Running as unit: rb-build-arm64_12-112327.service ==================================================================================== Thu Jul 31 12:19:10 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_12) on jenkins, called using "codethink04-arm64 codethink03-arm64" as arguments. Thu Jul 31 12:19:10 UTC 2025 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-MS1tpPc4" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Jul 31 12:19:10 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Thu Jul 31 12:19:10 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-5u4NE5' Thu Jul 31 12:19:11 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Thu Jul 31 12:19:11 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-ITgkK0' ok, let's check if tandem-mass is building anywhere yet… ok, tandem-mass is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of tandem-mass in trixie on arm64 on jenkins now. 1st build will be done on codethink04-arm64.debian.net. 2nd build will be done on codethink03-arm64.debian.net. ============================================================================= Thu Jul 31 12:19:25 UTC 2025 I: starting to build tandem-mass/trixie/arm64 on jenkins on '2025-07-31 12:19' Thu Jul 31 12:19:25 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_12/112327/console.log 1753964365 arm64 trixie tandem-mass Thu Jul 31 12:19:25 UTC 2025 I: Downloading source for trixie/tandem-mass=1:201702011-1 --2025-07-31 12:19:26-- http://deb.debian.org/debian/pool/main/t/tandem-mass/tandem-mass_201702011-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2031 (2.0K) [text/prs.lines.tag] Saving to: ‘tandem-mass_201702011-1.dsc’ 0K . 100% 249M=0s 2025-07-31 12:19:26 (249 MB/s) - ‘tandem-mass_201702011-1.dsc’ saved [2031/2031] --2025-07-31 12:19:26-- http://deb.debian.org/debian/pool/main/t/tandem-mass/tandem-mass_201702011-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2031 (2.0K) [text/prs.lines.tag] Saving to: ‘tandem-mass_201702011-1.dsc’ 0K . 100% 249M=0s 2025-07-31 12:19:26 (249 MB/s) - ‘tandem-mass_201702011-1.dsc’ saved [2031/2031] Thu Jul 31 12:19:26 UTC 2025 I: tandem-mass_201702011-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: tandem-mass Binary: tandem-mass Architecture: any Version: 1:201702011-1 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: http://www.thegpm.org/TANDEM/ Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/debichem-team/tandem-mass.git Vcs-Git: https://salsa.debian.org/debichem-team/tandem-mass.git Build-Depends: debhelper (>= 9.20151219), dpkg-dev (>= 1.16.1~), libexpat1-dev (>= 2.0.1) Package-List: tandem-mass deb science optional arch=any Checksums-Sha1: f91dbc532612bf55a8b18c403d6e68628f8adb11 2665884 tandem-mass_201702011.orig.tar.gz acb136a7561bcf48fd0d4cecc3d8d8dacd0cc8c8 13900 tandem-mass_201702011-1.debian.tar.xz Checksums-Sha256: 073f50fd86d11bdb4fcd4811fc8245516ec81ab4e13a6ecef37792d684247ae8 2665884 tandem-mass_201702011.orig.tar.gz 7bce4e25599a224baafcb9afb010eb79f7b8a22a4cde3f3fa5ad2fccdd8ae540 13900 tandem-mass_201702011-1.debian.tar.xz Files: 901c94dc228f51124ed60cbcfa97da4b 2665884 tandem-mass_201702011.orig.tar.gz 07feb5f8792050b987e676b2df7bbeeb 13900 tandem-mass_201702011-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEsFMwThfW1Bndm0ZRQatITXaUz0IFAlvxIL4ACgkQQatITXaU z0KHaQ//fap2mfsQ9jd+I/CCCcfAlGgL9GNhHWhnUHh728e1Y9Q9ht6asYB5Qmqj YeXrDcwtfkpMN+BR7cJV/+XnaMkQvGDn3VvbRd0+HtlZzOJQ+19XPXBZQiKkZE+d 3xPKo6Rokh+gBzatYWos6DDA6JefWJVPU+OoDb5MG6bVLN2MdxZqW48uT/vjYe+d 8Yv6mUw7BBYbfnJ+eBrkEpXaYwvMpcnhXIU5YLbdjvJcyWiISFpohHy4EA57dLQ/ r03rf+Xe98G1hfsPxurHxsz+J5w6BRPMEIjGCfazDO2yZ2myzall0AGHpH57AnRr 5c5StI1Z7AowkGY6KawAcEqGDNKh7SLFKyOC6Uqgtvg9SNU/HJZsn99Ogxgj1akg V7Nwh0wDLi/TvwHDKfPEppQdTs5CzzsjHpVVCykel+BBZHcyFpCTcl6i7buecZrn PeqBfenYC4L1TQztkUl6X2uRE3p4V/4CLvOCq6QMX7A+6T/Z4OTkA8Xa7y35rUzS mY7NTrJ+5PL+21r5P5ganp//gD/4NBhIJ4GpNXoG6aupnWm/p5+bwokBjHqWQsCB wlr+JjnGagkZ50jWjHmOvORGH0DMkMfhu3A3S5+1Z+Be16uViR2d/Lb/7rTtqFbg DZTdaEf2ip2q+R/vGmLP6+sVcEhIfmGSZ86PeHu6gis2Y0DrGjo= =NqYV -----END PGP SIGNATURE----- Thu Jul 31 12:19:26 UTC 2025 I: Checking whether the package is not for us Thu Jul 31 12:19:26 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Thu Jul 31 12:19:26 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Thu Jul 31 12:19:26 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Thu Jul 31 12:19:26 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-RwYviL' ==================================================================================== Thu Jul 31 12:19:27 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink04-arm64, called using "1 tandem-mass trixie /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa 1:201702011-1" as arguments. Thu Jul 31 12:19:27 UTC 2025 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-2xy4pkFI" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Jul 31 12:19:27 UTC 2025 I: Downloading source for trixie/tandem-mass=1:201702011-1 Reading package lists... NOTICE: 'tandem-mass' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/tandem-mass.git Please use: git clone https://salsa.debian.org/debichem-team/tandem-mass.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2682 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (dsc) [2031 B] Get:2 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (tar) [2666 kB] Get:3 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (diff) [13.9 kB] Fetched 2682 kB in 0s (15.3 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'tandem-mass' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/tandem-mass.git Please use: git clone https://salsa.debian.org/debichem-team/tandem-mass.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2682 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (dsc) [2031 B] Get:2 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (tar) [2666 kB] Get:3 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (diff) [13.9 kB] Fetched 2682 kB in 0s (15.3 MB/s) Download complete and in download only mode ============================================================================= Building tandem-mass in trixie on arm64 on codethink04-arm64 now. Date: Thu Jul 31 13:19:27 BST 2025 Date UTC: Thu Jul 31 12:19:27 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 31 00:19:28 -12 2025 I: pbuilder-time-stamp: 1753964368 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [tandem-mass_201702011-1.dsc] I: copying [./tandem-mass_201702011.orig.tar.gz] I: copying [./tandem-mass_201702011-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./tandem-mass_201702011-1.dsc: no acceptable signature found dpkg-source: info: extracting tandem-mass in tandem-mass-201702011 dpkg-source: info: unpacking tandem-mass_201702011.orig.tar.gz dpkg-source: info: unpacking tandem-mass_201702011-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian-makefile dpkg-source: info: applying fix-missing-include-string-h dpkg-source: info: applying nullptr-fixes I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/781175/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='c3d9a1c439a843abbfdd62e0dab5c8dd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='781175' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_YKOa --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1 --logfile b1/build.log tandem-mass_201702011-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/781175/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9.20151219), dpkg-dev (>= 1.16.1~), libexpat1-dev (>= 2.0.1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9.20151219); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev (>= 2.0.1); however: Package libexpat1-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 11.2 MB of archives. After unpacking 45.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-4 [862 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-4 [539 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-2.1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.2 [919 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.7.1-2 [145 kB] Fetched 11.2 MB in 0s (74.6 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../00-libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.23.1-2_arm64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.41-5_arm64.deb ... Unpacking bsdextrautils (2.41-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../24-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-2.1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../30-libexpat1-dev_2.7.1-2_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.7.1-2) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libexpat1-dev:arm64 (2.7.1-2) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.1-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/tandem-mass-201702011/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../tandem-mass_201702011-1_source.changes dpkg-buildpackage: info: source package tandem-mass dpkg-buildpackage: info: source version 1:201702011-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh_testdir dh_testroot dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ dh_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use) rm -f -- debian/tandem-mass.substvars debian/files rm -fr -- debian/tandem-mass/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f bin/tandem rm -f src/*.d src/*.o rm -f build-stamp debian/rules binary dh_testdir dh_prep rm -f -- debian/tandem-mass.substvars rm -fr -- debian/.debhelper/generated/tandem-mass/ debian/tandem-mass/ debian/tmp/ dh_auto_build --sourcedirectory=src --buildsystem=makefile -- -f Makefile_ubuntu dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd src && make -j1 -f Makefile_ubuntu make[1]: Entering directory '/build/reproducible-path/tandem-mass-201702011/src' g++ -M -g -w -O2 MSNumpress.cpp > MSNumpress.d g++ -M -g -w -O2 MSNumpress.cpp | sed s/\\.o/.d/ > MSNumpress.d g++ -M -g -w -O2 base64.cpp > base64.d g++ -M -g -w -O2 base64.cpp | sed s/\\.o/.d/ > base64.d g++ -M -g -w -O2 loadmspectrum.cpp > loadmspectrum.d g++ -M -g -w -O2 loadmspectrum.cpp | sed s/\\.o/.d/ > loadmspectrum.d g++ -M -g -w -O2 masscalc.cpp > masscalc.d g++ -M -g -w -O2 masscalc.cpp | sed s/\\.o/.d/ > masscalc.d g++ -M -g -w -O2 mbiomlreport.cpp > mbiomlreport.d g++ -M -g -w -O2 mbiomlreport.cpp | sed s/\\.o/.d/ > mbiomlreport.d g++ -M -g -w -O2 mpam.cpp > mpam.d g++ -M -g -w -O2 mpam.cpp | sed s/\\.o/.d/ > mpam.d g++ -M -g -w -O2 mplugin.cpp > mplugin.d g++ -M -g -w -O2 mplugin.cpp | sed s/\\.o/.d/ > mplugin.d g++ -M -g -w -O2 mpmods.cpp > mpmods.d g++ -M -g -w -O2 mpmods.cpp | sed s/\\.o/.d/ > mpmods.d g++ -M -g -w -O2 mprocess.cpp > mprocess.d g++ -M -g -w -O2 mprocess.cpp | sed s/\\.o/.d/ > mprocess.d g++ -M -g -w -O2 mrefine.cpp > mrefine.d g++ -M -g -w -O2 mrefine.cpp | sed s/\\.o/.d/ > mrefine.d g++ -M -g -w -O2 mreport.cpp > mreport.d g++ -M -g -w -O2 mreport.cpp | sed s/\\.o/.d/ > mreport.d g++ -M -g -w -O2 mscore.cpp > mscore.d g++ -M -g -w -O2 mscore.cpp | sed s/\\.o/.d/ > mscore.d g++ -M -g -w -O2 mscore_tandem.cpp > mscore_tandem.d g++ -M -g -w -O2 mscore_tandem.cpp | sed s/\\.o/.d/ > mscore_tandem.d g++ -M -g -w -O2 msequencecollection.cpp > msequencecollection.d g++ -M -g -w -O2 msequencecollection.cpp | sed s/\\.o/.d/ > msequencecollection.d g++ -M -g -w -O2 msequenceserver.cpp > msequenceserver.d g++ -M -g -w -O2 msequenceserver.cpp | sed s/\\.o/.d/ > msequenceserver.d g++ -M -g -w -O2 msequtilities.cpp > msequtilities.d g++ -M -g -w -O2 msequtilities.cpp | sed s/\\.o/.d/ > msequtilities.d g++ -M -g -w -O2 mspectrumcondition.cpp > mspectrumcondition.d g++ -M -g -w -O2 mspectrumcondition.cpp | sed s/\\.o/.d/ > mspectrumcondition.d g++ -M -g -w -O2 mtermmods.cpp > mtermmods.d g++ -M -g -w -O2 mtermmods.cpp | sed s/\\.o/.d/ > mtermmods.d g++ -M -g -w -O2 mxxcleavage.cpp > mxxcleavage.d g++ -M -g -w -O2 mxxcleavage.cpp | sed s/\\.o/.d/ > mxxcleavage.d g++ -M -g -w -O2 mzid_report.cpp > mzid_report.d g++ -M -g -w -O2 mzid_report.cpp | sed s/\\.o/.d/ > mzid_report.d g++ -M -g -w -O2 p3.cpp > p3.d g++ -M -g -w -O2 p3.cpp | sed s/\\.o/.d/ > p3.d g++ -M -g -w -O2 p3mprocess.cpp > p3mprocess.d g++ -M -g -w -O2 p3mprocess.cpp | sed s/\\.o/.d/ > p3mprocess.d g++ -M -g -w -O2 p3msequenceserver.cpp > p3msequenceserver.d g++ -M -g -w -O2 p3msequenceserver.cpp | sed s/\\.o/.d/ > p3msequenceserver.d g++ -M -g -w -O2 saxbiomlhandler.cpp > saxbiomlhandler.d g++ -M -g -w -O2 saxbiomlhandler.cpp | sed s/\\.o/.d/ > saxbiomlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp > saxgamlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp | sed s/\\.o/.d/ > saxgamlhandler.d g++ -M -g -w -O2 saxhandler.cpp > saxhandler.d g++ -M -g -w -O2 saxhandler.cpp | sed s/\\.o/.d/ > saxhandler.d g++ -M -g -w -O2 saxmodhandler.cpp > saxmodhandler.d g++ -M -g -w -O2 saxmodhandler.cpp | sed s/\\.o/.d/ > saxmodhandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp > saxmzdatahandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp | sed s/\\.o/.d/ > saxmzdatahandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp > saxmzmlhandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp | sed s/\\.o/.d/ > saxmzmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp > saxmzxmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp | sed s/\\.o/.d/ > saxmzxmlhandler.d g++ -M -g -w -O2 saxsaphandler.cpp > saxsaphandler.d g++ -M -g -w -O2 saxsaphandler.cpp | sed s/\\.o/.d/ > saxsaphandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp > saxtandeminputhandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp | sed s/\\.o/.d/ > saxtandeminputhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp > saxtaxhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp | sed s/\\.o/.d/ > saxtaxhandler.d g++ -M -g -w -O2 stdafx.cpp > stdafx.d g++ -M -g -w -O2 stdafx.cpp | sed s/\\.o/.d/ > stdafx.d g++ -M -g -w -O2 tandem.cpp > tandem.d g++ -M -g -w -O2 tandem.cpp | sed s/\\.o/.d/ > tandem.d g++ -M -g -w -O2 xmlparameter.cpp > xmlparameter.d g++ -M -g -w -O2 xmlparameter.cpp | sed s/\\.o/.d/ > xmlparameter.d g++ -M -g -w -O2 xmltaxonomy.cpp > xmltaxonomy.d g++ -M -g -w -O2 xmltaxonomy.cpp | sed s/\\.o/.d/ > xmltaxonomy.d g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o MSNumpress.o MSNumpress.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o base64.o base64.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadmspectrum.o loadmspectrum.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o masscalc.o masscalc.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mbiomlreport.o mbiomlreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpam.o mpam.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mplugin.o mplugin.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpmods.o mpmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mprocess.o mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mrefine.o mrefine.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mreport.o mreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore.o mscore.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore_tandem.o mscore_tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequencecollection.o msequencecollection.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequenceserver.o msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequtilities.o msequtilities.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mspectrumcondition.o mspectrumcondition.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mtermmods.o mtermmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mxxcleavage.o mxxcleavage.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mzid_report.o mzid_report.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3.o p3.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3mprocess.o p3mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3msequenceserver.o p3msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxbiomlhandler.o saxbiomlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxgamlhandler.o saxgamlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxhandler.o saxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmodhandler.o saxmodhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzdatahandler.o saxmzdatahandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzmlhandler.o saxmzmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzxmlhandler.o saxmzxmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxsaphandler.o saxsaphandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtandeminputhandler.o saxtandeminputhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtaxhandler.o saxtaxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdafx.o stdafx.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tandem.o tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmlparameter.o xmlparameter.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmltaxonomy.o xmltaxonomy.cpp g++ -g -w -O2 -o ../bin/tandem MSNumpress.o base64.o loadmspectrum.o masscalc.o mbiomlreport.o mpam.o mplugin.o mpmods.o mprocess.o mrefine.o mreport.o mscore.o mscore_tandem.o msequencecollection.o msequenceserver.o msequtilities.o mspectrumcondition.o mtermmods.o mxxcleavage.o mzid_report.o p3.o p3mprocess.o p3msequenceserver.o saxbiomlhandler.o saxgamlhandler.o saxhandler.o saxmodhandler.o saxmzdatahandler.o saxmzmlhandler.o saxmzxmlhandler.o saxsaphandler.o saxtandeminputhandler.o saxtaxhandler.o stdafx.o tandem.o xmlparameter.o xmltaxonomy.o -lpthread -L/usr/lib -lm -lexpat make[1]: Leaving directory '/build/reproducible-path/tandem-mass-201702011/src' touch build-stamp dh_testdir dh_testroot dh_installchangelogs dh_installchangelogs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/doc/tandem-mass install -p -m0644 debian/.debhelper/generated/tandem-mass/dh_installchangelogs.dch.trimmed debian/tandem-mass/usr/share/doc/tandem-mass/changelog.Debian dh_installdocs dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -p -m0644 debian/copyright debian/tandem-mass/usr/share/doc/tandem-mass/copyright dh_installexamples dh_installexamples: warning: Compatibility levels before 10 are deprecated (level 9 in use) dh_install dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/bin cp --reflink=auto -a ./bin/tandem debian/tandem-mass/usr/bin/ dh_installman dh_installman: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/man/man1/ install -p -m0644 ./debian/tandem.1 debian/tandem-mass/usr/share/man/man1/tandem.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 mv debian/tandem-mass/usr/share/man/man1/tandem.1.dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 chmod 0644 -- debian/tandem-mass/usr/share/man/man1/tandem.1 dh_lintian dh_lintian: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/lintian/overrides install -p -m0644 debian/tandem-mass.lintian-overrides debian/tandem-mass/usr/share/lintian/overrides/tandem-mass dh_strip -a dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad objcopy --only-keep-debug --compress-debug-sections debian/tandem-mass/usr/bin/tandem debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug strip --remove-section=.comment --remove-section=.note debian/tandem-mass/usr/bin/tandem objcopy --add-gnu-debuglink debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug debian/tandem-mass/usr/bin/tandem install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc ln -s tandem-mass debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc/tandem-mass-dbgsym install -m0755 -d debian/.debhelper/tandem-mass dh_compress dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/tandem-mass chmod a-x usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 gzip -9nf usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 cd '/build/reproducible-path/tandem-mass-201702011' dh_fixperms find debian/tandem-mass ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tandem-mass/usr/share/doc -type f -a -true -a ! -regex 'debian/tandem-mass/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tandem-mass/usr/share/man debian/tandem-mass/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_installdeb dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN dh_shlibdeps dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN dpkg-shlibdeps -Tdebian/tandem-mass.substvars debian/tandem-mass/usr/bin/tandem dh_gencontrol dh_gencontrol: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN echo misc:Depends= >> debian/tandem-mass.substvars echo misc:Pre-Depends= >> debian/tandem-mass.substvars install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -cdebian/control -Pdebian/.debhelper/tandem-mass/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=tandem-mass-dbgsym "-DDepends=tandem-mass (= \${binary:Version})" "-DDescription=debug symbols for tandem-mass" -DBuild-Ids=ad24df061b3d9ec26144478c94e7afff6061cf8b -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -cdebian/control -Pdebian/tandem-mass chmod 0644 -- debian/tandem-mass/DEBIAN/control dh_md5sums install -m0755 -d debian/tandem-mass/DEBIAN cd debian/tandem-mass >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tandem-mass/DEBIAN/md5sums install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN cd debian/.debhelper/tandem-mass/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/tandem-mass .. dpkg-deb --root-owner-group --build debian/.debhelper/tandem-mass/dbgsym-root .. dpkg-deb: building package 'tandem-mass' in '../tandem-mass_201702011-1_arm64.deb'. dpkg-deb: building package 'tandem-mass-dbgsym' in '../tandem-mass-dbgsym_201702011-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../tandem-mass_201702011-1_arm64.buildinfo dpkg-genchanges --build=binary -O../tandem-mass_201702011-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/781175 and its subdirectories I: Current time: Thu Jul 31 00:21:10 -12 2025 I: pbuilder-time-stamp: 1753964470 Thu Jul 31 12:21:10 UTC 2025 I: Signing ./b1/tandem-mass_201702011-1_arm64.buildinfo as tandem-mass_201702011-1_arm64.buildinfo.asc Thu Jul 31 12:21:10 UTC 2025 I: Signed ./b1/tandem-mass_201702011-1_arm64.buildinfo as ./b1/tandem-mass_201702011-1_arm64.buildinfo.asc Thu Jul 31 12:21:10 UTC 2025 - build #1 for tandem-mass/trixie/arm64 on codethink04-arm64 done. Starting cleanup. All cleanup done. Thu Jul 31 12:21:10 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-2xy4pkFI, removing. /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Jul 31 12:21 b1 drwxr-xr-x 2 jenkins jenkins 4096 Jul 31 12:19 b2 -rw------- 1 jenkins jenkins 3188 Jul 31 12:19 rbuildlog.iaq0mRG -rw-r--r-- 1 jenkins jenkins 2031 Nov 18 2018 tandem-mass_201702011-1.dsc /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1: total 7068 -rw-r--r-- 1 jenkins jenkins 33180 Jul 31 12:21 build.log -rw-r--r-- 1 jenkins jenkins 4295124 Jul 31 12:21 tandem-mass-dbgsym_201702011-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 13900 Jul 31 12:21 tandem-mass_201702011-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2031 Jul 31 12:21 tandem-mass_201702011-1.dsc -rw-r--r-- 1 jenkins jenkins 4972 Jul 31 12:21 tandem-mass_201702011-1_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5854 Jul 31 12:21 tandem-mass_201702011-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1562 Jul 31 12:21 tandem-mass_201702011-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 189080 Jul 31 12:21 tandem-mass_201702011-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 1690 Jul 31 12:21 tandem-mass_201702011-1_source.changes -rw-r--r-- 1 jenkins jenkins 2665884 Jul 31 12:21 tandem-mass_201702011.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2: total 0 Thu Jul 31 12:21:13 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 31 00:19:28 -12 2025 I: pbuilder-time-stamp: 1753964368 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [tandem-mass_201702011-1.dsc] I: copying [./tandem-mass_201702011.orig.tar.gz] I: copying [./tandem-mass_201702011-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./tandem-mass_201702011-1.dsc: no acceptable signature found dpkg-source: info: extracting tandem-mass in tandem-mass-201702011 dpkg-source: info: unpacking tandem-mass_201702011.orig.tar.gz dpkg-source: info: unpacking tandem-mass_201702011-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian-makefile dpkg-source: info: applying fix-missing-include-string-h dpkg-source: info: applying nullptr-fixes I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/781175/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='c3d9a1c439a843abbfdd62e0dab5c8dd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='781175' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_YKOa --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1 --logfile b1/build.log tandem-mass_201702011-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/781175/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9.20151219), dpkg-dev (>= 1.16.1~), libexpat1-dev (>= 2.0.1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9.20151219); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev (>= 2.0.1); however: Package libexpat1-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 11.2 MB of archives. After unpacking 45.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-4 [862 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-4 [539 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-2.1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.2 [919 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.7.1-2 [145 kB] Fetched 11.2 MB in 0s (74.6 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../00-libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.23.1-2_arm64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.41-5_arm64.deb ... Unpacking bsdextrautils (2.41-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../24-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-2.1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../30-libexpat1-dev_2.7.1-2_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.7.1-2) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libexpat1-dev:arm64 (2.7.1-2) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.1-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/tandem-mass-201702011/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../tandem-mass_201702011-1_source.changes dpkg-buildpackage: info: source package tandem-mass dpkg-buildpackage: info: source version 1:201702011-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh_testdir dh_testroot dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ dh_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use) rm -f -- debian/tandem-mass.substvars debian/files rm -fr -- debian/tandem-mass/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f bin/tandem rm -f src/*.d src/*.o rm -f build-stamp debian/rules binary dh_testdir dh_prep rm -f -- debian/tandem-mass.substvars rm -fr -- debian/.debhelper/generated/tandem-mass/ debian/tandem-mass/ debian/tmp/ dh_auto_build --sourcedirectory=src --buildsystem=makefile -- -f Makefile_ubuntu dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd src && make -j1 -f Makefile_ubuntu make[1]: Entering directory '/build/reproducible-path/tandem-mass-201702011/src' g++ -M -g -w -O2 MSNumpress.cpp > MSNumpress.d g++ -M -g -w -O2 MSNumpress.cpp | sed s/\\.o/.d/ > MSNumpress.d g++ -M -g -w -O2 base64.cpp > base64.d g++ -M -g -w -O2 base64.cpp | sed s/\\.o/.d/ > base64.d g++ -M -g -w -O2 loadmspectrum.cpp > loadmspectrum.d g++ -M -g -w -O2 loadmspectrum.cpp | sed s/\\.o/.d/ > loadmspectrum.d g++ -M -g -w -O2 masscalc.cpp > masscalc.d g++ -M -g -w -O2 masscalc.cpp | sed s/\\.o/.d/ > masscalc.d g++ -M -g -w -O2 mbiomlreport.cpp > mbiomlreport.d g++ -M -g -w -O2 mbiomlreport.cpp | sed s/\\.o/.d/ > mbiomlreport.d g++ -M -g -w -O2 mpam.cpp > mpam.d g++ -M -g -w -O2 mpam.cpp | sed s/\\.o/.d/ > mpam.d g++ -M -g -w -O2 mplugin.cpp > mplugin.d g++ -M -g -w -O2 mplugin.cpp | sed s/\\.o/.d/ > mplugin.d g++ -M -g -w -O2 mpmods.cpp > mpmods.d g++ -M -g -w -O2 mpmods.cpp | sed s/\\.o/.d/ > mpmods.d g++ -M -g -w -O2 mprocess.cpp > mprocess.d g++ -M -g -w -O2 mprocess.cpp | sed s/\\.o/.d/ > mprocess.d g++ -M -g -w -O2 mrefine.cpp > mrefine.d g++ -M -g -w -O2 mrefine.cpp | sed s/\\.o/.d/ > mrefine.d g++ -M -g -w -O2 mreport.cpp > mreport.d g++ -M -g -w -O2 mreport.cpp | sed s/\\.o/.d/ > mreport.d g++ -M -g -w -O2 mscore.cpp > mscore.d g++ -M -g -w -O2 mscore.cpp | sed s/\\.o/.d/ > mscore.d g++ -M -g -w -O2 mscore_tandem.cpp > mscore_tandem.d g++ -M -g -w -O2 mscore_tandem.cpp | sed s/\\.o/.d/ > mscore_tandem.d g++ -M -g -w -O2 msequencecollection.cpp > msequencecollection.d g++ -M -g -w -O2 msequencecollection.cpp | sed s/\\.o/.d/ > msequencecollection.d g++ -M -g -w -O2 msequenceserver.cpp > msequenceserver.d g++ -M -g -w -O2 msequenceserver.cpp | sed s/\\.o/.d/ > msequenceserver.d g++ -M -g -w -O2 msequtilities.cpp > msequtilities.d g++ -M -g -w -O2 msequtilities.cpp | sed s/\\.o/.d/ > msequtilities.d g++ -M -g -w -O2 mspectrumcondition.cpp > mspectrumcondition.d g++ -M -g -w -O2 mspectrumcondition.cpp | sed s/\\.o/.d/ > mspectrumcondition.d g++ -M -g -w -O2 mtermmods.cpp > mtermmods.d g++ -M -g -w -O2 mtermmods.cpp | sed s/\\.o/.d/ > mtermmods.d g++ -M -g -w -O2 mxxcleavage.cpp > mxxcleavage.d g++ -M -g -w -O2 mxxcleavage.cpp | sed s/\\.o/.d/ > mxxcleavage.d g++ -M -g -w -O2 mzid_report.cpp > mzid_report.d g++ -M -g -w -O2 mzid_report.cpp | sed s/\\.o/.d/ > mzid_report.d g++ -M -g -w -O2 p3.cpp > p3.d g++ -M -g -w -O2 p3.cpp | sed s/\\.o/.d/ > p3.d g++ -M -g -w -O2 p3mprocess.cpp > p3mprocess.d g++ -M -g -w -O2 p3mprocess.cpp | sed s/\\.o/.d/ > p3mprocess.d g++ -M -g -w -O2 p3msequenceserver.cpp > p3msequenceserver.d g++ -M -g -w -O2 p3msequenceserver.cpp | sed s/\\.o/.d/ > p3msequenceserver.d g++ -M -g -w -O2 saxbiomlhandler.cpp > saxbiomlhandler.d g++ -M -g -w -O2 saxbiomlhandler.cpp | sed s/\\.o/.d/ > saxbiomlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp > saxgamlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp | sed s/\\.o/.d/ > saxgamlhandler.d g++ -M -g -w -O2 saxhandler.cpp > saxhandler.d g++ -M -g -w -O2 saxhandler.cpp | sed s/\\.o/.d/ > saxhandler.d g++ -M -g -w -O2 saxmodhandler.cpp > saxmodhandler.d g++ -M -g -w -O2 saxmodhandler.cpp | sed s/\\.o/.d/ > saxmodhandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp > saxmzdatahandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp | sed s/\\.o/.d/ > saxmzdatahandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp > saxmzmlhandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp | sed s/\\.o/.d/ > saxmzmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp > saxmzxmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp | sed s/\\.o/.d/ > saxmzxmlhandler.d g++ -M -g -w -O2 saxsaphandler.cpp > saxsaphandler.d g++ -M -g -w -O2 saxsaphandler.cpp | sed s/\\.o/.d/ > saxsaphandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp > saxtandeminputhandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp | sed s/\\.o/.d/ > saxtandeminputhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp > saxtaxhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp | sed s/\\.o/.d/ > saxtaxhandler.d g++ -M -g -w -O2 stdafx.cpp > stdafx.d g++ -M -g -w -O2 stdafx.cpp | sed s/\\.o/.d/ > stdafx.d g++ -M -g -w -O2 tandem.cpp > tandem.d g++ -M -g -w -O2 tandem.cpp | sed s/\\.o/.d/ > tandem.d g++ -M -g -w -O2 xmlparameter.cpp > xmlparameter.d g++ -M -g -w -O2 xmlparameter.cpp | sed s/\\.o/.d/ > xmlparameter.d g++ -M -g -w -O2 xmltaxonomy.cpp > xmltaxonomy.d g++ -M -g -w -O2 xmltaxonomy.cpp | sed s/\\.o/.d/ > xmltaxonomy.d g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o MSNumpress.o MSNumpress.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o base64.o base64.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadmspectrum.o loadmspectrum.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o masscalc.o masscalc.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mbiomlreport.o mbiomlreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpam.o mpam.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mplugin.o mplugin.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpmods.o mpmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mprocess.o mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mrefine.o mrefine.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mreport.o mreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore.o mscore.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore_tandem.o mscore_tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequencecollection.o msequencecollection.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequenceserver.o msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequtilities.o msequtilities.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mspectrumcondition.o mspectrumcondition.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mtermmods.o mtermmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mxxcleavage.o mxxcleavage.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mzid_report.o mzid_report.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3.o p3.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3mprocess.o p3mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3msequenceserver.o p3msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxbiomlhandler.o saxbiomlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxgamlhandler.o saxgamlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxhandler.o saxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmodhandler.o saxmodhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzdatahandler.o saxmzdatahandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzmlhandler.o saxmzmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzxmlhandler.o saxmzxmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxsaphandler.o saxsaphandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtandeminputhandler.o saxtandeminputhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtaxhandler.o saxtaxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdafx.o stdafx.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tandem.o tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmlparameter.o xmlparameter.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmltaxonomy.o xmltaxonomy.cpp g++ -g -w -O2 -o ../bin/tandem MSNumpress.o base64.o loadmspectrum.o masscalc.o mbiomlreport.o mpam.o mplugin.o mpmods.o mprocess.o mrefine.o mreport.o mscore.o mscore_tandem.o msequencecollection.o msequenceserver.o msequtilities.o mspectrumcondition.o mtermmods.o mxxcleavage.o mzid_report.o p3.o p3mprocess.o p3msequenceserver.o saxbiomlhandler.o saxgamlhandler.o saxhandler.o saxmodhandler.o saxmzdatahandler.o saxmzmlhandler.o saxmzxmlhandler.o saxsaphandler.o saxtandeminputhandler.o saxtaxhandler.o stdafx.o tandem.o xmlparameter.o xmltaxonomy.o -lpthread -L/usr/lib -lm -lexpat make[1]: Leaving directory '/build/reproducible-path/tandem-mass-201702011/src' touch build-stamp dh_testdir dh_testroot dh_installchangelogs dh_installchangelogs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/doc/tandem-mass install -p -m0644 debian/.debhelper/generated/tandem-mass/dh_installchangelogs.dch.trimmed debian/tandem-mass/usr/share/doc/tandem-mass/changelog.Debian dh_installdocs dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -p -m0644 debian/copyright debian/tandem-mass/usr/share/doc/tandem-mass/copyright dh_installexamples dh_installexamples: warning: Compatibility levels before 10 are deprecated (level 9 in use) dh_install dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/bin cp --reflink=auto -a ./bin/tandem debian/tandem-mass/usr/bin/ dh_installman dh_installman: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/man/man1/ install -p -m0644 ./debian/tandem.1 debian/tandem-mass/usr/share/man/man1/tandem.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 mv debian/tandem-mass/usr/share/man/man1/tandem.1.dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 chmod 0644 -- debian/tandem-mass/usr/share/man/man1/tandem.1 dh_lintian dh_lintian: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/lintian/overrides install -p -m0644 debian/tandem-mass.lintian-overrides debian/tandem-mass/usr/share/lintian/overrides/tandem-mass dh_strip -a dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad objcopy --only-keep-debug --compress-debug-sections debian/tandem-mass/usr/bin/tandem debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug strip --remove-section=.comment --remove-section=.note debian/tandem-mass/usr/bin/tandem objcopy --add-gnu-debuglink debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug debian/tandem-mass/usr/bin/tandem install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc ln -s tandem-mass debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc/tandem-mass-dbgsym install -m0755 -d debian/.debhelper/tandem-mass dh_compress dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/tandem-mass chmod a-x usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 gzip -9nf usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 cd '/build/reproducible-path/tandem-mass-201702011' dh_fixperms find debian/tandem-mass ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tandem-mass/usr/share/doc -type f -a -true -a ! -regex 'debian/tandem-mass/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tandem-mass/usr/share/man debian/tandem-mass/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_installdeb dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN dh_shlibdeps dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN dpkg-shlibdeps -Tdebian/tandem-mass.substvars debian/tandem-mass/usr/bin/tandem dh_gencontrol dh_gencontrol: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN echo misc:Depends= >> debian/tandem-mass.substvars echo misc:Pre-Depends= >> debian/tandem-mass.substvars install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -cdebian/control -Pdebian/.debhelper/tandem-mass/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=tandem-mass-dbgsym "-DDepends=tandem-mass (= \${binary:Version})" "-DDescription=debug symbols for tandem-mass" -DBuild-Ids=ad24df061b3d9ec26144478c94e7afff6061cf8b -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -cdebian/control -Pdebian/tandem-mass chmod 0644 -- debian/tandem-mass/DEBIAN/control dh_md5sums install -m0755 -d debian/tandem-mass/DEBIAN cd debian/tandem-mass >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tandem-mass/DEBIAN/md5sums install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN cd debian/.debhelper/tandem-mass/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/tandem-mass .. dpkg-deb --root-owner-group --build debian/.debhelper/tandem-mass/dbgsym-root .. dpkg-deb: building package 'tandem-mass' in '../tandem-mass_201702011-1_arm64.deb'. dpkg-deb: building package 'tandem-mass-dbgsym' in '../tandem-mass-dbgsym_201702011-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../tandem-mass_201702011-1_arm64.buildinfo dpkg-genchanges --build=binary -O../tandem-mass_201702011-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/781175 and its subdirectories I: Current time: Thu Jul 31 00:21:10 -12 2025 I: pbuilder-time-stamp: 1753964470 Thu Jul 31 12:21:14 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Thu Jul 31 12:21:14 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Thu Jul 31 12:21:14 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Thu Jul 31 12:21:14 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-vPu1ml' ==================================================================================== Wed Sep 2 18:44:15 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "2 tandem-mass trixie /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa 1:201702011-1" as arguments. Wed Sep 2 18:44:15 UTC 2026 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-NAMWcTvq" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Sep 2 18:44:15 UTC 2026 I: Downloading source for trixie/tandem-mass=1:201702011-1 Reading package lists... NOTICE: 'tandem-mass' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/tandem-mass.git Please use: git clone https://salsa.debian.org/debichem-team/tandem-mass.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2682 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (dsc) [2031 B] Get:2 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (tar) [2666 kB] Get:3 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (diff) [13.9 kB] Fetched 2682 kB in 0s (58.4 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'tandem-mass' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/tandem-mass.git Please use: git clone https://salsa.debian.org/debichem-team/tandem-mass.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2682 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (dsc) [2031 B] Get:2 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (tar) [2666 kB] Get:3 http://deb.debian.org/debian trixie/main tandem-mass 1:201702011-1 (diff) [13.9 kB] Fetched 2682 kB in 0s (58.4 MB/s) Download complete and in download only mode ============================================================================= Re-Building tandem-mass in trixie on arm64 on codethink03-arm64 now. Date: Wed Sep 2 19:44:15 BST 2026 Date UTC: Wed Sep 2 18:44:15 UTC 2026 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_Wpa2 + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' tandem-mass = debian-installer -o tandem-mass = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' tandem-mass = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_Wpa2 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2 --logfile b2/build.log tandem-mass_201702011-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Sep 3 08:44:16 +14 2026 I: pbuilder-time-stamp: 1788374656 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [tandem-mass_201702011-1.dsc] I: copying [./tandem-mass_201702011.orig.tar.gz] I: copying [./tandem-mass_201702011-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./tandem-mass_201702011-1.dsc: no acceptable signature found dpkg-source: info: extracting tandem-mass in tandem-mass-201702011 dpkg-source: info: unpacking tandem-mass_201702011.orig.tar.gz dpkg-source: info: unpacking tandem-mass_201702011-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian-makefile dpkg-source: info: applying fix-missing-include-string-h dpkg-source: info: applying nullptr-fixes I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Sep 2 18:44 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=a94d9b0f2c814d95a5c931f9c4f95632 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=880301 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_Wpa2 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2 --logfile b2/build.log tandem-mass_201702011-1.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 9.20151219), dpkg-dev (>= 1.16.1~), libexpat1-dev (>= 2.0.1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 9.20151219); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev (>= 2.0.1); however: Package libexpat1-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 11.2 MB of archives. After unpacking 45.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-4 [862 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-4 [539 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-2.1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.2 [919 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.7.1-2 [145 kB] Fetched 11.2 MB in 0s (73.1 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../00-libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.23.1-2_arm64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.41-5_arm64.deb ... Unpacking bsdextrautils (2.41-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../24-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-2.1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../30-libexpat1-dev_2.7.1-2_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.7.1-2) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41-5) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libexpat1-dev:arm64 (2.7.1-2) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.1-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/880301/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/880301/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/tandem-mass-201702011/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../tandem-mass_201702011-1_source.changes dpkg-buildpackage: info: source package tandem-mass dpkg-buildpackage: info: source version 1:201702011-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh_testdir dh_testroot dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ dh_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use) rm -f -- debian/tandem-mass.substvars debian/files rm -fr -- debian/tandem-mass/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) rm -f bin/tandem rm -f src/*.d src/*.o rm -f build-stamp debian/rules binary dh_testdir dh_prep rm -f -- debian/tandem-mass.substvars rm -fr -- debian/.debhelper/generated/tandem-mass/ debian/tandem-mass/ debian/tmp/ dh_auto_build --sourcedirectory=src --buildsystem=makefile -- -f Makefile_ubuntu dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd src && make -j1 -f Makefile_ubuntu make[1]: Entering directory '/build/reproducible-path/tandem-mass-201702011/src' g++ -M -g -w -O2 MSNumpress.cpp > MSNumpress.d g++ -M -g -w -O2 MSNumpress.cpp | sed s/\\.o/.d/ > MSNumpress.d g++ -M -g -w -O2 base64.cpp > base64.d g++ -M -g -w -O2 base64.cpp | sed s/\\.o/.d/ > base64.d g++ -M -g -w -O2 loadmspectrum.cpp > loadmspectrum.d g++ -M -g -w -O2 loadmspectrum.cpp | sed s/\\.o/.d/ > loadmspectrum.d g++ -M -g -w -O2 masscalc.cpp > masscalc.d g++ -M -g -w -O2 masscalc.cpp | sed s/\\.o/.d/ > masscalc.d g++ -M -g -w -O2 mbiomlreport.cpp > mbiomlreport.d g++ -M -g -w -O2 mbiomlreport.cpp | sed s/\\.o/.d/ > mbiomlreport.d g++ -M -g -w -O2 mpam.cpp > mpam.d g++ -M -g -w -O2 mpam.cpp | sed s/\\.o/.d/ > mpam.d g++ -M -g -w -O2 mplugin.cpp > mplugin.d g++ -M -g -w -O2 mplugin.cpp | sed s/\\.o/.d/ > mplugin.d g++ -M -g -w -O2 mpmods.cpp > mpmods.d g++ -M -g -w -O2 mpmods.cpp | sed s/\\.o/.d/ > mpmods.d g++ -M -g -w -O2 mprocess.cpp > mprocess.d g++ -M -g -w -O2 mprocess.cpp | sed s/\\.o/.d/ > mprocess.d g++ -M -g -w -O2 mrefine.cpp > mrefine.d g++ -M -g -w -O2 mrefine.cpp | sed s/\\.o/.d/ > mrefine.d g++ -M -g -w -O2 mreport.cpp > mreport.d g++ -M -g -w -O2 mreport.cpp | sed s/\\.o/.d/ > mreport.d g++ -M -g -w -O2 mscore.cpp > mscore.d g++ -M -g -w -O2 mscore.cpp | sed s/\\.o/.d/ > mscore.d g++ -M -g -w -O2 mscore_tandem.cpp > mscore_tandem.d g++ -M -g -w -O2 mscore_tandem.cpp | sed s/\\.o/.d/ > mscore_tandem.d g++ -M -g -w -O2 msequencecollection.cpp > msequencecollection.d g++ -M -g -w -O2 msequencecollection.cpp | sed s/\\.o/.d/ > msequencecollection.d g++ -M -g -w -O2 msequenceserver.cpp > msequenceserver.d g++ -M -g -w -O2 msequenceserver.cpp | sed s/\\.o/.d/ > msequenceserver.d g++ -M -g -w -O2 msequtilities.cpp > msequtilities.d g++ -M -g -w -O2 msequtilities.cpp | sed s/\\.o/.d/ > msequtilities.d g++ -M -g -w -O2 mspectrumcondition.cpp > mspectrumcondition.d g++ -M -g -w -O2 mspectrumcondition.cpp | sed s/\\.o/.d/ > mspectrumcondition.d g++ -M -g -w -O2 mtermmods.cpp > mtermmods.d g++ -M -g -w -O2 mtermmods.cpp | sed s/\\.o/.d/ > mtermmods.d g++ -M -g -w -O2 mxxcleavage.cpp > mxxcleavage.d g++ -M -g -w -O2 mxxcleavage.cpp | sed s/\\.o/.d/ > mxxcleavage.d g++ -M -g -w -O2 mzid_report.cpp > mzid_report.d g++ -M -g -w -O2 mzid_report.cpp | sed s/\\.o/.d/ > mzid_report.d g++ -M -g -w -O2 p3.cpp > p3.d g++ -M -g -w -O2 p3.cpp | sed s/\\.o/.d/ > p3.d g++ -M -g -w -O2 p3mprocess.cpp > p3mprocess.d g++ -M -g -w -O2 p3mprocess.cpp | sed s/\\.o/.d/ > p3mprocess.d g++ -M -g -w -O2 p3msequenceserver.cpp > p3msequenceserver.d g++ -M -g -w -O2 p3msequenceserver.cpp | sed s/\\.o/.d/ > p3msequenceserver.d g++ -M -g -w -O2 saxbiomlhandler.cpp > saxbiomlhandler.d g++ -M -g -w -O2 saxbiomlhandler.cpp | sed s/\\.o/.d/ > saxbiomlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp > saxgamlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp | sed s/\\.o/.d/ > saxgamlhandler.d g++ -M -g -w -O2 saxhandler.cpp > saxhandler.d g++ -M -g -w -O2 saxhandler.cpp | sed s/\\.o/.d/ > saxhandler.d g++ -M -g -w -O2 saxmodhandler.cpp > saxmodhandler.d g++ -M -g -w -O2 saxmodhandler.cpp | sed s/\\.o/.d/ > saxmodhandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp > saxmzdatahandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp | sed s/\\.o/.d/ > saxmzdatahandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp > saxmzmlhandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp | sed s/\\.o/.d/ > saxmzmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp > saxmzxmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp | sed s/\\.o/.d/ > saxmzxmlhandler.d g++ -M -g -w -O2 saxsaphandler.cpp > saxsaphandler.d g++ -M -g -w -O2 saxsaphandler.cpp | sed s/\\.o/.d/ > saxsaphandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp > saxtandeminputhandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp | sed s/\\.o/.d/ > saxtandeminputhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp > saxtaxhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp | sed s/\\.o/.d/ > saxtaxhandler.d g++ -M -g -w -O2 stdafx.cpp > stdafx.d g++ -M -g -w -O2 stdafx.cpp | sed s/\\.o/.d/ > stdafx.d g++ -M -g -w -O2 tandem.cpp > tandem.d g++ -M -g -w -O2 tandem.cpp | sed s/\\.o/.d/ > tandem.d g++ -M -g -w -O2 xmlparameter.cpp > xmlparameter.d g++ -M -g -w -O2 xmlparameter.cpp | sed s/\\.o/.d/ > xmlparameter.d g++ -M -g -w -O2 xmltaxonomy.cpp > xmltaxonomy.d g++ -M -g -w -O2 xmltaxonomy.cpp | sed s/\\.o/.d/ > xmltaxonomy.d g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o MSNumpress.o MSNumpress.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o base64.o base64.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadmspectrum.o loadmspectrum.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o masscalc.o masscalc.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mbiomlreport.o mbiomlreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpam.o mpam.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mplugin.o mplugin.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpmods.o mpmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mprocess.o mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mrefine.o mrefine.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mreport.o mreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore.o mscore.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore_tandem.o mscore_tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequencecollection.o msequencecollection.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequenceserver.o msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequtilities.o msequtilities.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mspectrumcondition.o mspectrumcondition.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mtermmods.o mtermmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mxxcleavage.o mxxcleavage.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mzid_report.o mzid_report.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3.o p3.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3mprocess.o p3mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3msequenceserver.o p3msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxbiomlhandler.o saxbiomlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxgamlhandler.o saxgamlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxhandler.o saxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmodhandler.o saxmodhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzdatahandler.o saxmzdatahandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzmlhandler.o saxmzmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzxmlhandler.o saxmzxmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxsaphandler.o saxsaphandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtandeminputhandler.o saxtandeminputhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtaxhandler.o saxtaxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdafx.o stdafx.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tandem.o tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmlparameter.o xmlparameter.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmltaxonomy.o xmltaxonomy.cpp g++ -g -w -O2 -o ../bin/tandem MSNumpress.o base64.o loadmspectrum.o masscalc.o mbiomlreport.o mpam.o mplugin.o mpmods.o mprocess.o mrefine.o mreport.o mscore.o mscore_tandem.o msequencecollection.o msequenceserver.o msequtilities.o mspectrumcondition.o mtermmods.o mxxcleavage.o mzid_report.o p3.o p3mprocess.o p3msequenceserver.o saxbiomlhandler.o saxgamlhandler.o saxhandler.o saxmodhandler.o saxmzdatahandler.o saxmzmlhandler.o saxmzxmlhandler.o saxsaphandler.o saxtandeminputhandler.o saxtaxhandler.o stdafx.o tandem.o xmlparameter.o xmltaxonomy.o -lpthread -L/usr/lib -lm -lexpat make[1]: Leaving directory '/build/reproducible-path/tandem-mass-201702011/src' touch build-stamp dh_testdir dh_testroot dh_installchangelogs dh_installchangelogs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/doc/tandem-mass install -p -m0644 debian/.debhelper/generated/tandem-mass/dh_installchangelogs.dch.trimmed debian/tandem-mass/usr/share/doc/tandem-mass/changelog.Debian dh_installdocs dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -p -m0644 debian/copyright debian/tandem-mass/usr/share/doc/tandem-mass/copyright dh_installexamples dh_installexamples: warning: Compatibility levels before 10 are deprecated (level 9 in use) dh_install dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/bin cp --reflink=auto -a ./bin/tandem debian/tandem-mass/usr/bin/ dh_installman dh_installman: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/man/man1/ install -p -m0644 ./debian/tandem.1 debian/tandem-mass/usr/share/man/man1/tandem.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 mv debian/tandem-mass/usr/share/man/man1/tandem.1.dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 chmod 0644 -- debian/tandem-mass/usr/share/man/man1/tandem.1 dh_lintian dh_lintian: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/usr/share/lintian/overrides install -p -m0644 debian/tandem-mass.lintian-overrides debian/tandem-mass/usr/share/lintian/overrides/tandem-mass dh_strip -a dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad objcopy --only-keep-debug --compress-debug-sections debian/tandem-mass/usr/bin/tandem debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug strip --remove-section=.comment --remove-section=.note debian/tandem-mass/usr/bin/tandem objcopy --add-gnu-debuglink debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/ad/24df061b3d9ec26144478c94e7afff6061cf8b.debug debian/tandem-mass/usr/bin/tandem install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc ln -s tandem-mass debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc/tandem-mass-dbgsym install -m0755 -d debian/.debhelper/tandem-mass dh_compress dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use) cd debian/tandem-mass chmod a-x usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 gzip -9nf usr/share/doc/tandem-mass/changelog.Debian usr/share/man/man1/tandem.1 cd '/build/reproducible-path/tandem-mass-201702011' dh_fixperms find debian/tandem-mass ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tandem-mass/usr/share/doc -type f -a -true -a ! -regex 'debian/tandem-mass/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tandem-mass/usr/share/man debian/tandem-mass/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_installdeb dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN dh_shlibdeps dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN dpkg-shlibdeps -Tdebian/tandem-mass.substvars debian/tandem-mass/usr/bin/tandem dh_gencontrol dh_gencontrol: warning: Compatibility levels before 10 are deprecated (level 9 in use) install -m0755 -d debian/tandem-mass/DEBIAN echo misc:Depends= >> debian/tandem-mass.substvars echo misc:Pre-Depends= >> debian/tandem-mass.substvars install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -cdebian/control -Pdebian/.debhelper/tandem-mass/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=tandem-mass-dbgsym "-DDepends=tandem-mass (= \${binary:Version})" "-DDescription=debug symbols for tandem-mass" -DBuild-Ids=ad24df061b3d9ec26144478c94e7afff6061cf8b -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -cdebian/control -Pdebian/tandem-mass chmod 0644 -- debian/tandem-mass/DEBIAN/control dh_md5sums install -m0755 -d debian/tandem-mass/DEBIAN cd debian/tandem-mass >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tandem-mass/DEBIAN/md5sums install -m0755 -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN cd debian/.debhelper/tandem-mass/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/tandem-mass .. dpkg-deb --root-owner-group --build debian/.debhelper/tandem-mass/dbgsym-root .. dpkg-deb: building package 'tandem-mass' in '../tandem-mass_201702011-1_arm64.deb'. dpkg-deb: building package 'tandem-mass-dbgsym' in '../tandem-mass-dbgsym_201702011-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../tandem-mass_201702011-1_arm64.buildinfo dpkg-genchanges --build=binary -O../tandem-mass_201702011-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/880301/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/880301/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/880301 and its subdirectories I: Current time: Thu Sep 3 08:46:01 +14 2026 + false + set +x I: pbuilder-time-stamp: 1788374762 Wed Sep 2 18:46:02 UTC 2026 I: Signing ./b2/tandem-mass_201702011-1_arm64.buildinfo as tandem-mass_201702011-1_arm64.buildinfo.asc Wed Sep 2 18:46:02 UTC 2026 I: Signed ./b2/tandem-mass_201702011-1_arm64.buildinfo as ./b2/tandem-mass_201702011-1_arm64.buildinfo.asc Wed Sep 2 18:46:02 UTC 2026 - build #2 for tandem-mass/trixie/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Wed Sep 2 18:46:02 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-NAMWcTvq, removing. /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa: total 48 drwxr-xr-x 2 jenkins jenkins 4096 Jul 31 12:21 b1 drwxr-xr-x 2 jenkins jenkins 4096 Jul 31 12:23 b2 -rw------- 1 jenkins jenkins 36669 Jul 31 12:21 rbuildlog.iaq0mRG -rw-r--r-- 1 jenkins jenkins 2031 Nov 18 2018 tandem-mass_201702011-1.dsc /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1: total 7088 -rw-r--r-- 1 jenkins jenkins 33180 Jul 31 12:21 build.log -rw-r--r-- 1 jenkins jenkins 4295124 Jul 31 12:21 tandem-mass-dbgsym_201702011-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 13900 Jul 31 12:21 tandem-mass_201702011-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2031 Jul 31 12:21 tandem-mass_201702011-1.dsc -rw-r--r-- 1 jenkins jenkins 4972 Jul 31 12:21 tandem-mass_201702011-1_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5854 Jul 31 12:21 tandem-mass_201702011-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1562 Jul 31 12:21 tandem-mass_201702011-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 189080 Jul 31 12:21 tandem-mass_201702011-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 1690 Jul 31 12:21 tandem-mass_201702011-1_source.changes -rw-r--r-- 1 jenkins jenkins 2665884 Jul 31 12:21 tandem-mass_201702011.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2: total 7068 -rw-r--r-- 1 jenkins jenkins 35117 Jul 31 12:23 build.log -rw-r--r-- 1 jenkins jenkins 4295124 Jul 31 12:23 tandem-mass-dbgsym_201702011-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 13900 Jul 31 12:23 tandem-mass_201702011-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2031 Jul 31 12:23 tandem-mass_201702011-1.dsc -rw-r--r-- 1 jenkins jenkins 4972 Jul 31 12:23 tandem-mass_201702011-1_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5854 Jul 31 12:23 tandem-mass_201702011-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1562 Jul 31 12:23 tandem-mass_201702011-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 189080 Jul 31 12:23 tandem-mass_201702011-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 1690 Jul 31 12:23 tandem-mass_201702011-1_source.changes -rw-r--r-- 1 jenkins jenkins 2665884 Jul 31 12:23 tandem-mass_201702011.orig.tar.gz Thu Jul 31 12:23:07 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Thu Jul 31 12:23:07 UTC 2025 I: tandem-mass_201702011-1_arm64.changes: Format: 1.8 Date: Sun, 18 Nov 2018 09:00:11 +0100 Source: tandem-mass Binary: tandem-mass tandem-mass-dbgsym Architecture: arm64 Version: 1:201702011-1 Distribution: unstable Urgency: low Maintainer: The Debichem Group Changed-By: Filippo Rusconi Description: tandem-mass - mass spectrometry software for protein identification Changes: tandem-mass (1:201702011-1) unstable; urgency=low . * Exactly same package as the previous one that could not be uploaded because the package version number was not greater than the former NMU one (of version 1:20170201-0.1). Checksums-Sha1: b31032cceeb2444472d9bd606e509193eb41f6da 4295124 tandem-mass-dbgsym_201702011-1_arm64.deb cdffd0ab986ee452fa729dd37820a9d237239823 4972 tandem-mass_201702011-1_arm64.buildinfo 9a3e1c5c1e1f18101d5bead7ab62ea721deb848d 189080 tandem-mass_201702011-1_arm64.deb Checksums-Sha256: b0345b969bb2ca6a40db8828e7c19c692b355b6a33f12ddb71cde70e6c894e8f 4295124 tandem-mass-dbgsym_201702011-1_arm64.deb 0894ede96c910f248365c6a5f0b90f4f4993920871f3c4c0eec51df4b71f18a3 4972 tandem-mass_201702011-1_arm64.buildinfo 976aeab501b2a0fe49750821eec289d2b4de6f588bb46c8842601f7798e9ec18 189080 tandem-mass_201702011-1_arm64.deb Files: 4c676fee9cae46d56ace5ab0fd77afb7 4295124 debug optional tandem-mass-dbgsym_201702011-1_arm64.deb 3ca4df285c56776bb4851fd90a03d307 4972 science optional tandem-mass_201702011-1_arm64.buildinfo 5cd60f4552f404708f999ef3bd625e8e 189080 science optional tandem-mass_201702011-1_arm64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/tandem-mass_201702011-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/tandem-mass_201702011-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/tandem-mass_201702011-1.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/tandem-mass_201702011-1.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/arm64/tandem-mass_201702011-1_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/tandem-mass_201702011-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-07-31 12:21:11.215878937 +0000 +++ b2/build.log 2025-07-31 12:23:02.988029616 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jul 31 00:19:28 -12 2025 -I: pbuilder-time-stamp: 1753964368 +I: Current time: Thu Sep 3 08:44:16 +14 2026 +I: pbuilder-time-stamp: 1788374656 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: applying nullptr-fixes I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/781175/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 2 18:44 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='c3d9a1c439a843abbfdd62e0dab5c8dd' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='781175' - PS1='# ' - PS2='> ' + INVOCATION_ID=a94d9b0f2c814d95a5c931f9c4f95632 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=880301 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_YKOa --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1 --logfile b1/build.log tandem-mass_201702011-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/pbuilderrc_Wpa2 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2 --logfile b2/build.log tandem-mass_201702011-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/781175/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -140,7 +172,7 @@ Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.2 [919 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.7.1-2 [145 kB] -Fetched 11.2 MB in 0s (74.6 MB/s) +Fetched 11.2 MB in 0s (73.1 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) @@ -284,7 +316,11 @@ fakeroot is already the newest version (1.37.1.1-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/tandem-mass-201702011/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../tandem-mass_201702011-1_source.changes +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/tandem-mass-201702011/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../tandem-mass_201702011-1_source.changes dpkg-buildpackage: info: source package tandem-mass dpkg-buildpackage: info: source version 1:201702011-1 dpkg-buildpackage: info: source distribution unstable @@ -519,12 +555,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/880301/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/781175 and its subdirectories -I: Current time: Thu Jul 31 00:21:10 -12 2025 -I: pbuilder-time-stamp: 1753964470 +I: removing directory /srv/workspace/pbuilder/880301 and its subdirectories +I: Current time: Thu Sep 3 08:46:01 +14 2026 +I: pbuilder-time-stamp: 1788374762 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/tandem-mass_201702011-1.diff: 66.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/tandem-mass_201702011-1.diff.gz b2/build.log: 78.0% -- replaced with stdout Compressing the 1st log... b1/build.log: 78.7% -- replaced with stdout Thu Jul 31 12:23:08 UTC 2025 I: diffoscope 302 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_tandem-mass_trixie_arm64_1753964588 + touch /var/log/reproducible-builds/diffoscope_stamp_tandem-mass_trixie_arm64_1753964588 + RESULT=0 + systemd-run '--description=diffoscope on tandem-mass/1:201702011-1 in trixie/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_12-112327 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa --run-session -c jenkins-reproducible-trixie-diffoscope-4b00843b-85c2-495a-afa0-3ab96b92b962 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/dbd-tmp-QS1L7xm ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/tandem-mass_201702011-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/tandem-mass_201702011-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/tandem-mass_201702011-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1/tandem-mass_201702011-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2/tandem-mass_201702011-1_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_12-112327.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/tandem-mass_201702011-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/tandem-mass_201702011-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/tandem-mass_201702011-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b1/tandem-mass_201702011-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.lVIsiZqa/b2/tandem-mass_201702011-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 160ms CPU time consumed: 161ms _ _ | |_ __ _ _ __ __| | ___ _ __ ___ _ __ ___ __ _ ___ ___ | __/ _` | '_ \ / _` |/ _ \ '_ ` _ \ _____| '_ ` _ \ / _` / __/ __| | || (_| | | | | (_| | __/ | | | | |_____| | | | | | (_| \__ \__ \ \__\__,_|_| |_|\__,_|\___|_| |_| |_| |_| |_| |_|\__,_|___/___/ Thu Jul 31 12:23:08 UTC 2025 I: diffoscope 302 found no differences in the changes files, and a .buildinfo file also exists. Thu Jul 31 12:23:08 UTC 2025 I: tandem-mass from trixie built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-07-31 12:23:09] INFO: Starting at 2025-07-31 12:23:09.197760 [2025-07-31 12:23:09] INFO: Generating the pages of 1 package(s) [2025-07-31 12:23:09] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/arm64/tandem-mass didn't produce a buildlog, even though it has been built. [2025-07-31 12:23:09] INFO: Finished at 2025-07-31 12:23:09.434649, took: 0:00:00.236892 Thu Jul 31 12:23:09 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/arm64/tandem-mass.html Thu Jul 31 12:23:09 UTC 2025 I: Removing signed tandem-mass_201702011-1_arm64.buildinfo.asc files: removed './b1/tandem-mass_201702011-1_arm64.buildinfo.asc' removed './b2/tandem-mass_201702011-1_arm64.buildinfo.asc' 1753964589 arm64 trixie tandem-mass Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/tandem-mass_201702011-1.rbuild.log: 75.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/tandem-mass_201702011-1.rbuild.log.gz [2025-07-31 12:23:09] INFO: Starting at 2025-07-31 12:23:09.692821 [2025-07-31 12:23:09] INFO: Generating the pages of 1 package(s) [2025-07-31 12:23:09] INFO: Finished at 2025-07-31 12:23:09.922173, took: 0:00:00.229355 All cleanup done. Thu Jul 31 12:23:09 UTC 2025 - total duration: 0h 3m 58s. Thu Jul 31 12:23:09 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-MS1tpPc4, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 3min 59.683s CPU time consumed: 4.648s