Running as unit: rb-build-arm64_12-92970.service ==================================================================================== Sun Apr 27 23:10:35 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_12) on jenkins, called using "codethink04-arm64 codethink03-arm64" as arguments. Sun Apr 27 23:10:35 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-smBe2eJp" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Apr 27 23:10:35 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Sun Apr 27 23:10:35 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-xn29on' Sun Apr 27 23:10:36 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Sun Apr 27 23:10:36 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-IC3DLI' ok, let's check if gffread is building anywhere yet… ok, gffread is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of gffread in unstable on arm64 on jenkins now. 1st build will be done on codethink04-arm64.debian.net. 2nd build will be done on codethink03-arm64.debian.net. ============================================================================= Sun Apr 27 23:10:58 UTC 2025 I: starting to build gffread/unstable/arm64 on jenkins on '2025-04-27 23:10' Sun Apr 27 23:10:58 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_12/92970/console.log 1745795458 arm64 unstable gffread Sun Apr 27 23:10:58 UTC 2025 I: Downloading source for unstable/gffread=0.12.7-8 --2025-04-27 23:10:58-- http://deb.debian.org/debian/pool/main/g/gffread/gffread_0.12.7-8.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2434 (2.4K) [text/prs.lines.tag] Saving to: ‘gffread_0.12.7-8.dsc’ 0K .. 100% 381M=0s 2025-04-27 23:10:58 (381 MB/s) - ‘gffread_0.12.7-8.dsc’ saved [2434/2434] --2025-04-27 23:10:58-- http://deb.debian.org/debian/pool/main/g/gffread/gffread_0.12.7-8.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2434 (2.4K) [text/prs.lines.tag] Saving to: ‘gffread_0.12.7-8.dsc’ 0K .. 100% 381M=0s 2025-04-27 23:10:58 (381 MB/s) - ‘gffread_0.12.7-8.dsc’ saved [2434/2434] Sun Apr 27 23:10:58 UTC 2025 I: gffread_0.12.7-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: gffread Binary: gffread Architecture: any Version: 0.12.7-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Michael R. Crusoe , Steffen Moeller , Étienne Mollier Homepage: https://ccb.jhu.edu/software/stringtie/gff.shtml Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/gffread Vcs-Git: https://salsa.debian.org/med-team/gffread.git Testsuite: autopkgtest Testsuite-Triggers: augustus-doc, bash, bedtools-test, cnvkit, dpkg-dev, emboss-data, emboss-test, gbrowse, genometools-common, gff2aplot, gff2ps, htslib-test, libbio-graphics-perl, optimir, proteinortho, python3-gffutils, python3-pybedtools, r-bioc-genomicfeatures, r-bioc-gviz, r-bioc-rhtslib, r-bioc-rtracklayer, seqan-apps, spades, trinityrnaseq-examples Build-Depends: debhelper-compat (= 13), libgclib-dev Package-List: gffread deb science optional arch=any Checksums-Sha1: 2d8d3e6e0e2fba6d9c4df6d194280f46b31072d1 403734 gffread_0.12.7.orig.tar.gz 011e282c68da0c3bdcc5df2fa2d5a46dce8de163 9176 gffread_0.12.7-8.debian.tar.xz Checksums-Sha256: 6f3417090b3beb74f435bf5d462c87475b3c704a8a0d71821f6c1321c47dbbbe 403734 gffread_0.12.7.orig.tar.gz 1b9f40f1cd7f630d6fe09529ddebf7fc4aab51424e6e94cdc6f6539dba3d92f6 9176 gffread_0.12.7-8.debian.tar.xz Files: e7b6121f75bf707b487af8850fe3d47c 403734 gffread_0.12.7.orig.tar.gz 4fe0052739c644750de61707b1932d4c 9176 gffread_0.12.7-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmaqGLAACgkQPCZ2P2xn 5uL/ZhAApLOfwAhD6PBVJRMdd6q71dQNAcjB3H9vSUs90qTG9jibOyR2eRmKWLHc MvrMwXSpcnXHNw8+EdX9WzRTMm0kiRTpGCX9vl7JjCNfyrvZmH7pBiTc6gonOTfD ZoLgRsRAJ4rA1YQ1xrF4arl5jp37BcnMPQIT7/mdEDZToQf6HGHjlAdt23wpxdeX MxEyCwJ0pNpU6K96FPD43OXGqu0VhGUTimlA1eAQc8Qo28maodbPIoW8r90Qgi1d Pues081LWoer/m/JIexGwpqyq6C9KyzeVVXfilCzVoP2bklG62X+411GyIFxVT3i lFCjmEBvXa/xCejgubgK+lVH2T6RP9RnVDv2CZsvX2uXXy/awRSbs4oYKC4kMv7p Vq1yG6gTzkHVfbbSTICjP9GRVAFxV1I+Y23O+k4vJhzgbaqiJsZPUSUpIUgJEV0U /c/v7HBiU0KvvuCs838ZqeVHthuTkIYcpQdngkkID88ecHjKhT0QcKzahKbRuJ5t oYb/1xigB06KEna3woL7+LxQR+ONIJHFiMR8yjgnZCYj9i3otLqKifgglUsmvvoc 6vQdnuHj11Rp6ZPIXkk5SNZ27GX8HKFKf0BN1VvVM5v9X1lCX7XJNue+Zy03r2qs e/+ttgWF288Xnd6EHEaIdiLALoyJL5oHH2BNX2FZ1H216UNg5rE= =BxQg -----END PGP SIGNATURE----- Sun Apr 27 23:10:58 UTC 2025 I: Checking whether the package is not for us Sun Apr 27 23:10:58 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Sun Apr 27 23:10:58 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Sun Apr 27 23:10:58 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Sun Apr 27 23:10:58 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-JiTemg' ==================================================================================== Sun Apr 27 23:10:59 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink04-arm64, called using "1 gffread unstable /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV 0.12.7-8" as arguments. Sun Apr 27 23:10:59 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-3xJbE4Uf" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Apr 27 23:11:00 UTC 2025 I: Downloading source for unstable/gffread=0.12.7-8 Reading package lists... NOTICE: 'gffread' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gffread.git Please use: git clone https://salsa.debian.org/med-team/gffread.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 415 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (tar) [404 kB] Get:3 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (diff) [9176 B] Fetched 415 kB in 1s (407 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'gffread' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gffread.git Please use: git clone https://salsa.debian.org/med-team/gffread.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 415 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (tar) [404 kB] Get:3 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (diff) [9176 B] Fetched 415 kB in 1s (407 kB/s) Download complete and in download only mode ============================================================================= Building gffread in unstable on arm64 on codethink04-arm64 now. Date: Mon Apr 28 00:11:01 BST 2025 Date UTC: Sun Apr 27 23:11:01 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 27 11:11:01 -12 2025 I: pbuilder-time-stamp: 1745795461 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gffread_0.12.7-8.dsc] I: copying [./gffread_0.12.7.orig.tar.gz] I: copying [./gffread_0.12.7-8.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./gffread_0.12.7-8.dsc: unsupported subcommand dpkg-source: info: extracting gffread in gffread-0.12.7 dpkg-source: info: unpacking gffread_0.12.7.orig.tar.gz dpkg-source: info: unpacking gffread_0.12.7-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying gclib.patch dpkg-source: info: applying hardening I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/911484/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='6d7e4b6a80ef462e9af85ffd1c7f4fdf' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='911484' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_kwx7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1 --logfile b1/build.log gffread_0.12.7-8.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-33-cloud-arm64 #1 SMP Debian 6.1.133-1 (2025-04-10) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/911484/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgclib-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19953 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgclib-dev; however: Package libgclib-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgclib-dev{a} libgclib3{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 11.3 MB of archives. After unpacking 46.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-4 [93.9 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.4 [629 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libgclib3 arm64 0.12.7+ds-6 [134 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libgclib-dev arm64 0.12.7+ds-6 [270 kB] Fetched 11.3 MB in 0s (35.9 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19953 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2_arm64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_arm64.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../21-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../23-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libgclib3:arm64. Preparing to unpack .../29-libgclib3_0.12.7+ds-6_arm64.deb ... Unpacking libgclib3:arm64 (0.12.7+ds-6) ... Selecting previously unselected package libgclib-dev:arm64. Preparing to unpack .../30-libgclib-dev_0.12.7+ds-6_arm64.deb ... Unpacking libgclib-dev:arm64 (0.12.7+ds-6) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up libgclib3:arm64 (0.12.7+ds-6) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libgclib-dev:arm64 (0.12.7+ds-6) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/gffread-0.12.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gffread_0.12.7-8_source.changes dpkg-buildpackage: info: source package gffread dpkg-buildpackage: info: source version 0.12.7-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/gffread-0.12.7' make[1]: Leaving directory '/build/reproducible-path/gffread-0.12.7' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gffread-0.12.7' dh_auto_build -- 'LINKER=$(CXX)' make -j12 "INSTALL=install --strip-program=true" LINKER=\$\(CXX\) make[2]: Entering directory '/build/reproducible-path/gffread-0.12.7' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -std=c++11 -I. -I/usr/include/gclib -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-class-memaccess -g -O2 -ffile-prefix-map=/build/reproducible-path/gffread-0.12.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O0 -DDEBUG -D_DEBUG -DGDEBUG -c gffread.cpp -o gffread.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -std=c++11 -I. -I/usr/include/gclib -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-class-memaccess -g -O2 -ffile-prefix-map=/build/reproducible-path/gffread-0.12.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O0 -DDEBUG -D_DEBUG -DGDEBUG -c gff_utils.cpp -o gff_utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o gffread gffread.o gff_utils.o -lgclib -pthread make[2]: Leaving directory '/build/reproducible-path/gffread-0.12.7' make[1]: Leaving directory '/build/reproducible-path/gffread-0.12.7' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/gffread/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'gffread-dbgsym' in '../gffread-dbgsym_0.12.7-8_arm64.deb'. dpkg-deb: building package 'gffread' in '../gffread_0.12.7-8_arm64.deb'. dpkg-genbuildinfo --build=binary -O../gffread_0.12.7-8_arm64.buildinfo dpkg-genchanges --build=binary -O../gffread_0.12.7-8_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/911484 and its subdirectories I: Current time: Sun Apr 27 11:11:29 -12 2025 I: pbuilder-time-stamp: 1745795489 Sun Apr 27 23:11:29 UTC 2025 I: Signing ./b1/gffread_0.12.7-8_arm64.buildinfo as gffread_0.12.7-8_arm64.buildinfo.asc Sun Apr 27 23:11:29 UTC 2025 I: Signed ./b1/gffread_0.12.7-8_arm64.buildinfo as ./b1/gffread_0.12.7-8_arm64.buildinfo.asc Sun Apr 27 23:11:29 UTC 2025 - build #1 for gffread/unstable/arm64 on codethink04-arm64 done. Starting cleanup. All cleanup done. Sun Apr 27 23:11:29 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-3xJbE4Uf, removing. /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Apr 27 23:11 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 27 23:10 b2 -rw-r--r-- 1 jenkins jenkins 2434 Jul 31 2024 gffread_0.12.7-8.dsc -rw------- 1 jenkins jenkins 3549 Apr 27 23:10 rbuildlog.3vLPJ7T /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1: total 320 -rw-r--r-- 1 jenkins jenkins 19782 Apr 27 23:11 build.log -rw-r--r-- 1 jenkins jenkins 202972 Apr 27 23:11 gffread-dbgsym_0.12.7-8_arm64.deb -rw-r--r-- 1 jenkins jenkins 9176 Apr 27 23:11 gffread_0.12.7-8.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2434 Apr 27 23:11 gffread_0.12.7-8.dsc -rw-r--r-- 1 jenkins jenkins 4897 Apr 27 23:11 gffread_0.12.7-8_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5779 Apr 27 23:11 gffread_0.12.7-8_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1542 Apr 27 23:11 gffread_0.12.7-8_arm64.changes -rw-r--r-- 1 jenkins jenkins 57372 Apr 27 23:11 gffread_0.12.7-8_arm64.deb -rw-r--r-- 1 jenkins jenkins 1385 Apr 27 23:11 gffread_0.12.7-8_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2: total 0 Sun Apr 27 23:11:30 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 27 11:11:01 -12 2025 I: pbuilder-time-stamp: 1745795461 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gffread_0.12.7-8.dsc] I: copying [./gffread_0.12.7.orig.tar.gz] I: copying [./gffread_0.12.7-8.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./gffread_0.12.7-8.dsc: unsupported subcommand dpkg-source: info: extracting gffread in gffread-0.12.7 dpkg-source: info: unpacking gffread_0.12.7.orig.tar.gz dpkg-source: info: unpacking gffread_0.12.7-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying gclib.patch dpkg-source: info: applying hardening I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/911484/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='6d7e4b6a80ef462e9af85ffd1c7f4fdf' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='911484' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_kwx7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1 --logfile b1/build.log gffread_0.12.7-8.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-33-cloud-arm64 #1 SMP Debian 6.1.133-1 (2025-04-10) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/911484/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgclib-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19953 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgclib-dev; however: Package libgclib-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgclib-dev{a} libgclib3{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 11.3 MB of archives. After unpacking 46.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-4 [93.9 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.4 [629 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libgclib3 arm64 0.12.7+ds-6 [134 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libgclib-dev arm64 0.12.7+ds-6 [270 kB] Fetched 11.3 MB in 0s (35.9 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19953 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2_arm64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_arm64.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../21-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../23-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libgclib3:arm64. Preparing to unpack .../29-libgclib3_0.12.7+ds-6_arm64.deb ... Unpacking libgclib3:arm64 (0.12.7+ds-6) ... Selecting previously unselected package libgclib-dev:arm64. Preparing to unpack .../30-libgclib-dev_0.12.7+ds-6_arm64.deb ... Unpacking libgclib-dev:arm64 (0.12.7+ds-6) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up libgclib3:arm64 (0.12.7+ds-6) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libgclib-dev:arm64 (0.12.7+ds-6) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/gffread-0.12.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gffread_0.12.7-8_source.changes dpkg-buildpackage: info: source package gffread dpkg-buildpackage: info: source version 0.12.7-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/gffread-0.12.7' make[1]: Leaving directory '/build/reproducible-path/gffread-0.12.7' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gffread-0.12.7' dh_auto_build -- 'LINKER=$(CXX)' make -j12 "INSTALL=install --strip-program=true" LINKER=\$\(CXX\) make[2]: Entering directory '/build/reproducible-path/gffread-0.12.7' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -std=c++11 -I. -I/usr/include/gclib -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-class-memaccess -g -O2 -ffile-prefix-map=/build/reproducible-path/gffread-0.12.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O0 -DDEBUG -D_DEBUG -DGDEBUG -c gffread.cpp -o gffread.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -std=c++11 -I. -I/usr/include/gclib -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-class-memaccess -g -O2 -ffile-prefix-map=/build/reproducible-path/gffread-0.12.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O0 -DDEBUG -D_DEBUG -DGDEBUG -c gff_utils.cpp -o gff_utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o gffread gffread.o gff_utils.o -lgclib -pthread make[2]: Leaving directory '/build/reproducible-path/gffread-0.12.7' make[1]: Leaving directory '/build/reproducible-path/gffread-0.12.7' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/gffread/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'gffread-dbgsym' in '../gffread-dbgsym_0.12.7-8_arm64.deb'. dpkg-deb: building package 'gffread' in '../gffread_0.12.7-8_arm64.deb'. dpkg-genbuildinfo --build=binary -O../gffread_0.12.7-8_arm64.buildinfo dpkg-genchanges --build=binary -O../gffread_0.12.7-8_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/911484 and its subdirectories I: Current time: Sun Apr 27 11:11:29 -12 2025 I: pbuilder-time-stamp: 1745795489 Sun Apr 27 23:11:31 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sun Apr 27 23:11:31 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sun Apr 27 23:11:31 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Sun Apr 27 23:11:31 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-w5cXyM' ==================================================================================== Sun May 31 05:34:33 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "2 gffread unstable /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV 0.12.7-8" as arguments. Sun May 31 05:34:33 UTC 2026 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-5aTF90yC" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun May 31 05:34:33 UTC 2026 I: Downloading source for unstable/gffread=0.12.7-8 Reading package lists... NOTICE: 'gffread' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gffread.git Please use: git clone https://salsa.debian.org/med-team/gffread.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 415 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (tar) [404 kB] Get:3 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (diff) [9176 B] Fetched 415 kB in 0s (11.4 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'gffread' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/gffread.git Please use: git clone https://salsa.debian.org/med-team/gffread.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 415 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (tar) [404 kB] Get:3 http://deb.debian.org/debian unstable/main gffread 0.12.7-8 (diff) [9176 B] Fetched 415 kB in 0s (11.4 MB/s) Download complete and in download only mode ============================================================================= Re-Building gffread in unstable on arm64 on codethink03-arm64 now. Date: Sun May 31 06:34:33 BST 2026 Date UTC: Sun May 31 05:34:33 UTC 2026 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_JUcw + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' gffread = debian-installer -o gffread = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' gffread = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_JUcw --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2 --logfile b2/build.log gffread_0.12.7-8.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun May 31 19:34:33 +14 2026 I: pbuilder-time-stamp: 1780205673 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [gffread_0.12.7-8.dsc] I: copying [./gffread_0.12.7.orig.tar.gz] I: copying [./gffread_0.12.7-8.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./gffread_0.12.7-8.dsc: unsupported subcommand dpkg-source: info: extracting gffread in gffread-0.12.7 dpkg-source: info: unpacking gffread_0.12.7.orig.tar.gz dpkg-source: info: unpacking gffread_0.12.7-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying gclib.patch dpkg-source: info: applying hardening I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 May 31 05:34 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=66888ab3765447f68e238b1a9880f289 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2576537 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_JUcw --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2 --logfile b2/build.log gffread_0.12.7-8.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-33-cloud-arm64 #1 SMP Debian 6.1.133-1 (2025-04-10) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgclib-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19953 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgclib-dev; however: Package libgclib-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgclib-dev{a} libgclib3{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 11.3 MB of archives. After unpacking 46.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-4 [93.9 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.4 [629 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libgclib3 arm64 0.12.7+ds-6 [134 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libgclib-dev arm64 0.12.7+ds-6 [270 kB] Fetched 11.3 MB in 0s (91.2 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19953 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2_arm64.deb ... Unpacking gettext-base (0.23.1-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41-4_arm64.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-8_arm64.deb ... Unpacking m4 (1.4.19-8) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../21-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../23-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.4_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package libgclib3:arm64. Preparing to unpack .../29-libgclib3_0.12.7+ds-6_arm64.deb ... Unpacking libgclib3:arm64 (0.12.7+ds-6) ... Selecting previously unselected package libgclib-dev:arm64. Preparing to unpack .../30-libgclib-dev_0.12.7+ds-6_arm64.deb ... Unpacking libgclib-dev:arm64 (0.12.7+ds-6) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2) ... Setting up m4 (1.4.19-8) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20240727.1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up autopoint (0.23.1-2) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up libgclib3:arm64 (0.12.7+ds-6) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libgclib-dev:arm64 (0.12.7+ds-6) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.2) ... Processing triggers for libc-bin (2.41-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/gffread-0.12.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gffread_0.12.7-8_source.changes dpkg-buildpackage: info: source package gffread dpkg-buildpackage: info: source version 0.12.7-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_auto_clean make -j12 clean make[1]: Entering directory '/build/reproducible-path/gffread-0.12.7' make[1]: Leaving directory '/build/reproducible-path/gffread-0.12.7' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/gffread-0.12.7' dh_auto_build -- 'LINKER=$(CXX)' make -j12 "INSTALL=install --strip-program=true" LINKER=\$\(CXX\) make[2]: Entering directory '/build/reproducible-path/gffread-0.12.7' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -std=c++11 -I. -I/usr/include/gclib -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-class-memaccess -g -O2 -ffile-prefix-map=/build/reproducible-path/gffread-0.12.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O0 -DDEBUG -D_DEBUG -DGDEBUG -c gffread.cpp -o gffread.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -std=c++11 -I. -I/usr/include/gclib -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_REENTRANT -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-class-memaccess -g -O2 -ffile-prefix-map=/build/reproducible-path/gffread-0.12.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O0 -DDEBUG -D_DEBUG -DGDEBUG -c gff_utils.cpp -o gff_utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -o gffread gffread.o gff_utils.o -lgclib -pthread make[2]: Leaving directory '/build/reproducible-path/gffread-0.12.7' make[1]: Leaving directory '/build/reproducible-path/gffread-0.12.7' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/gffread/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'gffread' in '../gffread_0.12.7-8_arm64.deb'. dpkg-deb: building package 'gffread-dbgsym' in '../gffread-dbgsym_0.12.7-8_arm64.deb'. dpkg-genbuildinfo --build=binary -O../gffread_0.12.7-8_arm64.buildinfo dpkg-genchanges --build=binary -O../gffread_0.12.7-8_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2576537 and its subdirectories I: Current time: Sun May 31 19:35:08 +14 2026 I: pbuilder-time-stamp: 1780205708 + false + set +x Sun May 31 05:35:08 UTC 2026 I: Signing ./b2/gffread_0.12.7-8_arm64.buildinfo as gffread_0.12.7-8_arm64.buildinfo.asc Sun May 31 05:35:08 UTC 2026 I: Signed ./b2/gffread_0.12.7-8_arm64.buildinfo as ./b2/gffread_0.12.7-8_arm64.buildinfo.asc Sun May 31 05:35:08 UTC 2026 - build #2 for gffread/unstable/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Sun May 31 05:35:08 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-5aTF90yC, removing. /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV: total 36 drwxr-xr-x 2 jenkins jenkins 4096 Apr 27 23:11 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 27 23:12 b2 -rw-r--r-- 1 jenkins jenkins 2434 Jul 31 2024 gffread_0.12.7-8.dsc -rw------- 1 jenkins jenkins 23632 Apr 27 23:11 rbuildlog.3vLPJ7T /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1: total 328 -rw-r--r-- 1 jenkins jenkins 19782 Apr 27 23:11 build.log -rw-r--r-- 1 jenkins jenkins 202972 Apr 27 23:11 gffread-dbgsym_0.12.7-8_arm64.deb -rw-r--r-- 1 jenkins jenkins 9176 Apr 27 23:11 gffread_0.12.7-8.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2434 Apr 27 23:11 gffread_0.12.7-8.dsc -rw-r--r-- 1 jenkins jenkins 4897 Apr 27 23:11 gffread_0.12.7-8_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5779 Apr 27 23:11 gffread_0.12.7-8_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1542 Apr 27 23:11 gffread_0.12.7-8_arm64.changes -rw-r--r-- 1 jenkins jenkins 57372 Apr 27 23:11 gffread_0.12.7-8_arm64.deb -rw-r--r-- 1 jenkins jenkins 1385 Apr 27 23:11 gffread_0.12.7-8_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2: total 324 -rw-r--r-- 1 jenkins jenkins 21731 Apr 27 23:12 build.log -rw-r--r-- 1 jenkins jenkins 202972 Apr 27 23:12 gffread-dbgsym_0.12.7-8_arm64.deb -rw-r--r-- 1 jenkins jenkins 9176 Apr 27 23:12 gffread_0.12.7-8.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2434 Apr 27 23:12 gffread_0.12.7-8.dsc -rw-r--r-- 1 jenkins jenkins 4897 Apr 27 23:12 gffread_0.12.7-8_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5779 Apr 27 23:12 gffread_0.12.7-8_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1542 Apr 27 23:12 gffread_0.12.7-8_arm64.changes -rw-r--r-- 1 jenkins jenkins 57372 Apr 27 23:12 gffread_0.12.7-8_arm64.deb -rw-r--r-- 1 jenkins jenkins 1385 Apr 27 23:12 gffread_0.12.7-8_source.changes Sun Apr 27 23:12:09 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sun Apr 27 23:12:10 UTC 2025 I: gffread_0.12.7-8_arm64.changes: Format: 1.8 Date: Wed, 31 Jul 2024 12:54:36 +0200 Source: gffread Binary: gffread gffread-dbgsym Architecture: arm64 Version: 0.12.7-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: gffread - GFF/GTF format conversions, region filtering, FASTA sequence extr Changes: gffread (0.12.7-8) unstable; urgency=medium . [ Charles Plessy ] * Remove Breaks/Replace on cufflinks (<< 2.2.1+dfsg.1-4), as oldstable already has 2.2.1+dfsg.1-8+b1 . [ Michael R. Crusoe ] * d/tests/{control,run-tests}: instead, we explictly skip cnvkit on s390x Checksums-Sha1: 638735fe53607de2e376e8651ececfbabe011e3f 202972 gffread-dbgsym_0.12.7-8_arm64.deb 68a307a29d7eefd0d2392768578af778ca4cd997 4897 gffread_0.12.7-8_arm64.buildinfo 7cdd5bd08a71e2025fbbdcb148b5f4e3b8633713 57372 gffread_0.12.7-8_arm64.deb Checksums-Sha256: 468f642e6c2621b9798efc7ec2ce3f61690ecee1c6441975a0ba3efd1a5c5a60 202972 gffread-dbgsym_0.12.7-8_arm64.deb 3a71d8f38bec48e3d6f6506e8d1428282d4ce5b938e382694d4b545b124a72b3 4897 gffread_0.12.7-8_arm64.buildinfo c393952225666deba576e28c015fc257696337806c03d49738a3f329fa87aff7 57372 gffread_0.12.7-8_arm64.deb Files: 6664f9d625c8aef79d0d8772db2608c1 202972 debug optional gffread-dbgsym_0.12.7-8_arm64.deb d2d96878307f7af2251acc5376362e09 4897 science optional gffread_0.12.7-8_arm64.buildinfo d4d49a083ba5ac3746970ff7bf05b67c 57372 science optional gffread_0.12.7-8_arm64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/gffread_0.12.7-8.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/gffread_0.12.7-8.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/gffread_0.12.7-8.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/gffread_0.12.7-8.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/arm64/gffread_0.12.7-8_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/gffread_0.12.7-8.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-04-27 23:11:30.643925964 +0000 +++ b2/build.log 2025-04-27 23:12:09.539100637 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Apr 27 11:11:01 -12 2025 -I: pbuilder-time-stamp: 1745795461 +I: Current time: Sun May 31 19:34:33 +14 2026 +I: pbuilder-time-stamp: 1780205673 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: applying hardening I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/911484/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 31 05:34 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='6d7e4b6a80ef462e9af85ffd1c7f4fdf' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='911484' - PS1='# ' - PS2='> ' + INVOCATION_ID=66888ab3765447f68e238b1a9880f289 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2576537 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_kwx7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1 --logfile b1/build.log gffread_0.12.7-8.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/pbuilderrc_JUcw --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2 --logfile b2/build.log gffread_0.12.7-8.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-33-cloud-arm64 #1 SMP Debian 6.1.133-1 (2025-04-10) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-33-cloud-arm64 #1 SMP Debian 6.1.133-1 (2025-04-10) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/911484/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -139,7 +171,7 @@ Get: 29 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libgclib3 arm64 0.12.7+ds-6 [134 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libgclib-dev arm64 0.12.7+ds-6 [270 kB] -Fetched 11.3 MB in 0s (35.9 MB/s) +Fetched 11.3 MB in 0s (91.2 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19953 files and directories currently installed.) @@ -278,7 +310,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/gffread-0.12.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../gffread_0.12.7-8_source.changes +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/gffread-0.12.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../gffread_0.12.7-8_source.changes dpkg-buildpackage: info: source package gffread dpkg-buildpackage: info: source version 0.12.7-8 dpkg-buildpackage: info: source distribution unstable @@ -333,8 +369,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'gffread-dbgsym' in '../gffread-dbgsym_0.12.7-8_arm64.deb'. dpkg-deb: building package 'gffread' in '../gffread_0.12.7-8_arm64.deb'. +dpkg-deb: building package 'gffread-dbgsym' in '../gffread-dbgsym_0.12.7-8_arm64.deb'. dpkg-genbuildinfo --build=binary -O../gffread_0.12.7-8_arm64.buildinfo dpkg-genchanges --build=binary -O../gffread_0.12.7-8_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -342,12 +378,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2576537/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/911484 and its subdirectories -I: Current time: Sun Apr 27 11:11:29 -12 2025 -I: pbuilder-time-stamp: 1745795489 +I: removing directory /srv/workspace/pbuilder/2576537 and its subdirectories +I: Current time: Sun May 31 19:35:08 +14 2026 +I: pbuilder-time-stamp: 1780205708 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/gffread_0.12.7-8.diff: 67.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/gffread_0.12.7-8.diff.gz b2/build.log: 73.9% -- replaced with stdout Compressing the 1st log... b1/build.log: 74.8% -- replaced with stdout Sun Apr 27 23:12:11 UTC 2025 I: diffoscope 294 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_gffread_unstable_arm64_1745795531 + touch /var/log/reproducible-builds/diffoscope_stamp_gffread_unstable_arm64_1745795531 + RESULT=0 + systemd-run '--description=diffoscope on gffread/0.12.7-8 in unstable/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_12-92970 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV --run-session -c jenkins-reproducible-unstable-diffoscope-77c8b921-ba85-47c4-9e7b-0d75b9ed38a3 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/dbd-tmp-xEQ6e82 ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/gffread_0.12.7-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/gffread_0.12.7-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/gffread_0.12.7-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1/gffread_0.12.7-8_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2/gffread_0.12.7-8_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_12-92970.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/gffread_0.12.7-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/gffread_0.12.7-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/gffread_0.12.7-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b1/gffread_0.12.7-8_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.zKSpXBiV/b2/gffread_0.12.7-8_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 235ms CPU time consumed: 232ms __ __ _ __ _ / _|/ _|_ __ ___ __ _ __| | / _` | |_| |_| '__/ _ \/ _` |/ _` | | (_| | _| _| | | __/ (_| | (_| | \__, |_| |_| |_| \___|\__,_|\__,_| |___/ Sun Apr 27 23:12:11 UTC 2025 I: diffoscope 294 found no differences in the changes files, and a .buildinfo file also exists. Sun Apr 27 23:12:11 UTC 2025 I: gffread from unstable built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-04-27 23:12:12] INFO: Starting at 2025-04-27 23:12:12.552576 [2025-04-27 23:12:12] INFO: Generating the pages of 1 package(s) [2025-04-27 23:12:12] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/arm64/gffread didn't produce a buildlog, even though it has been built. [2025-04-27 23:12:13] INFO: Finished at 2025-04-27 23:12:13.083902, took: 0:00:00.531333 Sun Apr 27 23:12:13 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/arm64/gffread.html Sun Apr 27 23:12:13 UTC 2025 I: Submitting .buildinfo files to external archives: Sun Apr 27 23:12:13 UTC 2025 I: Submitting 8.0K b1/gffread_0.12.7-8_arm64.buildinfo.asc https://buildinfo.debian.net/68a307a29d7eefd0d2392768578af778ca4cd997/gffread_0.12.7-8_arm64 Sun Apr 27 23:12:39 UTC 2025 I: Submitting 8.0K b2/gffread_0.12.7-8_arm64.buildinfo.asc https://buildinfo.debian.net/bb1f612880e68018641a602988e99579d2cdffc0/gffread_0.12.7-8_arm64 Sun Apr 27 23:13:08 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Apr 27 23:13:08 UTC 2025 I: Done submitting .buildinfo files. Sun Apr 27 23:13:08 UTC 2025 I: Removing signed gffread_0.12.7-8_arm64.buildinfo.asc files: removed './b1/gffread_0.12.7-8_arm64.buildinfo.asc' removed './b2/gffread_0.12.7-8_arm64.buildinfo.asc' 1745795588 arm64 unstable gffread Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/gffread_0.12.7-8.rbuild.log: 70.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/gffread_0.12.7-8.rbuild.log.gz [2025-04-27 23:13:08] INFO: Starting at 2025-04-27 23:13:08.539437 [2025-04-27 23:13:08] INFO: Generating the pages of 1 package(s) [2025-04-27 23:13:08] INFO: Finished at 2025-04-27 23:13:08.918445, took: 0:00:00.379016 All cleanup done. Sun Apr 27 23:13:09 UTC 2025 - total duration: 0h 1m 36s. Sun Apr 27 23:13:09 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-smBe2eJp, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 33.476s CPU time consumed: 7.023s