "is not" with 'int' literal. Did you mean "!="? if type(slice_) is not tuple or len(slice_) is not 2: .pybuild/cpython3_3.12_loompy/build/tests/test_connection.py: 7 warnings .pybuild/cpython3_3.12_loompy/build/tests/test_main.py: 22 warnings .pybuild/cpython3_3.12_loompy/build/tests/test_validator.py: 1 warning /build/reproducible-path/python-loompy-3.0.7+dfsg/.pybuild/cpython3_3.12_loompy/build/loompy/utils.py:15: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). return datetime.datetime.utcnow().strftime("%Y%m%dT%H%M%S.%fZ") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================== 7 passed, 31 warnings in 1.40s ======================== rm -fr -- /tmp/dh-xdg-rundir-feoh7JNh dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 make: *** [debian/rules:7: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1029812 and its subdirectories python-loompy failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-loompy_3.0.7+dfsg-3.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-loompy_3.0.7+dfsg-3.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/python-loompy_3.0.7+dfsg-3.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/python-loompy_3.0.7+dfsg-3.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/amd64/python-loompy_3.0.7+dfsg-3_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/python-loompy_3.0.7+dfsg-3.diff.gz' Mon Nov 25 02:14:09 UTC 2024 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 83.9% -- replaced with stdout Mon Nov 25 02:14:09 UTC 2024 I: https://tests.reproducible-builds.org/debian/unstable/amd64/python-loompy : reproducible ➤ FTBFS INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-25 02:14:10] INFO: Starting at 2024-11-25 02:14:10.315898 [2024-11-25 02:14:10] INFO: Generating the pages of 1 package(s) [2024-11-25 02:14:10] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/amd64/python-loompy didn't produce a buildlog, even though it has been built. [2024-11-25 02:14:10] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/python-loompy_3.0.7+dfsg-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/python-loompy_3.0.7+dfsg-3.diff.gz is missing [2024-11-25 02:14:10] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/python-loompy_3.0.7+dfsg-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/python-loompy_3.0.7+dfsg-3.diff.gz is missing [2024-11-25 02:14:10] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/python-loompy_3.0.7+dfsg-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/python-loompy_3.0.7+dfsg-2.diff.gz is missing [2024-11-25 02:14:10] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/python-loompy_3.0.7+dfsg-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/python-loompy_3.0.7+dfsg-2.diff.gz is missing [2024-11-25 02:14:10] INFO: Finished at 2024-11-25 02:14:10.564475, took: 0:00:00.248581 Mon Nov 25 02:14:10 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/python-loompy.html [2024-11-25 02:14:10] INFO: Starting at 2024-11-25 02:14:10.906298 [2024-11-25 02:14:10] INFO: Scheduling packages in amd64/unstable [2024-11-25 02:14:11] INFO: jenkins scheduled in unstable/amd64, reason: 'reproducible ➤ FTBFS': python-loompy [2024-11-25 02:14:11] INFO: Finished at 2024-11-25 02:14:11.507319, took: 0:00:00.601029 Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-loompy_3.0.7+dfsg-3.rbuild.log: 82.2% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/amd64/python-loompy_3.0.7+dfsg-3.rbuild.log.gz [2024-11-25 02:14:11] INFO: Starting at 2024-11-25 02:14:11.858148 [2024-11-25 02:14:11] INFO: Generating the pages of 1 package(s) [2024-11-25 02:14:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/python-loompy_3.0.7+dfsg-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/python-loompy_3.0.7+dfsg-3.diff.gz is missing [2024-11-25 02:14:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/python-loompy_3.0.7+dfsg-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/python-loompy_3.0.7+dfsg-3.diff.gz is missing [2024-11-25 02:14:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/python-loompy_3.0.7+dfsg-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/python-loompy_3.0.7+dfsg-3.diff.gz is missing [2024-11-25 02:14:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/python-loompy_3.0.7+dfsg-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/python-loompy_3.0.7+dfsg-2.diff.gz is missing [2024-11-25 02:14:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/python-loompy_3.0.7+dfsg-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/python-loompy_3.0.7+dfsg-2.diff.gz is missing [2024-11-25 02:14:12] INFO: Finished at 2024-11-25 02:14:12.099322, took: 0:00:00.241179 All cleanup done. Mon Nov 25 02:14:12 UTC 2024 - total duration: 0h 2m 54s. Mon Nov 25 02:14:12 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-SgVxqzLT, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 56.634s CPU time consumed: 5.416s