Running as unit: rb-build-arm64_3-108993.service ==================================================================================== Fri Aug 8 02:40:40 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_3) on jenkins, called using "codethink03-arm64 codethink04-arm64" as arguments. Fri Aug 8 02:40:40 UTC 2025 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-0iZEdMz3" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Aug 8 02:40:40 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Aug 8 02:40:40 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-faRo0A' Fri Aug 8 02:40:41 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Fri Aug 8 02:40:41 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-PCr0jb' ok, let's check if pynwb is building anywhere yet… ok, pynwb is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of pynwb in unstable on arm64 on jenkins now. 1st build will be done on codethink03-arm64.debian.net. 2nd build will be done on codethink04-arm64.debian.net. ============================================================================= Fri Aug 8 02:40:49 UTC 2025 I: starting to build pynwb/unstable/arm64 on jenkins on '2025-08-08 02:40' Fri Aug 8 02:40:49 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_3/108993/console.log 1754620849 arm64 unstable pynwb Fri Aug 8 02:40:49 UTC 2025 I: Downloading source for unstable/pynwb=2.8.2-2 --2025-08-08 02:40:49-- http://deb.debian.org/debian/pool/main/p/pynwb/pynwb_2.8.2-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2406 (2.3K) [text/prs.lines.tag] Saving to: ‘pynwb_2.8.2-2.dsc’ 0K .. 100% 289M=0s 2025-08-08 02:40:49 (289 MB/s) - ‘pynwb_2.8.2-2.dsc’ saved [2406/2406] --2025-08-08 02:40:49-- http://deb.debian.org/debian/pool/main/p/pynwb/pynwb_2.8.2-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2406 (2.3K) [text/prs.lines.tag] Saving to: ‘pynwb_2.8.2-2.dsc’ 0K .. 100% 289M=0s 2025-08-08 02:40:49 (289 MB/s) - ‘pynwb_2.8.2-2.dsc’ saved [2406/2406] Fri Aug 8 02:40:49 UTC 2025 I: pynwb_2.8.2-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pynwb Binary: python3-pynwb Architecture: all Version: 2.8.2-2 Maintainer: Debian Med Packaging Team Uploaders: Yaroslav Halchenko , Étienne Mollier Homepage: https://github.com/NeurodataWithoutBorders/pynwb Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/pynwb Vcs-Git: https://salsa.debian.org/med-team/pynwb.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all, python3-dateutil, python3-h5py (>= 2.10), python3-hatchling, python3-hatch-vcs, python3-hdmf (>= 3.9.0~), python3-numpy, python3-pandas, python3-requests, python3-setuptools, python3-pytest, python3-coverage Package-List: python3-pynwb deb python optional arch=all Checksums-Sha1: 9b3ed1830d68be974a8449de0152b4ba4906f47e 34771929 pynwb_2.8.2.orig.tar.gz b81e5baf948589c2df91a2534a33a900b73fa437 5040 pynwb_2.8.2-2.debian.tar.xz Checksums-Sha256: 53b70d02951803f908678ccbe3aa8851c5997589bf1718830bf6a45bc550a2d8 34771929 pynwb_2.8.2.orig.tar.gz cf18dc4f254f2460fdcfd52bcde241611bcff1b0a236fb50f681dabaa23248d7 5040 pynwb_2.8.2-2.debian.tar.xz Files: 8f71e60abdaad10654183e9539b6408d 34771929 pynwb_2.8.2.orig.tar.gz a8e02147faba72433b6b3c7b3858fed2 5040 pynwb_2.8.2-2.debian.tar.xz Dgit: 023e8344d7ac71c9604f2956437d18eb7407b5b6 debian archive/debian/2.8.2-2 https://git.dgit.debian.org/pynwb -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmcIJ0IUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrALA/+OBkX3umm4yEUjs1MpMq+QMsIuFVd pbzMSyryOTAS7HbiBe6843pWbPgVwaFjD3xweoblDZhV6iSCqps3u1Pn5jDdkwRf /yGprsNV+OibGVR+LrvbgTbk4yHR2TMI9way6qVHyKEjcQ24Ic8R0CAuU0dQssT6 9Ru7iPLqVpBL0952eIWrkeFqczWg0MErZ5azMld/ln1e9WGf6nCoeo+PSsrnD9jC GYdsQ6+GRMnYqPGz8GChZwW1WjxKL6RQbTWLGNtiDWiBWBeo8g2oqjzP6ShJ6RRA kd0bWOn6JQJB/yLHe94rZdxlhxyAo7jZvMYs+t5r7lgb/hIHqTvy7luZbmMOjGA9 5Y40WPqn4BjvvwJs3tzqIwMpQHNq+xkYflavCJ4iFCYqf9ji5vdBONHGnBhKGkRe EuZK4anf5eRumHtTpZSdpL/7bDIgZKOgdIpLJ4CS8nxM7CeluggAv+8tnr/3u9b0 mNHD9fctmiwyaoz8B1bqbRfk6cPwKsaLchKMHjmBPifw2gdw9JGHOvxm6mzLH1J9 3m1GXUbpnqwrvGhbSR137/wxBCyLvG4Slkmh42hVsqGG6QxUiuIgf9sjaNhiwcaJ 4V3GEev40fxI8Ya45e32K8aE9uFO3SfT3ALEb457yr/Ca7mxiUVubQdErv+t/RCw YTlNYUbAe7qhOFA= =7KGJ -----END PGP SIGNATURE----- Fri Aug 8 02:40:49 UTC 2025 I: Checking whether the package is not for us Fri Aug 8 02:40:49 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Fri Aug 8 02:40:49 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Fri Aug 8 02:40:49 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Aug 8 02:40:49 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-0s0ijq' ==================================================================================== Thu Sep 10 09:03:50 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "1 pynwb unstable /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP 2.8.2-2" as arguments. Thu Sep 10 09:03:50 UTC 2026 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-dA3yiRvS" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Sep 10 09:03:50 UTC 2026 I: Downloading source for unstable/pynwb=2.8.2-2 Reading package lists... NOTICE: 'pynwb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pynwb.git Please use: git clone https://salsa.debian.org/med-team/pynwb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 34.8 MB of source archives. Get:1 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (dsc) [2406 B] Get:2 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (tar) [34.8 MB] Get:3 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (diff) [5040 B] Fetched 34.8 MB in 1s (36.8 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'pynwb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pynwb.git Please use: git clone https://salsa.debian.org/med-team/pynwb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 34.8 MB of source archives. Get:1 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (dsc) [2406 B] Get:2 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (tar) [34.8 MB] Get:3 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (diff) [5040 B] Fetched 34.8 MB in 1s (36.8 MB/s) Download complete and in download only mode ============================================================================= Building pynwb in unstable on arm64 on codethink03-arm64 now. Date: Thu Sep 10 10:03:52 BST 2026 Date UTC: Thu Sep 10 09:03:52 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 9 21:03:52 -12 2026 I: pbuilder-time-stamp: 1789031032 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pynwb_2.8.2-2.dsc] I: copying [./pynwb_2.8.2.orig.tar.gz] I: copying [./pynwb_2.8.2-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pynwb_2.8.2-2.dsc: no acceptable signature found dpkg-source: info: extracting pynwb in pynwb-2.8.2 dpkg-source: info: unpacking pynwb_2.8.2.orig.tar.gz dpkg-source: info: unpacking pynwb_2.8.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-syntax-warnings.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/940374/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='daae91437832439c88b54194000e43ec' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='940374' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_xWp3 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1 --logfile b1/build.log pynwb_2.8.2-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/940374/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all, python3-dateutil, python3-h5py (>= 2.10), python3-hatchling, python3-hatch-vcs, python3-hdmf (>= 3.9.0~), python3-numpy, python3-pandas, python3-requests, python3-setuptools, python3-pytest, python3-coverage dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-dateutil; however: Package python3-dateutil is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 2.10); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-hatchling; however: Package python3-hatchling is not installed. pbuilder-satisfydepends-dummy depends on python3-hatch-vcs; however: Package python3-hatch-vcs is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmf (>= 3.9.0~); however: Package python3-hdmf is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-coverage; however: Package python3-coverage is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhdf5-310{a} libhdf5-hl-310{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap2{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-attr{a} python3-autocommand{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-coverage{a} python3-dateutil{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-hdmf{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pathspec{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytz{a} python3-referencing{a} python3-requests{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-trove-classifiers{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-wheel{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-fqdn python3-html5lib python3-isoduration python3-jinja2 python3-json-pointer python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-pooch python3-pygments python3-rfc3339-validator python3-rfc3986-validator python3-rfc3987 python3-tables python3-tz python3-uritemplate python3-webcolors python3-yaml wget 0 packages upgraded, 125 newly installed, 0 to remove and 0 not upgraded. Need to get 56.6 MB of archives. After unpacking 263 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.5-2 [856 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.5-2 [2003 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.5-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-4 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.4.8-2 [21.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.5-2 [1892 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.5-2 [757 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.5-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.5-1 [28.2 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1 [136 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-6 [104 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-19 [361 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-6 [1820 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.2.4+ds-1 [3604 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.5.1-1 [1457 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20250419 [162 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 43 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-2.1 [630 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250414 [116 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 58 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-2 [107 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1 [71.4 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.14.1-2 [359 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 74 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-3 [1155 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [66.1 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b3 [10.1 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 python3-build all 1.2.2-2 [36.1 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.5-1 [1044 B] Get: 84 http://deb.debian.org/debian unstable/main arm64 python3-attr all 25.3.0-1 [69.5 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 87 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer arm64 3.4.2-1 [120 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 python3-coverage arm64 7.8.2+dfsg1-1 [182 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.2.1-2 [33.0 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.13.0-1+b1 [953 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.13.0-1 [15.0 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 python3-trove-classifiers all 2025.4.28.22-1 [10.8 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 python3-hatchling all 1.27.0-1 [47.0 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.7.0-1 [67.4 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.13.2-1 [90.5 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 103 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.2.1-1 [41.2 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 110 http://deb.debian.org/debian unstable/main arm64 python3-rpds-py arm64 0.21.0-2+b1 [226 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 python3-referencing all 0.36.2-1 [23.7 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 113 http://deb.debian.org/debian unstable/main arm64 python3-jsonschema all 4.19.2-6 [71.4 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 python3-pytz all 2025.2-3 [152 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-9 [3877 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 python3-pandas all 2.2.3+dfsg-9 [3097 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.15.3-1 [14.9 MB] Get: 118 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml.clib arm64 0.2.12+ds-1+b1 [117 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml all 0.18.10+ds-1 [147 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 python3-hdmf all 3.14.5-1 [296 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.10-1 [42.0 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 123 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.5-2 [250 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.3.0-3 [115 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Fetched 56.6 MB in 0s (202 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.5-2_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.5-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.5-2_arm64.deb ... Unpacking python3.13-minimal (3.13.5-2) ... Setting up libpython3.13-minimal:arm64 (3.13.5-2) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.5-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20298 files and directories currently installed.) 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.5-2_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.5-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.5-2_arm64.deb ... Unpacking python3.13 (3.13.5-2) ... 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Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../032-libxml2_2.12.7+dfsg+really2.9.14-2.1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Selecting previously unselected package gettext. Preparing to unpack .../033-gettext_0.23.1-2_arm64.deb ... Unpacking gettext (0.23.1-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../034-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../035-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../036-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package dh-python. Preparing to unpack .../037-dh-python_6.20250414_all.deb ... 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Current default time zone: 'Etc/UTC' Local time is now: Thu Sep 10 09:04:15 UTC 2026. Universal Time is now: Thu Sep 10 09:04:15 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libblas3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up liblzf1:arm64 (3.6-4+b3) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-2) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:arm64 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:arm64 (1.8.0-1) ... Setting up libffi8:arm64 (3.4.8-2) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up netbase (6.5) ... Setting up libkrb5-3:arm64 (1.21.3-5) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up openssl (3.5.1-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Setting up libldap2:arm64 (2.6.10+dfsg-1) ... Setting up libsz2:arm64 (1.1.3-1+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libidn2-0:arm64 (2.3.8-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:arm64 (3.13.5-2) ... Setting up libpython3-stdlib:arm64 (3.13.5-1) ... Setting up libgnutls30t64:arm64 (3.8.9-3) ... Setting up python3.13 (3.13.5-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.5-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-decorator (5.2.1-2) ... Setting up python3-packaging (25.0-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up python3-idna (3.10-1) ... Setting up python3-typing-extensions (4.13.2-1) ... Setting up python3-numpy (1:2.2.4+ds-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.3.0-3) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-rpds-py (0.21.0-2+b1) ... Setting up python3-trove-classifiers (2025.4.28.22-1) ... Setting up python3-dateutil (2.9.0-4) ... Setting up python3-pathspec (0.12.1-1) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.7.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-attr (25.3.0-1) ... Setting up python3-scipy (1.15.3-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up libcurl4t64:arm64 (8.14.1-2) ... Setting up python3-charset-normalizer (3.4.2-1) ... Setting up python3-pytest (8.3.5-2) ... Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-9) ... Setting up python3-typeguard (4.4.2-1) ... Setting up python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ... Setting up python3-all (3.13.5-1) ... Setting up python3-coverage (7.8.2+dfsg1-1) ... Setting up debhelper (13.24.2) ... Setting up python3-pytz (2025.2-3) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pandas (2.2.3+dfsg-9) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-requests (2.32.3+dfsg-5) ... Setting up python3-ruamel.yaml (0.18.10+ds-1) ... Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... Setting up python3-hatchling (1.27.0-1) ... Setting up python3-build (1.2.2-2) ... Setting up python3-referencing (0.36.2-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... Setting up python3-setuptools (78.1.1-0.1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Setting up python3-h5py-serial (3.13.0-1+b1) ... Setting up python3-setuptools-scm (8.2.1-1) ... Setting up python3-h5py (3.13.0-1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up python3-jsonschema (4.19.2-6) ... Setting up python3-hdmf (3.14.5-1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pynwb-2.8.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pynwb_2.8.2-2_source.changes dpkg-buildpackage: info: source package pynwb dpkg-buildpackage: info: source version 2.8.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.13 rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-pynwb.substvars debian/files rm -fr -- debian/python3-pynwb/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.13 dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.13 I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb * Building wheel... Successfully built pynwb-2.8.2-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p 3.13 I: pybuild base:311: cd /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.5, pytest-8.3.5, pluggy-1.5.0 rootdir: /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb/build configfile: pyproject.toml plugins: typeguard-4.4.2 collected 631 items tests/back_compat/test_import_structure.py . [ 0%] tests/back_compat/test_read.py ........ [ 1%] tests/integration/hdf5/test_base.py ...... [ 2%] tests/integration/hdf5/test_behavior.py .. [ 2%] tests/integration/hdf5/test_device.py .. [ 3%] tests/integration/hdf5/test_ecephys.py ................... [ 6%] tests/integration/hdf5/test_extension.py .. [ 6%] tests/integration/hdf5/test_file_copy.py . [ 6%] tests/integration/hdf5/test_icephys.py .................... [ 9%] tests/integration/hdf5/test_image.py .... [ 10%] tests/integration/hdf5/test_io.py ............................ [ 14%] tests/integration/hdf5/test_misc.py ............ [ 16%] tests/integration/hdf5/test_modular_storage.py ..ss [ 17%] tests/integration/hdf5/test_nwbfile.py ................................. [ 22%] ........... [ 24%] tests/integration/hdf5/test_ogen.py .... [ 24%] tests/integration/hdf5/test_ophys.py .................... [ 28%] tests/integration/hdf5/test_scratch.py ....... [ 29%] tests/integration/ros3/test_ros3.py ssss [ 29%] tests/integration/utils/test_io_utils.py ...... [ 30%] tests/unit/test_base.py ................................................ [ 38%] .................. [ 41%] tests/unit/test_behavior.py .......... [ 42%] tests/unit/test_config.py ss [ 43%] tests/unit/test_core.py ........... [ 44%] tests/unit/test_core_NWBContainer.py .. [ 45%] tests/unit/test_device.py . [ 45%] tests/unit/test_ecephys.py ........................ [ 49%] tests/unit/test_epoch.py ....... [ 50%] tests/unit/test_epoch_legacy.py ... [ 50%] tests/unit/test_extension.py ........ [ 51%] tests/unit/test_file.py ................................................ [ 59%] ..... [ 60%] tests/unit/test_icephys.py .......................... [ 64%] tests/unit/test_icephys_metadata_tables.py ............................. [ 69%] ................. [ 71%] tests/unit/test_image.py ........................... [ 76%] tests/unit/test_misc.py .................... [ 79%] tests/unit/test_mock.py ................................................ [ 86%] ................. [ 89%] tests/unit/test_ogen.py . [ 89%] tests/unit/test_ophys.py ...................... [ 93%] tests/unit/test_resources.py . [ 93%] tests/unit/test_retinotopy.py . [ 93%] tests/unit/test_scratch.py ............... [ 95%] tests/unit/test_spec.py ... [ 96%] tests/validation/test_validate.py ....................... [100%] =============================== warnings summary =============================== tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip_export /usr/lib/python3/dist-packages/hdmf/build/objectmapper.py:871: IncorrectDatasetShapeBuildWarning: Shape of data does not match shape in spec 'ImageReferences' warnings.warn(msg, IncorrectDatasetShapeBuildWarning) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============ 623 passed, 8 skipped, 2 warnings in 243.83s (0:04:03) ============ rm -fr -- /tmp/dh-xdg-rundir-dCLwC0nT create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-pynwb.substvars rm -fr -- debian/.debhelper/generated/python3-pynwb/ debian/python3-pynwb/ debian/tmp/ dh_auto_install --destdir=debian/python3-pynwb/ -O--buildsystem=pybuild install -m0755 -d /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' find debian -name "test_*.nwb" -delete rm -f .coverage.* # Remove duplicate directory. rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/format.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png' removed 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'/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/index.rst' removed 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'/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/README.rst removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/README.rst' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/requirements-doc.txt' rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_experimental_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb cd './src/pynwb/nwb-schema//..' && find 'nwb-schema' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb chmod -R u\+rw,go=rX debian/python3-pynwb/usr/share/doc install -p -m0644 debian/copyright debian/python3-pynwb/usr/share/doc/python3-pynwb/copyright debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' # Remove extra license files rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -p -m0644 debian/.debhelper/generated/python3-pynwb/dh_installchangelogs.dch.trimmed debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog.Debian install -p -m0644 ./CHANGELOG.md debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20250414 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13) D: dh_python3 debhelper:174: source=pynwb, binary packages=['python3-pynwb'] D: dh_python3 dh_python3:205: processing package python3-pynwb... D: dh_python3 fs:50: moving files from debian/python3-pynwb/usr/lib/python3.13/dist-packages to debian/python3-pynwb/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1026241.XlWMcCux D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1025344.XCfyqdox D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1024488.XwmOFYfx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1023946.XsBItryx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1023292.XtozAVlx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1022236.XJSOyHIx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1021470.XMpKLDsx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1019199.XTsioQJx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1018271.XjjWRMAx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1017363.XajSzILx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1016586.XAvWkIxx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1015612.XYsuZuhx D: dh_python3 fs:179: Writing INSTALLER in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:190: Deleting RECORD in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:338: package python3-pynwb details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': {'debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info/METADATA'}, 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-pynwb D: dh_python3 pydist:175: trying to find dependency for h5py>=2.10 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:255: dependency: constructed version D: dh_python3 pydist:175: trying to find dependency for hdmf>=3.14.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for numpy>=1.18 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pandas>=1.1.5 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for python-dateutil>=2.7.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-dateutil', 'python3:any', 'python3-hdmf (>= 3.9.0~)', 'python3-h5py (>= 2.10)', 'python3-numpy', 'python3-pandas'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1728585089 as canonical time Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-pynwb chmod a-x usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json gzip -9nf usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json cd '/build/reproducible-path/pynwb-2.8.2' dh_fixperms -O--buildsystem=pybuild find debian/python3-pynwb ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-pynwb/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-pynwb/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-pynwb -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/postinst cat debian/python3-pynwb.postinst.debhelper >> debian/python3-pynwb/DEBIAN/postinst chmod 0755 -- debian/python3-pynwb/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/prerm cat debian/python3-pynwb.prerm.debhelper >> debian/python3-pynwb/DEBIAN/prerm chmod 0755 -- debian/python3-pynwb/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN echo misc:Depends= >> debian/python3-pynwb.substvars echo misc:Pre-Depends= >> debian/python3-pynwb.substvars dpkg-gencontrol -ppython3-pynwb -ldebian/changelog -Tdebian/python3-pynwb.substvars -cdebian/control -Pdebian/python3-pynwb chmod 0644 -- debian/python3-pynwb/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN cd debian/python3-pynwb >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-pynwb/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-pynwb .. dpkg-deb: building package 'python3-pynwb' in '../python3-pynwb_2.8.2-2_all.deb'. dpkg-genbuildinfo --build=binary -O../pynwb_2.8.2-2_arm64.buildinfo dpkg-genchanges --build=binary -O../pynwb_2.8.2-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/940374 and its subdirectories I: Current time: Wed Sep 9 21:09:05 -12 2026 I: pbuilder-time-stamp: 1789031345 Thu Sep 10 09:09:05 UTC 2026 I: Signing ./b1/pynwb_2.8.2-2_arm64.buildinfo as pynwb_2.8.2-2_arm64.buildinfo.asc Thu Sep 10 09:09:05 UTC 2026 I: Signed ./b1/pynwb_2.8.2-2_arm64.buildinfo as ./b1/pynwb_2.8.2-2_arm64.buildinfo.asc Thu Sep 10 09:09:05 UTC 2026 - build #1 for pynwb/unstable/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Thu Sep 10 09:09:05 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-dA3yiRvS, removing. /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Aug 8 02:46 b1 drwxr-xr-x 2 jenkins jenkins 4096 Aug 8 02:40 b2 -rw-r--r-- 1 jenkins jenkins 2406 Oct 10 2024 pynwb_2.8.2-2.dsc -rw------- 1 jenkins jenkins 3502 Aug 8 02:40 rbuildlog.mimwfCx /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1: total 1456 -rw-r--r-- 1 jenkins jenkins 88194 Aug 8 02:46 build.log -rw-r--r-- 1 jenkins jenkins 5040 Aug 8 02:46 pynwb_2.8.2-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2406 Aug 8 02:46 pynwb_2.8.2-2.dsc -rw-r--r-- 1 jenkins jenkins 7720 Aug 8 02:46 pynwb_2.8.2-2_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 8602 Aug 8 02:46 pynwb_2.8.2-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1173 Aug 8 02:46 pynwb_2.8.2-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1276 Aug 8 02:46 pynwb_2.8.2-2_source.changes -rw-r--r-- 1 jenkins jenkins 1356372 Aug 8 02:46 python3-pynwb_2.8.2-2_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2: total 0 Fri Aug 8 02:46:07 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 9 21:03:52 -12 2026 I: pbuilder-time-stamp: 1789031032 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pynwb_2.8.2-2.dsc] I: copying [./pynwb_2.8.2.orig.tar.gz] I: copying [./pynwb_2.8.2-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pynwb_2.8.2-2.dsc: no acceptable signature found dpkg-source: info: extracting pynwb in pynwb-2.8.2 dpkg-source: info: unpacking pynwb_2.8.2.orig.tar.gz dpkg-source: info: unpacking pynwb_2.8.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-syntax-warnings.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/940374/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='daae91437832439c88b54194000e43ec' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='940374' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_xWp3 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1 --logfile b1/build.log pynwb_2.8.2-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/940374/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all, python3-dateutil, python3-h5py (>= 2.10), python3-hatchling, python3-hatch-vcs, python3-hdmf (>= 3.9.0~), python3-numpy, python3-pandas, python3-requests, python3-setuptools, python3-pytest, python3-coverage dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-dateutil; however: Package python3-dateutil is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 2.10); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-hatchling; however: Package python3-hatchling is not installed. pbuilder-satisfydepends-dummy depends on python3-hatch-vcs; however: Package python3-hatch-vcs is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmf (>= 3.9.0~); however: Package python3-hdmf is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-coverage; however: Package python3-coverage is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhdf5-310{a} libhdf5-hl-310{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap2{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-attr{a} python3-autocommand{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-coverage{a} python3-dateutil{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-hdmf{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pathspec{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytz{a} python3-referencing{a} python3-requests{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-trove-classifiers{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-wheel{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-fqdn python3-html5lib python3-isoduration python3-jinja2 python3-json-pointer python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-pooch python3-pygments python3-rfc3339-validator python3-rfc3986-validator python3-rfc3987 python3-tables python3-tz python3-uritemplate python3-webcolors python3-yaml wget 0 packages upgraded, 125 newly installed, 0 to remove and 0 not upgraded. Need to get 56.6 MB of archives. After unpacking 263 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.5-2 [856 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.5-2 [2003 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.5-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-4 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.4.8-2 [21.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.5-2 [1892 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.5-2 [757 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.5-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.5-1 [28.2 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1 [136 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-6 [104 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-19 [361 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-6 [1820 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.2.4+ds-1 [3604 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.5.1-1 [1457 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20250419 [162 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 43 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-2.1 [630 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250414 [116 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 58 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-2 [107 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1 [71.4 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.14.1-2 [359 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 74 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-3 [1155 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [66.1 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b3 [10.1 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 python3-build all 1.2.2-2 [36.1 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.5-1 [1044 B] Get: 84 http://deb.debian.org/debian unstable/main arm64 python3-attr all 25.3.0-1 [69.5 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 87 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer arm64 3.4.2-1 [120 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 python3-coverage arm64 7.8.2+dfsg1-1 [182 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.2.1-2 [33.0 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.13.0-1+b1 [953 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.13.0-1 [15.0 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 python3-trove-classifiers all 2025.4.28.22-1 [10.8 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 python3-hatchling all 1.27.0-1 [47.0 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.7.0-1 [67.4 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.13.2-1 [90.5 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 103 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.2.1-1 [41.2 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 110 http://deb.debian.org/debian unstable/main arm64 python3-rpds-py arm64 0.21.0-2+b1 [226 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 python3-referencing all 0.36.2-1 [23.7 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 113 http://deb.debian.org/debian unstable/main arm64 python3-jsonschema all 4.19.2-6 [71.4 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 python3-pytz all 2025.2-3 [152 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-9 [3877 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 python3-pandas all 2.2.3+dfsg-9 [3097 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.15.3-1 [14.9 MB] Get: 118 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml.clib arm64 0.2.12+ds-1+b1 [117 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml all 0.18.10+ds-1 [147 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 python3-hdmf all 3.14.5-1 [296 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.10-1 [42.0 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 123 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.5-2 [250 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.3.0-3 [115 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Fetched 56.6 MB in 0s (202 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.5-2_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.5-2) ... 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.5-2_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.5-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.5-2_arm64.deb ... Unpacking python3.13 (3.13.5-2) ... 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Current default time zone: 'Etc/UTC' Local time is now: Thu Sep 10 09:04:15 UTC 2026. Universal Time is now: Thu Sep 10 09:04:15 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libblas3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up liblzf1:arm64 (3.6-4+b3) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-2) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:arm64 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:arm64 (1.8.0-1) ... Setting up libffi8:arm64 (3.4.8-2) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... 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Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:arm64 (3.13.5-2) ... Setting up libpython3-stdlib:arm64 (3.13.5-1) ... Setting up libgnutls30t64:arm64 (3.8.9-3) ... Setting up python3.13 (3.13.5-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.5-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-decorator (5.2.1-2) ... Setting up python3-packaging (25.0-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... 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Setting up python3-pytest (8.3.5-2) ... Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-9) ... Setting up python3-typeguard (4.4.2-1) ... Setting up python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ... Setting up python3-all (3.13.5-1) ... Setting up python3-coverage (7.8.2+dfsg1-1) ... Setting up debhelper (13.24.2) ... Setting up python3-pytz (2025.2-3) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pandas (2.2.3+dfsg-9) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-requests (2.32.3+dfsg-5) ... Setting up python3-ruamel.yaml (0.18.10+ds-1) ... Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... Setting up python3-hatchling (1.27.0-1) ... Setting up python3-build (1.2.2-2) ... Setting up python3-referencing (0.36.2-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... Setting up python3-setuptools (78.1.1-0.1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Setting up python3-h5py-serial (3.13.0-1+b1) ... Setting up python3-setuptools-scm (8.2.1-1) ... Setting up python3-h5py (3.13.0-1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up python3-jsonschema (4.19.2-6) ... Setting up python3-hdmf (3.14.5-1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pynwb-2.8.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pynwb_2.8.2-2_source.changes dpkg-buildpackage: info: source package pynwb dpkg-buildpackage: info: source version 2.8.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.13 rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-pynwb.substvars debian/files rm -fr -- debian/python3-pynwb/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.13 dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.13 I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb * Building wheel... Successfully built pynwb-2.8.2-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p 3.13 I: pybuild base:311: cd /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.5, pytest-8.3.5, pluggy-1.5.0 rootdir: /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb/build configfile: pyproject.toml plugins: typeguard-4.4.2 collected 631 items tests/back_compat/test_import_structure.py . [ 0%] tests/back_compat/test_read.py ........ [ 1%] tests/integration/hdf5/test_base.py ...... [ 2%] tests/integration/hdf5/test_behavior.py .. [ 2%] tests/integration/hdf5/test_device.py .. [ 3%] tests/integration/hdf5/test_ecephys.py ................... [ 6%] tests/integration/hdf5/test_extension.py .. [ 6%] tests/integration/hdf5/test_file_copy.py . [ 6%] tests/integration/hdf5/test_icephys.py .................... [ 9%] tests/integration/hdf5/test_image.py .... [ 10%] tests/integration/hdf5/test_io.py ............................ [ 14%] tests/integration/hdf5/test_misc.py ............ [ 16%] tests/integration/hdf5/test_modular_storage.py ..ss [ 17%] tests/integration/hdf5/test_nwbfile.py ................................. [ 22%] ........... [ 24%] tests/integration/hdf5/test_ogen.py .... [ 24%] tests/integration/hdf5/test_ophys.py .................... [ 28%] tests/integration/hdf5/test_scratch.py ....... [ 29%] tests/integration/ros3/test_ros3.py ssss [ 29%] tests/integration/utils/test_io_utils.py ...... [ 30%] tests/unit/test_base.py ................................................ [ 38%] .................. [ 41%] tests/unit/test_behavior.py .......... [ 42%] tests/unit/test_config.py ss [ 43%] tests/unit/test_core.py ........... [ 44%] tests/unit/test_core_NWBContainer.py .. [ 45%] tests/unit/test_device.py . [ 45%] tests/unit/test_ecephys.py ........................ [ 49%] tests/unit/test_epoch.py ....... [ 50%] tests/unit/test_epoch_legacy.py ... [ 50%] tests/unit/test_extension.py ........ [ 51%] tests/unit/test_file.py ................................................ [ 59%] ..... [ 60%] tests/unit/test_icephys.py .......................... [ 64%] tests/unit/test_icephys_metadata_tables.py ............................. [ 69%] ................. [ 71%] tests/unit/test_image.py ........................... [ 76%] tests/unit/test_misc.py .................... [ 79%] tests/unit/test_mock.py ................................................ [ 86%] ................. [ 89%] tests/unit/test_ogen.py . [ 89%] tests/unit/test_ophys.py ...................... [ 93%] tests/unit/test_resources.py . [ 93%] tests/unit/test_retinotopy.py . [ 93%] tests/unit/test_scratch.py ............... [ 95%] tests/unit/test_spec.py ... [ 96%] tests/validation/test_validate.py ....................... [100%] =============================== warnings summary =============================== tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip_export /usr/lib/python3/dist-packages/hdmf/build/objectmapper.py:871: IncorrectDatasetShapeBuildWarning: Shape of data does not match shape in spec 'ImageReferences' warnings.warn(msg, IncorrectDatasetShapeBuildWarning) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============ 623 passed, 8 skipped, 2 warnings in 243.83s (0:04:03) ============ rm -fr -- /tmp/dh-xdg-rundir-dCLwC0nT create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-pynwb.substvars rm -fr -- debian/.debhelper/generated/python3-pynwb/ debian/python3-pynwb/ debian/tmp/ dh_auto_install --destdir=debian/python3-pynwb/ -O--buildsystem=pybuild install -m0755 -d /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' find debian -name "test_*.nwb" -delete rm -f .coverage.* # Remove duplicate directory. rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/format.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_table.pptx' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source/figures' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/source' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/_static' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/README.rst removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/README.rst' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/requirements-doc.txt' rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_experimental_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb cd './src/pynwb/nwb-schema//..' && find 'nwb-schema' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb chmod -R u\+rw,go=rX debian/python3-pynwb/usr/share/doc install -p -m0644 debian/copyright debian/python3-pynwb/usr/share/doc/python3-pynwb/copyright debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' # Remove extra license files rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -p -m0644 debian/.debhelper/generated/python3-pynwb/dh_installchangelogs.dch.trimmed debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog.Debian install -p -m0644 ./CHANGELOG.md debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20250414 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13) D: dh_python3 debhelper:174: source=pynwb, binary packages=['python3-pynwb'] D: dh_python3 dh_python3:205: processing package python3-pynwb... D: dh_python3 fs:50: moving files from debian/python3-pynwb/usr/lib/python3.13/dist-packages to debian/python3-pynwb/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1026241.XlWMcCux D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1025344.XCfyqdox D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1024488.XwmOFYfx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1023946.XsBItryx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1023292.XtozAVlx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1022236.XJSOyHIx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1021470.XMpKLDsx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1019199.XTsioQJx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1018271.XjjWRMAx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1017363.XajSzILx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1016586.XAvWkIxx D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1015612.XYsuZuhx D: dh_python3 fs:179: Writing INSTALLER in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:190: Deleting RECORD in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:338: package python3-pynwb details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': {'debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info/METADATA'}, 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-pynwb D: dh_python3 pydist:175: trying to find dependency for h5py>=2.10 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:255: dependency: constructed version D: dh_python3 pydist:175: trying to find dependency for hdmf>=3.14.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for numpy>=1.18 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pandas>=1.1.5 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for python-dateutil>=2.7.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-dateutil', 'python3:any', 'python3-hdmf (>= 3.9.0~)', 'python3-h5py (>= 2.10)', 'python3-numpy', 'python3-pandas'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1728585089 as canonical time Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-pynwb chmod a-x usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json gzip -9nf usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json cd '/build/reproducible-path/pynwb-2.8.2' dh_fixperms -O--buildsystem=pybuild find debian/python3-pynwb ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-pynwb/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-pynwb/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-pynwb -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/postinst cat debian/python3-pynwb.postinst.debhelper >> debian/python3-pynwb/DEBIAN/postinst chmod 0755 -- debian/python3-pynwb/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/prerm cat debian/python3-pynwb.prerm.debhelper >> debian/python3-pynwb/DEBIAN/prerm chmod 0755 -- debian/python3-pynwb/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN echo misc:Depends= >> debian/python3-pynwb.substvars echo misc:Pre-Depends= >> debian/python3-pynwb.substvars dpkg-gencontrol -ppython3-pynwb -ldebian/changelog -Tdebian/python3-pynwb.substvars -cdebian/control -Pdebian/python3-pynwb chmod 0644 -- debian/python3-pynwb/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN cd debian/python3-pynwb >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-pynwb/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-pynwb .. dpkg-deb: building package 'python3-pynwb' in '../python3-pynwb_2.8.2-2_all.deb'. dpkg-genbuildinfo --build=binary -O../pynwb_2.8.2-2_arm64.buildinfo dpkg-genchanges --build=binary -O../pynwb_2.8.2-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/940374 and its subdirectories I: Current time: Wed Sep 9 21:09:05 -12 2026 I: pbuilder-time-stamp: 1789031345 Fri Aug 8 02:46:07 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Fri Aug 8 02:46:07 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Fri Aug 8 02:46:07 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Fri Aug 8 02:46:07 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-7vElJp' ==================================================================================== Fri Aug 8 02:46:09 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink04-arm64, called using "2 pynwb unstable /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP 2.8.2-2" as arguments. Fri Aug 8 02:46:09 UTC 2025 - actually running "reproducible_build.sh" (md5sum 44ec6a3142940d5e9a7ab76543d96029) as "/tmp/jenkins-script-WEWTgKvp" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Aug 8 02:46:09 UTC 2025 I: Downloading source for unstable/pynwb=2.8.2-2 Reading package lists... NOTICE: 'pynwb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pynwb.git Please use: git clone https://salsa.debian.org/med-team/pynwb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 34.8 MB of source archives. Get:1 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (dsc) [2406 B] Get:2 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (tar) [34.8 MB] Get:3 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (diff) [5040 B] Fetched 34.8 MB in 0s (155 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'pynwb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/pynwb.git Please use: git clone https://salsa.debian.org/med-team/pynwb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 34.8 MB of source archives. Get:1 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (dsc) [2406 B] Get:2 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (tar) [34.8 MB] Get:3 http://deb.debian.org/debian unstable/main pynwb 2.8.2-2 (diff) [5040 B] Fetched 34.8 MB in 0s (155 MB/s) Download complete and in download only mode ============================================================================= Re-Building pynwb in unstable on arm64 on codethink04-arm64 now. Date: Fri Aug 8 03:46:09 BST 2025 Date UTC: Fri Aug 8 02:46:09 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_K9nd + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' pynwb = debian-installer -o pynwb = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' pynwb = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_K9nd --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2 --logfile b2/build.log pynwb_2.8.2-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Aug 8 16:46:09 +14 2025 I: pbuilder-time-stamp: 1754621169 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pynwb_2.8.2-2.dsc] I: copying [./pynwb_2.8.2.orig.tar.gz] I: copying [./pynwb_2.8.2-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./pynwb_2.8.2-2.dsc: no acceptable signature found dpkg-source: info: extracting pynwb in pynwb-2.8.2 dpkg-source: info: unpacking pynwb_2.8.2.orig.tar.gz dpkg-source: info: unpacking pynwb_2.8.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-syntax-warnings.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D01_modify_environment starting debug: Running on codethink04-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Aug 8 02:46 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=78934810bff74b29acb44beb196c34d3 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3948603 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_K9nd --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2 --logfile b2/build.log pynwb_2.8.2-2.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all, python3-dateutil, python3-h5py (>= 2.10), python3-hatchling, python3-hatch-vcs, python3-hdmf (>= 3.9.0~), python3-numpy, python3-pandas, python3-requests, python3-setuptools, python3-pytest, python3-coverage dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-dateutil; however: Package python3-dateutil is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 2.10); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-hatchling; however: Package python3-hatchling is not installed. pbuilder-satisfydepends-dummy depends on python3-hatch-vcs; however: Package python3-hatch-vcs is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmf (>= 3.9.0~); however: Package python3-hdmf is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-coverage; however: Package python3-coverage is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhdf5-310{a} libhdf5-hl-310{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap2{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-attr{a} python3-autocommand{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-coverage{a} python3-dateutil{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-hdmf{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pathspec{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytz{a} python3-referencing{a} python3-requests{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-trove-classifiers{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-wheel{a} python3-zipp{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-fqdn python3-html5lib python3-isoduration python3-jinja2 python3-json-pointer python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-pooch python3-pygments python3-rfc3339-validator python3-rfc3986-validator python3-rfc3987 python3-tables python3-tz python3-uritemplate python3-webcolors python3-yaml wget 0 packages upgraded, 125 newly installed, 0 to remove and 0 not upgraded. Need to get 56.6 MB of archives. After unpacking 263 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.5-2 [856 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.5-2 [2003 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.5-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-4 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.4.8-2 [21.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.5-2 [1892 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.5-2 [757 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.5-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.5-1 [28.2 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1 [136 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-6 [104 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-19 [361 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-6 [1820 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.2.4+ds-1 [3604 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.25 [25.0 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.5.1-1 [1457 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20250419 [162 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41-5 [93.8 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-8 [285 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-4 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 43 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-2.1 [630 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2 [1611 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.24.2 [919 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250414 [116 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 58 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-2 [107 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1 [71.4 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.14.1-2 [359 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 74 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-3 [1155 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-3 [66.1 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b3 [10.1 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 python3-build all 1.2.2-2 [36.1 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.5-1 [1044 B] Get: 84 http://deb.debian.org/debian unstable/main arm64 python3-attr all 25.3.0-1 [69.5 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 87 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer arm64 3.4.2-1 [120 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 python3-coverage arm64 7.8.2+dfsg1-1 [182 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.2.1-2 [33.0 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.13.0-1+b1 [953 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.13.0-1 [15.0 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 python3-trove-classifiers all 2025.4.28.22-1 [10.8 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 python3-hatchling all 1.27.0-1 [47.0 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.7.0-1 [67.4 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.13.2-1 [90.5 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.2-1 [37.3 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 103 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.2.1-1 [41.2 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 110 http://deb.debian.org/debian unstable/main arm64 python3-rpds-py arm64 0.21.0-2+b1 [226 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 python3-referencing all 0.36.2-1 [23.7 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 113 http://deb.debian.org/debian unstable/main arm64 python3-jsonschema all 4.19.2-6 [71.4 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 python3-pytz all 2025.2-3 [152 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 python3-pandas-lib arm64 2.2.3+dfsg-9 [3877 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 python3-pandas all 2.2.3+dfsg-9 [3097 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.15.3-1 [14.9 MB] Get: 118 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml.clib arm64 0.2.12+ds-1+b1 [117 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 python3-ruamel.yaml all 0.18.10+ds-1 [147 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 python3-hdmf all 3.14.5-1 [296 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.10-1 [42.0 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 123 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.5-2 [250 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.3.0-3 [115 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Fetched 56.6 MB in 0s (216 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.5-2_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.5-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.5-2_arm64.deb ... Unpacking python3.13-minimal (3.13.5-2) ... Setting up libpython3.13-minimal:arm64 (3.13.5-2) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.5-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20298 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.5-1_arm64.deb ... Unpacking python3-minimal (3.13.5-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-4_all.deb ... Unpacking tzdata (2025b-4) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.4.8-2_arm64.deb ... Unpacking libffi8:arm64 (3.4.8-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.2-6_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.5-2_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.5-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.5-2_arm64.deb ... Unpacking python3.13 (3.13.5-2) ... 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Current default time zone: 'Etc/UTC' Local time is now: Fri Aug 8 02:46:33 UTC 2025. Universal Time is now: Fri Aug 8 02:46:33 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libblas3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up liblzf1:arm64 (3.6-4+b3) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-2) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:arm64 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:arm64 (1.8.0-1) ... Setting up libffi8:arm64 (3.4.8-2) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up netbase (6.5) ... Setting up libkrb5-3:arm64 (1.21.3-5) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up openssl (3.5.1-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-2.1) ... Setting up libldap2:arm64 (2.6.10+dfsg-1) ... Setting up libsz2:arm64 (1.1.3-1+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:arm64 (3.12.1-6) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-2) ... Setting up libtool (2.5.4-4) ... Setting up libidn2-0:arm64 (2.3.8-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:arm64 (3.13.5-2) ... Setting up libpython3-stdlib:arm64 (3.13.5-1) ... Setting up libgnutls30t64:arm64 (3.8.9-3) ... Setting up python3.13 (3.13.5-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.5-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-decorator (5.2.1-2) ... Setting up python3-packaging (25.0-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up python3-idna (3.10-1) ... Setting up python3-typing-extensions (4.13.2-1) ... Setting up python3-numpy (1:2.2.4+ds-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.3.0-3) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-rpds-py (0.21.0-2+b1) ... Setting up python3-trove-classifiers (2025.4.28.22-1) ... Setting up python3-dateutil (2.9.0-4) ... Setting up python3-pathspec (0.12.1-1) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.7.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-attr (25.3.0-1) ... Setting up python3-scipy (1.15.3-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up libcurl4t64:arm64 (8.14.1-2) ... Setting up python3-charset-normalizer (3.4.2-1) ... Setting up python3-pytest (8.3.5-2) ... Setting up python3-pandas-lib:arm64 (2.2.3+dfsg-9) ... Setting up python3-typeguard (4.4.2-1) ... Setting up python3-ruamel.yaml.clib (0.2.12+ds-1+b1) ... Setting up python3-all (3.13.5-1) ... Setting up python3-coverage (7.8.2+dfsg1-1) ... Setting up debhelper (13.24.2) ... Setting up python3-pytz (2025.2-3) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pandas (2.2.3+dfsg-9) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-requests (2.32.3+dfsg-5) ... Setting up python3-ruamel.yaml (0.18.10+ds-1) ... Setting up libhdf5-310:arm64 (1.14.5+repack-3) ... Setting up python3-hatchling (1.27.0-1) ... Setting up python3-build (1.2.2-2) ... Setting up python3-referencing (0.36.2-1) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up libhdf5-hl-310:arm64 (1.14.5+repack-3) ... Setting up python3-setuptools (78.1.1-0.1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Setting up python3-h5py-serial (3.13.0-1+b1) ... Setting up python3-setuptools-scm (8.2.1-1) ... Setting up python3-h5py (3.13.0-1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up python3-jsonschema (4.19.2-6) ... Setting up python3-hdmf (3.14.5-1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/pynwb-2.8.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pynwb_2.8.2-2_source.changes dpkg-buildpackage: info: source package pynwb dpkg-buildpackage: info: source version 2.8.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.13 rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-pynwb.substvars debian/files rm -fr -- debian/python3-pynwb/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.13 dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.13 I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb * Building wheel... Successfully built pynwb-2.8.2-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p 3.13 I: pybuild base:311: cd /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.5, pytest-8.3.5, pluggy-1.5.0 rootdir: /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.13_pynwb/build configfile: pyproject.toml plugins: typeguard-4.4.2 collected 631 items tests/back_compat/test_import_structure.py . [ 0%] tests/back_compat/test_read.py ........ [ 1%] tests/integration/hdf5/test_base.py ...... [ 2%] tests/integration/hdf5/test_behavior.py .. [ 2%] tests/integration/hdf5/test_device.py .. [ 3%] tests/integration/hdf5/test_ecephys.py ................... [ 6%] tests/integration/hdf5/test_extension.py .. [ 6%] tests/integration/hdf5/test_file_copy.py . [ 6%] tests/integration/hdf5/test_icephys.py .................... [ 9%] tests/integration/hdf5/test_image.py .... [ 10%] tests/integration/hdf5/test_io.py ............................ [ 14%] tests/integration/hdf5/test_misc.py ............ [ 16%] tests/integration/hdf5/test_modular_storage.py ..ss [ 17%] tests/integration/hdf5/test_nwbfile.py ................................. [ 22%] ........... [ 24%] tests/integration/hdf5/test_ogen.py .... [ 24%] tests/integration/hdf5/test_ophys.py .................... [ 28%] tests/integration/hdf5/test_scratch.py ....... [ 29%] tests/integration/ros3/test_ros3.py ssss [ 29%] tests/integration/utils/test_io_utils.py ...... [ 30%] tests/unit/test_base.py ................................................ [ 38%] .................. [ 41%] tests/unit/test_behavior.py .......... [ 42%] tests/unit/test_config.py ss [ 43%] tests/unit/test_core.py ........... [ 44%] tests/unit/test_core_NWBContainer.py .. [ 45%] tests/unit/test_device.py . [ 45%] tests/unit/test_ecephys.py ........................ [ 49%] tests/unit/test_epoch.py ....... [ 50%] tests/unit/test_epoch_legacy.py ... [ 50%] tests/unit/test_extension.py ........ [ 51%] tests/unit/test_file.py ................................................ [ 59%] ..... [ 60%] tests/unit/test_icephys.py .......................... [ 64%] tests/unit/test_icephys_metadata_tables.py ............................. [ 69%] ................. [ 71%] tests/unit/test_image.py ........................... [ 76%] tests/unit/test_misc.py .................... [ 79%] tests/unit/test_mock.py ................................................ [ 86%] ................. [ 89%] tests/unit/test_ogen.py . [ 89%] tests/unit/test_ophys.py ...................... [ 93%] tests/unit/test_resources.py . [ 93%] tests/unit/test_retinotopy.py . [ 93%] tests/unit/test_scratch.py ............... [ 95%] tests/unit/test_spec.py ... [ 96%] tests/validation/test_validate.py ....................... [100%] =============================== warnings summary =============================== tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip_export /usr/lib/python3/dist-packages/hdmf/build/objectmapper.py:871: IncorrectDatasetShapeBuildWarning: Shape of data does not match shape in spec 'ImageReferences' warnings.warn(msg, IncorrectDatasetShapeBuildWarning) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============ 623 passed, 8 skipped, 2 warnings in 241.96s (0:04:01) ============ rm -fr -- /tmp/dh-xdg-rundir-Rluw4xzC create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-pynwb.substvars rm -fr -- debian/.debhelper/generated/python3-pynwb/ debian/python3-pynwb/ debian/tmp/ dh_auto_install --destdir=debian/python3-pynwb/ -O--buildsystem=pybuild install -m0755 -d /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' find debian -name "test_*.nwb" -delete rm -f .coverage.* # Remove duplicate directory. rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format/Readme.md' removed 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'/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/format' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source/_static' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage/source' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs/storage' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/README.rst removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/README.rst' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/requirements-doc.txt' rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/make.bat' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_experimental_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.13/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb cd './src/pynwb/nwb-schema//..' && find 'nwb-schema' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb chmod -R u\+rw,go=rX debian/python3-pynwb/usr/share/doc install -p -m0644 debian/copyright debian/python3-pynwb/usr/share/doc/python3-pynwb/copyright debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' # Remove extra license files rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -p -m0644 debian/.debhelper/generated/python3-pynwb/dh_installchangelogs.dch.trimmed debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog.Debian install -p -m0644 ./CHANGELOG.md debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20250414 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13) D: dh_python3 debhelper:174: source=pynwb, binary packages=['python3-pynwb'] D: dh_python3 dh_python3:205: processing package python3-pynwb... D: dh_python3 fs:50: moving files from debian/python3-pynwb/usr/lib/python3.13/dist-packages to debian/python3-pynwb/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4021975.XQVtNvrx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4021548.XcZvwbTx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4020686.XYtTETBx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4020049.XdvuCBjx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4019689.XUbhGXAx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4019020.XQqdmaex D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4018377.XbXwfajx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4017217.XGnCutHx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4014425.XatKrDax D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4012399.XYrdNBdx D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4012146.XUhMhuux D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4010922.XEREsOCx D: dh_python3 fs:179: Writing INSTALLER in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:190: Deleting RECORD in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:338: package python3-pynwb details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': {'debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info/METADATA'}, 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-pynwb D: dh_python3 pydist:175: trying to find dependency for h5py>=2.10 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:255: dependency: constructed version D: dh_python3 pydist:175: trying to find dependency for hdmf>=3.14.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for numpy>=1.18 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pandas>=1.1.5 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for python-dateutil>=2.7.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-hdmf (>= 3.9.0~)', 'python3-numpy', 'python3:any', 'python3-pandas', 'python3-h5py (>= 2.10)', 'python3-dateutil'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1728585089 as canonical time Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-pynwb chmod a-x usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json gzip -9nf usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json cd '/build/reproducible-path/pynwb-2.8.2' dh_fixperms -O--buildsystem=pybuild find debian/python3-pynwb ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-pynwb/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-pynwb/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-pynwb -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/postinst cat debian/python3-pynwb.postinst.debhelper >> debian/python3-pynwb/DEBIAN/postinst chmod 0755 -- debian/python3-pynwb/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/prerm cat debian/python3-pynwb.prerm.debhelper >> debian/python3-pynwb/DEBIAN/prerm chmod 0755 -- debian/python3-pynwb/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN echo misc:Depends= >> debian/python3-pynwb.substvars echo misc:Pre-Depends= >> debian/python3-pynwb.substvars dpkg-gencontrol -ppython3-pynwb -ldebian/changelog -Tdebian/python3-pynwb.substvars -cdebian/control -Pdebian/python3-pynwb chmod 0644 -- debian/python3-pynwb/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN cd debian/python3-pynwb >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-pynwb/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-pynwb .. dpkg-deb: building package 'python3-pynwb' in '../python3-pynwb_2.8.2-2_all.deb'. dpkg-genbuildinfo --build=binary -O../pynwb_2.8.2-2_arm64.buildinfo dpkg-genchanges --build=binary -O../pynwb_2.8.2-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3948603 and its subdirectories I: Current time: Fri Aug 8 16:51:21 +14 2025 I: pbuilder-time-stamp: 1754621481 + false + set +x Fri Aug 8 02:51:21 UTC 2025 I: Signing ./b2/pynwb_2.8.2-2_arm64.buildinfo as pynwb_2.8.2-2_arm64.buildinfo.asc Fri Aug 8 02:51:21 UTC 2025 I: Signed ./b2/pynwb_2.8.2-2_arm64.buildinfo as ./b2/pynwb_2.8.2-2_arm64.buildinfo.asc Fri Aug 8 02:51:21 UTC 2025 - build #2 for pynwb/unstable/arm64 on codethink04-arm64 done. Starting cleanup. All cleanup done. Fri Aug 8 02:51:21 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-WEWTgKvp, removing. /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP: total 108 drwxr-xr-x 2 jenkins jenkins 4096 Aug 8 02:46 b1 drwxr-xr-x 2 jenkins jenkins 4096 Aug 8 02:51 b2 -rw-r--r-- 1 jenkins jenkins 2406 Oct 10 2024 pynwb_2.8.2-2.dsc -rw------- 1 jenkins jenkins 91997 Aug 8 02:46 rbuildlog.mimwfCx /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1: total 1464 -rw-r--r-- 1 jenkins jenkins 88194 Aug 8 02:46 build.log -rw-r--r-- 1 jenkins jenkins 5040 Aug 8 02:46 pynwb_2.8.2-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2406 Aug 8 02:46 pynwb_2.8.2-2.dsc -rw-r--r-- 1 jenkins jenkins 7720 Aug 8 02:46 pynwb_2.8.2-2_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 8602 Aug 8 02:46 pynwb_2.8.2-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1173 Aug 8 02:46 pynwb_2.8.2-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1276 Aug 8 02:46 pynwb_2.8.2-2_source.changes -rw-r--r-- 1 jenkins jenkins 1356372 Aug 8 02:46 python3-pynwb_2.8.2-2_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2: total 1460 -rw-r--r-- 1 jenkins jenkins 90203 Aug 8 02:51 build.log -rw-r--r-- 1 jenkins jenkins 5040 Aug 8 02:51 pynwb_2.8.2-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2406 Aug 8 02:51 pynwb_2.8.2-2.dsc -rw-r--r-- 1 jenkins jenkins 7720 Aug 8 02:51 pynwb_2.8.2-2_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 8602 Aug 8 02:51 pynwb_2.8.2-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1173 Aug 8 02:51 pynwb_2.8.2-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1276 Aug 8 02:51 pynwb_2.8.2-2_source.changes -rw-r--r-- 1 jenkins jenkins 1356372 Aug 8 02:51 python3-pynwb_2.8.2-2_all.deb Fri Aug 8 02:51:22 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Fri Aug 8 02:51:23 UTC 2025 I: pynwb_2.8.2-2_arm64.changes: Format: 1.8 Date: Thu, 10 Oct 2024 20:31:29 +0200 Source: pynwb Binary: python3-pynwb Architecture: all Version: 2.8.2-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: python3-pynwb - Python library for working with Neurodata in the NWB format Closes: 1084039 Changes: pynwb (2.8.2-2) unstable; urgency=medium . * d/control: build depends on python3-hatch-vcs. (Closes: #1084039) * d/s/lintian-overrides: deleted: false positive fixed in lintian. Checksums-Sha1: acb7691972ee977761322c9a9c9f66459cce67f3 7720 pynwb_2.8.2-2_arm64.buildinfo 35d4483280d27d1cfe05669af8ac093e38f530b1 1356372 python3-pynwb_2.8.2-2_all.deb Checksums-Sha256: d47a86f6d069ba9c8df64664bc18faff0b9271b63fc7f0938ee26a58718c63f9 7720 pynwb_2.8.2-2_arm64.buildinfo 6b896a8d061676a4e3f0ae1b196d1cdc012ce7521a9ad7d093a189d7ba924a9b 1356372 python3-pynwb_2.8.2-2_all.deb Files: e13d625e2cdc565c17f567d1695174b0 7720 python optional pynwb_2.8.2-2_arm64.buildinfo 5198aec6e6df0e58aa6ffe061da14ab0 1356372 python optional python3-pynwb_2.8.2-2_all.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/pynwb_2.8.2-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/pynwb_2.8.2-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/pynwb_2.8.2-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/pynwb_2.8.2-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/arm64/pynwb_2.8.2-2_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/pynwb_2.8.2-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-08-08 02:46:06.990433206 +0000 +++ b2/build.log 2025-08-08 02:51:22.762848051 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Sep 9 21:03:52 -12 2026 -I: pbuilder-time-stamp: 1789031032 +I: Current time: Fri Aug 8 16:46:09 +14 2025 +I: pbuilder-time-stamp: 1754621169 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -24,52 +24,84 @@ dpkg-source: info: applying fix-syntax-warnings.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/940374/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 8 02:46 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='daae91437832439c88b54194000e43ec' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='940374' - PS1='# ' - PS2='> ' + INVOCATION_ID=78934810bff74b29acb44beb196c34d3 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3948603 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_xWp3 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1 --logfile b1/build.log pynwb_2.8.2-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pbuilderrc_K9nd --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2 --logfile b2/build.log pynwb_2.8.2-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/940374/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -258,7 +290,7 @@ Get: 123 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.5-2 [250 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.3.0-3 [115 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-5 [72.2 kB] -Fetched 56.6 MB in 0s (202 MB/s) +Fetched 56.6 MB in 0s (216 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) @@ -667,8 +699,8 @@ Setting up tzdata (2025b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Sep 10 09:04:15 UTC 2026. -Universal Time is now: Thu Sep 10 09:04:15 UTC 2026. +Local time is now: Fri Aug 8 02:46:33 UTC 2025. +Universal Time is now: Fri Aug 8 02:46:33 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -794,7 +826,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/pynwb-2.8.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pynwb_2.8.2-2_source.changes +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/pynwb-2.8.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pynwb_2.8.2-2_source.changes dpkg-buildpackage: info: source package pynwb dpkg-buildpackage: info: source version 2.8.2-2 dpkg-buildpackage: info: source distribution unstable @@ -899,8 +935,8 @@ warnings.warn(msg, IncorrectDatasetShapeBuildWarning) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -============ 623 passed, 8 skipped, 2 warnings in 243.83s (0:04:03) ============ - rm -fr -- /tmp/dh-xdg-rundir-dCLwC0nT +============ 623 passed, 8 skipped, 2 warnings in 241.96s (0:04:01) ============ + rm -fr -- /tmp/dh-xdg-rundir-Rluw4xzC create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1024,18 +1060,18 @@ D: dh_python3 dh_python3:205: processing package python3-pynwb... D: dh_python3 fs:50: moving files from debian/python3-pynwb/usr/lib/python3.13/dist-packages to debian/python3-pynwb/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1026241.XlWMcCux -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1025344.XCfyqdox -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1024488.XwmOFYfx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1023946.XsBItryx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1023292.XtozAVlx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1022236.XJSOyHIx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1021470.XMpKLDsx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1019199.XTsioQJx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1018271.XjjWRMAx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1017363.XajSzILx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1016586.XAvWkIxx -D: dh_python3 fs:254: removing dist-packages/.coverage.codethink03-arm64.1015612.XYsuZuhx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4021975.XQVtNvrx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4021548.XcZvwbTx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4020686.XYtTETBx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4020049.XdvuCBjx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4019689.XUbhGXAx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4019020.XQqdmaex +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4018377.XbXwfajx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4017217.XGnCutHx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4014425.XatKrDax +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4012399.XYrdNBdx +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4012146.XUhMhuux +D: dh_python3 fs:254: removing dist-packages/.coverage.i-capture-the-hostname.4010922.XEREsOCx D: dh_python3 fs:179: Writing INSTALLER in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:190: Deleting RECORD in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:338: package python3-pynwb details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': {'debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info/METADATA'}, 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} @@ -1055,20 +1091,20 @@ D: dh_python3 pydist:175: trying to find dependency for python-dateutil>=2.7.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps -D: dh_python3 depends:253: D={'python3-dateutil', 'python3:any', 'python3-hdmf (>= 3.9.0~)', 'python3-h5py (>= 2.10)', 'python3-numpy', 'python3-pandas'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:253: D={'python3-hdmf (>= 3.9.0~)', 'python3-numpy', 'python3:any', 'python3-pandas', 'python3-h5py (>= 2.10)', 'python3-dateutil'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1728585089 as canonical time - Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png using File::StripNondeterminism::handlers::png - Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png using File::StripNondeterminism::handlers::png + Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png using File::StripNondeterminism::handlers::png - Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png using File::StripNondeterminism::handlers::png - Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png using File::StripNondeterminism::handlers::png + Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png using File::StripNondeterminism::handlers::png + Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png using File::StripNondeterminism::handlers::png + Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png using File::StripNondeterminism::handlers::png + Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-pynwb chmod a-x usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json @@ -1109,12 +1145,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3948603/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/940374 and its subdirectories -I: Current time: Wed Sep 9 21:09:05 -12 2026 -I: pbuilder-time-stamp: 1789031345 +I: removing directory /srv/workspace/pbuilder/3948603 and its subdirectories +I: Current time: Fri Aug 8 16:51:21 +14 2025 +I: pbuilder-time-stamp: 1754621481 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/pynwb_2.8.2-2.diff: 74.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/pynwb_2.8.2-2.diff.gz b2/build.log: 83.3% -- replaced with stdout Compressing the 1st log... b1/build.log: 83.8% -- replaced with stdout Fri Aug 8 02:51:24 UTC 2025 I: diffoscope 303 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_pynwb_unstable_arm64_1754621484 + touch /var/log/reproducible-builds/diffoscope_stamp_pynwb_unstable_arm64_1754621484 + RESULT=0 + systemd-run '--description=diffoscope on pynwb/2.8.2-2 in unstable/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_3-108993 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP --run-session -c jenkins-reproducible-unstable-diffoscope-15113594-1ac2-4726-ad4e-eb7bbad03ce8 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/dbd-tmp-iaqcEzt ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pynwb_2.8.2-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pynwb_2.8.2-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pynwb_2.8.2-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1/pynwb_2.8.2-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2/pynwb_2.8.2-2_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_3-108993.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pynwb_2.8.2-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pynwb_2.8.2-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/pynwb_2.8.2-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b1/pynwb_2.8.2-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.zLz2VlPP/b2/pynwb_2.8.2-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 158ms CPU time consumed: 159ms _ _ __ _ _ _ ____ _| |__ | '_ \| | | | '_ \ \ /\ / / '_ \ | |_) | |_| | | | \ V V /| |_) | | .__/ \__, |_| |_|\_/\_/ |_.__/ |_| |___/ Fri Aug 8 02:51:24 UTC 2025 I: diffoscope 303 found no differences in the changes files, and a .buildinfo file also exists. Fri Aug 8 02:51:24 UTC 2025 I: pynwb from unstable built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-08-08 02:51:25] INFO: Starting at 2025-08-08 02:51:25.077467 [2025-08-08 02:51:25] INFO: Generating the pages of 1 package(s) [2025-08-08 02:51:25] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/arm64/pynwb didn't produce a buildlog, even though it has been built. [2025-08-08 02:51:25] INFO: Finished at 2025-08-08 02:51:25.229009, took: 0:00:00.151545 Fri Aug 8 02:51:25 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/arm64/pynwb.html Fri Aug 8 02:51:25 UTC 2025 I: Removing signed pynwb_2.8.2-2_arm64.buildinfo.asc files: removed './b1/pynwb_2.8.2-2_arm64.buildinfo.asc' removed './b2/pynwb_2.8.2-2_arm64.buildinfo.asc' 1754621485 arm64 unstable pynwb Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/pynwb_2.8.2-2.rbuild.log: 81.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/pynwb_2.8.2-2.rbuild.log.gz [2025-08-08 02:51:25] INFO: Starting at 2025-08-08 02:51:25.484482 [2025-08-08 02:51:25] INFO: Generating the pages of 1 package(s) [2025-08-08 02:51:25] INFO: Finished at 2025-08-08 02:51:25.646568, took: 0:00:00.162090 All cleanup done. Fri Aug 8 02:51:25 UTC 2025 - total duration: 0h 10m 44s. Fri Aug 8 02:51:25 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-0iZEdMz3, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 10min 44.896s CPU time consumed: 4.499s