Running as unit: rb-build-amd64_38-35374.service ==================================================================================== Tue Nov 26 12:40:26 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_amd64_38) on jenkins, called using "infom02-amd64 infom01-amd64" as arguments. Tue Nov 26 12:40:26 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-MkDiSQV9" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Nov 26 12:40:26 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom02-amd64.debian.net is marked as down. Tue Nov 26 12:40:26 UTC 2024 - checking via ssh if infom02-amd64.debian.net is up. removed '/tmp/read-only-fs-test-6PVSmX' Tue Nov 26 12:40:26 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom01-amd64.debian.net is marked as down. Tue Nov 26 12:40:26 UTC 2024 - checking via ssh if infom01-amd64.debian.net is up. removed '/tmp/read-only-fs-test-YHZosN' ok, let's check if dazzdb is building anywhere yet… ok, dazzdb is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of dazzdb in trixie on amd64 on jenkins now. 1st build will be done on infom02-amd64.debian.net. 2nd build will be done on infom01-amd64.debian.net. ============================================================================= Tue Nov 26 12:40:43 UTC 2024 I: starting to build dazzdb/trixie/amd64 on jenkins on '2024-11-26 12:40' Tue Nov 26 12:40:43 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_38/35374/console.log 1732624843 amd64 trixie dazzdb Tue Nov 26 12:40:43 UTC 2024 I: Downloading source for trixie/dazzdb=1.0+git20240115.be65e59-1 --2024-11-26 12:40:43-- http://deb.debian.org/debian/pool/main/d/dazzdb/dazzdb_1.0%2bgit20240115.be65e59-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2295 (2.2K) [text/prs.lines.tag] Saving to: ‘dazzdb_1.0+git20240115.be65e59-1.dsc’ 0K .. 100% 267M=0s 2024-11-26 12:40:43 (267 MB/s) - ‘dazzdb_1.0+git20240115.be65e59-1.dsc’ saved [2295/2295] --2024-11-26 12:40:43-- http://deb.debian.org/debian/pool/main/d/dazzdb/dazzdb_1.0%2bgit20240115.be65e59-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2295 (2.2K) [text/prs.lines.tag] Saving to: ‘dazzdb_1.0+git20240115.be65e59-1.dsc’ 0K .. 100% 267M=0s 2024-11-26 12:40:43 (267 MB/s) - ‘dazzdb_1.0+git20240115.be65e59-1.dsc’ saved [2295/2295] Tue Nov 26 12:40:43 UTC 2024 I: dazzdb_1.0+git20240115.be65e59-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dazzdb Binary: dazzdb Architecture: any Version: 1.0+git20240115.be65e59-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Pranav Ballaney , Étienne Mollier Homepage: https://github.com/thegenemyers/DAZZ_DB Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/dazzdb Vcs-Git: https://salsa.debian.org/med-team/dazzdb.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: dazzdb deb science optional arch=any Checksums-Sha1: 2882e02f54f491edfc54314b54a671c115147ea0 98924 dazzdb_1.0+git20240115.be65e59.orig.tar.xz 25a398156d22129975abcdbafae53ce0af828825 7068 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz Checksums-Sha256: 41e3f85500c25f133375854b9c40d274b3d6ddf3a1638d57cf0862393168e16a 98924 dazzdb_1.0+git20240115.be65e59.orig.tar.xz 33b55eedd4ba96b69f0aa9eb76f0ce91b11d3ed3f178f80e773f29d83d379385 7068 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz Files: 358f0e5aba3074d1aecf6a3bab2da9a3 98924 dazzdb_1.0+git20240115.be65e59.orig.tar.xz 8a764a5bbac216af15baca205ce8b6d3 7068 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz Dgit: 0033c5ae42a8f0411329f78bc8f2c97f0802f6c6 debian archive/debian/1.0+git20240115.be65e59-1 https://git.dgit.debian.org/dazzdb -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmZWPyMUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrr3g//T4rzgtmBaTQOIxOkA2zaH837oUfQ 6lYs+8Vxk6ypdaewOFv7C/ALwOCkbHnlgiUTibBjvaJVpT4vDjz9foO64n2aIIIC D9hb9UMaQYQiDoYlbUuyGmVnV7C2IByyCtS/QGf2VQGlAFPRh/Jgeeh58Lour7/B lj7GCsYXXG3JXUziknqQI0lzuTD2oJg0hwFpYx5afttlRPaWU1xIGihRKVHJFV0P RVlU4DKvZzUSkTvTFYqUt8j5pj2hLDpV8Hot28SdoS2Q6p9dgsJFp29VC/vnmoCi kudjbu8hXrwVD/TWBgR4GhrIKFHPgGk3ll1BDDOILsZgdU+4Oe0L2qmNktijkJak oWs0rhjAMhRNKIUyH/xwrKMLvG4TKp3HQnZGCWM9uN8zIbf1r8uTkGQVDiERNrd/ sseuCqJ/CzzC7J05cc6KCVYDbeeKt6nGTEiJzD5s/F+ikMIHKQlUgcTJ7ruXbJg8 z1ALSkHbUV4wElLNpPpraSj/zwV2DAINWu7jwUu2r0Fg2yyYxFVFyFfwQ0ID3fKt Ri0nK9ovP9pC7FIrfCNMaCzMZX59Xi4SnAKaeg+veWjLzj0VQ1S1CUgTEiyu14sN e7SmvdMxOEJ1UI1T108k6lQmoAz7nElAf90eeD3bnxJymet2fPtYDnqEm/Pl3vgG BEwIxzjnzT88HVA= =5quM -----END PGP SIGNATURE----- Tue Nov 26 12:40:43 UTC 2024 I: Checking whether the package is not for us Tue Nov 26 12:40:43 UTC 2024 I: Starting 1st build on remote node infom02-amd64.debian.net. Tue Nov 26 12:40:43 UTC 2024 I: Preparing to do remote build '1' on infom02-amd64.debian.net. Tue Nov 26 12:40:43 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom02-amd64.debian.net is marked as down. Tue Nov 26 12:40:43 UTC 2024 - checking via ssh if infom02-amd64.debian.net is up. removed '/tmp/read-only-fs-test-9QiYEi' ==================================================================================== Mon Dec 29 19:03:45 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on infom02-amd64, called using "1 dazzdb trixie /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm 1.0+git20240115.be65e59-1" as arguments. Mon Dec 29 19:03:45 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-Wn9NZ4rX" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Dec 29 19:03:45 UTC 2025 I: Downloading source for trixie/dazzdb=1.0+git20240115.be65e59-1 Reading package lists... NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dazzdb.git Please use: git clone https://salsa.debian.org/med-team/dazzdb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 108 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (dsc) [2295 B] Get:2 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (tar) [98.9 kB] Get:3 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (diff) [7068 B] Fetched 108 kB in 0s (1128 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dazzdb.git Please use: git clone https://salsa.debian.org/med-team/dazzdb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 108 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (dsc) [2295 B] Get:2 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (tar) [98.9 kB] Get:3 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (diff) [7068 B] Fetched 108 kB in 0s (1128 kB/s) Download complete and in download only mode ============================================================================= Building dazzdb in trixie on amd64 on infom02-amd64 now. Date: Mon Dec 29 19:03:45 UTC 2025 Date UTC: Mon Dec 29 19:03:45 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 29 07:03:45 -12 2025 I: pbuilder-time-stamp: 1767035025 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dazzdb_1.0+git20240115.be65e59-1.dsc] I: copying [./dazzdb_1.0+git20240115.be65e59.orig.tar.xz] I: copying [./dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue May 28 20:31:31 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dazzdb_1.0+git20240115.be65e59-1.dsc: no acceptable signature found dpkg-source: info: extracting dazzdb in dazzdb-1.0+git20240115.be65e59 dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59.orig.tar.xz dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying append-cflags.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying destdir.patch dpkg-source: info: applying use-after-free.patch dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1942177/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='8ed71aa845574dcf90517a6a6835eae4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1942177' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_BiDr --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1 --logfile b1/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom02-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1942177/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 20.8 MB of archives. After unpacking 76.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 20.8 MB in 2s (11.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20240115.be65e59-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE rm -fr *.dSYM rm -f dazz.db.tar.gz make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j12 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz In file included from /usr/include/stdio.h:970, from fasta2DB.c:24: In function 'fprintf', inlined from 'main' at fasta2DB.c:438:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DB.c: In function 'main': fasta2DB.c:363:29: note: 'fname' was declared here 363 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen In file included from /usr/include/stdio.h:970, from fasta2DAM.c:24: In function 'fprintf', inlined from 'main' at fasta2DAM.c:400:21: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DAM.c: In function 'main': fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE ONElib.c: In function 'intGet': ONElib.c:3489:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 3489 | switch (u[0] & 0x07) | ^~~~~~ ONElib.c:3500:5: note: here 3500 | case 4: | ^~~~ ONElib.c: In function 'ltfRead': ONElib.c:3565:10: warning: 'val' may be used uninitialized [-Wmaybe-uninitialized] 3565 | return val ; | ^~~ ONElib.c:3545:7: note: 'val' was declared here 3545 | I64 val ; | ^~~ make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_install make -j12 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20240115.be65e59/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' install -d /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin make[2]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin && mv simulator dsimulator mkdir -p /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1 for command in /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin/*; \ do \ ln -s dazzdb.1 \ /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \ done make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo dpkg-genchanges --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1942177 and its subdirectories I: Current time: Mon Dec 29 07:04:36 -12 2025 I: pbuilder-time-stamp: 1767035076 Mon Dec 29 19:04:36 UTC 2025 I: Signing ./b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo as dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc Mon Dec 29 19:04:36 UTC 2025 I: Signed ./b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo as ./b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc Mon Dec 29 19:04:36 UTC 2025 - build #1 for dazzdb/trixie/amd64 on infom02-amd64 done. Starting cleanup. All cleanup done. Mon Dec 29 19:04:36 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Wn9NZ4rX, removing. /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 26 12:41 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 26 12:40 b2 -rw-r--r-- 1 jenkins jenkins 2295 May 28 20:41 dazzdb_1.0+git20240115.be65e59-1.dsc -rw------- 1 jenkins jenkins 3478 Nov 26 12:40 rbuildlog.Y6k0WdD /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1: total 2100 -rw-r--r-- 1 jenkins jenkins 30206 Nov 26 12:41 build.log -rw-r--r-- 1 jenkins jenkins 1745720 Nov 26 12:41 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb -rw-r--r-- 1 jenkins jenkins 7068 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2295 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1.dsc -rw-r--r-- 1 jenkins jenkins 5136 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6018 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1634 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 226484 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.deb -rw-r--r-- 1 jenkins jenkins 1806 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_source.changes -rw-r--r-- 1 jenkins jenkins 98924 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59.orig.tar.xz /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2: total 0 Tue Nov 26 12:41:37 UTC 2024 I: Deleting $TMPDIR on infom02-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 29 07:03:45 -12 2025 I: pbuilder-time-stamp: 1767035025 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dazzdb_1.0+git20240115.be65e59-1.dsc] I: copying [./dazzdb_1.0+git20240115.be65e59.orig.tar.xz] I: copying [./dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue May 28 20:31:31 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dazzdb_1.0+git20240115.be65e59-1.dsc: no acceptable signature found dpkg-source: info: extracting dazzdb in dazzdb-1.0+git20240115.be65e59 dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59.orig.tar.xz dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying append-cflags.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying destdir.patch dpkg-source: info: applying use-after-free.patch dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1942177/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='8ed71aa845574dcf90517a6a6835eae4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1942177' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_BiDr --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1 --logfile b1/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom02-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1942177/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 20.8 MB of archives. After unpacking 76.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 20.8 MB in 2s (11.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20240115.be65e59-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE rm -fr *.dSYM rm -f dazz.db.tar.gz make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j12 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz In file included from /usr/include/stdio.h:970, from fasta2DB.c:24: In function 'fprintf', inlined from 'main' at fasta2DB.c:438:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DB.c: In function 'main': fasta2DB.c:363:29: note: 'fname' was declared here 363 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen In file included from /usr/include/stdio.h:970, from fasta2DAM.c:24: In function 'fprintf', inlined from 'main' at fasta2DAM.c:400:21: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DAM.c: In function 'main': fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE ONElib.c: In function 'intGet': ONElib.c:3489:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 3489 | switch (u[0] & 0x07) | ^~~~~~ ONElib.c:3500:5: note: here 3500 | case 4: | ^~~~ ONElib.c: In function 'ltfRead': ONElib.c:3565:10: warning: 'val' may be used uninitialized [-Wmaybe-uninitialized] 3565 | return val ; | ^~~ ONElib.c:3545:7: note: 'val' was declared here 3545 | I64 val ; | ^~~ make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_install make -j12 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20240115.be65e59/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' install -d /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin make[2]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin && mv simulator dsimulator mkdir -p /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1 for command in /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin/*; \ do \ ln -s dazzdb.1 \ /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \ done make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo dpkg-genchanges --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1942177 and its subdirectories I: Current time: Mon Dec 29 07:04:36 -12 2025 I: pbuilder-time-stamp: 1767035076 Tue Nov 26 12:41:38 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom01-amd64.debian.net. Tue Nov 26 12:41:38 UTC 2024 I: Preparing to do remote build '2' on infom01-amd64.debian.net. Tue Nov 26 12:41:38 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom01-amd64.debian.net is marked as down. Tue Nov 26 12:41:38 UTC 2024 - checking via ssh if infom01-amd64.debian.net is up. removed '/tmp/read-only-fs-test-9iReHq' ==================================================================================== Tue Nov 26 12:41:39 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on infom01-amd64, called using "2 dazzdb trixie /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm 1.0+git20240115.be65e59-1" as arguments. Tue Nov 26 12:41:39 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-7nZhsGF0" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue Nov 26 12:41:39 UTC 2024 I: Downloading source for trixie/dazzdb=1.0+git20240115.be65e59-1 Reading package lists... NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dazzdb.git Please use: git clone https://salsa.debian.org/med-team/dazzdb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 108 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (dsc) [2295 B] Get:2 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (tar) [98.9 kB] Get:3 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (diff) [7068 B] Fetched 108 kB in 0s (1766 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'dazzdb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/dazzdb.git Please use: git clone https://salsa.debian.org/med-team/dazzdb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 108 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (dsc) [2295 B] Get:2 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (tar) [98.9 kB] Get:3 http://deb.debian.org/debian trixie/main dazzdb 1.0+git20240115.be65e59-1 (diff) [7068 B] Fetched 108 kB in 0s (1766 kB/s) Download complete and in download only mode ============================================================================= Re-Building dazzdb in trixie on amd64 on infom01-amd64 now. Date: Tue Nov 26 12:41:39 UTC 2024 Date UTC: Tue Nov 26 12:41:39 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_P7Ji + case ${ARCH} in + case $ARCH in + locale=et_EE + language=et + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' dazzdb = debian-installer -o dazzdb = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' dazzdb = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_P7Ji --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2 --logfile b2/build.log dazzdb_1.0+git20240115.be65e59-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 27 02:41:39 +14 2024 I: pbuilder-time-stamp: 1732624899 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dazzdb_1.0+git20240115.be65e59-1.dsc] I: copying [./dazzdb_1.0+git20240115.be65e59.orig.tar.xz] I: copying [./dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue May 28 20:31:31 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dazzdb_1.0+git20240115.be65e59-1.dsc: no acceptable signature found dpkg-source: info: extracting dazzdb in dazzdb-1.0+git20240115.be65e59 dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59.orig.tar.xz dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying append-cflags.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying destdir.patch dpkg-source: info: applying use-after-free.patch dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D01_modify_environment starting debug: Running on infom01-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 26 12:41 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=033eb431bf65427cad9bf80403c45437 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2662762 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_P7Ji --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2 --logfile b2/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 20.8 MB of archives. After unpacking 76.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 20.8 MB in 0s (53.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_amd64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20240115.be65e59-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE rm -fr *.dSYM rm -f dazz.db.tar.gz make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j12 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz In file included from /usr/include/stdio.h:970, from fasta2DB.c:24: In function 'fprintf', inlined from 'main' at fasta2DB.c:438:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DB.c: In function 'main': fasta2DB.c:363:29: note: 'fname' was declared here 363 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe In file included from /usr/include/stdio.h:970, from fasta2DAM.c:24: In function 'fprintf', inlined from 'main' at fasta2DAM.c:400:21: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DAM.c: In function 'main': fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE ONElib.c: In function 'intGet': ONElib.c:3489:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 3489 | switch (u[0] & 0x07) | ^~~~~~ ONElib.c:3500:5: note: here 3500 | case 4: | ^~~~ ONElib.c: In function 'ltfRead': ONElib.c:3565:10: warning: 'val' may be used uninitialized [-Wmaybe-uninitialized] 3565 | return val ; | ^~~ ONElib.c:3545:7: note: 'val' was declared here 3545 | I64 val ; | ^~~ make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_install make -j12 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20240115.be65e59/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' install -d /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin make[2]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin && mv simulator dsimulator mkdir -p /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1 for command in /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin/*; \ do \ ln -s dazzdb.1 \ /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \ done make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo dpkg-genchanges --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2662762 and its subdirectories I: Current time: Wed Nov 27 02:42:34 +14 2024 I: pbuilder-time-stamp: 1732624954 + false + set +x Tue Nov 26 12:42:34 UTC 2024 I: Signing ./b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo as dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc Tue Nov 26 12:42:34 UTC 2024 I: Signed ./b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo as ./b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc Tue Nov 26 12:42:34 UTC 2024 - build #2 for dazzdb/trixie/amd64 on infom01-amd64 done. Starting cleanup. All cleanup done. Tue Nov 26 12:42:34 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-7nZhsGF0, removing. /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm: total 48 drwxr-xr-x 2 jenkins jenkins 4096 Nov 26 12:41 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 26 12:42 b2 -rw-r--r-- 1 jenkins jenkins 2295 May 28 20:41 dazzdb_1.0+git20240115.be65e59-1.dsc -rw------- 1 jenkins jenkins 33973 Nov 26 12:41 rbuildlog.Y6k0WdD /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1: total 2112 -rw-r--r-- 1 jenkins jenkins 30206 Nov 26 12:41 build.log -rw-r--r-- 1 jenkins jenkins 1745720 Nov 26 12:41 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb -rw-r--r-- 1 jenkins jenkins 7068 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2295 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1.dsc -rw-r--r-- 1 jenkins jenkins 5136 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6018 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1634 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 226484 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_amd64.deb -rw-r--r-- 1 jenkins jenkins 1806 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59-1_source.changes -rw-r--r-- 1 jenkins jenkins 98924 Nov 26 12:41 dazzdb_1.0+git20240115.be65e59.orig.tar.xz /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2: total 2100 -rw-r--r-- 1 jenkins jenkins 32135 Nov 26 12:42 build.log -rw-r--r-- 1 jenkins jenkins 1745720 Nov 26 12:42 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb -rw-r--r-- 1 jenkins jenkins 7068 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2295 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1.dsc -rw-r--r-- 1 jenkins jenkins 5133 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo -rw-r--r-- 1 jenkins jenkins 6015 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1634 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1_amd64.changes -rw-r--r-- 1 jenkins jenkins 226484 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1_amd64.deb -rw-r--r-- 1 jenkins jenkins 1806 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59-1_source.changes -rw-r--r-- 1 jenkins jenkins 98924 Nov 26 12:42 dazzdb_1.0+git20240115.be65e59.orig.tar.xz Tue Nov 26 12:42:35 UTC 2024 I: Deleting $TMPDIR on infom01-amd64.debian.net. Tue Nov 26 12:42:35 UTC 2024 I: dazzdb_1.0+git20240115.be65e59-1_amd64.changes: Format: 1.8 Date: Tue, 28 May 2024 22:26:18 +0200 Source: dazzdb Binary: dazzdb dazzdb-dbgsym Architecture: amd64 Version: 1.0+git20240115.be65e59-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: dazzdb - manage nucleotide sequencing read data Changes: dazzdb (1.0+git20240115.be65e59-1) unstable; urgency=medium . * New upstream version 1.0+git20240115.be65e59 * d/control: declare compliance to standards version 4.7.0. * d/t/run-unit-test: update expected program output. Checksums-Sha1: e5a04f70d0f8f4cf16f2fc4079043339eb21796b 1745720 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb 59668517abdfc809835541597ece7beabea5ce33 5136 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo 3413337822721337a1b50970b846da0fe7704a73 226484 dazzdb_1.0+git20240115.be65e59-1_amd64.deb Checksums-Sha256: 14587c1e87585d08d8b4403f300d96666fd057c3c8fea4935014fab82cab6e38 1745720 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb e3ebe50a6befedb123ff1f4d48fd4bff991f612ba4fff23323ab645b91876fc1 5136 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo d316afbd983d86a847dd22e10969bed821c1583da078a26cc574df2feacdcb3d 226484 dazzdb_1.0+git20240115.be65e59-1_amd64.deb Files: 152d5d97105e4132fcca9905517a94f1 1745720 debug optional dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb 667746eaf0d2a22f066b3f1200fb4f38 5136 science optional dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo 26ff4108b9212f44a2a3fbba57e5ed08 226484 science optional dazzdb_1.0+git20240115.be65e59-1_amd64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-26 12:41:37.360613453 +0000 +++ b2/build.log 2024-11-26 12:42:34.942014913 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 29 07:03:45 -12 2025 -I: pbuilder-time-stamp: 1767035025 +I: Current time: Wed Nov 27 02:41:39 +14 2024 +I: pbuilder-time-stamp: 1732624899 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -32,51 +32,83 @@ dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1942177/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 26 12:41 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='8ed71aa845574dcf90517a6a6835eae4' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1942177' - PS1='# ' - PS2='> ' + INVOCATION_ID=033eb431bf65427cad9bf80403c45437 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2662762 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_BiDr --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1 --logfile b1/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/pbuilderrc_P7Ji --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2 --logfile b2/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1942177/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -144,7 +176,7 @@ Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] -Fetched 20.8 MB in 2s (11.2 MB/s) +Fetched 20.8 MB in 0s (53.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19969 files and directories currently installed.) @@ -279,7 +311,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20240115.be65e59-1 dpkg-buildpackage: info: source distribution unstable @@ -333,6 +369,9 @@ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe In file included from /usr/include/stdio.h:970, from fasta2DAM.c:24: In function 'fprintf', @@ -346,9 +385,6 @@ fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE ONElib.c: In function 'intGet': @@ -411,12 +447,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2662762/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1942177 and its subdirectories -I: Current time: Mon Dec 29 07:04:36 -12 2025 -I: pbuilder-time-stamp: 1767035076 +I: removing directory /srv/workspace/pbuilder/2662762 and its subdirectories +I: Current time: Wed Nov 27 02:42:34 +14 2024 +I: pbuilder-time-stamp: 1732624954 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.diff: 74.2% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.diff.gz b2/build.log: 79.3% -- replaced with stdout Compressing the 1st log... b1/build.log: 80.2% -- replaced with stdout Tue Nov 26 12:42:36 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_dazzdb_trixie_amd64_1732624956 + touch /var/log/reproducible-builds/diffoscope_stamp_dazzdb_trixie_amd64_1732624956 + RESULT=0 + systemd-run '--description=diffoscope on dazzdb/1.0+git20240115.be65e59-1 in trixie/amd64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-amd64_38-35374 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm --run-session -c jenkins-reproducible-trixie-diffoscope-60078206-d99d-4f57-b0bf-f53b9f2572b8 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dbd-tmp-8eBLS88 ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dazzdb_1.0+git20240115.be65e59-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dazzdb_1.0+git20240115.be65e59-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dazzdb_1.0+git20240115.be65e59-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1/dazzdb_1.0+git20240115.be65e59-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2/dazzdb_1.0+git20240115.be65e59-1_amd64.changes' + false + set +x Running as unit: rb-diffoscope-amd64_38-35374.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dazzdb_1.0+git20240115.be65e59-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dazzdb_1.0+git20240115.be65e59-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/dazzdb_1.0+git20240115.be65e59-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b1/dazzdb_1.0+git20240115.be65e59-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.qC46LMtm/b2/dazzdb_1.0+git20240115.be65e59-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.374s) 0.374s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.041s) 0.041s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 693ms CPU time consumed: 665ms _ _ _ __| | __ _ __________| | |__ / _` |/ _` |_ /_ / _` | '_ \ | (_| | (_| |/ / / / (_| | |_) | \__,_|\__,_/___/___\__,_|_.__/ Tue Nov 26 12:42:37 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Tue Nov 26 12:42:37 UTC 2024 I: dazzdb from trixie built successfully and reproducibly on amd64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-26 12:42:38] INFO: Starting at 2024-11-26 12:42:38.503167 [2024-11-26 12:42:38] INFO: Generating the pages of 1 package(s) [2024-11-26 12:42:38] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/amd64/dazzdb didn't produce a buildlog, even though it has been built. [2024-11-26 12:42:38] INFO: Finished at 2024-11-26 12:42:38.940013, took: 0:00:00.436853 Tue Nov 26 12:42:39 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/amd64/dazzdb.html Tue Nov 26 12:42:39 UTC 2024 I: Submitting .buildinfo files to external archives: Tue Nov 26 12:42:39 UTC 2024 I: Submitting 8.0K b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc https://buildinfo.debian.net/59668517abdfc809835541597ece7beabea5ce33/dazzdb_1.0+git20240115.be65e59-1_amd64 Tue Nov 26 12:42:40 UTC 2024 I: Submitting 8.0K b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc https://buildinfo.debian.net/34aeb1641bd1a5b4c966ef142eed15142ae40211/dazzdb_1.0+git20240115.be65e59-1_amd64 Tue Nov 26 12:42:41 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Nov 26 12:42:41 UTC 2024 I: Done submitting .buildinfo files. Tue Nov 26 12:42:41 UTC 2024 I: Removing signed dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc files: removed './b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc' removed './b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc' 1732624961 amd64 trixie dazzdb Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.rbuild.log: 76.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/amd64/dazzdb_1.0+git20240115.be65e59-1.rbuild.log.gz [2024-11-26 12:42:41] INFO: Starting at 2024-11-26 12:42:41.911706 [2024-11-26 12:42:41] INFO: Generating the pages of 1 package(s) [2024-11-26 12:42:42] INFO: Finished at 2024-11-26 12:42:42.398917, took: 0:00:00.487218 All cleanup done. Tue Nov 26 12:42:42 UTC 2024 - total duration: 0h 2m 11s. Tue Nov 26 12:42:42 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-MkDiSQV9, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 16.482s CPU time consumed: 7.330s