Running as unit: rb-build-arm64_16-38133.service ==================================================================================== Mon Nov 25 08:08:28 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_16) on jenkins, called using "codethink02-arm64 codethink01-arm64" as arguments. Mon Nov 25 08:08:28 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-aQE9OMPY" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Nov 25 08:08:28 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Mon Nov 25 08:08:28 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-IxdM3g' Mon Nov 25 08:08:29 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink01-arm64.debian.net is marked as down. Mon Nov 25 08:08:29 UTC 2024 - checking via ssh if codethink01-arm64.debian.net is up. removed '/tmp/read-only-fs-test-uyjI9m' ok, let's check if promod3 is building anywhere yet… ok, promod3 is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of promod3 in bookworm on arm64 on jenkins now. 1st build will be done on codethink02-arm64.debian.net. 2nd build will be done on codethink01-arm64.debian.net. ============================================================================= Mon Nov 25 08:08:53 UTC 2024 I: starting to build promod3/bookworm/arm64 on jenkins on '2024-11-25 08:08' Mon Nov 25 08:08:53 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_16/38133/console.log 1732522133 arm64 bookworm promod3 Mon Nov 25 08:08:53 UTC 2024 I: Downloading source for bookworm/promod3=3.2.1+ds-6 --2024-11-25 08:08:53-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/promod3/promod3_3.2.1%2bds-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 3225 (3.1K) [text/prs.lines.tag] Saving to: ‘promod3_3.2.1+ds-6.dsc’ 0K ... 100% 504M=0s 2024-11-25 08:08:53 (504 MB/s) - ‘promod3_3.2.1+ds-6.dsc’ saved [3225/3225] --2024-11-25 08:08:53-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/promod3/promod3_3.2.1%2bds-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 3225 (3.1K) [text/prs.lines.tag] Saving to: ‘promod3_3.2.1+ds-6.dsc’ 0K ... 100% 504M=0s 2024-11-25 08:08:53 (504 MB/s) - ‘promod3_3.2.1+ds-6.dsc’ saved [3225/3225] Mon Nov 25 08:08:53 UTC 2024 I: promod3_3.2.1+ds-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: promod3 Binary: libpromod3-core-dev, libpromod3-core3.2, libpromod3-loop-dev, libpromod3-loop3.2, libpromod3-modelling-dev, libpromod3-modelling3.2, libpromod3-scoring-dev, libpromod3-scoring3.2, libpromod3-sidechain-dev, libpromod3-sidechain3.2, promod3, promod3-data, python3-promod3 Architecture: any all Version: 3.2.1+ds-6 Maintainer: Debichem Team Uploaders: Andrius Merkys , Homepage: https://openstructure.org/promod3/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/debichem-team/promod3 Vcs-Git: https://salsa.debian.org/debichem-team/promod3.git Build-Depends: cmake, debhelper-compat (= 13), dh-python, libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-python-dev, libboost-test-dev, libeigen3-dev, libost-base-dev, libost-conop-dev, libost-geom-dev, libost-img-dev, libost-info-dev, libost-io-dev, libost-mol-alg-dev, libost-mol-dev, libost-mol-mm-dev, libost-seq-alg-dev, libost-seq-dev, openstructure (>= 2.3.1-6), python3-dev, python3-ost Package-List: libpromod3-core-dev deb libdevel optional arch=any libpromod3-core3.2 deb libs optional arch=any libpromod3-loop-dev deb libdevel optional arch=any libpromod3-loop3.2 deb libs optional arch=any libpromod3-modelling-dev deb libdevel optional arch=any libpromod3-modelling3.2 deb libs optional arch=any libpromod3-scoring-dev deb libdevel optional arch=any libpromod3-scoring3.2 deb libs optional arch=any libpromod3-sidechain-dev deb libdevel optional arch=any libpromod3-sidechain3.2 deb libs optional arch=any promod3 deb science optional arch=any promod3-data deb science optional arch=all python3-promod3 deb python optional arch=any Checksums-Sha1: 7f263538849dfa7f98d19e2a09c7a14e0aad391f 409722336 promod3_3.2.1+ds.orig.tar.xz d435945c182fc24cb6d1a6b64ad39b7050513429 6608 promod3_3.2.1+ds-6.debian.tar.xz Checksums-Sha256: 108cc7142eccfc22b0c69cea85f8585535f486492217dfafb4e333934c04c741 409722336 promod3_3.2.1+ds.orig.tar.xz d097038dae179ac457d80946d8f3f21336c7d3e9ff0eb9b5d0e6ee4f5dbed19d 6608 promod3_3.2.1+ds-6.debian.tar.xz Files: 5446d0ef42bc3643f80acf95e6c16ae1 409722336 promod3_3.2.1+ds.orig.tar.xz 500321efa6d5246a7f2b5d418d25e9c1 6608 promod3_3.2.1+ds-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmN8hkoSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKH1K0P/iuMHBQJAGaQJrAgntdgjdUS8RpcY+Sa LZvMKp9UgNyZuX2fpEnZ6F650n4LiitJZOmizdCvofka40Gy8/5p9KEp6t1R1kEh zvA78JGyKcJhMB6uEKyeuKRUb7q4fe2Z0UyeepJX5lw/eegp85FF+aNB5ihWF2lZ F6jzepZy1SUThSuJN4rDUlLlWwWJUOOs0DGDDEjf09Eumt5nB9qrgxgQmuIukxXR SFqCoCShB6VwcfP3lO3LxWP0OLWBeJ5ENZzr0OybpyIO5916nfGEbK3sBYZwkvus bsN38eO2RMZCBt1MgZuVy6JOZVlJ0aA7aAc472VFT0OhJlWVFcVBFWYGzBHZ8nVk VxW3NYy8vlwcLCIjnWIMGsnYvhhtfobqVvhRq6KXqhV52+nBek4PzpARE1p8Ug8S yyW95aZvEs2fJB14nmVFl9P94aXrzZG3ftT8S9TpwJ2HuxL17p3UvLSwjSI29WXE yxHmd2hzHuQt5JHu34WkP1b4952lE3SJbT61tgxKiXVohqxvPaVrtoQaL/Aeak78 nksZRCL4pRx84n+3zgTK2IZmgERuwBJ91I2l72/mVhMVcszhO0Z7rU/ngLR9ioyz q/uZRPEhtiKCUDXRY+SGHezbCWUGV294Pz/HpFWInP9OG+9Z0QogJMAez6rC0Ean 7TrYIK5s5ZfO =xhBy -----END PGP SIGNATURE----- Mon Nov 25 08:08:53 UTC 2024 I: Checking whether the package is not for us Mon Nov 25 08:08:53 UTC 2024 I: Starting 1st build on remote node codethink02-arm64.debian.net. Mon Nov 25 08:08:53 UTC 2024 I: Preparing to do remote build '1' on codethink02-arm64.debian.net. Mon Nov 25 08:08:53 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Mon Nov 25 08:08:53 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-0SGzrM' ==================================================================================== Mon Nov 25 08:08:55 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink02-arm64, called using "1 promod3 bookworm /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K 3.2.1+ds-6" as arguments. Mon Nov 25 08:08:55 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-i2beT9xT" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Mon Nov 25 08:08:55 UTC 2024 I: Downloading source for bookworm/promod3=3.2.1+ds-6 Reading package lists... NOTICE: 'promod3' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/promod3.git Please use: git clone https://salsa.debian.org/debichem-team/promod3.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 410 MB of source archives. Get:1 http://deb.debian.org/debian bookworm/main promod3 3.2.1+ds-6 (dsc) [3225 B] Get:2 http://deb.debian.org/debian bookworm/main promod3 3.2.1+ds-6 (tar) [410 MB] Get:3 http://deb.debian.org/debian bookworm/main promod3 3.2.1+ds-6 (diff) [6608 B] Fetched 410 MB in 8s (53.6 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'promod3' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/promod3.git Please use: git clone https://salsa.debian.org/debichem-team/promod3.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 410 MB of source archives. Get:1 http://deb.debian.org/debian bookworm/main promod3 3.2.1+ds-6 (dsc) [3225 B] Get:2 http://deb.debian.org/debian bookworm/main promod3 3.2.1+ds-6 (tar) [410 MB] Get:3 http://deb.debian.org/debian bookworm/main promod3 3.2.1+ds-6 (diff) [6608 B] Fetched 410 MB in 8s (53.6 MB/s) Download complete and in download only mode ============================================================================= Building promod3 in bookworm on arm64 on codethink02-arm64 now. Date: Mon Nov 25 08:09:03 GMT 2024 Date UTC: Mon Nov 25 08:09:03 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 24 20:09:03 -12 2024 I: pbuilder-time-stamp: 1732522143 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [promod3_3.2.1+ds-6.dsc] I: copying [./promod3_3.2.1+ds.orig.tar.xz] I: copying [./promod3_3.2.1+ds-6.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Nov 21 20:20:26 2022 -12 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./promod3_3.2.1+ds-6.dsc: no acceptable signature found dpkg-source: info: extracting promod3 in promod3-3.2.1+ds dpkg-source: info: unpacking promod3_3.2.1+ds.orig.tar.xz dpkg-source: info: unpacking promod3_3.2.1+ds-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying find-OST.patch dpkg-source: info: applying add-python3-shebangs.patch dpkg-source: info: applying PM3ArgParseTests.patch dpkg-source: info: applying 7102f98564702dad9903dc77c6c5a940ea8f7777.patch dpkg-source: info: applying promod-executable.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3445375/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='39bf80d836444422a873e0883d3d630e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3445375' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K/pbuilderrc_jC1K --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K/b1 --logfile b1/build.log promod3_3.2.1+ds-6.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink02-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin total 7104 -rwxr-xr-x 1 root root 1346480 Mar 29 2024 bash -rwxr-xr-x 3 root root 67728 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67728 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67728 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67664 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 68536 Sep 20 2022 cat -rwxr-xr-x 1 root root 68616 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 68552 Sep 20 2022 chmod -rwxr-xr-x 1 root root 68632 Sep 20 2022 chown -rwxr-xr-x 1 root root 200264 Sep 20 2022 cp -rwxr-xr-x 1 root root 133640 Jan 5 2023 dash -rwxr-xr-x 1 root root 134144 Sep 20 2022 date -rwxr-xr-x 1 root root 134248 Sep 20 2022 dd -rwxr-xr-x 1 root root 134888 Sep 20 2022 df -rwxr-xr-x 1 root root 200440 Sep 20 2022 dir -rwxr-xr-x 1 root root 141720 Oct 18 00:56 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 68408 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 68384 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 134584 Oct 18 00:56 findmnt -rwsr-xr-x 1 root root 67744 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 198880 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 93752 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67592 Dec 19 2022 hostname -rwxr-xr-x 1 root root 68664 Sep 20 2022 ln -rwxr-xr-x 1 root root 69208 Mar 22 2023 login -rwxr-xr-x 1 root root 200440 Sep 20 2022 ls -rwxr-xr-x 1 root root 264360 Oct 18 00:56 lsblk -rwxr-xr-x 1 root root 134384 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 68768 Sep 20 2022 mknod -rwxr-xr-x 1 root root 68472 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 67752 Oct 18 00:56 more -rwsr-xr-x 1 root root 67744 Oct 18 00:56 mount -rwxr-xr-x 1 root root 67744 Oct 18 00:56 mountpoint -rwxr-xr-x 1 root root 134728 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 68496 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Mar 29 2024 rbash -> bash -rwxr-xr-x 1 root root 68456 Sep 20 2022 readlink -rwxr-xr-x 1 root root 68592 Sep 20 2022 rm -rwxr-xr-x 1 root root 68480 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 68392 Jul 28 2023 run-parts -rwxr-xr-x 1 root root 134536 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 68432 Sep 20 2022 sleep -rwxr-xr-x 1 root root 134088 Sep 20 2022 stty -rwsr-xr-x 1 root root 133312 Oct 18 00:56 su -rwxr-xr-x 1 root root 68448 Sep 20 2022 sync -rwxr-xr-x 1 root root 539896 Jan 19 2024 tar -rwxr-xr-x 1 root root 67904 Jul 28 2023 tempfile -rwxr-xr-x 1 root root 134160 Sep 20 2022 touch -rwxr-xr-x 1 root root 68384 Sep 20 2022 true -rwxr-xr-x 1 root root 67664 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 67744 Oct 18 00:56 umount -rwxr-xr-x 1 root root 68416 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 200440 Sep 20 2022 vdir -rwxr-xr-x 1 root root 133312 Oct 18 00:56 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3445375/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), dh-python, libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-python-dev, libboost-test-dev, libeigen3-dev, libost-base-dev, libost-conop-dev, libost-geom-dev, libost-img-dev, libost-info-dev, libost-io-dev, libost-mol-alg-dev, libost-mol-dev, libost-mol-mm-dev, libost-seq-alg-dev, libost-seq-dev, openstructure (>= 2.3.1-6), python3-dev, python3-ost dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19569 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-python-dev; however: Package libboost-python-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev; however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-base-dev; however: Package libost-base-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-conop-dev; however: Package libost-conop-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-geom-dev; however: Package libost-geom-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-img-dev; however: Package libost-img-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-info-dev; however: Package libost-info-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-io-dev; however: Package libost-io-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-mol-alg-dev; however: Package libost-mol-alg-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-mol-dev; however: Package libost-mol-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-mol-mm-dev; however: Package libost-mol-mm-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-seq-alg-dev; however: Package libost-seq-alg-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-seq-dev; however: Package libost-seq-dev is not installed. pbuilder-satisfydepends-dummy depends on openstructure (>= 2.3.1-6); however: Package openstructure is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ost; however: Package python3-ost is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-filesystem-dev{a} libboost-filesystem1.74-dev{a} libboost-filesystem1.74.0{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-python-dev{a} libboost-python1.74-dev{a} libboost-python1.74.0{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-test-dev{a} libboost-test1.74-dev{a} libboost-test1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libeigen3-dev{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} media-types{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 97 newly installed, 0 to remove and 0 not upgraded. Need to get 69.5 MB of archives. After unpacking 422 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: libost-base-dev which is a virtual package and is not provided by any available package Depends: libost-conop-dev which is a virtual package and is not provided by any available package Depends: libost-geom-dev which is a virtual package and is not provided by any available package Depends: libost-img-dev which is a virtual package and is not provided by any available package Depends: libost-info-dev which is a virtual package and is not provided by any available package Depends: libost-io-dev which is a virtual package and is not provided by any available package Depends: libost-mol-alg-dev which is a virtual package and is not provided by any available package Depends: libost-mol-dev which is a virtual package and is not provided by any available package Depends: libost-mol-mm-dev which is a virtual package and is not provided by any available package Depends: libost-seq-alg-dev which is a virtual package and is not provided by any available package Depends: libost-seq-dev which is a virtual package and is not provided by any available package Depends: openstructure (>= 2.3.1-6) which is a virtual package and is not provided by any available package Depends: python3-ost which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-filesystem-dev{a} libboost-filesystem1.74-dev{a} libboost-filesystem1.74.0{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-python-dev{a} libboost-python1.74-dev{a} libboost-python1.74.0{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-test-dev{a} libboost-test1.74-dev{a} libboost-test1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libeigen3-dev{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} media-types{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 97 newly installed, 0 to remove and 0 not upgraded. Need to get 69.5 MB of archives. After unpacking 422 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3445375 and its subdirectories Starting cleanup. All cleanup done. Mon Nov 25 08:09:50 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-i2beT9xT, removing. /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K: total 20 drwxr-xr-x 2 jenkins jenkins 4096 Nov 25 08:09 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 25 08:08 b2 -rw-r--r-- 1 jenkins jenkins 3225 Nov 22 2022 promod3_3.2.1+ds-6.dsc -rw------- 1 jenkins jenkins 4363 Nov 25 08:08 rbuildlog.bHJeOwC /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K/b1: total 20 -rw-r--r-- 1 jenkins jenkins 18746 Nov 25 08:09 build.log /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K/b2: total 0 Mon Nov 25 08:09:51 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 24 20:09:03 -12 2024 I: pbuilder-time-stamp: 1732522143 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [promod3_3.2.1+ds-6.dsc] I: copying [./promod3_3.2.1+ds.orig.tar.xz] I: copying [./promod3_3.2.1+ds-6.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Nov 21 20:20:26 2022 -12 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./promod3_3.2.1+ds-6.dsc: no acceptable signature found dpkg-source: info: extracting promod3 in promod3-3.2.1+ds dpkg-source: info: unpacking promod3_3.2.1+ds.orig.tar.xz dpkg-source: info: unpacking promod3_3.2.1+ds-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying find-OST.patch dpkg-source: info: applying add-python3-shebangs.patch dpkg-source: info: applying PM3ArgParseTests.patch dpkg-source: info: applying 7102f98564702dad9903dc77c6c5a940ea8f7777.patch dpkg-source: info: applying promod-executable.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3445375/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='39bf80d836444422a873e0883d3d630e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3445375' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K/pbuilderrc_jC1K --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zfRfD04K/b1 --logfile b1/build.log promod3_3.2.1+ds-6.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink02-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin total 7104 -rwxr-xr-x 1 root root 1346480 Mar 29 2024 bash -rwxr-xr-x 3 root root 67728 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 67728 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 67728 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 67664 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 68536 Sep 20 2022 cat -rwxr-xr-x 1 root root 68616 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 68552 Sep 20 2022 chmod -rwxr-xr-x 1 root root 68632 Sep 20 2022 chown -rwxr-xr-x 1 root root 200264 Sep 20 2022 cp -rwxr-xr-x 1 root root 133640 Jan 5 2023 dash -rwxr-xr-x 1 root root 134144 Sep 20 2022 date -rwxr-xr-x 1 root root 134248 Sep 20 2022 dd -rwxr-xr-x 1 root root 134888 Sep 20 2022 df -rwxr-xr-x 1 root root 200440 Sep 20 2022 dir -rwxr-xr-x 1 root root 141720 Oct 18 00:56 dmesg lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname -rwxr-xr-x 1 root root 68408 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep -rwxr-xr-x 1 root root 68384 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 134584 Oct 18 00:56 findmnt -rwsr-xr-x 1 root root 67744 Mar 22 2023 fusermount -rwxr-xr-x 1 root root 198880 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 93752 Apr 9 2022 gzip -rwxr-xr-x 1 root root 67592 Dec 19 2022 hostname -rwxr-xr-x 1 root root 68664 Sep 20 2022 ln -rwxr-xr-x 1 root root 69208 Mar 22 2023 login -rwxr-xr-x 1 root root 200440 Sep 20 2022 ls -rwxr-xr-x 1 root root 264360 Oct 18 00:56 lsblk -rwxr-xr-x 1 root root 134384 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 68768 Sep 20 2022 mknod -rwxr-xr-x 1 root root 68472 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 67752 Oct 18 00:56 more -rwsr-xr-x 1 root root 67744 Oct 18 00:56 mount -rwxr-xr-x 1 root root 67744 Oct 18 00:56 mountpoint -rwxr-xr-x 1 root root 134728 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 68496 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Mar 29 2024 rbash -> bash -rwxr-xr-x 1 root root 68456 Sep 20 2022 readlink -rwxr-xr-x 1 root root 68592 Sep 20 2022 rm -rwxr-xr-x 1 root root 68480 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 68392 Jul 28 2023 run-parts -rwxr-xr-x 1 root root 134536 Jan 5 2023 sed lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash -rwxr-xr-x 1 root root 68432 Sep 20 2022 sleep -rwxr-xr-x 1 root root 134088 Sep 20 2022 stty -rwsr-xr-x 1 root root 133312 Oct 18 00:56 su -rwxr-xr-x 1 root root 68448 Sep 20 2022 sync -rwxr-xr-x 1 root root 539896 Jan 19 2024 tar -rwxr-xr-x 1 root root 67904 Jul 28 2023 tempfile -rwxr-xr-x 1 root root 134160 Sep 20 2022 touch -rwxr-xr-x 1 root root 68384 Sep 20 2022 true -rwxr-xr-x 1 root root 67664 Mar 22 2023 ulockmgr_server -rwsr-xr-x 1 root root 67744 Oct 18 00:56 umount -rwxr-xr-x 1 root root 68416 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 200440 Sep 20 2022 vdir -rwxr-xr-x 1 root root 133312 Oct 18 00:56 wdctl lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3445375/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), dh-python, libboost-filesystem-dev, libboost-iostreams-dev, libboost-program-options-dev, libboost-python-dev, libboost-test-dev, libeigen3-dev, libost-base-dev, libost-conop-dev, libost-geom-dev, libost-img-dev, libost-info-dev, libost-io-dev, libost-mol-alg-dev, libost-mol-dev, libost-mol-mm-dev, libost-seq-alg-dev, libost-seq-dev, openstructure (>= 2.3.1-6), python3-dev, python3-ost dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19569 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-python-dev; however: Package libboost-python-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev; however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-base-dev; however: Package libost-base-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-conop-dev; however: Package libost-conop-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-geom-dev; however: Package libost-geom-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-img-dev; however: Package libost-img-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-info-dev; however: Package libost-info-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-io-dev; however: Package libost-io-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-mol-alg-dev; however: Package libost-mol-alg-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-mol-dev; however: Package libost-mol-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-mol-mm-dev; however: Package libost-mol-mm-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-seq-alg-dev; however: Package libost-seq-alg-dev is not installed. pbuilder-satisfydepends-dummy depends on libost-seq-dev; however: Package libost-seq-dev is not installed. pbuilder-satisfydepends-dummy depends on openstructure (>= 2.3.1-6); however: Package openstructure is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ost; however: Package python3-ost is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-filesystem-dev{a} libboost-filesystem1.74-dev{a} libboost-filesystem1.74.0{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-python-dev{a} libboost-python1.74-dev{a} libboost-python1.74.0{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-test-dev{a} libboost-test1.74-dev{a} libboost-test1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libeigen3-dev{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} media-types{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 97 newly installed, 0 to remove and 0 not upgraded. Need to get 69.5 MB of archives. After unpacking 422 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: libost-base-dev which is a virtual package and is not provided by any available package Depends: libost-conop-dev which is a virtual package and is not provided by any available package Depends: libost-geom-dev which is a virtual package and is not provided by any available package Depends: libost-img-dev which is a virtual package and is not provided by any available package Depends: libost-info-dev which is a virtual package and is not provided by any available package Depends: libost-io-dev which is a virtual package and is not provided by any available package Depends: libost-mol-alg-dev which is a virtual package and is not provided by any available package Depends: libost-mol-dev which is a virtual package and is not provided by any available package Depends: libost-mol-mm-dev which is a virtual package and is not provided by any available package Depends: libost-seq-alg-dev which is a virtual package and is not provided by any available package Depends: libost-seq-dev which is a virtual package and is not provided by any available package Depends: openstructure (>= 2.3.1-6) which is a virtual package and is not provided by any available package Depends: python3-ost which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libboost-filesystem-dev{a} libboost-filesystem1.74-dev{a} libboost-filesystem1.74.0{a} libboost-iostreams-dev{a} libboost-iostreams1.74-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost-python-dev{a} libboost-python1.74-dev{a} libboost-python1.74.0{a} libboost-regex1.74-dev{a} libboost-regex1.74.0{a} libboost-system1.74-dev{a} libboost-system1.74.0{a} libboost-test-dev{a} libboost-test1.74-dev{a} libboost-test1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libeigen3-dev{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} media-types{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 97 newly installed, 0 to remove and 0 not upgraded. Need to get 69.5 MB of archives. After unpacking 422 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3445375 and its subdirectories promod3 failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/bookworm/arm64/promod3_3.2.1+ds-6.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/bookworm/arm64/promod3_3.2.1+ds-6.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/arm64/promod3_3.2.1+ds-6.build1.log.gz' Mon Nov 25 08:09:52 UTC 2024 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 77.2% -- replaced with stdout Mon Nov 25 08:09:52 UTC 2024 W: Downloading the build dependencies failed Mon Nov 25 08:09:52 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Mon Nov 25 08:09:52 UTC 2024 W: Network problems are automatically rescheduled after some hours. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-25 08:09:53] INFO: Starting at 2024-11-25 08:09:53.361636 [2024-11-25 08:09:53] INFO: Generating the pages of 1 package(s) [2024-11-25 08:09:53] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/promod3_3.4.0+ds-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/promod3_3.4.0+ds-1.diff.gz is missing [2024-11-25 08:09:53] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/promod3_3.4.0+ds-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/promod3_3.4.0+ds-1.diff.gz is missing [2024-11-25 08:09:53] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/promod3_3.4.0+ds-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/promod3_3.4.0+ds-1.diff.gz is missing [2024-11-25 08:09:53] CRITICAL: https://tests.reproducible-builds.org/debian/bookworm/arm64/promod3 didn't produce a buildlog, even though it has been built. [2024-11-25 08:09:53] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/promod3_3.2.1+ds-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/promod3_3.2.1+ds-6.diff.gz is missing [2024-11-25 08:09:53] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/promod3_3.2.1+ds-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/promod3_3.2.1+ds-6.diff.gz is missing [2024-11-25 08:09:53] INFO: Finished at 2024-11-25 08:09:53.791740, took: 0:00:00.430108 Mon Nov 25 08:09:53 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/bookworm/arm64/promod3.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/bookworm/arm64/promod3_3.2.1+ds-6.rbuild.log: 73.7% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/bookworm/arm64/promod3_3.2.1+ds-6.rbuild.log.gz [2024-11-25 08:09:54] INFO: Starting at 2024-11-25 08:09:54.143684 [2024-11-25 08:09:54] INFO: Generating the pages of 1 package(s) [2024-11-25 08:09:54] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/promod3_3.4.0+ds-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/promod3_3.4.0+ds-1.diff.gz is missing [2024-11-25 08:09:54] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/promod3_3.4.0+ds-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/promod3_3.4.0+ds-1.diff.gz is missing [2024-11-25 08:09:54] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/promod3_3.4.0+ds-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/promod3_3.4.0+ds-1.diff.gz is missing [2024-11-25 08:09:54] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/arm64/promod3_3.2.1+ds-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/arm64/promod3_3.2.1+ds-6.diff.gz is missing [2024-11-25 08:09:54] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/promod3_3.2.1+ds-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/promod3_3.2.1+ds-6.diff.gz is missing [2024-11-25 08:09:54] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/promod3_3.2.1+ds-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/promod3_3.2.1+ds-6.diff.gz is missing [2024-11-25 08:09:54] INFO: Finished at 2024-11-25 08:09:54.593382, took: 0:00:00.449702 All cleanup done. Mon Nov 25 08:09:54 UTC 2024 - total duration: 0h 1m 24s. Mon Nov 25 08:09:54 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-aQE9OMPY, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1min 26.411s CPU time consumed: 4.706s