Running as unit: rb-build-arm64_19-46260.service ==================================================================================== Sun Nov 24 09:33:13 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_19) on jenkins, called using "codethink02-arm64 codethink03-arm64" as arguments. Sun Nov 24 09:33:13 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-SGgy7ILh" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Nov 24 09:33:13 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Sun Nov 24 09:33:13 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-pNAxsW' Sun Nov 24 09:33:14 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Sun Nov 24 09:33:14 UTC 2024 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-KUPeE0' ok, let's check if snap is building anywhere yet… ok, snap is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of snap in trixie on arm64 on jenkins now. 1st build will be done on codethink02-arm64.debian.net. 2nd build will be done on codethink03-arm64.debian.net. ============================================================================= Sun Nov 24 09:33:20 UTC 2024 I: starting to build snap/trixie/arm64 on jenkins on '2024-11-24 09:33' Sun Nov 24 09:33:20 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_19/46260/console.log 1732440800 arm64 trixie snap Sun Nov 24 09:33:20 UTC 2024 I: Downloading source for trixie/snap=2013-11-29-11 --2024-11-24 09:33:20-- http://deb.debian.org/debian/pool/main/s/snap/snap_2013-11-29-11.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2043 (2.0K) [text/prs.lines.tag] Saving to: ‘snap_2013-11-29-11.dsc’ 0K . 100% 254M=0s 2024-11-24 09:33:20 (254 MB/s) - ‘snap_2013-11-29-11.dsc’ saved [2043/2043] --2024-11-24 09:33:20-- http://deb.debian.org/debian/pool/main/s/snap/snap_2013-11-29-11.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2043 (2.0K) [text/prs.lines.tag] Saving to: ‘snap_2013-11-29-11.dsc’ 0K . 100% 254M=0s 2024-11-24 09:33:20 (254 MB/s) - ‘snap_2013-11-29-11.dsc’ saved [2043/2043] Sun Nov 24 09:33:20 UTC 2024 I: snap_2013-11-29-11.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: snap Binary: snap Architecture: any Version: 2013-11-29-11 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Pierre Gruet Homepage: https://github.com/KorfLab/SNAP Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/snap Vcs-Git: https://salsa.debian.org/med-team/snap.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@ Build-Depends: debhelper-compat (= 13), help2man Package-List: snap deb science optional arch=any Checksums-Sha1: d5d90cab0073a6a2c0d0241eea9beb0aa208e84e 688858 snap_2013-11-29.orig.tar.gz 2e8788a93d05b075e801408c9bd6badf0b639735 10888 snap_2013-11-29-11.debian.tar.xz Checksums-Sha256: 0ebcd8bb45da54588a81f392baede387fd5ec2a5feb259f3db4b8b8f410abe9c 688858 snap_2013-11-29.orig.tar.gz 21c979b9aec842933b4571b602fe49968cff54fe400365296ce3cbbaef0b5a51 10888 snap_2013-11-29-11.debian.tar.xz Files: d23788065b6dc9d66d619133dd55dae7 688858 snap_2013-11-29.orig.tar.gz 0ac7bd6354519e7cdc9bcdd53c76fb9a 10888 snap_2013-11-29-11.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEM8soQxPpC9J9y0UjYAMWptwndHYFAl/0uwsACgkQYAMWptwn dHYRnRAAq9eFFFUbQ7AdeRxK64xP0en47o7D05eJpbv865m+NRdXbCDQ5kt6Tnpt 6KbXp6/YInaqf6EKGwuWat/jSK4E3S/zdGJvFDNn2BceQkSYH7tvSyPOJ29W99fu aFmykI9hVt7kB9w2R+E3jvh3RnyVidsB5M6xkggbW86t+SZ7DdGqPx5wxsCzEjs0 /+R7g+MqFhFfOvCQj14ed2ek2Iv4M4RqDKCqts2UTeV+WH6TEK+DZ1iLmU0T2M/N 1oC9A3IbsvTtwI0PBx5rk4C3Rtmj7DxawiScAahCkuqsosrrrmPDoJlTp7uIv7CC 7efQ8Qqa/7B67d39A9ZXAzAkPv4VQEtwUBXyBt/ZjKFpoWs6Phxtli+eVWvAHoVS MKFTvoLPXe4XnYGsMPeqqLPP18quFYQ21CZ8+Yv4djKX2s0iZUG8RutkkkI2Rhs+ uOToIj3VERmj5f6rrz/mNJcNQyD9sPuQFF2LSqVwT/9cBxMvVzfUK92FX3uE2qpJ j8PffoUHRYnxzj6BS5U0EG12WFAxaQNDtSfMzSYPWLVmpiiLN2WPyCwXYJEEmbnt x4Tey/ZHrFjiq/FSwTCmm0wheUxM06dgySgR2rt6394ukG1xIuZEQ7Tp6POK+IyB GbNeyRnQ6nBnKzmF/qPTe619nZVrdAkfjKoYzEXDmYkmEjWq0pw= =epTZ -----END PGP SIGNATURE----- Sun Nov 24 09:33:20 UTC 2024 I: Checking whether the package is not for us Sun Nov 24 09:33:20 UTC 2024 I: Starting 1st build on remote node codethink02-arm64.debian.net. Sun Nov 24 09:33:20 UTC 2024 I: Preparing to do remote build '1' on codethink02-arm64.debian.net. Sun Nov 24 09:33:20 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Sun Nov 24 09:33:20 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-dJo1As' ==================================================================================== Sun Nov 24 09:33:22 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink02-arm64, called using "1 snap trixie /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9 2013-11-29-11" as arguments. Sun Nov 24 09:33:22 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-A4dLh4FY" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Nov 24 09:33:22 UTC 2024 I: Downloading source for trixie/snap=2013-11-29-11 Reading package lists... NOTICE: 'snap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap.git Please use: git clone https://salsa.debian.org/med-team/snap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 702 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (dsc) [2043 B] Get:2 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (tar) [689 kB] Get:3 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (diff) [10.9 kB] Fetched 702 kB in 0s (9024 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'snap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap.git Please use: git clone https://salsa.debian.org/med-team/snap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 702 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (dsc) [2043 B] Get:2 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (tar) [689 kB] Get:3 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (diff) [10.9 kB] Fetched 702 kB in 0s (9024 kB/s) Download complete and in download only mode ============================================================================= Building snap in trixie on arm64 on codethink02-arm64 now. Date: Sun Nov 24 09:33:22 GMT 2024 Date UTC: Sun Nov 24 09:33:22 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 21:33:23 -12 2024 I: pbuilder-time-stamp: 1732440803 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [snap_2013-11-29-11.dsc] I: copying [./snap_2013-11-29.orig.tar.gz] I: copying [./snap_2013-11-29-11.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jan 5 19:16:27 2021 gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./snap_2013-11-29-11.dsc: no acceptable signature found dpkg-source: info: extracting snap in snap-2013-11-29 dpkg-source: info: unpacking snap_2013-11-29.orig.tar.gz dpkg-source: info: unpacking snap_2013-11-29-11.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying unused-but-set-variable.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying build-with-gcc-6.patch dpkg-source: info: applying use-CC.patch dpkg-source: info: applying replace_itoa_with_broken_indentation.patch dpkg-source: info: applying fix_missing_braces_in_if_statements.patch dpkg-source: info: applying gcc-8.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying gcc-10-multiple_definitions.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2045764/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='6532a2d7b3ba4814bab3f3408954a1e8' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2045764' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_7AFu --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1 --logfile b1/build.log snap_2013-11-29-11.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink02-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2045764/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), help2man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20087 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 19.6 MB of archives. After unpacking 78.5 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 liblocale-gettext-perl arm64 1.07-7+b1 [15.2 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-8 [517 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 help2man arm64 1.49.3+b1 [198 kB] Fetched 19.6 MB in 0s (138 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20087 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_arm64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package help2man. Preparing to unpack .../30-help2man_1.49.3+b1_arm64.deb ... Unpacking help2man (1.49.3+b1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3+b1) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/snap-2013-11-29/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snap_2013-11-29-11_source.changes dpkg-buildpackage: info: source package snap dpkg-buildpackage: info: source version 2013-11-29-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' touch depend Zoe/depend dh_auto_clean make -j12 clean make[2]: Entering directory '/build/reproducible-path/snap-2013-11-29' rm -f *.o snap fathom forge hmm-info exonpairs cd Zoe; make clean make[3]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. rm -f *.o zoe-loop lexica seqedit seqstats twinkle make[3]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[2]: Leaving directory '/build/reproducible-path/snap-2013-11-29' if [ -f depend.orig ] ; then mv depend.orig depend; fi if [ -f Zoe/depend.orig ] ; then mv Zoe/depend.orig Zoe/depend; fi make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' dh_auto_build CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make -j12 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/snap-2013-11-29' make gcc make[3]: Entering directory '/build/reproducible-path/snap-2013-11-29' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd Zoe; make CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard"; make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make gcc CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[5]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make zoe-loop CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[6]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoe-loop.o zoe-loop.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeAlignment.o zoeAlignment.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeCDS.o zoeCDS.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeCounter.o zoeCounter.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDNA.o zoeDNA.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDistribution.o zoeDistribution.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDuration.o zoeDuration.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFastaFile.o zoeFastaFile.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeature.o zoeFeature.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeatureFactory.o zoeFeatureFactory.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeatureTable.o zoeFeatureTable.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeHMM.o zoeHMM.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeIsochore.o zoeIsochore.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeMath.o zoeMath.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeModel.o zoeModel.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoePhasePref.o zoePhasePref.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeProtein.o zoeProtein.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeScanner.o zoeScanner.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeState.o zoeState.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTools.o zoeTools.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTransition.o zoeTransition.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTrellis.o zoeTrellis.c cc -o zoe-loop -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 zoe-loop.o zoeAlignment.o zoeCDS.o zoeCounter.o zoeDNA.o zoeDistribution.o zoeDuration.o zoeFastaFile.o zoeFeature.o zoeFeatureFactory.o zoeFeatureTable.o zoeHMM.o zoeIsochore.o zoeMath.o zoeModel.o zoePhasePref.o zoeProtein.o zoeScanner.o zoeState.o zoeTools.o zoeTransition.o zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[6]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[5]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make snap CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o snap.o snap.c cc -o snap -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 snap.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make fathom CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o fathom.o fathom.c cc -o fathom -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 fathom.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make forge CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o forge.o forge.c cc -o forge -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 forge.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make hmm-info CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o hmm-info.o hmm-info.c cc -o hmm-info -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 hmm-info.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make exonpairs CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o exonpairs.o exonpairs.c cc -o exonpairs -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 exonpairs.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[3]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[2]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/snap/ debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' dh_install # cds-trainer.pl and noncoding-trainer.pl are needing the following Perl modules: # IK.pm, FAlite.pm, DataBrowser.pm # since these are not available in Debian there is no point in installing this script find debian -name cds-trainer.pl -delete find debian -name noncoding-trainer.pl -delete make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package snap: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package snap: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'snap' in '../snap_2013-11-29-11_arm64.deb'. dpkg-deb: building package 'snap-dbgsym' in '../snap-dbgsym_2013-11-29-11_arm64.deb'. dpkg-genbuildinfo --build=binary -O../snap_2013-11-29-11_arm64.buildinfo dpkg-genchanges --build=binary -O../snap_2013-11-29-11_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2045764 and its subdirectories I: Current time: Sat Nov 23 21:33:58 -12 2024 I: pbuilder-time-stamp: 1732440838 Sun Nov 24 09:33:58 UTC 2024 I: Signing ./b1/snap_2013-11-29-11_arm64.buildinfo as snap_2013-11-29-11_arm64.buildinfo.asc Sun Nov 24 09:33:58 UTC 2024 I: Signed ./b1/snap_2013-11-29-11_arm64.buildinfo as ./b1/snap_2013-11-29-11_arm64.buildinfo.asc Sun Nov 24 09:33:58 UTC 2024 - build #1 for snap/trixie/arm64 on codethink02-arm64 done. Starting cleanup. All cleanup done. Sun Nov 24 09:33:58 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-A4dLh4FY, removing. /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 09:33 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 09:33 b2 -rw------- 1 jenkins jenkins 3158 Nov 24 09:33 rbuildlog.n0CWtmE -rw-r--r-- 1 jenkins jenkins 2043 Jan 5 2021 snap_2013-11-29-11.dsc /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1: total 1284 -rw-r--r-- 1 jenkins jenkins 36613 Nov 24 09:33 build.log -rw-r--r-- 1 jenkins jenkins 860252 Nov 24 09:33 snap-dbgsym_2013-11-29-11_arm64.deb -rw-r--r-- 1 jenkins jenkins 10888 Nov 24 09:33 snap_2013-11-29-11.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2043 Nov 24 09:33 snap_2013-11-29-11.dsc -rw-r--r-- 1 jenkins jenkins 5022 Nov 24 09:33 snap_2013-11-29-11_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5904 Nov 24 09:33 snap_2013-11-29-11_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1460 Nov 24 09:33 snap_2013-11-29-11_arm64.changes -rw-r--r-- 1 jenkins jenkins 372484 Nov 24 09:33 snap_2013-11-29-11_arm64.deb -rw-r--r-- 1 jenkins jenkins 1314 Nov 24 09:33 snap_2013-11-29-11_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2: total 0 Sun Nov 24 09:33:59 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 21:33:23 -12 2024 I: pbuilder-time-stamp: 1732440803 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [snap_2013-11-29-11.dsc] I: copying [./snap_2013-11-29.orig.tar.gz] I: copying [./snap_2013-11-29-11.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jan 5 19:16:27 2021 gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./snap_2013-11-29-11.dsc: no acceptable signature found dpkg-source: info: extracting snap in snap-2013-11-29 dpkg-source: info: unpacking snap_2013-11-29.orig.tar.gz dpkg-source: info: unpacking snap_2013-11-29-11.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying unused-but-set-variable.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying build-with-gcc-6.patch dpkg-source: info: applying use-CC.patch dpkg-source: info: applying replace_itoa_with_broken_indentation.patch dpkg-source: info: applying fix_missing_braces_in_if_statements.patch dpkg-source: info: applying gcc-8.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying gcc-10-multiple_definitions.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2045764/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='6532a2d7b3ba4814bab3f3408954a1e8' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2045764' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_7AFu --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1 --logfile b1/build.log snap_2013-11-29-11.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink02-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2045764/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), help2man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20087 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 19.6 MB of archives. After unpacking 78.5 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 liblocale-gettext-perl arm64 1.07-7+b1 [15.2 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-8 [517 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 help2man arm64 1.49.3+b1 [198 kB] Fetched 19.6 MB in 0s (138 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20087 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_arm64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package help2man. Preparing to unpack .../30-help2man_1.49.3+b1_arm64.deb ... Unpacking help2man (1.49.3+b1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3+b1) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/snap-2013-11-29/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snap_2013-11-29-11_source.changes dpkg-buildpackage: info: source package snap dpkg-buildpackage: info: source version 2013-11-29-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' touch depend Zoe/depend dh_auto_clean make -j12 clean make[2]: Entering directory '/build/reproducible-path/snap-2013-11-29' rm -f *.o snap fathom forge hmm-info exonpairs cd Zoe; make clean make[3]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. rm -f *.o zoe-loop lexica seqedit seqstats twinkle make[3]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[2]: Leaving directory '/build/reproducible-path/snap-2013-11-29' if [ -f depend.orig ] ; then mv depend.orig depend; fi if [ -f Zoe/depend.orig ] ; then mv Zoe/depend.orig Zoe/depend; fi make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' dh_auto_build CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make -j12 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/snap-2013-11-29' make gcc make[3]: Entering directory '/build/reproducible-path/snap-2013-11-29' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd Zoe; make CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard"; make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make gcc CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[5]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make zoe-loop CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[6]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoe-loop.o zoe-loop.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeAlignment.o zoeAlignment.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeCDS.o zoeCDS.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeCounter.o zoeCounter.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDNA.o zoeDNA.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDistribution.o zoeDistribution.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDuration.o zoeDuration.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFastaFile.o zoeFastaFile.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeature.o zoeFeature.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeatureFactory.o zoeFeatureFactory.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeatureTable.o zoeFeatureTable.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeHMM.o zoeHMM.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeIsochore.o zoeIsochore.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeMath.o zoeMath.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeModel.o zoeModel.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoePhasePref.o zoePhasePref.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeProtein.o zoeProtein.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeScanner.o zoeScanner.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeState.o zoeState.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTools.o zoeTools.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTransition.o zoeTransition.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTrellis.o zoeTrellis.c cc -o zoe-loop -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 zoe-loop.o zoeAlignment.o zoeCDS.o zoeCounter.o zoeDNA.o zoeDistribution.o zoeDuration.o zoeFastaFile.o zoeFeature.o zoeFeatureFactory.o zoeFeatureTable.o zoeHMM.o zoeIsochore.o zoeMath.o zoeModel.o zoePhasePref.o zoeProtein.o zoeScanner.o zoeState.o zoeTools.o zoeTransition.o zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[6]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[5]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make snap CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o snap.o snap.c cc -o snap -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 snap.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make fathom CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o fathom.o fathom.c cc -o fathom -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 fathom.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make forge CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o forge.o forge.c cc -o forge -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 forge.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make hmm-info CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o hmm-info.o hmm-info.c cc -o hmm-info -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 hmm-info.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make exonpairs CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o exonpairs.o exonpairs.c cc -o exonpairs -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 exonpairs.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[3]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[2]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/snap/ debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' dh_install # cds-trainer.pl and noncoding-trainer.pl are needing the following Perl modules: # IK.pm, FAlite.pm, DataBrowser.pm # since these are not available in Debian there is no point in installing this script find debian -name cds-trainer.pl -delete find debian -name noncoding-trainer.pl -delete make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package snap: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package snap: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'snap' in '../snap_2013-11-29-11_arm64.deb'. dpkg-deb: building package 'snap-dbgsym' in '../snap-dbgsym_2013-11-29-11_arm64.deb'. dpkg-genbuildinfo --build=binary -O../snap_2013-11-29-11_arm64.buildinfo dpkg-genchanges --build=binary -O../snap_2013-11-29-11_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2045764 and its subdirectories I: Current time: Sat Nov 23 21:33:58 -12 2024 I: pbuilder-time-stamp: 1732440838 Sun Nov 24 09:34:00 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sun Nov 24 09:34:00 UTC 2024 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sun Nov 24 09:34:00 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Sun Nov 24 09:34:00 UTC 2024 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-7aApUa' ==================================================================================== Sat Dec 27 15:57:01 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "2 snap trixie /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9 2013-11-29-11" as arguments. Sat Dec 27 15:57:01 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-7uPECoZ9" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Dec 27 15:57:01 UTC 2025 I: Downloading source for trixie/snap=2013-11-29-11 Reading package lists... NOTICE: 'snap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap.git Please use: git clone https://salsa.debian.org/med-team/snap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 702 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (dsc) [2043 B] Get:2 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (tar) [689 kB] Get:3 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (diff) [10.9 kB] Fetched 702 kB in 0s (29.9 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'snap' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap.git Please use: git clone https://salsa.debian.org/med-team/snap.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 702 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (dsc) [2043 B] Get:2 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (tar) [689 kB] Get:3 http://deb.debian.org/debian trixie/main snap 2013-11-29-11 (diff) [10.9 kB] Fetched 702 kB in 0s (29.9 MB/s) Download complete and in download only mode ============================================================================= Re-Building snap in trixie on arm64 on codethink03-arm64 now. Date: Sat Dec 27 15:57:01 GMT 2025 Date UTC: Sat Dec 27 15:57:01 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9 + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_eP7T + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' snap = debian-installer -o snap = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' snap = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_eP7T --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2 --logfile b2/build.log snap_2013-11-29-11.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Dec 28 05:57:01 +14 2025 I: pbuilder-time-stamp: 1766851021 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [snap_2013-11-29-11.dsc] I: copying [./snap_2013-11-29.orig.tar.gz] I: copying [./snap_2013-11-29-11.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Jan 5 19:16:27 2021 gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./snap_2013-11-29-11.dsc: no acceptable signature found dpkg-source: info: extracting snap in snap-2013-11-29 dpkg-source: info: unpacking snap_2013-11-29.orig.tar.gz dpkg-source: info: unpacking snap_2013-11-29-11.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying unused-but-set-variable.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying build-with-gcc-6.patch dpkg-source: info: applying use-CC.patch dpkg-source: info: applying replace_itoa_with_broken_indentation.patch dpkg-source: info: applying fix_missing_braces_in_if_statements.patch dpkg-source: info: applying gcc-8.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying gcc-10-multiple_definitions.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 27 15:57 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=a6504291258b45bcbc40672089eb0d24 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3947466 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_eP7T --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2 --logfile b2/build.log snap_2013-11-29-11.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), help2man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20087 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 19.6 MB of archives. After unpacking 78.5 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 liblocale-gettext-perl arm64 1.07-7+b1 [15.2 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-8 [517 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 help2man arm64 1.49.3+b1 [198 kB] Fetched 19.6 MB in 0s (133 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20087 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_arm64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package help2man. Preparing to unpack .../30-help2man_1.49.3+b1_arm64.deb ... Unpacking help2man (1.49.3+b1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3+b1) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/snap-2013-11-29/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../snap_2013-11-29-11_source.changes dpkg-buildpackage: info: source package snap dpkg-buildpackage: info: source version 2013-11-29-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' touch depend Zoe/depend dh_auto_clean make -j12 clean make[2]: Entering directory '/build/reproducible-path/snap-2013-11-29' rm -f *.o snap fathom forge hmm-info exonpairs cd Zoe; make clean make[3]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. rm -f *.o zoe-loop lexica seqedit seqstats twinkle make[3]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[2]: Leaving directory '/build/reproducible-path/snap-2013-11-29' if [ -f depend.orig ] ; then mv depend.orig depend; fi if [ -f Zoe/depend.orig ] ; then mv Zoe/depend.orig Zoe/depend; fi make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' dh_auto_build CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make -j12 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/snap-2013-11-29' make gcc make[3]: Entering directory '/build/reproducible-path/snap-2013-11-29' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd Zoe; make CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard"; make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make gcc CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[5]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' make zoe-loop CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[6]: Entering directory '/build/reproducible-path/snap-2013-11-29/Zoe' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoe-loop.o zoe-loop.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeAlignment.o zoeAlignment.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeCDS.o zoeCDS.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeCounter.o zoeCounter.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDNA.o zoeDNA.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDistribution.o zoeDistribution.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeDuration.o zoeDuration.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFastaFile.o zoeFastaFile.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeature.o zoeFeature.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeatureFactory.o zoeFeatureFactory.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeFeatureTable.o zoeFeatureTable.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeHMM.o zoeHMM.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeIsochore.o zoeIsochore.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeMath.o zoeMath.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeModel.o zoeModel.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoePhasePref.o zoePhasePref.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeProtein.o zoeProtein.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeScanner.o zoeScanner.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeState.o zoeState.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTools.o zoeTools.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTransition.o zoeTransition.c cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c -o zoeTrellis.o zoeTrellis.c cc -o zoe-loop -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 zoe-loop.o zoeAlignment.o zoeCDS.o zoeCounter.o zoeDNA.o zoeDistribution.o zoeDuration.o zoeFastaFile.o zoeFeature.o zoeFeatureFactory.o zoeFeatureTable.o zoeHMM.o zoeIsochore.o zoeMath.o zoeModel.o zoePhasePref.o zoeProtein.o zoeScanner.o zoeState.o zoeTools.o zoeTransition.o zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[6]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[5]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29/Zoe' make snap CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o snap.o snap.c cc -o snap -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 snap.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make fathom CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o fathom.o fathom.c cc -o fathom -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 fathom.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make forge CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o forge.o forge.c cc -o forge -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 forge.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make hmm-info CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o hmm-info.o hmm-info.c cc -o hmm-info -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 hmm-info.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make exonpairs CFLAGS="-O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard" make[4]: Entering directory '/build/reproducible-path/snap-2013-11-29' cc -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -IZoe -c -o exonpairs.o exonpairs.c cc -o exonpairs -O2 -Wall -Werror -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/snap-2013-11-29=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 exonpairs.o Zoe/zoeAlignment.o Zoe/zoeCDS.o Zoe/zoeCounter.o Zoe/zoeDNA.o Zoe/zoeDistribution.o Zoe/zoeDuration.o Zoe/zoeFastaFile.o Zoe/zoeFeature.o Zoe/zoeFeatureFactory.o Zoe/zoeFeatureTable.o Zoe/zoeHMM.o Zoe/zoeIsochore.o Zoe/zoeMath.o Zoe/zoeModel.o Zoe/zoePhasePref.o Zoe/zoeProtein.o Zoe/zoeScanner.o Zoe/zoeState.o Zoe/zoeTools.o Zoe/zoeTransition.o Zoe/zoeTrellis.o -lm -Wl,-z,relro -Wl,-z,now make[4]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[3]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[2]: Leaving directory '/build/reproducible-path/snap-2013-11-29' make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/snap/ debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/snap-2013-11-29' dh_install # cds-trainer.pl and noncoding-trainer.pl are needing the following Perl modules: # IK.pm, FAlite.pm, DataBrowser.pm # since these are not available in Debian there is no point in installing this script find debian -name cds-trainer.pl -delete find debian -name noncoding-trainer.pl -delete make[1]: Leaving directory '/build/reproducible-path/snap-2013-11-29' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package snap: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package snap: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'snap' in '../snap_2013-11-29-11_arm64.deb'. dpkg-deb: building package 'snap-dbgsym' in '../snap-dbgsym_2013-11-29-11_arm64.deb'. dpkg-genbuildinfo --build=binary -O../snap_2013-11-29-11_arm64.buildinfo dpkg-genchanges --build=binary -O../snap_2013-11-29-11_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3947466 and its subdirectories I: Current time: Sun Dec 28 05:57:42 +14 2025 I: pbuilder-time-stamp: 1766851062 + false + set +x Sat Dec 27 15:57:42 UTC 2025 I: Signing ./b2/snap_2013-11-29-11_arm64.buildinfo as snap_2013-11-29-11_arm64.buildinfo.asc Sat Dec 27 15:57:42 UTC 2025 I: Signed ./b2/snap_2013-11-29-11_arm64.buildinfo as ./b2/snap_2013-11-29-11_arm64.buildinfo.asc Sat Dec 27 15:57:42 UTC 2025 - build #2 for snap/trixie/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Sat Dec 27 15:57:42 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-7uPECoZ9, removing. /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9: total 52 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 09:33 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 24 09:34 b2 -rw------- 1 jenkins jenkins 40072 Nov 24 09:34 rbuildlog.n0CWtmE -rw-r--r-- 1 jenkins jenkins 2043 Jan 5 2021 snap_2013-11-29-11.dsc /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1: total 1292 -rw-r--r-- 1 jenkins jenkins 36613 Nov 24 09:33 build.log -rw-r--r-- 1 jenkins jenkins 860252 Nov 24 09:33 snap-dbgsym_2013-11-29-11_arm64.deb -rw-r--r-- 1 jenkins jenkins 10888 Nov 24 09:33 snap_2013-11-29-11.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2043 Nov 24 09:33 snap_2013-11-29-11.dsc -rw-r--r-- 1 jenkins jenkins 5022 Nov 24 09:33 snap_2013-11-29-11_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5904 Nov 24 09:33 snap_2013-11-29-11_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1460 Nov 24 09:33 snap_2013-11-29-11_arm64.changes -rw-r--r-- 1 jenkins jenkins 372484 Nov 24 09:33 snap_2013-11-29-11_arm64.deb -rw-r--r-- 1 jenkins jenkins 1314 Nov 24 09:33 snap_2013-11-29-11_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2: total 1288 -rw-r--r-- 1 jenkins jenkins 38556 Nov 24 09:34 build.log -rw-r--r-- 1 jenkins jenkins 860252 Nov 24 09:34 snap-dbgsym_2013-11-29-11_arm64.deb -rw-r--r-- 1 jenkins jenkins 10888 Nov 24 09:34 snap_2013-11-29-11.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2043 Nov 24 09:34 snap_2013-11-29-11.dsc -rw-r--r-- 1 jenkins jenkins 5022 Nov 24 09:34 snap_2013-11-29-11_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 5904 Nov 24 09:34 snap_2013-11-29-11_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1460 Nov 24 09:34 snap_2013-11-29-11_arm64.changes -rw-r--r-- 1 jenkins jenkins 372484 Nov 24 09:34 snap_2013-11-29-11_arm64.deb -rw-r--r-- 1 jenkins jenkins 1314 Nov 24 09:34 snap_2013-11-29-11_source.changes Sun Nov 24 09:34:44 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sun Nov 24 09:34:45 UTC 2024 I: snap_2013-11-29-11_arm64.changes: Format: 1.8 Date: Tue, 22 Dec 2020 14:24:21 +0100 Source: snap Binary: snap snap-dbgsym Architecture: arm64 Version: 2013-11-29-11 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: snap - location of genes from DNA sequence with hidden markov model Changes: snap (2013-11-29-11) unstable; urgency=medium . * Fixing Lintian error due to malformed override * Setting Standards version to 4.5.1 (no changes needed) * Refreshing d/copyright Checksums-Sha1: 0046ed17031b4518bedd497452b987e1c16d12dc 860252 snap-dbgsym_2013-11-29-11_arm64.deb 36f4fe2a9a54f47d8096bc88b76f4beb41ca151f 5022 snap_2013-11-29-11_arm64.buildinfo 1502e201d377d1065163db16473d475acb4fefcd 372484 snap_2013-11-29-11_arm64.deb Checksums-Sha256: 550113934e7fd256508d069aef776e61ef8451f8a21944d7527332ad4b2da2e7 860252 snap-dbgsym_2013-11-29-11_arm64.deb d065609fc753696e5eb31b55d83ae8187641aeacae803ec2b867127df5f0b75e 5022 snap_2013-11-29-11_arm64.buildinfo 60067fa0aa1cb90851efdf110290925a6ce6d71030d0bd24c63fad28aa80f664 372484 snap_2013-11-29-11_arm64.deb Files: e55f0bd50905b070b87e73175f2a3d4e 860252 debug optional snap-dbgsym_2013-11-29-11_arm64.deb 2160a948ce7355788e45675234246fa6 5022 science optional snap_2013-11-29-11_arm64.buildinfo 19f6b59222958bb583cd55fae2bad3cf 372484 science optional snap_2013-11-29-11_arm64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/snap_2013-11-29-11.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/snap_2013-11-29-11.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/snap_2013-11-29-11.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/snap_2013-11-29-11.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/arm64/snap_2013-11-29-11_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/snap_2013-11-29-11.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-24 09:33:59.611110453 +0000 +++ b2/build.log 2024-11-24 09:34:44.685071606 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Nov 23 21:33:23 -12 2024 -I: pbuilder-time-stamp: 1732440803 +I: Current time: Sun Dec 28 05:57:01 +14 2025 +I: pbuilder-time-stamp: 1766851021 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -35,52 +35,84 @@ dpkg-source: info: applying gcc-10-multiple_definitions.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2045764/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 27 15:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='6532a2d7b3ba4814bab3f3408954a1e8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2045764' - PS1='# ' - PS2='> ' + INVOCATION_ID=a6504291258b45bcbc40672089eb0d24 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3947466 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_7AFu --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1 --logfile b1/build.log snap_2013-11-29-11.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/pbuilderrc_eP7T --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2 --logfile b2/build.log snap_2013-11-29-11.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink02-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2045764/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -149,7 +181,7 @@ Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 help2man arm64 1.49.3+b1 [198 kB] -Fetched 19.6 MB in 0s (138 MB/s) +Fetched 19.6 MB in 0s (133 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20087 files and directories currently installed.) @@ -288,7 +320,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/snap-2013-11-29/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snap_2013-11-29-11_source.changes +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/snap-2013-11-29/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../snap_2013-11-29-11_source.changes dpkg-buildpackage: info: source package snap dpkg-buildpackage: info: source version 2013-11-29-11 dpkg-buildpackage: info: source distribution unstable @@ -435,12 +471,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3947466/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2045764 and its subdirectories -I: Current time: Sat Nov 23 21:33:58 -12 2024 -I: pbuilder-time-stamp: 1732440838 +I: removing directory /srv/workspace/pbuilder/3947466 and its subdirectories +I: Current time: Sun Dec 28 05:57:42 +14 2025 +I: pbuilder-time-stamp: 1766851062 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/snap_2013-11-29-11.diff: 66.7% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/snap_2013-11-29-11.diff.gz b2/build.log: 82.1% -- replaced with stdout Compressing the 1st log... b1/build.log: 82.8% -- replaced with stdout Sun Nov 24 09:34:46 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_snap_trixie_arm64_1732440886 + touch /var/log/reproducible-builds/diffoscope_stamp_snap_trixie_arm64_1732440886 + RESULT=0 + systemd-run '--description=diffoscope on snap/2013-11-29-11 in trixie/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_19-46260 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9 --run-session -c jenkins-reproducible-trixie-diffoscope-476b1333-847c-42ae-9433-3ad58dc47d92 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/dbd-tmp-ENS1USD ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/snap_2013-11-29-11.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/snap_2013-11-29-11.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/snap_2013-11-29-11.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1/snap_2013-11-29-11_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2/snap_2013-11-29-11_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_19-46260.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/snap_2013-11-29-11.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/snap_2013-11-29-11.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/snap_2013-11-29-11.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b1/snap_2013-11-29-11_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.skU1iRW9/b2/snap_2013-11-29-11_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.433s) 0.433s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.032s) 0.032s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 824ms CPU time consumed: 820ms ___ _ __ __ _ _ __ / __| '_ \ / _` | '_ \ \__ \ | | | (_| | |_) | |___/_| |_|\__,_| .__/ |_| Sun Nov 24 09:34:48 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Sun Nov 24 09:34:48 UTC 2024 I: snap from trixie built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-24 09:34:48] INFO: Starting at 2024-11-24 09:34:48.695936 [2024-11-24 09:34:48] INFO: Generating the pages of 1 package(s) [2024-11-24 09:34:49] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/arm64/snap didn't produce a buildlog, even though it has been built. [2024-11-24 09:34:49] INFO: Finished at 2024-11-24 09:34:49.224928, took: 0:00:00.529001 Sun Nov 24 09:34:49 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/arm64/snap.html Sun Nov 24 09:34:49 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Nov 24 09:34:49 UTC 2024 I: Submitting 8.0K b1/snap_2013-11-29-11_arm64.buildinfo.asc https://buildinfo.debian.net/36f4fe2a9a54f47d8096bc88b76f4beb41ca151f/snap_2013-11-29-11_arm64 Sun Nov 24 09:34:50 UTC 2024 I: Submitting 8.0K b2/snap_2013-11-29-11_arm64.buildinfo.asc https://buildinfo.debian.net/17a79f4b166985dde14ac009ed5245a7c1cb7662/snap_2013-11-29-11_arm64 Sun Nov 24 09:34:50 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Nov 24 09:34:50 UTC 2024 I: Done submitting .buildinfo files. Sun Nov 24 09:34:50 UTC 2024 I: Removing signed snap_2013-11-29-11_arm64.buildinfo.asc files: removed './b1/snap_2013-11-29-11_arm64.buildinfo.asc' removed './b2/snap_2013-11-29-11_arm64.buildinfo.asc' 1732440890 arm64 trixie snap Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/snap_2013-11-29-11.rbuild.log: 78.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/arm64/snap_2013-11-29-11.rbuild.log.gz [2024-11-24 09:34:51] INFO: Starting at 2024-11-24 09:34:51.232679 [2024-11-24 09:34:51] INFO: Generating the pages of 1 package(s) [2024-11-24 09:34:51] INFO: Finished at 2024-11-24 09:34:51.692344, took: 0:00:00.459675 All cleanup done. Sun Nov 24 09:34:51 UTC 2024 - total duration: 0h 1m 35s. Sun Nov 24 09:34:51 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-SGgy7ILh, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1min 38.245s CPU time consumed: 7.953s