Running as unit: rb-build-arm64_6-119099.service; invocation ID: 7a3e3ae35a104494a80b5a4e8107c391 ==================================================================================== Thu Sep 18 15:34:52 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_6) on jenkins, called using "codethink03-arm64 codethink04-arm64" as arguments. Thu Sep 18 15:34:52 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-PJHSVEzi" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Sep 18 15:34:52 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Thu Sep 18 15:34:52 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-DgTbsW' Thu Sep 18 15:34:52 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Thu Sep 18 15:34:52 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-WsLwBA' ok, let's check if libpwizlite is building anywhere yet… ok, libpwizlite is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of libpwizlite in forky on arm64 on jenkins now. 1st build will be done on codethink03-arm64.debian.net. 2nd build will be done on codethink04-arm64.debian.net. ============================================================================= Thu Sep 18 15:34:59 UTC 2025 I: starting to build libpwizlite/forky/arm64 on jenkins on '2025-09-18 15:34' Thu Sep 18 15:34:59 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_6/119099/console.log 1758209699 arm64 forky libpwizlite Thu Sep 18 15:34:59 UTC 2025 I: Downloading source for forky/libpwizlite=3.0.10-1 --2025-09-18 15:34:59-- http://deb.debian.org/debian/pool/main/libp/libpwizlite/libpwizlite_3.0.10-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2257 (2.2K) [text/prs.lines.tag] Saving to: ‘libpwizlite_3.0.10-1.dsc’ 0K .. 100% 226M=0s 2025-09-18 15:34:59 (226 MB/s) - ‘libpwizlite_3.0.10-1.dsc’ saved [2257/2257] --2025-09-18 15:34:59-- http://deb.debian.org/debian/pool/main/libp/libpwizlite/libpwizlite_3.0.10-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2257 (2.2K) [text/prs.lines.tag] Saving to: ‘libpwizlite_3.0.10-1.dsc’ 0K .. 100% 226M=0s 2025-09-18 15:34:59 (226 MB/s) - ‘libpwizlite_3.0.10-1.dsc’ saved [2257/2257] Thu Sep 18 15:34:59 UTC 2025 I: libpwizlite_3.0.10-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libpwizlite Binary: libpwizlite-dev, libpwizlite3t64 Architecture: any Version: 3.0.10-1 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: https://salsa.debian.org/debichem-team/libpwizlite Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/debichem-team/libpwizlite Vcs-Git: https://salsa.debian.org/debichem-team/libpwizlite.git Build-Depends: debhelper-compat (= 13), cmake, dh-exec, dpkg-dev (>= 1.18.25), libboost1.88-dev, libboost-thread1.88-dev, libboost-filesystem1.88-dev, libboost-iostreams1.88-dev, libboost-chrono1.88-dev, libboost-random1.88-dev, zlib1g-dev, python3-docutils Package-List: libpwizlite-dev deb libdevel optional arch=any libpwizlite3t64 deb libs optional arch=any Checksums-Sha1: a6b34e932bd98ba8c704659f73867f7f5cf276c7 824516 libpwizlite_3.0.10.orig.tar.gz 4de460ac54e9a99ab36e7cfe27e8edf2b2397c29 8912 libpwizlite_3.0.10-1.debian.tar.xz Checksums-Sha256: e5cf7b851753d2f6e879c8d8d88a59578081e2e99f371e61c971206086da64e1 824516 libpwizlite_3.0.10.orig.tar.gz 23bde004e43b6f59b42ad9585a5bc3acea1d55b8b57b00a3b1c33e2fd9d5ea30 8912 libpwizlite_3.0.10-1.debian.tar.xz Files: 099312e7228b3b3c1c0da5f38361963f 824516 libpwizlite_3.0.10.orig.tar.gz 90924bb993c36b05987b33fd76686977 8912 libpwizlite_3.0.10-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEsFMwThfW1Bndm0ZRQatITXaUz0IFAmi+tRUACgkQQatITXaU z0JKNg/9EJJ91QZd3wI6n1EVyrLwBiQ0dCqDNnhImRnKdV/YFpPL3DGkAgpkSQEM gE+FPrLlp2T5CfosH/QMug/SKMmHJSM130X+Ks9bBkmsD4l5pvZy0nr7/6w3fBrI Xs6EmpGQnJfgDi4yhjbOrDQpynWWAPvwIGVoppBjGQOgeYf1v64NrC24IrkbnCy9 f+rxDO4NTlmtsXh2L90+meKsPNqv8u9g7W0E2Qp2Da1VjBfbWV9EFg+oH6Mhsqgd gY0j6nXuYrftnDIrxfmfTuAAZeODZPSIS6lv/HFcoxqqnE4bZzmXa4EN4Ga69WXc z4otXjoJWxBUgSudC36tIZvIVc9umnCzHq+J2L/kXJ6vK9xT29y9ZzkjvpoOBqlr bq/5ATBMvu8zEdxPBYfURoMJRxuMiS0ggnuKxESPNHCtn/ZJERcPfff88AH2t+MM j1UwbxAveKwMTnDzhS7WQDb/c9g7dWKGgjJXwt/t7EfAnRlYwfOk2r9t3MyHJ3iW USTW9OX13F6MiOqVZzzhE8Uf6XSouukQOKSwMl0SsFXZ2FaGebRvLk/e4DabWRrN Qg64qaZoq5/5Xx7zKkdEbjREhYVC7ZXiHjX+qv4D5UjbLa7MzTLb0zD2ZcWnPFI9 vRoplIDSxEW3lce8Ggt30OYRduS+OM/JYPiA/zllvgTqbP/kMDY= =e7rC -----END PGP SIGNATURE----- Thu Sep 18 15:34:59 UTC 2025 I: Checking whether the package is not for us Thu Sep 18 15:34:59 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Thu Sep 18 15:34:59 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Thu Sep 18 15:34:59 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Thu Sep 18 15:34:59 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-oHbApH' ==================================================================================== Wed Oct 21 21:58:01 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "1 libpwizlite forky /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI 3.0.10-1" as arguments. Wed Oct 21 21:58:01 UTC 2026 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-gR6X0REs" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Oct 21 21:58:01 UTC 2026 I: Downloading source for forky/libpwizlite=3.0.10-1 Reading package lists... NOTICE: 'libpwizlite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/libpwizlite.git Please use: git clone https://salsa.debian.org/debichem-team/libpwizlite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 836 kB of source archives. Get:1 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (dsc) [2257 B] Get:2 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (tar) [825 kB] Get:3 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (diff) [8912 B] Fetched 836 kB in 0s (2278 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libpwizlite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/libpwizlite.git Please use: git clone https://salsa.debian.org/debichem-team/libpwizlite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 836 kB of source archives. Get:1 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (dsc) [2257 B] Get:2 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (tar) [825 kB] Get:3 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (diff) [8912 B] Fetched 836 kB in 0s (2278 kB/s) Download complete and in download only mode ============================================================================= Building libpwizlite in forky on arm64 on codethink03-arm64 now. Date: Wed Oct 21 22:58:02 BST 2026 Date UTC: Wed Oct 21 21:58:02 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Oct 21 09:58:02 -12 2026 I: pbuilder-time-stamp: 1792619882 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libpwizlite_3.0.10-1.dsc] I: copying [./libpwizlite_3.0.10.orig.tar.gz] I: copying [./libpwizlite_3.0.10-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libpwizlite_3.0.10-1.dsc: no acceptable signature found dpkg-source: info: extracting libpwizlite in libpwizlite-3.0.10 dpkg-source: info: unpacking libpwizlite_3.0.10.orig.tar.gz dpkg-source: info: unpacking libpwizlite_3.0.10-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3561100/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='5e180ef467394b67ab8b6031bba6baa1' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3561100' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_QxHw --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1 --logfile b1/build.log libpwizlite_3.0.10-1.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3561100/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, dh-exec, dpkg-dev (>= 1.18.25), libboost1.88-dev, libboost-thread1.88-dev, libboost-filesystem1.88-dev, libboost-iostreams1.88-dev, libboost-chrono1.88-dev, libboost-random1.88-dev, zlib1g-dev, python3-docutils dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on libboost1.88-dev; however: Package libboost1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread1.88-dev; however: Package libboost-thread1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem1.88-dev; however: Package libboost-filesystem1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams1.88-dev; however: Package libboost-iostreams1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono1.88-dev; however: Package libboost-chrono1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-random1.88-dev; however: Package libboost-random1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-docutils; however: Package python3-docutils is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} gcc-14-base{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-atomic1.88-dev{a} libboost-atomic1.88.0{a} libboost-chrono1.88-dev{a} libboost-chrono1.88.0{a} libboost-date-time1.88-dev{a} libboost-date-time1.88.0{a} libboost-filesystem1.88-dev{a} libboost-filesystem1.88.0{a} libboost-iostreams1.88-dev{a} libboost-iostreams1.88.0{a} libboost-random1.88-dev{a} libboost-random1.88.0{a} libboost-regex1.88-dev{a} libboost-regex1.88.0{a} libboost-serialization1.88-dev{a} libboost-serialization1.88.0{a} libboost-system1.88-dev{a} libboost-system1.88.0{a} libboost-thread1.88-dev{a} libboost-thread1.88.0{a} libboost1.88-dev{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgcc-14-dev{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu-dev{a} libicu76{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libstdc++-14-dev{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-docutils{a} python3-minimal{a} python3-roman{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-pil python3-pygments wget 0 packages upgraded, 105 newly installed, 0 to remove and 0 not upgraded. Need to get 78.4 MB of archives. After unpacking 488 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.7-1 [857 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.7-1 [2001 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.7-1 [1895 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 procps arm64 2:4.0.4-9 [871 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-3 [98.1 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 cmake-data all 4.1.1+really3.31.6-1 [2268 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 libarchive13t64 arm64 3.7.4-4+b1 [323 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 40 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libnghttp3-9 arm64 1.11.0-1 [66.7 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libcurl4t64 arm64 8.16.0-1 [388 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libjsoncpp26 arm64 1.9.6-4 [73.2 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 librhash1 arm64 1.4.6-1 [131 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 libuv1t64 arm64 1.51.0-2 [150 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 cmake arm64 4.1.1+really3.31.6-1 [9905 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.26 [91.8 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 66 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 debhelper all 13.26 [939 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 dh-exec arm64 0.30+b1 [25.8 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 xml-core all 0.19 [20.1 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 gcc-14-base arm64 14.3.0-8 [52.1 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libicu76 arm64 76.1-4 [9524 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 icu-devtools arm64 76.1-4 [200 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libgcc-14-dev arm64 14.3.0-8 [2364 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libstdc++-14-dev arm64 14.3.0-8 [2567 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 libboost1.88-dev arm64 1.88.0-1.4 [11.2 MB] Get: 82 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.88.0 arm64 1.88.0-1.4 [235 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.88-dev arm64 1.88.0-1.4 [236 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.88.0 arm64 1.88.0-1.4 [241 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.88-dev arm64 1.88.0-1.4 [247 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.88.0 arm64 1.88.0-1.4 [232 kB] Get: 87 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.88.0 arm64 1.88.0-1.4 [335 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.88-dev arm64 1.88.0-1.4 [383 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.88-dev arm64 1.88.0-1.4 [240 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.88.0 arm64 1.88.0-1.4 [279 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libboost-system1.88.0 arm64 1.88.0-1.4 [232 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libboost-system1.88-dev arm64 1.88.0-1.4 [233 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.88-dev arm64 1.88.0-1.4 [300 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libboost-random1.88.0 arm64 1.88.0-1.4 [239 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libboost-random1.88-dev arm64 1.88.0-1.4 [242 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libboost-regex1.88.0 arm64 1.88.0-1.4 [320 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libicu-dev arm64 76.1-4 [10.6 MB] Get: 98 http://deb.debian.org/debian forky/main arm64 libboost-regex1.88-dev arm64 1.88.0-1.4 [340 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.88.0 arm64 1.88.0-1.4 [255 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.88-dev arm64 1.88.0-1.4 [265 kB] Get: 101 http://deb.debian.org/debian forky/main arm64 libboost-thread1.88.0 arm64 1.88.0-1.4 [264 kB] Get: 102 http://deb.debian.org/debian forky/main arm64 libboost-thread1.88-dev arm64 1.88.0-1.4 [274 kB] Get: 103 http://deb.debian.org/debian forky/main arm64 python3-roman all 5.1-1 [11.0 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 105 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 78.4 MB in 4s (19.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_arm64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:arm64 (3.13.7-1) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20354 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_arm64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.3-3_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_arm64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21369 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.7-1_arm64.deb ... Unpacking python3 (3.13.7-1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../01-libproc2-0_2%3a4.0.4-9_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-9) ... Selecting previously unselected package procps. Preparing to unpack .../02-procps_2%3a4.0.4-9_arm64.deb ... Unpacking procps (2:4.0.4-9) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../03-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../05-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../07-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../08-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../09-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../10-bsdextrautils_2.41.1-3_arm64.deb ... Unpacking bsdextrautils (2.41.1-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../11-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../12-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.20-1_arm64.deb ... Unpacking m4 (1.4.20-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../18-cmake-data_4.1.1+really3.31.6-1_all.deb ... Unpacking cmake-data (4.1.1+really3.31.6-1) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../19-libxml2-16_2.14.5+dfsg-0.2_arm64.deb ... Unpacking libxml2-16:arm64 (2.14.5+dfsg-0.2) ... Selecting previously unselected package libarchive13t64:arm64. Preparing to unpack .../20-libarchive13t64_3.7.4-4+b1_arm64.deb ... Unpacking libarchive13t64:arm64 (3.7.4-4+b1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../21-libbrotli1_1.1.0-2+b7_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b7) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../22-libkrb5support0_1.21.3-5_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-5) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../23-libcom-err2_1.47.2-3+b3_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.2-3+b3) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../24-libk5crypto3_1.21.3-5_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-5) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../25-libkeyutils1_1.6.3-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-6) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../26-libkrb5-3_1.21.3-5_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-5) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../27-libgssapi-krb5-2_1.21.3-5_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-5) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../28-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../29-libidn2-0_2.3.8-4_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.8-4) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../30-libsasl2-modules-db_2.1.28+dfsg1-9_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../31-libsasl2-2_2.1.28+dfsg1-9_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:arm64. Preparing to unpack .../32-libldap2_2.6.10+dfsg-1_arm64.deb ... Unpacking libldap2:arm64 (2.6.10+dfsg-1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../33-libnghttp2-14_1.64.0-1.1+b1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../34-libnghttp3-9_1.11.0-1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.11.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../35-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../36-libp11-kit0_0.25.5-3_arm64.deb ... Unpacking libp11-kit0:arm64 (0.25.5-3) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../37-libtasn1-6_4.20.0-2_arm64.deb ... Unpacking libtasn1-6:arm64 (4.20.0-2) ... Selecting previously unselected package libgnutls30t64:arm64. Preparing to unpack .../38-libgnutls30t64_3.8.9-3_arm64.deb ... Unpacking libgnutls30t64:arm64 (3.8.9-3) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../39-librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../40-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:arm64. Preparing to unpack .../41-libcurl4t64_8.16.0-1_arm64.deb ... Unpacking libcurl4t64:arm64 (8.16.0-1) ... Selecting previously unselected package libjsoncpp26:arm64. Preparing to unpack .../42-libjsoncpp26_1.9.6-4_arm64.deb ... Unpacking libjsoncpp26:arm64 (1.9.6-4) ... Selecting previously unselected package librhash1:arm64. Preparing to unpack .../43-librhash1_1.4.6-1_arm64.deb ... Unpacking librhash1:arm64 (1.4.6-1) ... Selecting previously unselected package libuv1t64:arm64. Preparing to unpack .../44-libuv1t64_1.51.0-2_arm64.deb ... Unpacking libuv1t64:arm64 (1.51.0-2) ... Selecting previously unselected package cmake. Preparing to unpack .../45-cmake_4.1.1+really3.31.6-1_arm64.deb ... Unpacking cmake (4.1.1+really3.31.6-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../46-libdebhelper-perl_13.26_all.deb ... Unpacking libdebhelper-perl (13.26) ... Selecting previously unselected package libtool. Preparing to unpack .../47-libtool_2.5.4-5_all.deb ... Unpacking libtool (2.5.4-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../48-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... 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I: Building the package I: Running cd /build/reproducible-path/libpwizlite-3.0.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libpwizlite_3.0.10-1_source.changes dpkg-buildpackage: info: source package libpwizlite dpkg-buildpackage: info: source version 3.0.10-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --build-system=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10' rm -f debian/libpwizlite.3 rm -rf debian/includes rm -rf obj-aarch64-linux-gnu dh_clean make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10' dh_autoreconf_clean -O--build-system=cmake dh_clean -O--build-system=cmake debian/rules binary dh binary --build-system=cmake dh_update_autotools_config -O--build-system=cmake dh_autoreconf -O--build-system=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10' dh_auto_configure -- \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DCMAKE_BUILD_TYPE=release cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=release .. -- The CXX compiler identification is GNU 15.2.0 -- The C compiler identification is GNU 15.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- CMAKE_LIBRARY_ARCHITECTURE: aarch64-linux-gnu -- Set CMAKE_INSTALL_PREFIX to /usr -- Install directory prefix: /usr -- CMAKE_INSTALL_FULL_LIBDIR: /usr/lib/aarch64-linux-gnu -- CMAKE_INSTALL_FULL_INCLUDEDIR: /usr/include Configuring build for project libpwizlite -- Set CMAKE_CXX_STANDARD to 17 (required) -- CMAKE_CXX_COMPILER: /usr/bin/c++ -- Setting definition -Wno-unknown-pragmas. -- Setting definition -Wall. -- Setting definition -Wextra. -- CMAKE_SOURCE_DIR: /build/reproducible-path/libpwizlite-3.0.10 UNIX non APPLE environment Please run the configuration like this: cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE=Debug ../development -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.3.1") CMake Warning (dev) at CMakeStuff/toolchains/unix-toolchain.cmake:12 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:104 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.88.0/BoostConfig.cmake (found version "1.88.0") found components: iostreams thread filesystem chrono -- Starting configuration of libpwizlite -- The build toolchain is: Linux  -- CMAKE_CURRENT_BINARY_DIR: /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu -- CMAKE_BUILD_TYPE: release. -- Adding subdirectory src for PROJECT: libpwizlite -- Setting -Wall. -- Boost_LIBRARIES found 1_88 -- Boost_INCLUDES: /usr/include -- Boost_LIB_DIRS: /usr/lib/aarch64-linux-gnu STATUS: Now managing the CPack process Including file : /build/reproducible-path/libpwizlite-3.0.10/CMakeStuff/targz-source-package-creation.cmake After file inclusion CPACK_SOURCE_IGNORE_FILES: \\.cache/;.*\\.tar\\.gz;moc_.*cxx;\\.#.*;.*\\.aux;.*\\.bbl;.*\\.blg;.*\\.log;.*\\.out;.*\\.toc;/devel_archives/;/doc\\/html/;/doc\\/latex/;Makefile;install_manifest.txt;CMakeCache.txt;CPackConfig.cmake;CPackSourceConfig.cmake;/CMakeFiles/;/_CPack_Packages/;/Debug/;/Release/;/tests/;/\\.externalToolBuilders/;/\\.git/;/\\.kdev4/;development.kdev4;/\\.settings/;Makefile;\\.cdtbuild;\\.cdtproject;\\.project;\\.cproject;/win32/;/win64/;/build/;/buildwin64/;/cbuild/;/wbuild/;/bin/;/buildmingw/;test\\.ods;buildwin32.cmd;libpwizlite.so;OpenDocument-v1.0-os.pdf;debian/;compile_commands.json -- Configuring done (1.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu rst2man debian/libpwizlite.3.rst > debian/libpwizlite.3 sh debian/make-included-headers-hierarchy.sh baseName: Filesystem.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Filesystem.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Filesystem.hpp' baseName: virtual_map.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/virtual_map.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/virtual_map.hpp' baseName: unit.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/unit.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/unit.hpp' baseName: shared_map.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/shared_map.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/shared_map.hpp' baseName: random_access_compressed_ifstream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/random_access_compressed_ifstream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/random_access_compressed_ifstream.hpp' baseName: optimized_lexical_cast.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/optimized_lexical_cast.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/optimized_lexical_cast.hpp' baseName: mru_list.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/mru_list.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/mru_list.hpp' baseName: endian.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/endian.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/endian.hpp' baseName: cpp_cli_utilities.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/cpp_cli_utilities.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/cpp_cli_utilities.hpp' baseName: automation_vector.h dirName: pwiz/utility/misc 'pwiz/utility/misc/automation_vector.h' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/automation_vector.h' baseName: almost_equal.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/almost_equal.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/almost_equal.hpp' baseName: VendorReaderTestHarness.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/VendorReaderTestHarness.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/VendorReaderTestHarness.hpp' baseName: Timer.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Timer.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Timer.hpp' baseName: TabReader.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/TabReader.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/TabReader.hpp' baseName: String.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/String.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/String.hpp' baseName: Stream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Stream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Stream.hpp' baseName: Std.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Std.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Std.hpp' baseName: Singleton.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Singleton.hpp' baseName: SHA1_ostream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1_ostream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1_ostream.hpp' baseName: SHA1Calculator.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1Calculator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1Calculator.hpp' baseName: SHA1.h dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1.h' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1.h' baseName: Once.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Once.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Once.hpp' baseName: MSIHandler.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/MSIHandler.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/MSIHandler.hpp' baseName: IterationListener.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/IterationListener.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/IterationListener.hpp' baseName: IntegerSet.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/IntegerSet.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/IntegerSet.hpp' baseName: Image.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Image.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Image.hpp' baseName: Export.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Export.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Export.hpp' baseName: Exception.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Exception.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Exception.hpp' baseName: Environment.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Environment.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Environment.hpp' baseName: DateTime.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/DateTime.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/DateTime.hpp' baseName: Container.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Container.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Container.hpp' baseName: ClickwrapPrompter.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/ClickwrapPrompter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/ClickwrapPrompter.hpp' baseName: CharIndexedVector.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/CharIndexedVector.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/CharIndexedVector.hpp' baseName: COMInitializer.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/COMInitializer.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/COMInitializer.hpp' baseName: BinaryData.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/BinaryData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/BinaryData.hpp' baseName: Base64.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Base64.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Base64.hpp' baseName: XMLWriter.hpp dirName: pwiz/utility/minimxml 'pwiz/utility/minimxml/XMLWriter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/minimxml/XMLWriter.hpp' baseName: SAXParser.hpp dirName: pwiz/utility/minimxml 'pwiz/utility/minimxml/SAXParser.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/minimxml/SAXParser.hpp' baseName: round.hpp dirName: pwiz/utility/math 'pwiz/utility/math/round.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/round.hpp' baseName: qr.hpp dirName: pwiz/utility/math 'pwiz/utility/math/qr.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/qr.hpp' baseName: erf.hpp dirName: pwiz/utility/math 'pwiz/utility/math/erf.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/erf.hpp' baseName: Types.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Types.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Types.hpp' baseName: Stats.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Stats.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Stats.hpp' baseName: Parabola.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Parabola.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Parabola.hpp' baseName: OrderedPair.hpp dirName: pwiz/utility/math 'pwiz/utility/math/OrderedPair.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/OrderedPair.hpp' baseName: MatrixInverse.hpp dirName: pwiz/utility/math 'pwiz/utility/math/MatrixInverse.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/MatrixInverse.hpp' baseName: MatchedFilter.hpp dirName: pwiz/utility/math 'pwiz/utility/math/MatchedFilter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/MatchedFilter.hpp' baseName: LinearSolver.hpp dirName: pwiz/utility/math 'pwiz/utility/math/LinearSolver.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/LinearSolver.hpp' baseName: LinearLeastSquares.hpp dirName: pwiz/utility/math 'pwiz/utility/math/LinearLeastSquares.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/LinearLeastSquares.hpp' baseName: HouseholderQR.hpp dirName: pwiz/utility/math 'pwiz/utility/math/HouseholderQR.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/HouseholderQR.hpp' baseName: determinebinwidth.hpp dirName: pwiz/utility/findmf/base/resample/utilities 'pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp' baseName: masscomparefunctors.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/masscomparefunctors.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/masscomparefunctors.hpp' baseName: determinebinwidth.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/determinebinwidth.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/determinebinwidth.hpp' baseName: breakspec.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/breakspec.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/breakspec.hpp' baseName: bin1d.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/bin1d.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/bin1d.hpp' baseName: preparedata.hpp dirName: pwiz/utility/findmf/base/filter/utilities 'pwiz/utility/findmf/base/filter/utilities/preparedata.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/utilities/preparedata.hpp' baseName: gauss.hpp dirName: pwiz/utility/findmf/base/filter/utilities 'pwiz/utility/findmf/base/filter/utilities/gauss.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/utilities/gauss.hpp' baseName: gaussfilter.hpp dirName: pwiz/utility/findmf/base/filter 'pwiz/utility/findmf/base/filter/gaussfilter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/gaussfilter.hpp' baseName: filter.hpp dirName: pwiz/utility/findmf/base/filter 'pwiz/utility/findmf/base/filter/filter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/filter.hpp' baseName: interpolation.hpp dirName: pwiz/utility/findmf/base/base/utilities 'pwiz/utility/findmf/base/base/utilities/interpolation.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/utilities/interpolation.hpp' baseName: base.hpp dirName: pwiz/utility/findmf/base/base/utilities 'pwiz/utility/findmf/base/base/utilities/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/utilities/base.hpp' baseName: scale.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/scale.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/scale.hpp' baseName: interpolate.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/interpolate.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/interpolate.hpp' baseName: diff.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/diff.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/diff.hpp' baseName: copyif.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/copyif.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/copyif.hpp' baseName: constants.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/constants.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/constants.hpp' baseName: base.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/base.hpp' baseName: MzMobilityWindow.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/MzMobilityWindow.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/MzMobilityWindow.hpp' baseName: MZTolerance.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/MZTolerance.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/MZTolerance.hpp' baseName: IsotopeTable.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeTable.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeTable.hpp' baseName: IsotopeEnvelopeEstimator.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp' baseName: IsotopeCalculator.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeCalculator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeCalculator.hpp' baseName: Ion.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/Ion.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/Ion.hpp' baseName: ChemistryData.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/ChemistryData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/ChemistryData.hpp' baseName: Chemistry.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/Chemistry.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/Chemistry.hpp' baseName: Connection_mzMLb.hpp dirName: pwiz/data/msdata/mzmlb 'pwiz/data/msdata/mzmlb/Connection_mzMLb.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/mzmlb/Connection_mzMLb.hpp' baseName: examples.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/examples.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/examples.hpp' baseName: Version.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Version.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Version.hpp' baseName: TextWriter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/TextWriter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/TextWriter.hpp' baseName: SpectrumWorkerThreads.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumWorkerThreads.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumWorkerThreads.hpp' baseName: SpectrumList_mzXML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mzXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mzXML.hpp' baseName: SpectrumList_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mzML.hpp' baseName: SpectrumList_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mz5.hpp' baseName: SpectrumList_MSn.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_MSn.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_MSn.hpp' baseName: SpectrumList_MGF.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_MGF.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_MGF.hpp' baseName: SpectrumList_BTDX.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_BTDX.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_BTDX.hpp' baseName: SpectrumListWrapper.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListWrapper.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListWrapper.hpp' baseName: SpectrumListCache.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListCache.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListCache.hpp' baseName: SpectrumListBase.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListBase.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListBase.hpp' baseName: SpectrumIterator.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumIterator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumIterator.hpp' baseName: SpectrumInfo.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumInfo.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumInfo.hpp' baseName: Serializer_mzXML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mzXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mzXML.hpp' baseName: Serializer_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mzML.hpp' baseName: Serializer_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mz5.hpp' baseName: Serializer_MSn.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_MSn.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_MSn.hpp' baseName: Serializer_MGF.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_MGF.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_MGF.hpp' baseName: SHA1OutputObserver.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SHA1OutputObserver.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SHA1OutputObserver.hpp' baseName: References.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/References.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/References.hpp' baseName: Reader.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Reader.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Reader.hpp' baseName: RAMPAdapter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/RAMPAdapter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/RAMPAdapter.hpp' baseName: MemoryMRUCache.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MemoryMRUCache.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MemoryMRUCache.hpp' baseName: MSNumpress.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSNumpress.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSNumpress.hpp' baseName: MSDataMerger.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSDataMerger.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSDataMerger.hpp' baseName: MSDataFile.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSDataFile.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSDataFile.hpp' baseName: MSData.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSData.hpp' baseName: LegacyAdapter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/LegacyAdapter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/LegacyAdapter.hpp' baseName: Index_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Index_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Index_mzML.hpp' baseName: IO.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/IO.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/IO.hpp' baseName: Diff.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Diff.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Diff.hpp' baseName: DefaultReaderList.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/DefaultReaderList.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/DefaultReaderList.hpp' baseName: ChromatogramList_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramList_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramList_mzML.hpp' baseName: ChromatogramList_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramList_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramList_mz5.hpp' baseName: ChromatogramListBase.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramListBase.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramListBase.hpp' baseName: BinaryDataEncoder.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/BinaryDataEncoder.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/BinaryDataEncoder.hpp' baseName: SampleDatum.hpp dirName: pwiz/data/misc 'pwiz/data/misc/SampleDatum.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/SampleDatum.hpp' baseName: PeakData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/PeakData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/PeakData.hpp' baseName: MinimumPepXML.hpp dirName: pwiz/data/misc 'pwiz/data/misc/MinimumPepXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/MinimumPepXML.hpp' baseName: FrequencyDataTestData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/FrequencyDataTestData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/FrequencyDataTestData.hpp' baseName: FrequencyData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/FrequencyData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/FrequencyData.hpp' baseName: CalibrationParameters.hpp dirName: pwiz/data/misc 'pwiz/data/misc/CalibrationParameters.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/CalibrationParameters.hpp' baseName: obo.hpp dirName: pwiz/data/common 'pwiz/data/common/obo.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/obo.hpp' baseName: diff_std.hpp dirName: pwiz/data/common 'pwiz/data/common/diff_std.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/diff_std.hpp' baseName: cv.hpp dirName: pwiz/data/common 'pwiz/data/common/cv.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/cv.hpp' baseName: Unimod.hpp dirName: pwiz/data/common 'pwiz/data/common/Unimod.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/Unimod.hpp' baseName: ParamTypes.hpp dirName: pwiz/data/common 'pwiz/data/common/ParamTypes.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/ParamTypes.hpp' baseName: MemoryIndex.hpp dirName: pwiz/data/common 'pwiz/data/common/MemoryIndex.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/MemoryIndex.hpp' baseName: Index.hpp dirName: pwiz/data/common 'pwiz/data/common/Index.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/Index.hpp' baseName: CVTranslator.hpp dirName: pwiz/data/common 'pwiz/data/common/CVTranslator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/CVTranslator.hpp' baseName: BinaryIndexStream.hpp dirName: pwiz/data/common 'pwiz/data/common/BinaryIndexStream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/BinaryIndexStream.hpp' baseName: SpectrumList_Demux.hpp dirName: pwiz/analysis/spectrum_processing 'pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp' baseName: DemuxDataProcessingStrings.hpp dirName: pwiz/analysis/demux 'pwiz/analysis/demux/DemuxDataProcessingStrings.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/analysis/demux/DemuxDataProcessingStrings.hpp' baseName: Version.hpp dirName: pwiz 'pwiz/Version.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/Version.hpp' baseName: thread_specific_singleton.hpp dirName: boost/utility 'boost/utility/thread_specific_singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/thread_specific_singleton.hpp' baseName: singleton.hpp dirName: boost/utility 'boost/utility/singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/singleton.hpp' baseName: mutexed_singleton.hpp dirName: boost/utility 'boost/utility/mutexed_singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/mutexed_singleton.hpp' baseName: singleton_manager.hpp dirName: boost/utility/detail 'boost/utility/detail/singleton_manager.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/singleton_manager.hpp' baseName: restricted.hpp dirName: boost/utility/detail 'boost/utility/detail/restricted.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/restricted.hpp' baseName: member_dereference.hpp dirName: boost/utility/detail 'boost/utility/detail/member_dereference.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/member_dereference.hpp' baseName: windows.hpp dirName: boost/nowide 'boost/nowide/windows.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/windows.hpp' baseName: system.hpp dirName: boost/nowide 'boost/nowide/system.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/system.hpp' baseName: stackstring.hpp dirName: boost/nowide 'boost/nowide/stackstring.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/stackstring.hpp' baseName: iostream.hpp dirName: boost/nowide 'boost/nowide/iostream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/iostream.hpp' baseName: fstream.hpp dirName: boost/nowide 'boost/nowide/fstream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/fstream.hpp' baseName: filebuf.hpp dirName: boost/nowide 'boost/nowide/filebuf.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/filebuf.hpp' baseName: cstdlib.hpp dirName: boost/nowide 'boost/nowide/cstdlib.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cstdlib.hpp' baseName: cstdio.hpp dirName: boost/nowide 'boost/nowide/cstdio.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cstdio.hpp' baseName: convert.hpp dirName: boost/nowide 'boost/nowide/convert.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/convert.hpp' baseName: config.hpp dirName: boost/nowide 'boost/nowide/config.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/config.hpp' baseName: cenv.hpp dirName: boost/nowide 'boost/nowide/cenv.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cenv.hpp' baseName: args.hpp dirName: boost/nowide 'boost/nowide/args.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/args.hpp' baseName: base64.hpp dirName: boost/iostreams/filter 'boost/iostreams/filter/base64.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/iostreams/filter/base64.hpp' baseName: arbitrary_positional_facade.hpp dirName: boost/iostreams 'boost/iostreams/arbitrary_positional_facade.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/iostreams/arbitrary_positional_facade.hpp' baseName: foreach_field.hpp dirName: boost 'boost/foreach_field.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/foreach_field.hpp' baseName: macros.hpp dirName: boost/enum 'boost/enum/macros.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/macros.hpp' baseName: iterator.hpp dirName: boost/enum 'boost/enum/iterator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/iterator.hpp' baseName: bitfield.hpp dirName: boost/enum 'boost/enum/bitfield.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/bitfield.hpp' baseName: base.hpp dirName: boost/enum 'boost/enum/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/base.hpp' baseName: enum.hpp dirName: boost 'boost/enum.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum.hpp' make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10' dh_auto_build -O--build-system=cmake cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libpwizlite-3.0.10 -B/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/depend make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/depend make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libpwizlite-3.0.10 /build/reproducible-path/libpwizlite-3.0.10/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libpwizlite-3.0.10 /build/reproducible-path/libpwizlite-3.0.10/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [ 1%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp [ 2%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp [ 3%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o [ 6%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o [ 5%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o [ 7%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp [ 8%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp [ 10%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ 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-ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 114 | } else if (init == mask) { | ~~~~~^~~~~~~ In file included from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:27: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here 346 | long long extrapol; | ^~~~~~~~ In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const std::string&, const std::string&, std::string&, std::string&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:40:33: warning: unused parameter 'config' [-Wunused-parameter] 40 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const boost::logic::tribool&, const boost::logic::tribool&, boost::logic::tribool&, boost::logic::tribool&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 16%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const std::string&, const std::string&, std::string&, std::string&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:40:33: warning: unused parameter 'config' [-Wunused-parameter] 40 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const boost::logic::tribool&, const boost::logic::tribool&, boost::logic::tribool&, boost::logic::tribool&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:27380: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl: In function 'const pwiz::cv::CVTermInfo& pwiz::cv::cvTermInfo(const char*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl:103:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 103 | for (int o=0;o(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 17%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp [ 18%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp [ 20%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp [ 21%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp [ 22%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK 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/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp [ 23%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp [ 25%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp [ 26%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp [ 27%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp [ 28%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 30%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 114 | } else if (init == mask) { | ~~~~~^~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:27: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here 346 | long long extrapol; | ^~~~~~~~ In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 31%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] 121 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] 162 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] 356 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:133:57: warning: unused parameter 'head' [-Wunused-parameter] 133 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:136:52: warning: unused parameter 'config' [-Wunused-parameter] 136 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzXML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:201:69: warning: unused parameter 'filename' [-Wunused-parameter] 201 | PWIZ_API_DECL std::string Reader_mzXML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzXML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:216:58: warning: unused parameter 'head' [-Wunused-parameter] 216 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:219:53: warning: unused parameter 'config' [-Wunused-parameter] 219 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MGF::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:267:86: warning: unused parameter 'head' [-Wunused-parameter] 267 | PWIZ_API_DECL std::string Reader_MGF::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:273:51: warning: unused parameter 'head' [-Wunused-parameter] 273 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:276:51: warning: unused parameter 'config' [-Wunused-parameter] 276 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:296:51: warning: unused parameter 'config' [-Wunused-parameter] 296 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MSn::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:307:86: warning: unused parameter 'head' [-Wunused-parameter] 307 | PWIZ_API_DECL std::string Reader_MSn::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:317:51: warning: unused parameter 'head' [-Wunused-parameter] 317 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:320:51: warning: unused parameter 'config' [-Wunused-parameter] 320 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:353:51: warning: unused parameter 'config' [-Wunused-parameter] 353 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_BTDX::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:364:63: warning: unused parameter 'filename' [-Wunused-parameter] 364 | PWIZ_API_DECL std::string Reader_BTDX::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:380:52: warning: unused parameter 'head' [-Wunused-parameter] 380 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:383:52: warning: unused parameter 'config' [-Wunused-parameter] 383 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:410:52: warning: unused parameter 'config' [-Wunused-parameter] 410 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mz5::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:429:62: warning: unused parameter 'filename' [-Wunused-parameter] 429 | PWIZ_API_DECL std::string Reader_mz5::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:462:51: warning: unused parameter 'filename' [-Wunused-parameter] 462 | PWIZ_API_DECL void Reader_mz5::read(const string& filename, | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:463:51: warning: unused parameter 'head' [-Wunused-parameter] 463 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:464:45: warning: unused parameter 'result' [-Wunused-parameter] 464 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:465:41: warning: unused parameter 'runIndex' [-Wunused-parameter] 465 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:466:51: warning: unused parameter 'config' [-Wunused-parameter] 466 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:488:51: warning: unused parameter 'config' [-Wunused-parameter] 488 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzMLb::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:507:64: warning: unused parameter 'filename' [-Wunused-parameter] 507 | PWIZ_API_DECL std::string Reader_mzMLb::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzMLb::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:532:58: warning: unused parameter 'filename' [-Wunused-parameter] 532 | PWIZ_API_DECL void Reader_mzMLb::read(const std::string& filename, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:533:24: warning: unused parameter 'head' [-Wunused-parameter] 533 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:534:13: warning: unused parameter 'result' [-Wunused-parameter] 534 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:535:9: warning: unused parameter 'runIndex' [-Wunused-parameter] 535 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Exception.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:28: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ | ^ [ 32%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] 131 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] 215 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] 243 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] 286 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] 306 | virtual Status endElement(const std::string& name, stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] 704 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] 705 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] 713 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] 739 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] 757 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] 781 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] 782 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] 799 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] 800 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] 136 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] 195 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] 267 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] 504 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] 505 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] 697 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] 698 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] 970 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] 86 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] 87 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] 95 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] 120 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] 165 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] 1083 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] 1359 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] 1360 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] 3087 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] 3335 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here 2132 | readMzMLbBinaryDataArray(this->integerDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 33%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp [ 35%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 36%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) | ~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] 121 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] 162 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] 356 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here 131 | size_t byteCount; | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here 132 | const void* byteBuffer; | ^~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp [ 40%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp [ 42%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ | ^ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] 131 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] 215 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] 243 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] 286 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] 306 | virtual Status endElement(const std::string& name, stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] 704 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] 705 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] 713 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] 739 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] 757 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] 781 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] 782 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] 799 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] 800 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ [ 46%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, from /usr/include/c++/15/memory:68, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] 278 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 50%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] 1037 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] 1166 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] 1247 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] 1295 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp [ 52%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 53%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here 131 | size_t byteCount; | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here 132 | const void* byteBuffer; | ^~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 55%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ [ 56%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:133:57: warning: unused parameter 'head' [-Wunused-parameter] 133 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:136:52: warning: unused parameter 'config' [-Wunused-parameter] 136 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzXML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:201:69: warning: unused parameter 'filename' [-Wunused-parameter] 201 | PWIZ_API_DECL std::string Reader_mzXML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzXML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:216:58: warning: unused parameter 'head' [-Wunused-parameter] 216 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:219:53: warning: unused parameter 'config' [-Wunused-parameter] 219 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MGF::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:267:86: warning: unused parameter 'head' [-Wunused-parameter] 267 | PWIZ_API_DECL std::string Reader_MGF::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:273:51: warning: unused parameter 'head' [-Wunused-parameter] 273 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:276:51: warning: unused parameter 'config' [-Wunused-parameter] 276 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:296:51: warning: unused parameter 'config' [-Wunused-parameter] 296 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MSn::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:307:86: warning: unused parameter 'head' [-Wunused-parameter] 307 | PWIZ_API_DECL std::string Reader_MSn::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:317:51: warning: unused parameter 'head' [-Wunused-parameter] 317 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:320:51: warning: unused parameter 'config' [-Wunused-parameter] 320 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:353:51: warning: unused parameter 'config' [-Wunused-parameter] 353 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_BTDX::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:364:63: warning: unused parameter 'filename' [-Wunused-parameter] 364 | PWIZ_API_DECL std::string Reader_BTDX::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:380:52: warning: unused parameter 'head' [-Wunused-parameter] 380 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:383:52: warning: unused parameter 'config' [-Wunused-parameter] 383 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:410:52: warning: unused parameter 'config' [-Wunused-parameter] 410 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mz5::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:429:62: warning: unused parameter 'filename' [-Wunused-parameter] 429 | PWIZ_API_DECL std::string Reader_mz5::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:462:51: warning: unused parameter 'filename' [-Wunused-parameter] 462 | PWIZ_API_DECL void Reader_mz5::read(const string& filename, | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:463:51: warning: unused parameter 'head' [-Wunused-parameter] 463 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:464:45: warning: unused parameter 'result' [-Wunused-parameter] 464 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:465:41: warning: unused parameter 'runIndex' [-Wunused-parameter] 465 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:466:51: warning: unused parameter 'config' [-Wunused-parameter] 466 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:488:51: warning: unused parameter 'config' [-Wunused-parameter] 488 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzMLb::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:507:64: warning: unused parameter 'filename' [-Wunused-parameter] 507 | PWIZ_API_DECL std::string Reader_mzMLb::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzMLb::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:532:58: warning: unused parameter 'filename' [-Wunused-parameter] 532 | PWIZ_API_DECL void Reader_mzMLb::read(const std::string& filename, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:533:24: warning: unused parameter 'head' [-Wunused-parameter] 533 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:534:13: warning: unused parameter 'result' [-Wunused-parameter] 534 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:535:9: warning: unused parameter 'runIndex' [-Wunused-parameter] 535 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Exception.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:28: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] 136 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] 195 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] 267 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] 504 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] 505 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] 697 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] 698 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] 970 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] 1083 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] 1359 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] 1360 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] 3087 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] 3335 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here 2132 | readMzMLbBinaryDataArray(this->integerDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 58%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 60%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] 86 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] 87 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] 95 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] 120 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] 165 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] 337 | mru_list taskMRU_; | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] 334 | bool continueOnError_; | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 61%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) | ~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ [ 62%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 63%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp [ 65%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 67%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp [ 68%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, from /usr/include/c++/15/memory:68, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 70%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp [ 71%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 72%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp [ 73%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp [ 75%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp [ 76%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 77%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] 549 | if (inCDATA) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here 501 | bool inCDATA; | ^~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~ [ 78%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] 278 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 80%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp [ 81%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] 303 | force_close_handles_to_filepath(const std::string &filepath, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] 304 | bool closeMemoryMappedSections) noexcept(true) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] 1037 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] 1166 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] 1247 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] 1295 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 82%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp [ 83%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp [ 85%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp [ 87%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp [ 88%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 90%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 91%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp [ 92%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] 337 | mru_list taskMRU_; | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] 334 | bool continueOnError_; | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) | ^~~~ [ 93%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 95%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp [ 96%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 97%] Linking CXX static library libpwizlite.a cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/pwizlite-static.dir/cmake_clean_target.cmake cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-static.dir/link.txt --verbose=1 In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /usr/bin/ar qc libpwizlite.a "CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" 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-DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] 303 | force_close_handles_to_filepath(const std::string &filepath, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] 304 | bool closeMemoryMappedSections) noexcept(true) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] 549 | if (inCDATA) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here 501 | bool inCDATA; | ^~~~~~~ [100%] Linking CXX shared library libpwizlite.so cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-shared.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libz.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/pwizlite-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libpwizlite.so.3 -o libpwizlite.so.3.0.10 "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o" /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0 /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0 cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libpwizlite.so.3.0.10 libpwizlite.so.3 libpwizlite.so make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [100%] Built target pwizlite-shared make[2]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' dh_auto_test -O--build-system=cmake create-stamp debian/debhelper-build-stamp dh_testroot -O--build-system=cmake dh_prep -O--build-system=cmake dh_auto_install -O--build-system=cmake cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libpwizlite-3.0.10/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libpwizlite-3.0.10 -B/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "release" -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/pwizlite/FindPwizLite.cmake -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/pwizlite/PwizLiteConfig.cmake -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/libpwizlite.pc -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.so.3.0.10 -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.so.3 -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.a make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' dh_install -O--build-system=cmake dh_installdocs -O--build-system=cmake dh_installchangelogs -O--build-system=cmake dh_installman -O--build-system=cmake dh_installsystemduser -O--build-system=cmake dh_lintian -O--build-system=cmake dh_perl -O--build-system=cmake dh_link -O--build-system=cmake dh_strip_nondeterminism -O--build-system=cmake dh_compress -O--build-system=cmake dh_fixperms -O--build-system=cmake dh_missing -O--build-system=cmake dh_dwz -a -O--build-system=cmake dh_strip -a -O--build-system=cmake dh_makeshlibs -a -O--build-system=cmake dh_shlibdeps -a -O--build-system=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -O--build-system=cmake dh_gencontrol -O--build-system=cmake dh_md5sums -O--build-system=cmake dh_builddeb -O--build-system=cmake dpkg-deb: building package 'libpwizlite-dev' in '../libpwizlite-dev_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64-dbgsym' in '../libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64' in '../libpwizlite3t64_3.0.10-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libpwizlite_3.0.10-1_arm64.buildinfo dpkg-genchanges --build=binary -O../libpwizlite_3.0.10-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3561100 and its subdirectories I: Current time: Wed Oct 21 10:01:45 -12 2026 I: pbuilder-time-stamp: 1792620105 Wed Oct 21 22:01:45 UTC 2026 I: Signing ./b1/libpwizlite_3.0.10-1_arm64.buildinfo as libpwizlite_3.0.10-1_arm64.buildinfo.asc Wed Oct 21 22:01:45 UTC 2026 I: Signed ./b1/libpwizlite_3.0.10-1_arm64.buildinfo as ./b1/libpwizlite_3.0.10-1_arm64.buildinfo.asc Wed Oct 21 22:01:45 UTC 2026 - build #1 for libpwizlite/forky/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Wed Oct 21 22:01:45 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-gR6X0REs, removing. /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 15:39 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 15:34 b2 -rw-rw-r-- 1 jenkins jenkins 2257 Sep 8 11:01 libpwizlite_3.0.10-1.dsc -rw------- 1 jenkins jenkins 3397 Sep 18 15:34 rbuildlog.BIEayob /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1: total 15632 -rw-r--r-- 1 jenkins jenkins 586422 Sep 18 15:38 build.log -rw-r--r-- 1 jenkins jenkins 1193108 Sep 18 15:38 libpwizlite-dev_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 12517276 Sep 18 15:38 libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 807176 Sep 18 15:38 libpwizlite3t64_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 8912 Sep 18 15:38 libpwizlite_3.0.10-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2257 Sep 18 15:38 libpwizlite_3.0.10-1.dsc -rw-r--r-- 1 jenkins jenkins 7797 Sep 18 15:38 libpwizlite_3.0.10-1_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 8679 Sep 18 15:38 libpwizlite_3.0.10-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2296 Sep 18 15:38 libpwizlite_3.0.10-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 2000 Sep 18 15:38 libpwizlite_3.0.10-1_source.changes -rw-r--r-- 1 jenkins jenkins 824516 Sep 18 15:39 libpwizlite_3.0.10.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2: total 0 Thu Sep 18 15:39:01 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Oct 21 09:58:02 -12 2026 I: pbuilder-time-stamp: 1792619882 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libpwizlite_3.0.10-1.dsc] I: copying [./libpwizlite_3.0.10.orig.tar.gz] I: copying [./libpwizlite_3.0.10-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libpwizlite_3.0.10-1.dsc: no acceptable signature found dpkg-source: info: extracting libpwizlite in libpwizlite-3.0.10 dpkg-source: info: unpacking libpwizlite_3.0.10.orig.tar.gz dpkg-source: info: unpacking libpwizlite_3.0.10-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3561100/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='5e180ef467394b67ab8b6031bba6baa1' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3561100' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_QxHw --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1 --logfile b1/build.log libpwizlite_3.0.10-1.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3561100/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, dh-exec, dpkg-dev (>= 1.18.25), libboost1.88-dev, libboost-thread1.88-dev, libboost-filesystem1.88-dev, libboost-iostreams1.88-dev, libboost-chrono1.88-dev, libboost-random1.88-dev, zlib1g-dev, python3-docutils dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on libboost1.88-dev; however: Package libboost1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread1.88-dev; however: Package libboost-thread1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem1.88-dev; however: Package libboost-filesystem1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams1.88-dev; however: Package libboost-iostreams1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono1.88-dev; however: Package libboost-chrono1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-random1.88-dev; however: Package libboost-random1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-docutils; however: Package python3-docutils is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} gcc-14-base{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-atomic1.88-dev{a} libboost-atomic1.88.0{a} libboost-chrono1.88-dev{a} libboost-chrono1.88.0{a} libboost-date-time1.88-dev{a} libboost-date-time1.88.0{a} libboost-filesystem1.88-dev{a} libboost-filesystem1.88.0{a} libboost-iostreams1.88-dev{a} libboost-iostreams1.88.0{a} libboost-random1.88-dev{a} libboost-random1.88.0{a} libboost-regex1.88-dev{a} libboost-regex1.88.0{a} libboost-serialization1.88-dev{a} libboost-serialization1.88.0{a} libboost-system1.88-dev{a} libboost-system1.88.0{a} libboost-thread1.88-dev{a} libboost-thread1.88.0{a} libboost1.88-dev{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgcc-14-dev{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu-dev{a} libicu76{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libstdc++-14-dev{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-docutils{a} python3-minimal{a} python3-roman{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-pil python3-pygments wget 0 packages upgraded, 105 newly installed, 0 to remove and 0 not upgraded. Need to get 78.4 MB of archives. After unpacking 488 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.7-1 [857 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.7-1 [2001 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.7-1 [1895 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 procps arm64 2:4.0.4-9 [871 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-3 [98.1 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 cmake-data all 4.1.1+really3.31.6-1 [2268 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 libarchive13t64 arm64 3.7.4-4+b1 [323 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 40 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libnghttp3-9 arm64 1.11.0-1 [66.7 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libcurl4t64 arm64 8.16.0-1 [388 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libjsoncpp26 arm64 1.9.6-4 [73.2 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 librhash1 arm64 1.4.6-1 [131 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 libuv1t64 arm64 1.51.0-2 [150 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 cmake arm64 4.1.1+really3.31.6-1 [9905 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.26 [91.8 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 66 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 debhelper all 13.26 [939 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 dh-exec arm64 0.30+b1 [25.8 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 xml-core all 0.19 [20.1 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 gcc-14-base arm64 14.3.0-8 [52.1 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libicu76 arm64 76.1-4 [9524 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 icu-devtools arm64 76.1-4 [200 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libgcc-14-dev arm64 14.3.0-8 [2364 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libstdc++-14-dev arm64 14.3.0-8 [2567 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 libboost1.88-dev arm64 1.88.0-1.4 [11.2 MB] Get: 82 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.88.0 arm64 1.88.0-1.4 [235 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.88-dev arm64 1.88.0-1.4 [236 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.88.0 arm64 1.88.0-1.4 [241 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.88-dev arm64 1.88.0-1.4 [247 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.88.0 arm64 1.88.0-1.4 [232 kB] Get: 87 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.88.0 arm64 1.88.0-1.4 [335 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.88-dev arm64 1.88.0-1.4 [383 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.88-dev arm64 1.88.0-1.4 [240 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.88.0 arm64 1.88.0-1.4 [279 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libboost-system1.88.0 arm64 1.88.0-1.4 [232 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libboost-system1.88-dev arm64 1.88.0-1.4 [233 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.88-dev arm64 1.88.0-1.4 [300 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libboost-random1.88.0 arm64 1.88.0-1.4 [239 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libboost-random1.88-dev arm64 1.88.0-1.4 [242 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libboost-regex1.88.0 arm64 1.88.0-1.4 [320 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libicu-dev arm64 76.1-4 [10.6 MB] Get: 98 http://deb.debian.org/debian forky/main arm64 libboost-regex1.88-dev arm64 1.88.0-1.4 [340 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.88.0 arm64 1.88.0-1.4 [255 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.88-dev arm64 1.88.0-1.4 [265 kB] Get: 101 http://deb.debian.org/debian forky/main arm64 libboost-thread1.88.0 arm64 1.88.0-1.4 [264 kB] Get: 102 http://deb.debian.org/debian forky/main arm64 libboost-thread1.88-dev arm64 1.88.0-1.4 [274 kB] Get: 103 http://deb.debian.org/debian forky/main arm64 python3-roman all 5.1-1 [11.0 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 105 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 78.4 MB in 4s (19.5 MB/s) Preconfiguring packages ... 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I: Building the package I: Running cd /build/reproducible-path/libpwizlite-3.0.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libpwizlite_3.0.10-1_source.changes dpkg-buildpackage: info: source package libpwizlite dpkg-buildpackage: info: source version 3.0.10-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --build-system=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10' rm -f debian/libpwizlite.3 rm -rf debian/includes rm -rf obj-aarch64-linux-gnu dh_clean make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10' dh_autoreconf_clean -O--build-system=cmake dh_clean -O--build-system=cmake debian/rules binary dh binary --build-system=cmake dh_update_autotools_config -O--build-system=cmake dh_autoreconf -O--build-system=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10' dh_auto_configure -- \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DCMAKE_BUILD_TYPE=release cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=release .. -- The CXX compiler identification is GNU 15.2.0 -- The C compiler identification is GNU 15.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- CMAKE_LIBRARY_ARCHITECTURE: aarch64-linux-gnu -- Set CMAKE_INSTALL_PREFIX to /usr -- Install directory prefix: /usr -- CMAKE_INSTALL_FULL_LIBDIR: /usr/lib/aarch64-linux-gnu -- CMAKE_INSTALL_FULL_INCLUDEDIR: /usr/include Configuring build for project libpwizlite -- Set CMAKE_CXX_STANDARD to 17 (required) -- CMAKE_CXX_COMPILER: /usr/bin/c++ -- Setting definition -Wno-unknown-pragmas. -- Setting definition -Wall. -- Setting definition -Wextra. -- CMAKE_SOURCE_DIR: /build/reproducible-path/libpwizlite-3.0.10 UNIX non APPLE environment Please run the configuration like this: cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE=Debug ../development -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.3.1") CMake Warning (dev) at CMakeStuff/toolchains/unix-toolchain.cmake:12 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:104 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.88.0/BoostConfig.cmake (found version "1.88.0") found components: iostreams thread filesystem chrono -- Starting configuration of libpwizlite -- The build toolchain is: Linux  -- CMAKE_CURRENT_BINARY_DIR: /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu -- CMAKE_BUILD_TYPE: release. -- Adding subdirectory src for PROJECT: libpwizlite -- Setting -Wall. -- Boost_LIBRARIES found 1_88 -- Boost_INCLUDES: /usr/include -- Boost_LIB_DIRS: /usr/lib/aarch64-linux-gnu STATUS: Now managing the CPack process Including file : /build/reproducible-path/libpwizlite-3.0.10/CMakeStuff/targz-source-package-creation.cmake After file inclusion CPACK_SOURCE_IGNORE_FILES: \\.cache/;.*\\.tar\\.gz;moc_.*cxx;\\.#.*;.*\\.aux;.*\\.bbl;.*\\.blg;.*\\.log;.*\\.out;.*\\.toc;/devel_archives/;/doc\\/html/;/doc\\/latex/;Makefile;install_manifest.txt;CMakeCache.txt;CPackConfig.cmake;CPackSourceConfig.cmake;/CMakeFiles/;/_CPack_Packages/;/Debug/;/Release/;/tests/;/\\.externalToolBuilders/;/\\.git/;/\\.kdev4/;development.kdev4;/\\.settings/;Makefile;\\.cdtbuild;\\.cdtproject;\\.project;\\.cproject;/win32/;/win64/;/build/;/buildwin64/;/cbuild/;/wbuild/;/bin/;/buildmingw/;test\\.ods;buildwin32.cmd;libpwizlite.so;OpenDocument-v1.0-os.pdf;debian/;compile_commands.json -- Configuring done (1.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu rst2man debian/libpwizlite.3.rst > debian/libpwizlite.3 sh debian/make-included-headers-hierarchy.sh baseName: Filesystem.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Filesystem.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Filesystem.hpp' baseName: virtual_map.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/virtual_map.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/virtual_map.hpp' baseName: unit.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/unit.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/unit.hpp' baseName: shared_map.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/shared_map.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/shared_map.hpp' baseName: random_access_compressed_ifstream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/random_access_compressed_ifstream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/random_access_compressed_ifstream.hpp' baseName: optimized_lexical_cast.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/optimized_lexical_cast.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/optimized_lexical_cast.hpp' baseName: mru_list.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/mru_list.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/mru_list.hpp' baseName: endian.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/endian.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/endian.hpp' baseName: cpp_cli_utilities.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/cpp_cli_utilities.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/cpp_cli_utilities.hpp' baseName: automation_vector.h dirName: pwiz/utility/misc 'pwiz/utility/misc/automation_vector.h' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/automation_vector.h' baseName: almost_equal.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/almost_equal.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/almost_equal.hpp' baseName: VendorReaderTestHarness.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/VendorReaderTestHarness.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/VendorReaderTestHarness.hpp' baseName: Timer.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Timer.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Timer.hpp' baseName: TabReader.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/TabReader.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/TabReader.hpp' baseName: String.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/String.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/String.hpp' baseName: Stream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Stream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Stream.hpp' baseName: Std.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Std.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Std.hpp' baseName: Singleton.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Singleton.hpp' baseName: SHA1_ostream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1_ostream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1_ostream.hpp' baseName: SHA1Calculator.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1Calculator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1Calculator.hpp' baseName: SHA1.h dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1.h' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1.h' baseName: Once.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Once.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Once.hpp' baseName: MSIHandler.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/MSIHandler.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/MSIHandler.hpp' baseName: IterationListener.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/IterationListener.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/IterationListener.hpp' baseName: IntegerSet.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/IntegerSet.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/IntegerSet.hpp' baseName: Image.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Image.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Image.hpp' baseName: Export.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Export.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Export.hpp' baseName: Exception.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Exception.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Exception.hpp' baseName: Environment.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Environment.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Environment.hpp' baseName: DateTime.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/DateTime.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/DateTime.hpp' baseName: Container.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Container.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Container.hpp' baseName: ClickwrapPrompter.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/ClickwrapPrompter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/ClickwrapPrompter.hpp' baseName: CharIndexedVector.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/CharIndexedVector.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/CharIndexedVector.hpp' baseName: COMInitializer.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/COMInitializer.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/COMInitializer.hpp' baseName: BinaryData.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/BinaryData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/BinaryData.hpp' baseName: Base64.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Base64.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Base64.hpp' baseName: XMLWriter.hpp dirName: pwiz/utility/minimxml 'pwiz/utility/minimxml/XMLWriter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/minimxml/XMLWriter.hpp' baseName: SAXParser.hpp dirName: pwiz/utility/minimxml 'pwiz/utility/minimxml/SAXParser.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/minimxml/SAXParser.hpp' baseName: round.hpp dirName: pwiz/utility/math 'pwiz/utility/math/round.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/round.hpp' baseName: qr.hpp dirName: pwiz/utility/math 'pwiz/utility/math/qr.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/qr.hpp' baseName: erf.hpp dirName: pwiz/utility/math 'pwiz/utility/math/erf.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/erf.hpp' baseName: Types.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Types.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Types.hpp' baseName: Stats.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Stats.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Stats.hpp' baseName: Parabola.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Parabola.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Parabola.hpp' baseName: OrderedPair.hpp dirName: pwiz/utility/math 'pwiz/utility/math/OrderedPair.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/OrderedPair.hpp' baseName: MatrixInverse.hpp dirName: pwiz/utility/math 'pwiz/utility/math/MatrixInverse.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/MatrixInverse.hpp' baseName: MatchedFilter.hpp dirName: pwiz/utility/math 'pwiz/utility/math/MatchedFilter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/MatchedFilter.hpp' baseName: LinearSolver.hpp dirName: pwiz/utility/math 'pwiz/utility/math/LinearSolver.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/LinearSolver.hpp' baseName: LinearLeastSquares.hpp dirName: pwiz/utility/math 'pwiz/utility/math/LinearLeastSquares.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/LinearLeastSquares.hpp' baseName: HouseholderQR.hpp dirName: pwiz/utility/math 'pwiz/utility/math/HouseholderQR.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/HouseholderQR.hpp' baseName: determinebinwidth.hpp dirName: pwiz/utility/findmf/base/resample/utilities 'pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp' baseName: masscomparefunctors.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/masscomparefunctors.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/masscomparefunctors.hpp' baseName: determinebinwidth.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/determinebinwidth.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/determinebinwidth.hpp' baseName: breakspec.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/breakspec.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/breakspec.hpp' baseName: bin1d.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/bin1d.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/bin1d.hpp' baseName: preparedata.hpp dirName: pwiz/utility/findmf/base/filter/utilities 'pwiz/utility/findmf/base/filter/utilities/preparedata.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/utilities/preparedata.hpp' baseName: gauss.hpp dirName: pwiz/utility/findmf/base/filter/utilities 'pwiz/utility/findmf/base/filter/utilities/gauss.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/utilities/gauss.hpp' baseName: gaussfilter.hpp dirName: pwiz/utility/findmf/base/filter 'pwiz/utility/findmf/base/filter/gaussfilter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/gaussfilter.hpp' baseName: filter.hpp dirName: pwiz/utility/findmf/base/filter 'pwiz/utility/findmf/base/filter/filter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/filter.hpp' baseName: interpolation.hpp dirName: pwiz/utility/findmf/base/base/utilities 'pwiz/utility/findmf/base/base/utilities/interpolation.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/utilities/interpolation.hpp' baseName: base.hpp dirName: pwiz/utility/findmf/base/base/utilities 'pwiz/utility/findmf/base/base/utilities/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/utilities/base.hpp' baseName: scale.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/scale.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/scale.hpp' baseName: interpolate.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/interpolate.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/interpolate.hpp' baseName: diff.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/diff.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/diff.hpp' baseName: copyif.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/copyif.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/copyif.hpp' baseName: constants.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/constants.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/constants.hpp' baseName: base.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/base.hpp' baseName: MzMobilityWindow.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/MzMobilityWindow.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/MzMobilityWindow.hpp' baseName: MZTolerance.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/MZTolerance.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/MZTolerance.hpp' baseName: IsotopeTable.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeTable.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeTable.hpp' baseName: IsotopeEnvelopeEstimator.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp' baseName: IsotopeCalculator.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeCalculator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeCalculator.hpp' baseName: Ion.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/Ion.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/Ion.hpp' baseName: ChemistryData.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/ChemistryData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/ChemistryData.hpp' baseName: Chemistry.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/Chemistry.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/Chemistry.hpp' baseName: Connection_mzMLb.hpp dirName: pwiz/data/msdata/mzmlb 'pwiz/data/msdata/mzmlb/Connection_mzMLb.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/mzmlb/Connection_mzMLb.hpp' baseName: examples.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/examples.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/examples.hpp' baseName: Version.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Version.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Version.hpp' baseName: TextWriter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/TextWriter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/TextWriter.hpp' baseName: SpectrumWorkerThreads.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumWorkerThreads.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumWorkerThreads.hpp' baseName: SpectrumList_mzXML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mzXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mzXML.hpp' baseName: SpectrumList_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mzML.hpp' baseName: SpectrumList_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mz5.hpp' baseName: SpectrumList_MSn.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_MSn.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_MSn.hpp' baseName: SpectrumList_MGF.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_MGF.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_MGF.hpp' baseName: SpectrumList_BTDX.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_BTDX.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_BTDX.hpp' baseName: SpectrumListWrapper.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListWrapper.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListWrapper.hpp' baseName: SpectrumListCache.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListCache.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListCache.hpp' baseName: SpectrumListBase.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListBase.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListBase.hpp' baseName: SpectrumIterator.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumIterator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumIterator.hpp' baseName: SpectrumInfo.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumInfo.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumInfo.hpp' baseName: Serializer_mzXML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mzXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mzXML.hpp' baseName: Serializer_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mzML.hpp' baseName: Serializer_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mz5.hpp' baseName: Serializer_MSn.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_MSn.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_MSn.hpp' baseName: Serializer_MGF.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_MGF.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_MGF.hpp' baseName: SHA1OutputObserver.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SHA1OutputObserver.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SHA1OutputObserver.hpp' baseName: References.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/References.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/References.hpp' baseName: Reader.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Reader.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Reader.hpp' baseName: RAMPAdapter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/RAMPAdapter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/RAMPAdapter.hpp' baseName: MemoryMRUCache.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MemoryMRUCache.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MemoryMRUCache.hpp' baseName: MSNumpress.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSNumpress.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSNumpress.hpp' baseName: MSDataMerger.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSDataMerger.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSDataMerger.hpp' baseName: MSDataFile.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSDataFile.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSDataFile.hpp' baseName: MSData.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSData.hpp' baseName: LegacyAdapter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/LegacyAdapter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/LegacyAdapter.hpp' baseName: Index_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Index_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Index_mzML.hpp' baseName: IO.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/IO.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/IO.hpp' baseName: Diff.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Diff.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Diff.hpp' baseName: DefaultReaderList.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/DefaultReaderList.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/DefaultReaderList.hpp' baseName: ChromatogramList_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramList_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramList_mzML.hpp' baseName: ChromatogramList_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramList_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramList_mz5.hpp' baseName: ChromatogramListBase.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramListBase.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramListBase.hpp' baseName: BinaryDataEncoder.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/BinaryDataEncoder.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/BinaryDataEncoder.hpp' baseName: SampleDatum.hpp dirName: pwiz/data/misc 'pwiz/data/misc/SampleDatum.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/SampleDatum.hpp' baseName: PeakData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/PeakData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/PeakData.hpp' baseName: MinimumPepXML.hpp dirName: pwiz/data/misc 'pwiz/data/misc/MinimumPepXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/MinimumPepXML.hpp' baseName: FrequencyDataTestData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/FrequencyDataTestData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/FrequencyDataTestData.hpp' baseName: FrequencyData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/FrequencyData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/FrequencyData.hpp' baseName: CalibrationParameters.hpp dirName: pwiz/data/misc 'pwiz/data/misc/CalibrationParameters.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/CalibrationParameters.hpp' baseName: obo.hpp dirName: pwiz/data/common 'pwiz/data/common/obo.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/obo.hpp' baseName: diff_std.hpp dirName: pwiz/data/common 'pwiz/data/common/diff_std.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/diff_std.hpp' baseName: cv.hpp dirName: pwiz/data/common 'pwiz/data/common/cv.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/cv.hpp' baseName: Unimod.hpp dirName: pwiz/data/common 'pwiz/data/common/Unimod.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/Unimod.hpp' baseName: ParamTypes.hpp dirName: pwiz/data/common 'pwiz/data/common/ParamTypes.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/ParamTypes.hpp' baseName: MemoryIndex.hpp dirName: pwiz/data/common 'pwiz/data/common/MemoryIndex.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/MemoryIndex.hpp' baseName: Index.hpp dirName: pwiz/data/common 'pwiz/data/common/Index.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/Index.hpp' baseName: CVTranslator.hpp dirName: pwiz/data/common 'pwiz/data/common/CVTranslator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/CVTranslator.hpp' baseName: BinaryIndexStream.hpp dirName: pwiz/data/common 'pwiz/data/common/BinaryIndexStream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/BinaryIndexStream.hpp' baseName: SpectrumList_Demux.hpp dirName: pwiz/analysis/spectrum_processing 'pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp' baseName: DemuxDataProcessingStrings.hpp dirName: pwiz/analysis/demux 'pwiz/analysis/demux/DemuxDataProcessingStrings.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/analysis/demux/DemuxDataProcessingStrings.hpp' baseName: Version.hpp dirName: pwiz 'pwiz/Version.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/Version.hpp' baseName: thread_specific_singleton.hpp dirName: boost/utility 'boost/utility/thread_specific_singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/thread_specific_singleton.hpp' baseName: singleton.hpp dirName: boost/utility 'boost/utility/singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/singleton.hpp' baseName: mutexed_singleton.hpp dirName: boost/utility 'boost/utility/mutexed_singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/mutexed_singleton.hpp' baseName: singleton_manager.hpp dirName: boost/utility/detail 'boost/utility/detail/singleton_manager.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/singleton_manager.hpp' baseName: restricted.hpp dirName: boost/utility/detail 'boost/utility/detail/restricted.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/restricted.hpp' baseName: member_dereference.hpp dirName: boost/utility/detail 'boost/utility/detail/member_dereference.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/member_dereference.hpp' baseName: windows.hpp dirName: boost/nowide 'boost/nowide/windows.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/windows.hpp' baseName: system.hpp dirName: boost/nowide 'boost/nowide/system.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/system.hpp' baseName: stackstring.hpp dirName: boost/nowide 'boost/nowide/stackstring.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/stackstring.hpp' baseName: iostream.hpp dirName: boost/nowide 'boost/nowide/iostream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/iostream.hpp' baseName: fstream.hpp dirName: boost/nowide 'boost/nowide/fstream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/fstream.hpp' baseName: filebuf.hpp dirName: boost/nowide 'boost/nowide/filebuf.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/filebuf.hpp' baseName: cstdlib.hpp dirName: boost/nowide 'boost/nowide/cstdlib.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cstdlib.hpp' baseName: cstdio.hpp dirName: boost/nowide 'boost/nowide/cstdio.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cstdio.hpp' baseName: convert.hpp dirName: boost/nowide 'boost/nowide/convert.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/convert.hpp' baseName: config.hpp dirName: boost/nowide 'boost/nowide/config.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/config.hpp' baseName: cenv.hpp dirName: boost/nowide 'boost/nowide/cenv.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cenv.hpp' baseName: args.hpp dirName: boost/nowide 'boost/nowide/args.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/args.hpp' baseName: base64.hpp dirName: boost/iostreams/filter 'boost/iostreams/filter/base64.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/iostreams/filter/base64.hpp' baseName: arbitrary_positional_facade.hpp dirName: boost/iostreams 'boost/iostreams/arbitrary_positional_facade.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/iostreams/arbitrary_positional_facade.hpp' baseName: foreach_field.hpp dirName: boost 'boost/foreach_field.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/foreach_field.hpp' baseName: macros.hpp dirName: boost/enum 'boost/enum/macros.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/macros.hpp' baseName: iterator.hpp dirName: boost/enum 'boost/enum/iterator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/iterator.hpp' baseName: bitfield.hpp dirName: boost/enum 'boost/enum/bitfield.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/bitfield.hpp' baseName: base.hpp dirName: boost/enum 'boost/enum/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/base.hpp' baseName: enum.hpp dirName: boost 'boost/enum.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum.hpp' make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10' dh_auto_build -O--build-system=cmake cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libpwizlite-3.0.10 -B/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/depend make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/depend make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libpwizlite-3.0.10 /build/reproducible-path/libpwizlite-3.0.10/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libpwizlite-3.0.10 /build/reproducible-path/libpwizlite-3.0.10/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [ 1%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp [ 2%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp [ 3%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o [ 6%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o [ 5%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o [ 7%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp [ 8%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp [ 10%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp [ 12%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o [ 11%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o [ 13%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp [ 15%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 114 | } else if (init == mask) { | ~~~~~^~~~~~~ In file included from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:27: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here 346 | long long extrapol; | ^~~~~~~~ In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const std::string&, const std::string&, std::string&, std::string&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:40:33: warning: unused parameter 'config' [-Wunused-parameter] 40 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const boost::logic::tribool&, const boost::logic::tribool&, boost::logic::tribool&, boost::logic::tribool&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 16%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const std::string&, const std::string&, std::string&, std::string&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:40:33: warning: unused parameter 'config' [-Wunused-parameter] 40 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const boost::logic::tribool&, const boost::logic::tribool&, boost::logic::tribool&, boost::logic::tribool&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:27380: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl: In function 'const pwiz::cv::CVTermInfo& pwiz::cv::cvTermInfo(const char*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl:103:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 103 | for (int o=0;o(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 17%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp [ 18%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp [ 20%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp [ 21%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp [ 22%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK 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/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp [ 23%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp [ 25%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp [ 26%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp [ 27%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp [ 28%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 30%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 114 | } else if (init == mask) { | ~~~~~^~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:27: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here 346 | long long extrapol; | ^~~~~~~~ In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 31%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] 121 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] 162 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] 356 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:133:57: warning: unused parameter 'head' [-Wunused-parameter] 133 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:136:52: warning: unused parameter 'config' [-Wunused-parameter] 136 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzXML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:201:69: warning: unused parameter 'filename' [-Wunused-parameter] 201 | PWIZ_API_DECL std::string Reader_mzXML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzXML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:216:58: warning: unused parameter 'head' [-Wunused-parameter] 216 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:219:53: warning: unused parameter 'config' [-Wunused-parameter] 219 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MGF::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:267:86: warning: unused parameter 'head' [-Wunused-parameter] 267 | PWIZ_API_DECL std::string Reader_MGF::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:273:51: warning: unused parameter 'head' [-Wunused-parameter] 273 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:276:51: warning: unused parameter 'config' [-Wunused-parameter] 276 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:296:51: warning: unused parameter 'config' [-Wunused-parameter] 296 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MSn::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:307:86: warning: unused parameter 'head' [-Wunused-parameter] 307 | PWIZ_API_DECL std::string Reader_MSn::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:317:51: warning: unused parameter 'head' [-Wunused-parameter] 317 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:320:51: warning: unused parameter 'config' [-Wunused-parameter] 320 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:353:51: warning: unused parameter 'config' [-Wunused-parameter] 353 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_BTDX::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:364:63: warning: unused parameter 'filename' [-Wunused-parameter] 364 | PWIZ_API_DECL std::string Reader_BTDX::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:380:52: warning: unused parameter 'head' [-Wunused-parameter] 380 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:383:52: warning: unused parameter 'config' [-Wunused-parameter] 383 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:410:52: warning: unused parameter 'config' [-Wunused-parameter] 410 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mz5::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:429:62: warning: unused parameter 'filename' [-Wunused-parameter] 429 | PWIZ_API_DECL std::string Reader_mz5::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:462:51: warning: unused parameter 'filename' [-Wunused-parameter] 462 | PWIZ_API_DECL void Reader_mz5::read(const string& filename, | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:463:51: warning: unused parameter 'head' [-Wunused-parameter] 463 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:464:45: warning: unused parameter 'result' [-Wunused-parameter] 464 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:465:41: warning: unused parameter 'runIndex' [-Wunused-parameter] 465 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:466:51: warning: unused parameter 'config' [-Wunused-parameter] 466 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:488:51: warning: unused parameter 'config' [-Wunused-parameter] 488 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzMLb::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:507:64: warning: unused parameter 'filename' [-Wunused-parameter] 507 | PWIZ_API_DECL std::string Reader_mzMLb::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzMLb::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:532:58: warning: unused parameter 'filename' [-Wunused-parameter] 532 | PWIZ_API_DECL void Reader_mzMLb::read(const std::string& filename, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:533:24: warning: unused parameter 'head' [-Wunused-parameter] 533 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:534:13: warning: unused parameter 'result' [-Wunused-parameter] 534 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:535:9: warning: unused parameter 'runIndex' [-Wunused-parameter] 535 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Exception.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:28: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ | ^ [ 32%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] 131 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] 215 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] 243 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] 286 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] 306 | virtual Status endElement(const std::string& name, stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] 704 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] 705 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] 713 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] 739 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] 757 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] 781 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] 782 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] 799 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] 800 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] 136 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] 195 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] 267 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] 504 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] 505 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] 697 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] 698 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] 970 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] 86 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] 87 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] 95 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] 120 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] 165 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] 1083 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] 1359 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] 1360 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] 3087 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] 3335 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here 2132 | readMzMLbBinaryDataArray(this->integerDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 33%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp [ 35%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 36%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) | ~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ [ 37%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] 121 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] 162 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] 356 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here 131 | size_t byteCount; | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here 132 | const void* byteBuffer; | ^~~~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp [ 40%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp [ 42%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ | ^ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] 131 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] 215 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] 243 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] 286 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] 306 | virtual Status endElement(const std::string& name, stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] 704 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] 705 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] 713 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] 739 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] 757 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] 781 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] 782 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] 799 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] 800 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 43%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ [ 46%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, from /usr/include/c++/15/memory:68, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 47%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] 278 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 48%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 50%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] 1037 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] 1166 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] 1247 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] 1295 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 51%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp [ 52%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 53%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here 131 | size_t byteCount; | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here 132 | const void* byteBuffer; | ^~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 55%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ [ 56%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:133:57: warning: unused parameter 'head' [-Wunused-parameter] 133 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:136:52: warning: unused parameter 'config' [-Wunused-parameter] 136 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzXML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:201:69: warning: unused parameter 'filename' [-Wunused-parameter] 201 | PWIZ_API_DECL std::string Reader_mzXML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzXML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:216:58: warning: unused parameter 'head' [-Wunused-parameter] 216 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:219:53: warning: unused parameter 'config' [-Wunused-parameter] 219 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MGF::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:267:86: warning: unused parameter 'head' [-Wunused-parameter] 267 | PWIZ_API_DECL std::string Reader_MGF::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:273:51: warning: unused parameter 'head' [-Wunused-parameter] 273 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:276:51: warning: unused parameter 'config' [-Wunused-parameter] 276 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:296:51: warning: unused parameter 'config' [-Wunused-parameter] 296 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MSn::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:307:86: warning: unused parameter 'head' [-Wunused-parameter] 307 | PWIZ_API_DECL std::string Reader_MSn::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:317:51: warning: unused parameter 'head' [-Wunused-parameter] 317 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:320:51: warning: unused parameter 'config' [-Wunused-parameter] 320 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:353:51: warning: unused parameter 'config' [-Wunused-parameter] 353 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_BTDX::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:364:63: warning: unused parameter 'filename' [-Wunused-parameter] 364 | PWIZ_API_DECL std::string Reader_BTDX::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:380:52: warning: unused parameter 'head' [-Wunused-parameter] 380 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:383:52: warning: unused parameter 'config' [-Wunused-parameter] 383 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:410:52: warning: unused parameter 'config' [-Wunused-parameter] 410 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mz5::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:429:62: warning: unused parameter 'filename' [-Wunused-parameter] 429 | PWIZ_API_DECL std::string Reader_mz5::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:462:51: warning: unused parameter 'filename' [-Wunused-parameter] 462 | PWIZ_API_DECL void Reader_mz5::read(const string& filename, | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:463:51: warning: unused parameter 'head' [-Wunused-parameter] 463 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:464:45: warning: unused parameter 'result' [-Wunused-parameter] 464 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:465:41: warning: unused parameter 'runIndex' [-Wunused-parameter] 465 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:466:51: warning: unused parameter 'config' [-Wunused-parameter] 466 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:488:51: warning: unused parameter 'config' [-Wunused-parameter] 488 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzMLb::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:507:64: warning: unused parameter 'filename' [-Wunused-parameter] 507 | PWIZ_API_DECL std::string Reader_mzMLb::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzMLb::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:532:58: warning: unused parameter 'filename' [-Wunused-parameter] 532 | PWIZ_API_DECL void Reader_mzMLb::read(const std::string& filename, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:533:24: warning: unused parameter 'head' [-Wunused-parameter] 533 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:534:13: warning: unused parameter 'result' [-Wunused-parameter] 534 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:535:9: warning: unused parameter 'runIndex' [-Wunused-parameter] 535 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Exception.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:28: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] 136 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] 195 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] 267 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] 504 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] 505 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] 697 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] 698 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] 970 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] 1083 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] 1359 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] 1360 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] 3087 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] 3335 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here 2132 | readMzMLbBinaryDataArray(this->integerDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ [ 57%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 58%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 60%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] 86 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] 87 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] 95 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] 120 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] 165 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] 337 | mru_list taskMRU_; | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] 334 | bool continueOnError_; | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 61%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) | ~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ [ 62%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 63%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp [ 65%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 66%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 67%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp [ 68%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, from /usr/include/c++/15/memory:68, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 70%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp [ 71%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 72%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp [ 73%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp [ 75%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp [ 76%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 77%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] 549 | if (inCDATA) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here 501 | bool inCDATA; | ^~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~ [ 78%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] 278 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 80%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp [ 81%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] 303 | force_close_handles_to_filepath(const std::string &filepath, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] 304 | bool closeMemoryMappedSections) noexcept(true) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] 1037 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] 1166 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] 1247 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] 1295 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 82%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp [ 83%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp [ 85%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 86%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp [ 87%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp [ 88%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 90%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 91%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp [ 92%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] 337 | mru_list taskMRU_; | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] 334 | bool continueOnError_; | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) | ^~~~ [ 93%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 95%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp [ 96%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 97%] Linking CXX static library libpwizlite.a cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/pwizlite-static.dir/cmake_clean_target.cmake cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-static.dir/link.txt --verbose=1 In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /usr/bin/ar qc libpwizlite.a "CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o" /usr/bin/ranlib libpwizlite.a make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [ 97%] Built target pwizlite-static [ 98%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] 303 | force_close_handles_to_filepath(const std::string &filepath, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] 304 | bool closeMemoryMappedSections) noexcept(true) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] 549 | if (inCDATA) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here 501 | bool inCDATA; | ^~~~~~~ [100%] Linking CXX shared library libpwizlite.so cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-shared.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libz.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/pwizlite-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libpwizlite.so.3 -o libpwizlite.so.3.0.10 "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o" /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0 /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0 cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libpwizlite.so.3.0.10 libpwizlite.so.3 libpwizlite.so make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [100%] Built target pwizlite-shared make[2]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' dh_auto_test -O--build-system=cmake create-stamp debian/debhelper-build-stamp dh_testroot -O--build-system=cmake dh_prep -O--build-system=cmake dh_auto_install -O--build-system=cmake cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libpwizlite-3.0.10/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libpwizlite-3.0.10 -B/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "release" -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/pwizlite/FindPwizLite.cmake -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/pwizlite/PwizLiteConfig.cmake -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/libpwizlite.pc -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.so.3.0.10 -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.so.3 -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.a make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' dh_install -O--build-system=cmake dh_installdocs -O--build-system=cmake dh_installchangelogs -O--build-system=cmake dh_installman -O--build-system=cmake dh_installsystemduser -O--build-system=cmake dh_lintian -O--build-system=cmake dh_perl -O--build-system=cmake dh_link -O--build-system=cmake dh_strip_nondeterminism -O--build-system=cmake dh_compress -O--build-system=cmake dh_fixperms -O--build-system=cmake dh_missing -O--build-system=cmake dh_dwz -a -O--build-system=cmake dh_strip -a -O--build-system=cmake dh_makeshlibs -a -O--build-system=cmake dh_shlibdeps -a -O--build-system=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -O--build-system=cmake dh_gencontrol -O--build-system=cmake dh_md5sums -O--build-system=cmake dh_builddeb -O--build-system=cmake dpkg-deb: building package 'libpwizlite-dev' in '../libpwizlite-dev_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64-dbgsym' in '../libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64' in '../libpwizlite3t64_3.0.10-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libpwizlite_3.0.10-1_arm64.buildinfo dpkg-genchanges --build=binary -O../libpwizlite_3.0.10-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3561100 and its subdirectories I: Current time: Wed Oct 21 10:01:45 -12 2026 I: pbuilder-time-stamp: 1792620105 Thu Sep 18 15:39:02 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Thu Sep 18 15:39:02 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Thu Sep 18 15:39:02 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Thu Sep 18 15:39:02 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-TchyTI' ==================================================================================== Thu Sep 18 15:39:03 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink04-arm64, called using "2 libpwizlite forky /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI 3.0.10-1" as arguments. Thu Sep 18 15:39:03 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-T9l1VsW1" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Sep 18 15:39:03 UTC 2025 I: Downloading source for forky/libpwizlite=3.0.10-1 Reading package lists... NOTICE: 'libpwizlite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/libpwizlite.git Please use: git clone https://salsa.debian.org/debichem-team/libpwizlite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 836 kB of source archives. Get:1 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (dsc) [2257 B] Get:2 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (tar) [825 kB] Get:3 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (diff) [8912 B] Fetched 836 kB in 0s (49.9 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libpwizlite' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/libpwizlite.git Please use: git clone https://salsa.debian.org/debichem-team/libpwizlite.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 836 kB of source archives. Get:1 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (dsc) [2257 B] Get:2 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (tar) [825 kB] Get:3 http://deb.debian.org/debian forky/main libpwizlite 3.0.10-1 (diff) [8912 B] Fetched 836 kB in 0s (49.9 MB/s) Download complete and in download only mode ============================================================================= Re-Building libpwizlite in forky on arm64 on codethink04-arm64 now. Date: Thu Sep 18 16:39:03 BST 2025 Date UTC: Thu Sep 18 15:39:03 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_09n8 + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' libpwizlite = debian-installer -o libpwizlite = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' libpwizlite = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_09n8 --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2 --logfile b2/build.log libpwizlite_3.0.10-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Sep 19 05:39:04 +14 2025 I: pbuilder-time-stamp: 1758209944 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libpwizlite_3.0.10-1.dsc] I: copying [./libpwizlite_3.0.10.orig.tar.gz] I: copying [./libpwizlite_3.0.10-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libpwizlite_3.0.10-1.dsc: no acceptable signature found dpkg-source: info: extracting libpwizlite in libpwizlite-3.0.10 dpkg-source: info: unpacking libpwizlite_3.0.10.orig.tar.gz dpkg-source: info: unpacking libpwizlite_3.0.10-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D01_modify_environment starting debug: Running on codethink04-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Sep 18 15:39 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=forky EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=1125a8d40b58404aa2d673c925416856 LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3594514 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_09n8 --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2 --logfile b2/build.log libpwizlite_3.0.10-1.dsc' SUDO_GID=109 SUDO_HOME=/var/lib/jenkins SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, dh-exec, dpkg-dev (>= 1.18.25), libboost1.88-dev, libboost-thread1.88-dev, libboost-filesystem1.88-dev, libboost-iostreams1.88-dev, libboost-chrono1.88-dev, libboost-random1.88-dev, zlib1g-dev, python3-docutils dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on libboost1.88-dev; however: Package libboost1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread1.88-dev; however: Package libboost-thread1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem1.88-dev; however: Package libboost-filesystem1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams1.88-dev; however: Package libboost-iostreams1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono1.88-dev; however: Package libboost-chrono1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-random1.88-dev; however: Package libboost-random1.88-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-docutils; however: Package python3-docutils is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} gcc-14-base{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-atomic1.88-dev{a} libboost-atomic1.88.0{a} libboost-chrono1.88-dev{a} libboost-chrono1.88.0{a} libboost-date-time1.88-dev{a} libboost-date-time1.88.0{a} libboost-filesystem1.88-dev{a} libboost-filesystem1.88.0{a} libboost-iostreams1.88-dev{a} libboost-iostreams1.88.0{a} libboost-random1.88-dev{a} libboost-random1.88.0{a} libboost-regex1.88-dev{a} libboost-regex1.88.0{a} libboost-serialization1.88-dev{a} libboost-serialization1.88.0{a} libboost-system1.88-dev{a} libboost-system1.88.0{a} libboost-thread1.88-dev{a} libboost-thread1.88.0{a} libboost1.88-dev{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgcc-14-dev{a} libgnutls30t64{a} libgssapi-krb5-2{a} libicu-dev{a} libicu76{a} libidn2-0{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libstdc++-14-dev{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-docutils{a} python3-minimal{a} python3-roman{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-pil python3-pygments wget 0 packages upgraded, 105 newly installed, 0 to remove and 0 not upgraded. Need to get 78.4 MB of archives. After unpacking 488 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.1-2 [93.3 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.7-1 [857 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.7-1 [2001 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.7-1 [1895 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 procps arm64 2:4.0.4-9 [871 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-3 [98.1 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 cmake-data all 4.1.1+really3.31.6-1 [2268 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 libarchive13t64 arm64 3.7.4-4+b1 [323 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 40 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libnghttp3-9 arm64 1.11.0-1 [66.7 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libcurl4t64 arm64 8.16.0-1 [388 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libjsoncpp26 arm64 1.9.6-4 [73.2 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 librhash1 arm64 1.4.6-1 [131 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 libuv1t64 arm64 1.51.0-2 [150 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 cmake arm64 4.1.1+really3.31.6-1 [9905 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.26 [91.8 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 66 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 debhelper all 13.26 [939 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 dh-exec arm64 0.30+b1 [25.8 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 sgml-base all 1.31+nmu1 [10.9 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 xml-core all 0.19 [20.1 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 gcc-14-base arm64 14.3.0-8 [52.1 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libicu76 arm64 76.1-4 [9524 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 icu-devtools arm64 76.1-4 [200 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libgcc-14-dev arm64 14.3.0-8 [2364 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libstdc++-14-dev arm64 14.3.0-8 [2567 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 libboost1.88-dev arm64 1.88.0-1.4 [11.2 MB] Get: 82 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.88.0 arm64 1.88.0-1.4 [235 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.88-dev arm64 1.88.0-1.4 [236 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.88.0 arm64 1.88.0-1.4 [241 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.88-dev arm64 1.88.0-1.4 [247 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.88.0 arm64 1.88.0-1.4 [232 kB] Get: 87 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.88.0 arm64 1.88.0-1.4 [335 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.88-dev arm64 1.88.0-1.4 [383 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.88-dev arm64 1.88.0-1.4 [240 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.88.0 arm64 1.88.0-1.4 [279 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libboost-system1.88.0 arm64 1.88.0-1.4 [232 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libboost-system1.88-dev arm64 1.88.0-1.4 [233 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.88-dev arm64 1.88.0-1.4 [300 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libboost-random1.88.0 arm64 1.88.0-1.4 [239 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libboost-random1.88-dev arm64 1.88.0-1.4 [242 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libboost-regex1.88.0 arm64 1.88.0-1.4 [320 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libicu-dev arm64 76.1-4 [10.6 MB] Get: 98 http://deb.debian.org/debian forky/main arm64 libboost-regex1.88-dev arm64 1.88.0-1.4 [340 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.88.0 arm64 1.88.0-1.4 [255 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.88-dev arm64 1.88.0-1.4 [265 kB] Get: 101 http://deb.debian.org/debian forky/main arm64 libboost-thread1.88.0 arm64 1.88.0-1.4 [264 kB] Get: 102 http://deb.debian.org/debian forky/main arm64 libboost-thread1.88-dev arm64 1.88.0-1.4 [274 kB] Get: 103 http://deb.debian.org/debian forky/main arm64 python3-roman all 5.1-1 [11.0 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 105 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 78.4 MB in 0s (168 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.1-2_arm64.deb ... Unpacking libexpat1:arm64 (2.7.1-2) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_arm64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:arm64 (3.13.7-1) ... Setting up libexpat1:arm64 (2.7.1-2) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20354 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_arm64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.3-3_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_arm64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21369 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.7-1_arm64.deb ... Unpacking python3 (3.13.7-1) ... 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Setting up libldap2:arm64 (2.6.10+dfsg-1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up libboost1.88-dev:arm64 (1.88.0-1.4) ... Setting up libboost-atomic1.88-dev:arm64 (1.88.0-1.4) ... Setting up libidn2-0:arm64 (2.3.8-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up icu-devtools (76.1-4) ... Setting up libreadline8t64:arm64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up xml-core (0.19) ... Setting up libboost-chrono1.88-dev:arm64 (1.88.0-1.4) ... Setting up libpython3.13-stdlib:arm64 (3.13.7-1) ... Setting up libicu-dev:arm64 (76.1-4) ... Setting up libpython3-stdlib:arm64 (3.13.7-1) ... Setting up libgnutls30t64:arm64 (3.8.9-3) ... Setting up libboost-serialization1.88-dev:arm64 (1.88.0-1.4) ... Setting up libboost-regex1.88-dev:arm64 (1.88.0-1.4) ... Setting up libboost-system1.88-dev:arm64 (1.88.0-1.4) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libboost-filesystem1.88-dev:arm64 (1.88.0-1.4) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.7-1) ... Setting up libboost-date-time1.88-dev:arm64 (1.88.0-1.4) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-roman (5.1-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Setting up libboost-thread1.88-dev:arm64 (1.88.0-1.4) ... Setting up libboost-random1.88-dev:arm64 (1.88.0-1.4) ... Setting up libcurl4t64:arm64 (8.16.0-1) ... Setting up debhelper (13.26) ... Setting up dh-exec (0.30+b1) ... Setting up libboost-iostreams1.88-dev:arm64 (1.88.0-1.4) ... Setting up cmake (4.1.1+really3.31.6-1) ... Processing triggers for libc-bin (2.41-12) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31+nmu1) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for forky I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/libpwizlite-3.0.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libpwizlite_3.0.10-1_source.changes dpkg-buildpackage: info: source package libpwizlite dpkg-buildpackage: info: source version 3.0.10-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --build-system=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10' rm -f debian/libpwizlite.3 rm -rf debian/includes rm -rf obj-aarch64-linux-gnu dh_clean make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10' dh_autoreconf_clean -O--build-system=cmake dh_clean -O--build-system=cmake debian/rules binary dh binary --build-system=cmake dh_update_autotools_config -O--build-system=cmake dh_autoreconf -O--build-system=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10' dh_auto_configure -- \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DCMAKE_BUILD_TYPE=release cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=release .. -- The CXX compiler identification is GNU 15.2.0 -- The C compiler identification is GNU 15.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- CMAKE_LIBRARY_ARCHITECTURE: aarch64-linux-gnu -- Set CMAKE_INSTALL_PREFIX to /usr -- Install directory prefix: /usr -- CMAKE_INSTALL_FULL_LIBDIR: /usr/lib/aarch64-linux-gnu -- CMAKE_INSTALL_FULL_INCLUDEDIR: /usr/include Configuring build for project libpwizlite -- Set CMAKE_CXX_STANDARD to 17 (required) -- CMAKE_CXX_COMPILER: /usr/bin/c++ -- Setting definition -Wno-unknown-pragmas. -- Setting definition -Wall. -- Setting definition -Wextra. -- CMAKE_SOURCE_DIR: /build/reproducible-path/libpwizlite-3.0.10 UNIX non APPLE environment Please run the configuration like this: cmake -G "Unix Makefiles" -DCMAKE_BUILD_TYPE=Debug ../development -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.3.1") CMake Warning (dev) at CMakeStuff/toolchains/unix-toolchain.cmake:12 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:104 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost: /usr/lib/aarch64-linux-gnu/cmake/Boost-1.88.0/BoostConfig.cmake (found version "1.88.0") found components: iostreams thread filesystem chrono -- Starting configuration of libpwizlite -- The build toolchain is: Linux  -- CMAKE_CURRENT_BINARY_DIR: /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu -- CMAKE_BUILD_TYPE: release. -- Adding subdirectory src for PROJECT: libpwizlite -- Setting -Wall. -- Boost_LIBRARIES found 1_88 -- Boost_INCLUDES: /usr/include -- Boost_LIB_DIRS: /usr/lib/aarch64-linux-gnu STATUS: Now managing the CPack process Including file : /build/reproducible-path/libpwizlite-3.0.10/CMakeStuff/targz-source-package-creation.cmake After file inclusion CPACK_SOURCE_IGNORE_FILES: \\.cache/;.*\\.tar\\.gz;moc_.*cxx;\\.#.*;.*\\.aux;.*\\.bbl;.*\\.blg;.*\\.log;.*\\.out;.*\\.toc;/devel_archives/;/doc\\/html/;/doc\\/latex/;Makefile;install_manifest.txt;CMakeCache.txt;CPackConfig.cmake;CPackSourceConfig.cmake;/CMakeFiles/;/_CPack_Packages/;/Debug/;/Release/;/tests/;/\\.externalToolBuilders/;/\\.git/;/\\.kdev4/;development.kdev4;/\\.settings/;Makefile;\\.cdtbuild;\\.cdtproject;\\.project;\\.cproject;/win32/;/win64/;/build/;/buildwin64/;/cbuild/;/wbuild/;/bin/;/buildmingw/;test\\.ods;buildwin32.cmd;libpwizlite.so;OpenDocument-v1.0-os.pdf;debian/;compile_commands.json -- Configuring done (0.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu rst2man debian/libpwizlite.3.rst > debian/libpwizlite.3 sh debian/make-included-headers-hierarchy.sh baseName: Filesystem.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Filesystem.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Filesystem.hpp' baseName: virtual_map.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/virtual_map.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/virtual_map.hpp' baseName: unit.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/unit.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/unit.hpp' baseName: shared_map.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/shared_map.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/shared_map.hpp' baseName: random_access_compressed_ifstream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/random_access_compressed_ifstream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/random_access_compressed_ifstream.hpp' baseName: optimized_lexical_cast.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/optimized_lexical_cast.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/optimized_lexical_cast.hpp' baseName: mru_list.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/mru_list.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/mru_list.hpp' baseName: endian.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/endian.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/endian.hpp' baseName: cpp_cli_utilities.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/cpp_cli_utilities.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/cpp_cli_utilities.hpp' baseName: automation_vector.h dirName: pwiz/utility/misc 'pwiz/utility/misc/automation_vector.h' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/automation_vector.h' baseName: almost_equal.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/almost_equal.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/almost_equal.hpp' baseName: VendorReaderTestHarness.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/VendorReaderTestHarness.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/VendorReaderTestHarness.hpp' baseName: Timer.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Timer.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Timer.hpp' baseName: TabReader.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/TabReader.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/TabReader.hpp' baseName: String.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/String.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/String.hpp' baseName: Stream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Stream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Stream.hpp' baseName: Std.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Std.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Std.hpp' baseName: Singleton.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Singleton.hpp' baseName: SHA1_ostream.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1_ostream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1_ostream.hpp' baseName: SHA1Calculator.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1Calculator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1Calculator.hpp' baseName: SHA1.h dirName: pwiz/utility/misc 'pwiz/utility/misc/SHA1.h' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/SHA1.h' baseName: Once.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Once.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Once.hpp' baseName: MSIHandler.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/MSIHandler.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/MSIHandler.hpp' baseName: IterationListener.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/IterationListener.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/IterationListener.hpp' baseName: IntegerSet.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/IntegerSet.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/IntegerSet.hpp' baseName: Image.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Image.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Image.hpp' baseName: Export.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Export.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Export.hpp' baseName: Exception.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Exception.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Exception.hpp' baseName: Environment.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Environment.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Environment.hpp' baseName: DateTime.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/DateTime.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/DateTime.hpp' baseName: Container.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Container.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Container.hpp' baseName: ClickwrapPrompter.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/ClickwrapPrompter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/ClickwrapPrompter.hpp' baseName: CharIndexedVector.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/CharIndexedVector.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/CharIndexedVector.hpp' baseName: COMInitializer.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/COMInitializer.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/COMInitializer.hpp' baseName: BinaryData.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/BinaryData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/BinaryData.hpp' baseName: Base64.hpp dirName: pwiz/utility/misc 'pwiz/utility/misc/Base64.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/misc/Base64.hpp' baseName: XMLWriter.hpp dirName: pwiz/utility/minimxml 'pwiz/utility/minimxml/XMLWriter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/minimxml/XMLWriter.hpp' baseName: SAXParser.hpp dirName: pwiz/utility/minimxml 'pwiz/utility/minimxml/SAXParser.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/minimxml/SAXParser.hpp' baseName: round.hpp dirName: pwiz/utility/math 'pwiz/utility/math/round.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/round.hpp' baseName: qr.hpp dirName: pwiz/utility/math 'pwiz/utility/math/qr.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/qr.hpp' baseName: erf.hpp dirName: pwiz/utility/math 'pwiz/utility/math/erf.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/erf.hpp' baseName: Types.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Types.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Types.hpp' baseName: Stats.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Stats.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Stats.hpp' baseName: Parabola.hpp dirName: pwiz/utility/math 'pwiz/utility/math/Parabola.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/Parabola.hpp' baseName: OrderedPair.hpp dirName: pwiz/utility/math 'pwiz/utility/math/OrderedPair.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/OrderedPair.hpp' baseName: MatrixInverse.hpp dirName: pwiz/utility/math 'pwiz/utility/math/MatrixInverse.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/MatrixInverse.hpp' baseName: MatchedFilter.hpp dirName: pwiz/utility/math 'pwiz/utility/math/MatchedFilter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/MatchedFilter.hpp' baseName: LinearSolver.hpp dirName: pwiz/utility/math 'pwiz/utility/math/LinearSolver.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/LinearSolver.hpp' baseName: LinearLeastSquares.hpp dirName: pwiz/utility/math 'pwiz/utility/math/LinearLeastSquares.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/LinearLeastSquares.hpp' baseName: HouseholderQR.hpp dirName: pwiz/utility/math 'pwiz/utility/math/HouseholderQR.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/math/HouseholderQR.hpp' baseName: determinebinwidth.hpp dirName: pwiz/utility/findmf/base/resample/utilities 'pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp' baseName: masscomparefunctors.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/masscomparefunctors.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/masscomparefunctors.hpp' baseName: determinebinwidth.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/determinebinwidth.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/determinebinwidth.hpp' baseName: breakspec.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/breakspec.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/breakspec.hpp' baseName: bin1d.hpp dirName: pwiz/utility/findmf/base/resample 'pwiz/utility/findmf/base/resample/bin1d.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/resample/bin1d.hpp' baseName: preparedata.hpp dirName: pwiz/utility/findmf/base/filter/utilities 'pwiz/utility/findmf/base/filter/utilities/preparedata.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/utilities/preparedata.hpp' baseName: gauss.hpp dirName: pwiz/utility/findmf/base/filter/utilities 'pwiz/utility/findmf/base/filter/utilities/gauss.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/utilities/gauss.hpp' baseName: gaussfilter.hpp dirName: pwiz/utility/findmf/base/filter 'pwiz/utility/findmf/base/filter/gaussfilter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/gaussfilter.hpp' baseName: filter.hpp dirName: pwiz/utility/findmf/base/filter 'pwiz/utility/findmf/base/filter/filter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/filter/filter.hpp' baseName: interpolation.hpp dirName: pwiz/utility/findmf/base/base/utilities 'pwiz/utility/findmf/base/base/utilities/interpolation.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/utilities/interpolation.hpp' baseName: base.hpp dirName: pwiz/utility/findmf/base/base/utilities 'pwiz/utility/findmf/base/base/utilities/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/utilities/base.hpp' baseName: scale.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/scale.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/scale.hpp' baseName: interpolate.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/interpolate.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/interpolate.hpp' baseName: diff.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/diff.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/diff.hpp' baseName: copyif.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/copyif.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/copyif.hpp' baseName: constants.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/constants.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/constants.hpp' baseName: base.hpp dirName: pwiz/utility/findmf/base/base 'pwiz/utility/findmf/base/base/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/findmf/base/base/base.hpp' baseName: MzMobilityWindow.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/MzMobilityWindow.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/MzMobilityWindow.hpp' baseName: MZTolerance.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/MZTolerance.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/MZTolerance.hpp' baseName: IsotopeTable.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeTable.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeTable.hpp' baseName: IsotopeEnvelopeEstimator.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp' baseName: IsotopeCalculator.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/IsotopeCalculator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/IsotopeCalculator.hpp' baseName: Ion.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/Ion.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/Ion.hpp' baseName: ChemistryData.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/ChemistryData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/ChemistryData.hpp' baseName: Chemistry.hpp dirName: pwiz/utility/chemistry 'pwiz/utility/chemistry/Chemistry.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/utility/chemistry/Chemistry.hpp' baseName: Connection_mzMLb.hpp dirName: pwiz/data/msdata/mzmlb 'pwiz/data/msdata/mzmlb/Connection_mzMLb.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/mzmlb/Connection_mzMLb.hpp' baseName: examples.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/examples.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/examples.hpp' baseName: Version.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Version.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Version.hpp' baseName: TextWriter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/TextWriter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/TextWriter.hpp' baseName: SpectrumWorkerThreads.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumWorkerThreads.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumWorkerThreads.hpp' baseName: SpectrumList_mzXML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mzXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mzXML.hpp' baseName: SpectrumList_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mzML.hpp' baseName: SpectrumList_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_mz5.hpp' baseName: SpectrumList_MSn.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_MSn.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_MSn.hpp' baseName: SpectrumList_MGF.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_MGF.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_MGF.hpp' baseName: SpectrumList_BTDX.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumList_BTDX.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumList_BTDX.hpp' baseName: SpectrumListWrapper.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListWrapper.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListWrapper.hpp' baseName: SpectrumListCache.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListCache.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListCache.hpp' baseName: SpectrumListBase.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumListBase.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumListBase.hpp' baseName: SpectrumIterator.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumIterator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumIterator.hpp' baseName: SpectrumInfo.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SpectrumInfo.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SpectrumInfo.hpp' baseName: Serializer_mzXML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mzXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mzXML.hpp' baseName: Serializer_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mzML.hpp' baseName: Serializer_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_mz5.hpp' baseName: Serializer_MSn.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_MSn.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_MSn.hpp' baseName: Serializer_MGF.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Serializer_MGF.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Serializer_MGF.hpp' baseName: SHA1OutputObserver.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/SHA1OutputObserver.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/SHA1OutputObserver.hpp' baseName: References.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/References.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/References.hpp' baseName: Reader.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Reader.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Reader.hpp' baseName: RAMPAdapter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/RAMPAdapter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/RAMPAdapter.hpp' baseName: MemoryMRUCache.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MemoryMRUCache.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MemoryMRUCache.hpp' baseName: MSNumpress.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSNumpress.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSNumpress.hpp' baseName: MSDataMerger.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSDataMerger.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSDataMerger.hpp' baseName: MSDataFile.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSDataFile.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSDataFile.hpp' baseName: MSData.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/MSData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/MSData.hpp' baseName: LegacyAdapter.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/LegacyAdapter.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/LegacyAdapter.hpp' baseName: Index_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Index_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Index_mzML.hpp' baseName: IO.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/IO.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/IO.hpp' baseName: Diff.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/Diff.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/Diff.hpp' baseName: DefaultReaderList.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/DefaultReaderList.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/DefaultReaderList.hpp' baseName: ChromatogramList_mzML.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramList_mzML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramList_mzML.hpp' baseName: ChromatogramList_mz5.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramList_mz5.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramList_mz5.hpp' baseName: ChromatogramListBase.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/ChromatogramListBase.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/ChromatogramListBase.hpp' baseName: BinaryDataEncoder.hpp dirName: pwiz/data/msdata 'pwiz/data/msdata/BinaryDataEncoder.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/msdata/BinaryDataEncoder.hpp' baseName: SampleDatum.hpp dirName: pwiz/data/misc 'pwiz/data/misc/SampleDatum.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/SampleDatum.hpp' baseName: PeakData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/PeakData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/PeakData.hpp' baseName: MinimumPepXML.hpp dirName: pwiz/data/misc 'pwiz/data/misc/MinimumPepXML.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/MinimumPepXML.hpp' baseName: FrequencyDataTestData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/FrequencyDataTestData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/FrequencyDataTestData.hpp' baseName: FrequencyData.hpp dirName: pwiz/data/misc 'pwiz/data/misc/FrequencyData.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/FrequencyData.hpp' baseName: CalibrationParameters.hpp dirName: pwiz/data/misc 'pwiz/data/misc/CalibrationParameters.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/misc/CalibrationParameters.hpp' baseName: obo.hpp dirName: pwiz/data/common 'pwiz/data/common/obo.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/obo.hpp' baseName: diff_std.hpp dirName: pwiz/data/common 'pwiz/data/common/diff_std.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/diff_std.hpp' baseName: cv.hpp dirName: pwiz/data/common 'pwiz/data/common/cv.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/cv.hpp' baseName: Unimod.hpp dirName: pwiz/data/common 'pwiz/data/common/Unimod.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/Unimod.hpp' baseName: ParamTypes.hpp dirName: pwiz/data/common 'pwiz/data/common/ParamTypes.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/ParamTypes.hpp' baseName: MemoryIndex.hpp dirName: pwiz/data/common 'pwiz/data/common/MemoryIndex.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/MemoryIndex.hpp' baseName: Index.hpp dirName: pwiz/data/common 'pwiz/data/common/Index.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/Index.hpp' baseName: CVTranslator.hpp dirName: pwiz/data/common 'pwiz/data/common/CVTranslator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/CVTranslator.hpp' baseName: BinaryIndexStream.hpp dirName: pwiz/data/common 'pwiz/data/common/BinaryIndexStream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/data/common/BinaryIndexStream.hpp' baseName: SpectrumList_Demux.hpp dirName: pwiz/analysis/spectrum_processing 'pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp' baseName: DemuxDataProcessingStrings.hpp dirName: pwiz/analysis/demux 'pwiz/analysis/demux/DemuxDataProcessingStrings.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/analysis/demux/DemuxDataProcessingStrings.hpp' baseName: Version.hpp dirName: pwiz 'pwiz/Version.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/pwiz/Version.hpp' baseName: thread_specific_singleton.hpp dirName: boost/utility 'boost/utility/thread_specific_singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/thread_specific_singleton.hpp' baseName: singleton.hpp dirName: boost/utility 'boost/utility/singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/singleton.hpp' baseName: mutexed_singleton.hpp dirName: boost/utility 'boost/utility/mutexed_singleton.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/mutexed_singleton.hpp' baseName: singleton_manager.hpp dirName: boost/utility/detail 'boost/utility/detail/singleton_manager.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/singleton_manager.hpp' baseName: restricted.hpp dirName: boost/utility/detail 'boost/utility/detail/restricted.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/restricted.hpp' baseName: member_dereference.hpp dirName: boost/utility/detail 'boost/utility/detail/member_dereference.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/utility/detail/member_dereference.hpp' baseName: windows.hpp dirName: boost/nowide 'boost/nowide/windows.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/windows.hpp' baseName: system.hpp dirName: boost/nowide 'boost/nowide/system.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/system.hpp' baseName: stackstring.hpp dirName: boost/nowide 'boost/nowide/stackstring.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/stackstring.hpp' baseName: iostream.hpp dirName: boost/nowide 'boost/nowide/iostream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/iostream.hpp' baseName: fstream.hpp dirName: boost/nowide 'boost/nowide/fstream.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/fstream.hpp' baseName: filebuf.hpp dirName: boost/nowide 'boost/nowide/filebuf.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/filebuf.hpp' baseName: cstdlib.hpp dirName: boost/nowide 'boost/nowide/cstdlib.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cstdlib.hpp' baseName: cstdio.hpp dirName: boost/nowide 'boost/nowide/cstdio.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cstdio.hpp' baseName: convert.hpp dirName: boost/nowide 'boost/nowide/convert.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/convert.hpp' baseName: config.hpp dirName: boost/nowide 'boost/nowide/config.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/config.hpp' baseName: cenv.hpp dirName: boost/nowide 'boost/nowide/cenv.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/cenv.hpp' baseName: args.hpp dirName: boost/nowide 'boost/nowide/args.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/nowide/args.hpp' baseName: base64.hpp dirName: boost/iostreams/filter 'boost/iostreams/filter/base64.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/iostreams/filter/base64.hpp' baseName: arbitrary_positional_facade.hpp dirName: boost/iostreams 'boost/iostreams/arbitrary_positional_facade.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/iostreams/arbitrary_positional_facade.hpp' baseName: foreach_field.hpp dirName: boost 'boost/foreach_field.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/foreach_field.hpp' baseName: macros.hpp dirName: boost/enum 'boost/enum/macros.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/macros.hpp' baseName: iterator.hpp dirName: boost/enum 'boost/enum/iterator.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/iterator.hpp' baseName: bitfield.hpp dirName: boost/enum 'boost/enum/bitfield.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/bitfield.hpp' baseName: base.hpp dirName: boost/enum 'boost/enum/base.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum/base.hpp' baseName: enum.hpp dirName: boost 'boost/enum.hpp' -> '/build/reproducible-path/libpwizlite-3.0.10/debian/includes/pwizlite/boost/enum.hpp' make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10' dh_auto_build -O--build-system=cmake cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libpwizlite-3.0.10 -B/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu --check-build-system 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'/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [ 1%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS 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-I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK 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-DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp [ 13%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp [ 15%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 114 | } else if (init == mask) { | ~~~~~^~~~~~~ In file included from /usr/include/c++/15/ostream:42, from /usr/include/c++/15/iostream:43, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:27: In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here 346 | long long extrapol; | ^~~~~~~~ In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ [ 16%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const std::string&, const std::string&, std::string&, std::string&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:40:33: warning: unused parameter 'config' [-Wunused-parameter] 40 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const boost::logic::tribool&, const boost::logic::tribool&, boost::logic::tribool&, boost::logic::tribool&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const std::string&, const std::string&, std::string&, std::string&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:40:33: warning: unused parameter 'config' [-Wunused-parameter] 40 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(const boost::logic::tribool&, const boost::logic::tribool&, boost::logic::tribool&, boost::logic::tribool&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:27380: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl: In function 'const pwiz::cv::CVTermInfo& pwiz::cv::cvTermInfo(const char*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl:103:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 103 | for (int o=0;o::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here 346 | long long extrapol; | ^~~~~~~~ In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: /usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] 212 | { return _M_insert(__n); } | ~~~~~~~~~^~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ [ 27%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 28%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 30%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 31%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] 121 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] 162 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] 356 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ | ^ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] 131 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] 215 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] 243 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] 286 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] 306 | virtual Status endElement(const std::string& name, stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] 704 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] 705 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] 713 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] 739 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] 757 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] 781 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] 782 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] 799 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] 800 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 32%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 33%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] 121 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] 162 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] 356 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 35%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp [ 36%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:133:57: warning: unused parameter 'head' [-Wunused-parameter] 133 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:136:52: warning: unused parameter 'config' [-Wunused-parameter] 136 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzXML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:201:69: warning: unused parameter 'filename' [-Wunused-parameter] 201 | PWIZ_API_DECL std::string Reader_mzXML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzXML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:216:58: warning: unused parameter 'head' [-Wunused-parameter] 216 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:219:53: warning: unused parameter 'config' [-Wunused-parameter] 219 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MGF::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:267:86: warning: unused parameter 'head' [-Wunused-parameter] 267 | PWIZ_API_DECL std::string Reader_MGF::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:273:51: warning: unused parameter 'head' [-Wunused-parameter] 273 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:276:51: warning: unused parameter 'config' [-Wunused-parameter] 276 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:296:51: warning: unused parameter 'config' [-Wunused-parameter] 296 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MSn::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:307:86: warning: unused parameter 'head' [-Wunused-parameter] 307 | PWIZ_API_DECL std::string Reader_MSn::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:317:51: warning: unused parameter 'head' [-Wunused-parameter] 317 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:320:51: warning: unused parameter 'config' [-Wunused-parameter] 320 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:353:51: warning: unused parameter 'config' [-Wunused-parameter] 353 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_BTDX::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:364:63: warning: unused parameter 'filename' [-Wunused-parameter] 364 | PWIZ_API_DECL std::string Reader_BTDX::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:380:52: warning: unused parameter 'head' [-Wunused-parameter] 380 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:383:52: warning: unused parameter 'config' [-Wunused-parameter] 383 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:410:52: warning: unused parameter 'config' [-Wunused-parameter] 410 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mz5::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:429:62: warning: unused parameter 'filename' [-Wunused-parameter] 429 | PWIZ_API_DECL std::string Reader_mz5::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:462:51: warning: unused parameter 'filename' [-Wunused-parameter] 462 | PWIZ_API_DECL void Reader_mz5::read(const string& filename, | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:463:51: warning: unused parameter 'head' [-Wunused-parameter] 463 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:464:45: warning: unused parameter 'result' [-Wunused-parameter] 464 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:465:41: warning: unused parameter 'runIndex' [-Wunused-parameter] 465 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:466:51: warning: unused parameter 'config' [-Wunused-parameter] 466 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:488:51: warning: unused parameter 'config' [-Wunused-parameter] 488 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzMLb::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:507:64: warning: unused parameter 'filename' [-Wunused-parameter] 507 | PWIZ_API_DECL std::string Reader_mzMLb::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzMLb::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:532:58: warning: unused parameter 'filename' [-Wunused-parameter] 532 | PWIZ_API_DECL void Reader_mzMLb::read(const std::string& filename, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:533:24: warning: unused parameter 'head' [-Wunused-parameter] 533 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:534:13: warning: unused parameter 'result' [-Wunused-parameter] 534 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:535:9: warning: unused parameter 'runIndex' [-Wunused-parameter] 535 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Exception.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:28: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 37%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 38%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] 86 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] 87 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] 95 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] 120 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] 165 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] 136 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] 195 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] 267 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] 504 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] 505 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] 697 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] 698 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] 970 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] 1083 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] 1359 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] 1360 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] 3087 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] 3335 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here 2132 | readMzMLbBinaryDataArray(this->integerDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ | ^ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] 131 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] 215 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] 243 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] 286 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] 306 | virtual Status endElement(const std::string& name, stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] 704 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] 705 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] 713 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] 739 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] 757 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] 781 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] 782 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] 799 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] 800 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:133:57: warning: unused parameter 'head' [-Wunused-parameter] 133 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:136:52: warning: unused parameter 'config' [-Wunused-parameter] 136 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzXML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:201:69: warning: unused parameter 'filename' [-Wunused-parameter] 201 | PWIZ_API_DECL std::string Reader_mzXML::identify(const std::string& filename, const std::string& head) const | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzXML::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:216:58: warning: unused parameter 'head' [-Wunused-parameter] 216 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:219:53: warning: unused parameter 'config' [-Wunused-parameter] 219 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MGF::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:267:86: warning: unused parameter 'head' [-Wunused-parameter] 267 | PWIZ_API_DECL std::string Reader_MGF::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:273:51: warning: unused parameter 'head' [-Wunused-parameter] 273 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:276:51: warning: unused parameter 'config' [-Wunused-parameter] 276 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MGF::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:296:51: warning: unused parameter 'config' [-Wunused-parameter] 296 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_MSn::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:307:86: warning: unused parameter 'head' [-Wunused-parameter] 307 | PWIZ_API_DECL std::string Reader_MSn::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:317:51: warning: unused parameter 'head' [-Wunused-parameter] 317 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:320:51: warning: unused parameter 'config' [-Wunused-parameter] 320 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_MSn::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:353:51: warning: unused parameter 'config' [-Wunused-parameter] 353 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_BTDX::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:364:63: warning: unused parameter 'filename' [-Wunused-parameter] 364 | PWIZ_API_DECL std::string Reader_BTDX::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:380:52: warning: unused parameter 'head' [-Wunused-parameter] 380 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:383:52: warning: unused parameter 'config' [-Wunused-parameter] 383 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_BTDX::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:410:52: warning: unused parameter 'config' [-Wunused-parameter] 410 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mz5::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:429:62: warning: unused parameter 'filename' [-Wunused-parameter] 429 | PWIZ_API_DECL std::string Reader_mz5::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:462:51: warning: unused parameter 'filename' [-Wunused-parameter] 462 | PWIZ_API_DECL void Reader_mz5::read(const string& filename, | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:463:51: warning: unused parameter 'head' [-Wunused-parameter] 463 | const string& head, | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:464:45: warning: unused parameter 'result' [-Wunused-parameter] 464 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:465:41: warning: unused parameter 'runIndex' [-Wunused-parameter] 465 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:466:51: warning: unused parameter 'config' [-Wunused-parameter] 466 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mz5::read(const std::string&, const std::string&, std::vector >&, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:488:51: warning: unused parameter 'config' [-Wunused-parameter] 488 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzMLb::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:507:64: warning: unused parameter 'filename' [-Wunused-parameter] 507 | PWIZ_API_DECL std::string Reader_mzMLb::identify(const string& filename, const string& head) const | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual void pwiz::msdata::Reader_mzMLb::read(const std::string&, const std::string&, pwiz::msdata::MSData&, int, const pwiz::msdata::Reader::Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:532:58: warning: unused parameter 'filename' [-Wunused-parameter] 532 | PWIZ_API_DECL void Reader_mzMLb::read(const std::string& filename, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:533:24: warning: unused parameter 'head' [-Wunused-parameter] 533 | const std::string& head, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:534:13: warning: unused parameter 'result' [-Wunused-parameter] 534 | MSData& result, | ~~~~~~~~^~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:535:9: warning: unused parameter 'runIndex' [-Wunused-parameter] 535 | int runIndex, | ~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Exception.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:28: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 41%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here 131 | size_t byteCount; | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here 132 | const void* byteBuffer; | ^~~~~~~~~~ [ 42%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 43%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 45%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp [ 46%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 47%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] 136 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] 195 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] 267 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] 504 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] 505 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] 697 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] 698 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] 970 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] 1083 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] 1359 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] 1360 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] 3087 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] 3335 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here 2132 | readMzMLbBinaryDataArray(this->integerDataArray); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) | ~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 48%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here 131 | size_t byteCount; | ^~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] 305 | filterArray(byteBuffer, byteCount,compressed); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here 132 | const void* byteBuffer; | ^~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] 86 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] 87 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] 95 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] 120 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] 165 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) | ~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 50%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 51%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, from /usr/include/c++/15/memory:68, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 52%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 53%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 55%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, from /usr/include/c++/15/memory:68, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, from /usr/include/boost/shared_ptr.hpp:17, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: /usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 56%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] 552 | bool useWorkerThreads, bool continueOnError) const | ~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] 278 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 57%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp [ 58%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] 278 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 60%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 61%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] 1037 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] 1166 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] 1247 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] 1295 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ [ 62%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp [ 63%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 65%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 66%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 67%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] 1037 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] 1166 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] 1247 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] 1295 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ [ 68%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp [ 70%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 71%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp [ 73%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] 586 | const std::string& data, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] 587 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] 589 | virtual Status startElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] 590 | const Attributes& attributes, | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] 591 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] 593 | virtual Status endElement(const std::string& name, | ~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] 594 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] 596 | virtual Status characters(const SAXParser::saxstring& text, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ [ 75%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] 337 | mru_list taskMRU_; | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] 334 | bool continueOnError_; | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] 337 | mru_list taskMRU_; | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] 334 | bool continueOnError_; | ^~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 76%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp [ 77%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp [ 78%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp [ 80%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 81%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp [ 82%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp [ 83%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp [ 85%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 86%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp [ 87%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp [ 88%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp [ 90%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 91%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp [ 92%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ [ 93%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here 498 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here 499 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 268 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] 275 | if (index < 0 || index >= size()) | ~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 58 | Impl(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] 72 | Impl& operator=(void* cliNumericArray) | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here 500 | PWIZ_API_DECL template class BinaryData; | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 313 | begin_ = iterator(binaryData, true); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] 314 | end_ = iterator(binaryData, false); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 315 | cbegin_ = const_iterator(binaryData, true); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] 316 | cend_ = const_iterator(binaryData, false); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ [ 95%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp [ 96%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] 549 | if (inCDATA) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here 501 | bool inCDATA; | ^~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ [ 97%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] 549 | if (inCDATA) | ^~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here 501 | bool inCDATA; | ^~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] 303 | force_close_handles_to_filepath(const std::string &filepath, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] 304 | bool closeMemoryMappedSections) noexcept(true) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] 303 | force_close_handles_to_filepath(const std::string &filepath, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] 304 | bool closeMemoryMappedSections) noexcept(true) | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ [ 98%] Linking CXX static library libpwizlite.a cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/pwizlite-static.dir/cmake_clean_target.cmake cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-static.dir/link.txt --verbose=1 [100%] Linking CXX shared library libpwizlite.so cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-shared.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libz.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/ar qc libpwizlite.a "CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o" /usr/bin/ranlib libpwizlite.a make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [100%] Built target pwizlite-static /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/pwizlite-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libpwizlite.so.3 -o libpwizlite.so.3.0.10 "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o" /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0 /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0 cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libpwizlite.so.3.0.10 libpwizlite.so.3 libpwizlite.so make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' [100%] Built target pwizlite-shared make[2]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' dh_auto_test -O--build-system=cmake create-stamp debian/debhelper-build-stamp dh_testroot -O--build-system=cmake dh_prep -O--build-system=cmake dh_auto_install -O--build-system=cmake cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libpwizlite-3.0.10/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libpwizlite-3.0.10 -B/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "release" -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/pwizlite/FindPwizLite.cmake -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/pwizlite/PwizLiteConfig.cmake -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/libpwizlite.pc -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.so.3.0.10 -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.so.3 -- Installing: /build/reproducible-path/libpwizlite-3.0.10/debian/tmp/usr/lib/aarch64-linux-gnu/libpwizlite.a make[1]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' dh_install -O--build-system=cmake dh_installdocs -O--build-system=cmake dh_installchangelogs -O--build-system=cmake dh_installman -O--build-system=cmake dh_installsystemduser -O--build-system=cmake dh_lintian -O--build-system=cmake dh_perl -O--build-system=cmake dh_link -O--build-system=cmake dh_strip_nondeterminism -O--build-system=cmake dh_compress -O--build-system=cmake dh_fixperms -O--build-system=cmake dh_missing -O--build-system=cmake dh_dwz -a -O--build-system=cmake dh_strip -a -O--build-system=cmake dh_makeshlibs -a -O--build-system=cmake dh_shlibdeps -a -O--build-system=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -O--build-system=cmake dh_gencontrol -O--build-system=cmake dh_md5sums -O--build-system=cmake dh_builddeb -O--build-system=cmake dpkg-deb: building package 'libpwizlite3t64-dbgsym' in '../libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite-dev' in '../libpwizlite-dev_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64' in '../libpwizlite3t64_3.0.10-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libpwizlite_3.0.10-1_arm64.buildinfo dpkg-genchanges --build=binary -O../libpwizlite_3.0.10-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3594514 and its subdirectories I: Current time: Fri Sep 19 05:41:19 +14 2025 I: pbuilder-time-stamp: 1758210079 + false + set +x Thu Sep 18 15:41:19 UTC 2025 I: Signing ./b2/libpwizlite_3.0.10-1_arm64.buildinfo as libpwizlite_3.0.10-1_arm64.buildinfo.asc Thu Sep 18 15:41:19 UTC 2025 I: Signed ./b2/libpwizlite_3.0.10-1_arm64.buildinfo as ./b2/libpwizlite_3.0.10-1_arm64.buildinfo.asc Thu Sep 18 15:41:19 UTC 2025 - build #2 for libpwizlite/forky/arm64 on codethink04-arm64 done. Starting cleanup. All cleanup done. Thu Sep 18 15:41:19 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-T9l1VsW1, removing. /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI: total 596 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 15:39 b1 drwxrwxr-x 2 jenkins jenkins 4096 Sep 18 15:41 b2 -rw-rw-r-- 1 jenkins jenkins 2257 Sep 8 11:01 libpwizlite_3.0.10-1.dsc -rw------- 1 jenkins jenkins 590120 Sep 18 15:39 rbuildlog.BIEayob /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1: total 15644 -rw-r--r-- 1 jenkins jenkins 586422 Sep 18 15:38 build.log -rw-r--r-- 1 jenkins jenkins 1193108 Sep 18 15:38 libpwizlite-dev_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 12517276 Sep 18 15:38 libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 807176 Sep 18 15:38 libpwizlite3t64_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 8912 Sep 18 15:38 libpwizlite_3.0.10-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2257 Sep 18 15:38 libpwizlite_3.0.10-1.dsc -rw-r--r-- 1 jenkins jenkins 7797 Sep 18 15:38 libpwizlite_3.0.10-1_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 8679 Sep 18 15:38 libpwizlite_3.0.10-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2296 Sep 18 15:38 libpwizlite_3.0.10-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 2000 Sep 18 15:38 libpwizlite_3.0.10-1_source.changes -rw-r--r-- 1 jenkins jenkins 824516 Sep 18 15:39 libpwizlite_3.0.10.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2: total 15640 -rw-rw-r-- 1 jenkins jenkins 588359 Sep 18 15:41 build.log -rw-r--r-- 1 jenkins jenkins 1193108 Sep 18 15:41 libpwizlite-dev_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 12517276 Sep 18 15:41 libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 807176 Sep 18 15:41 libpwizlite3t64_3.0.10-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 8912 Sep 18 15:41 libpwizlite_3.0.10-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2257 Sep 18 15:41 libpwizlite_3.0.10-1.dsc -rw-rw-r-- 1 jenkins jenkins 7797 Sep 18 15:41 libpwizlite_3.0.10-1_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 8679 Sep 18 15:41 libpwizlite_3.0.10-1_arm64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 2296 Sep 18 15:41 libpwizlite_3.0.10-1_arm64.changes -rw-rw-r-- 1 jenkins jenkins 2000 Sep 18 15:41 libpwizlite_3.0.10-1_source.changes -rw-r--r-- 1 jenkins jenkins 824516 Sep 18 15:41 libpwizlite_3.0.10.orig.tar.gz Thu Sep 18 15:41:45 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Thu Sep 18 15:41:46 UTC 2025 I: libpwizlite_3.0.10-1_arm64.changes: Format: 1.8 Date: Sun, 07 Sep 2025 15:57:48 +0200 Source: libpwizlite Binary: libpwizlite-dev libpwizlite3t64 libpwizlite3t64-dbgsym Architecture: arm64 Version: 3.0.10-1 Distribution: unstable Urgency: low Maintainer: The Debichem Group Changed-By: Filippo Rusconi Description: libpwizlite-dev - Library to load mzML/mzXML files (dev files) libpwizlite3t64 - Library to load mzML/mzXML files (runtime files) Changes: libpwizlite (3.0.10-1) unstable; urgency=low . * New updated source tree using the github git repos (git clone of master today, commit 15279682f644e55e27333dead7929c8533854916), then used the maintainer-scripts/extract-files-from-proteowizard-source-tree.sh. * This new version that fixes the build with boost1.88. * Took advantage to remove support for MZMLb, which is not needed # pwiz/data/msdata/mzmlb/Connection_mzMLb.cpp in src/CMakeLists.txt and adding flag with add_definitions(-DWITHOUT_MZ5 -DWITHOUT_MZMLB) * Standards-Version: 4.7.2 (no specific modifs performed). Checksums-Sha1: 9761b500d520ce18f788e1ac027c817636f04ee5 1193108 libpwizlite-dev_3.0.10-1_arm64.deb 25088f6160c4ab62617eae3f17457e0c773f8a5b 12517276 libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb 875873196e48fa482a3e33fc30bbabb33ac5e430 807176 libpwizlite3t64_3.0.10-1_arm64.deb 643591391f14aaac7795509502a63f9635c0ab96 7797 libpwizlite_3.0.10-1_arm64.buildinfo Checksums-Sha256: 842e59fe89109ad86e80b32463837459a7503a12234ee899dde49db451c8069e 1193108 libpwizlite-dev_3.0.10-1_arm64.deb 0551a9b7e3100391ad1d9a9c2882bdd2d062e158ea33d7eb0ef422940ebe0910 12517276 libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb d7e2e6a1d44cec0bced9191dc5a6572d9f40ff84a1fa05128ffc88f2c2848860 807176 libpwizlite3t64_3.0.10-1_arm64.deb e502c61bc1ebc7651a268307d69cd103d20079589732589eee1e128ed08fdcae 7797 libpwizlite_3.0.10-1_arm64.buildinfo Files: bc2da512468be74a26e6fedb39997837 1193108 libdevel optional libpwizlite-dev_3.0.10-1_arm64.deb 0be00ce12f09ae0e281eb5215e88fc28 12517276 debug optional libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb 0ec973b08f23c387453146b3a2c840b8 807176 libs optional libpwizlite3t64_3.0.10-1_arm64.deb 31a38e968aaea5fbd461f98c21f20566 7797 libs optional libpwizlite_3.0.10-1_arm64.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/arm64/libpwizlite_3.0.8-1_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/libpwizlite_3.0.8-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-09-18 15:38:45.807917766 +0000 +++ b2/build.log 2025-09-18 15:41:20.796121790 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Oct 21 09:58:02 -12 2026 -I: pbuilder-time-stamp: 1792619882 +I: Current time: Fri Sep 19 05:39:04 +14 2025 +I: pbuilder-time-stamp: 1758209944 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration @@ -22,53 +22,85 @@ dpkg-source: info: unpacking libpwizlite_3.0.10-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3561100/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 18 15:39 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='5e180ef467394b67ab8b6031bba6baa1' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3561100' - PS1='# ' - PS2='> ' + INVOCATION_ID=1125a8d40b58404aa2d673c925416856 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3594514 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_QxHw --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1 --logfile b1/build.log libpwizlite_3.0.10-1.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/pbuilderrc_09n8 --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2 --logfile b2/build.log libpwizlite_3.0.10-1.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3561100/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -229,7 +261,7 @@ Get: 103 http://deb.debian.org/debian forky/main arm64 python3-roman all 5.1-1 [11.0 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 105 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] -Fetched 78.4 MB in 4s (19.5 MB/s) +Fetched 78.4 MB in 0s (168 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) @@ -586,8 +618,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Oct 21 21:58:44 UTC 2026. -Universal Time is now: Wed Oct 21 21:58:44 UTC 2026. +Local time is now: Thu Sep 18 15:39:31 UTC 2025. +Universal Time is now: Thu Sep 18 15:39:31 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -683,7 +715,11 @@ fakeroot is already the newest version (1.37.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/libpwizlite-3.0.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libpwizlite_3.0.10-1_source.changes +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libpwizlite-3.0.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libpwizlite_3.0.10-1_source.changes dpkg-buildpackage: info: source package libpwizlite dpkg-buildpackage: info: source version 3.0.10-1 dpkg-buildpackage: info: source distribution unstable @@ -767,7 +803,7 @@ STATUS: Now managing the CPack process Including file : /build/reproducible-path/libpwizlite-3.0.10/CMakeStuff/targz-source-package-creation.cmake After file inclusion CPACK_SOURCE_IGNORE_FILES: \\.cache/;.*\\.tar\\.gz;moc_.*cxx;\\.#.*;.*\\.aux;.*\\.bbl;.*\\.blg;.*\\.log;.*\\.out;.*\\.toc;/devel_archives/;/doc\\/html/;/doc\\/latex/;Makefile;install_manifest.txt;CMakeCache.txt;CPackConfig.cmake;CPackSourceConfig.cmake;/CMakeFiles/;/_CPack_Packages/;/Debug/;/Release/;/tests/;/\\.externalToolBuilders/;/\\.git/;/\\.kdev4/;development.kdev4;/\\.settings/;Makefile;\\.cdtbuild;\\.cdtproject;\\.project;\\.cproject;/win32/;/win64/;/build/;/buildwin64/;/cbuild/;/wbuild/;/bin/;/buildmingw/;test\\.ods;buildwin32.cmd;libpwizlite.so;OpenDocument-v1.0-os.pdf;debian/;compile_commands.json --- Configuring done (1.7s) +-- Configuring done (0.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -1263,41 +1299,41 @@ make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/depend -make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/depend make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' +make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/depend cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libpwizlite-3.0.10 /build/reproducible-path/libpwizlite-3.0.10/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src/CMakeFiles/pwizlite-static.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libpwizlite-3.0.10 /build/reproducible-path/libpwizlite-3.0.10/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src/CMakeFiles/pwizlite-shared.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' -make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/build +make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' -make -f src/CMakeFiles/pwizlite-shared.dir/build.make src/CMakeFiles/pwizlite-shared.dir/build +make -f src/CMakeFiles/pwizlite-static.dir/build.make src/CMakeFiles/pwizlite-static.dir/build make[3]: Entering directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' -[ 1%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp -[ 2%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o +[ 1%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp +[ 2%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o +[ 3%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp -[ 3%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o -[ 6%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o -[ 5%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -[ 7%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection 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/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp +[ 13%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp +[ 15%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 114 | } else if (init == mask) { @@ -1323,6 +1359,8 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here 347 | long long y; | ^ +[ 16%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] @@ -1340,14 +1378,8 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -1357,11 +1389,31 @@ 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] + 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) + | ~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] + 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) + | ~~~~~^~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] + 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) + | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: @@ -1369,7 +1421,36 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -[ 16%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] + 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) + | ~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] + 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) + | ~~~~~^~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] + 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) + | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] @@ -1383,17 +1464,25 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:88:33: warning: unused parameter 'config' [-Wunused-parameter] 88 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp: In function 'void pwiz::data::diff_impl::diff(pwiz::cv::CVID, pwiz::cv::CVID, pwiz::cv::CVID&, pwiz::cv::CVID&, const pwiz::data::BaseDiffConfig&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/diff_std.cpp:124:33: warning: unused parameter 'config' [-Wunused-parameter] 124 | const BaseDiffConfig& config) | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -1402,14 +1491,49 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] + 585 | virtual Status processingInstruction(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] + 586 | const std::string& data, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] + 587 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] + 589 | virtual Status startElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 590 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] + 591 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] + 593 | virtual Status endElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] + 594 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] + 596 | virtual Status characters(const SAXParser::saxstring& text, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] + 597 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); @@ -1456,59 +1580,19 @@ 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:29: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] - 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) - | ~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] - 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) - | ~~~~~^~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] - 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) - | ~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldIgnore(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:145:53: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 145 | return (key=="unit_" && value==MS_unit_OBSOLETE && cvid==UO_unit || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:147:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 147 | key=="pi_" && value==MS_PI && cvid==MS_pI || // MS_pI==isoelectric point - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:148:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 148 | key=="de_" && value==MS_DE && cvid==1001274 || // conflict between 1000246 and 1001274 - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp: In function 'bool pwiz::data::shouldReplace(const std::string&, pwiz::cv::CVID, pwiz::cv::CVID)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:34: warning: unused parameter 'key' [-Wunused-parameter] - 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) - | ~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:44: warning: unused parameter 'value' [-Wunused-parameter] - 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) - | ~~~~~^~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/CVTranslator.cpp:153:56: warning: unused parameter 'cvid' [-Wunused-parameter] - 153 | bool shouldReplace(const string& key, CVID value, CVID cvid) - | ~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:34: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); @@ -1519,6 +1603,16 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: @@ -1530,6 +1624,82 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl:103:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 103 | for (int o=0;o::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', + inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: +/usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] + 212 | { return _M_insert(__n); } + | ~~~~~~~~~^~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here + 346 | long long extrapol; + | ^~~~~~~~ +In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', + inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: +/usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] + 212 | { return _M_insert(__n); } + | ~~~~~~~~~^~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here + 347 | long long y; + | ^ +[ 27%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +[ 28%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': @@ -1540,40 +1710,25 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.cpp:27380: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl: In function 'const pwiz::cv::CVTermInfo& pwiz::cv::cvTermInfo(const char*)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/cv.inl:103:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] - 103 | for (int o=0;o(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 17%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 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-I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp -[ 22%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp -[ 25%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB 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src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp -[ 27%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp -[ 28%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:26: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -1593,12 +1748,20 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -[ 30%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'void pwiz::msdata::MSNumpress::encodeInt(int, unsigned char*, size_t*)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:114:21: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] - 114 | } else if (init == mask) { - | ~~~~~^~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 30%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -1634,13 +1797,7 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:27: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:29: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -1675,9 +1832,29 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 31%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -1686,13 +1863,24 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, + from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, + from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, + from /usr/include/boost/shared_ptr.hpp:17, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: +/usr/include/boost/bind.hpp: At global scope: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -1727,52 +1915,9 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.hpp:30, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:27: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /usr/include/c++/15/ostream:42, - from /usr/include/c++/15/iostream:43, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:27: -In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', - inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:403:33: -/usr/include/c++/15/bits/ostream.h:212:25: warning: 'extrapol' may be used uninitialized [-Wmaybe-uninitialized] - 212 | { return _M_insert(__n); } - | ~~~~~~~~~^~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:346:15: note: 'extrapol' was declared here - 346 | long long extrapol; - | ^~~~~~~~ -In member function 'std::basic_ostream<_CharT, _Traits>::__ostream_type& std::basic_ostream<_CharT, _Traits>::operator<<(long long int) [with _CharT = char; _Traits = std::char_traits]', - inlined from 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)' at /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:404:26: -/usr/include/c++/15/bits/ostream.h:212:25: warning: 'y' may be used uninitialized [-Wmaybe-uninitialized] - 212 | { return _M_insert(__n); } - | ~~~~~~~~~^~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp: In function 'size_t pwiz::msdata::MSNumpress::decodeLinear(const unsigned char*, size_t, double*)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSNumpress.cpp:347:15: note: 'y' was declared here - 347 | long long y; - | ^ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/ChromatogramList_mzML.cpp:31: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -1781,38 +1926,7 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 31%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/References.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, - from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, - from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, - from /usr/include/boost/shared_ptr.hpp:17, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: -/usr/include/boost/bind.hpp: At global scope: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -1848,11 +1962,122 @@ 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/LegacyAdapter.cpp:31: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] + 121 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] + 162 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] + 356 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] + 84 | } catch (index_not_found e){ + | ^ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] + 131 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] + 215 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] + 243 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] + 286 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] + 306 | virtual Status endElement(const std::string& name, stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 704 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] + 705 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] + 713 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] + 739 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] + 757 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 781 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] + 782 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] + 799 | virtual Status characters(const SAXParser::saxstring& text, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] + 800 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] + 896 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +[ 32%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 33%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] + 121 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] + 162 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] + 356 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +[ 35%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp +[ 36%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -1900,18 +2125,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] - 121 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] - 162 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] - 356 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] @@ -1921,18 +2134,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } @@ -1940,10 +2141,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const @@ -2055,11 +2252,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:536:19: warning: unused parameter 'config' [-Wunused-parameter] 536 | const Config& config) const | ~~~~~~~~~~~~~~^~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/string:53, from /usr/include/c++/15/stdexcept:41, @@ -2072,43 +2264,9 @@ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] - 585 | virtual Status processingInstruction(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] - 586 | const std::string& data, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] - 587 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] - 589 | virtual Status startElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 590 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] - 591 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] - 593 | virtual Status endElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] - 594 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] - 596 | virtual Status characters(const SAXParser::saxstring& text, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] - 597 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -2117,88 +2275,15 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] - 84 | } catch (index_not_found e){ - | ^ -[ 32%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:131:47: warning: unused parameter 'position' [-Wunused-parameter] - 131 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPrecursor::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:215:45: warning: unused parameter 'position' [-Wunused-parameter] - 215 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:243:47: warning: unused parameter 'position' [-Wunused-parameter] - 243 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:286:45: warning: unused parameter 'position' [-Wunused-parameter] - 286 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:306:70: warning: unused parameter 'position' [-Wunused-parameter] - 306 | virtual Status endElement(const std::string& name, stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:704:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 704 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:705:47: warning: unused parameter 'position' [-Wunused-parameter] - 705 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:713:45: warning: unused parameter 'position' [-Wunused-parameter] - 713 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:739:47: warning: unused parameter 'position' [-Wunused-parameter] - 739 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:757:45: warning: unused parameter 'position' [-Wunused-parameter] - 757 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:781:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 781 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:782:47: warning: unused parameter 'position' [-Wunused-parameter] - 782 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndex::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:799:59: warning: unused parameter 'text' [-Wunused-parameter] - 799 | virtual Status characters(const SAXParser::saxstring& text, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:800:45: warning: unused parameter 'position' [-Wunused-parameter] - 800 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] - 896 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: +[ 37%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -2233,134 +2318,8 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] - 85 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] - 136 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] - 195 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] - 267 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 504 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] - 505 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 697 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] - 698 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] - 970 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 86 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] - 87 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] - 95 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] - 120 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] - 165 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] - 201 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] - 1083 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 1359 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] - 1360 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] - 2957 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] - 3087 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || - | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] - 3335 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here - 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] - 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here - 2132 | readMzMLbBinaryDataArray(this->integerDataArray); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] - 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/References.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 33%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumInfo.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp -[ 35%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -2369,30 +2328,9 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 36%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] - 1134 | if ((result >= 0 && result < size()) || s == 0) - | ~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] - 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const - | ~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] - 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const - | ~~~~~^~~~~~~~~~~~~ -[ 37%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:27: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -2401,15 +2339,8 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumInfo.cpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.hpp:30, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:26: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -2418,7 +2349,12 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:28: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -2453,49 +2389,19 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] - 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) - | ^~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here - 587 | case MS_Bruker_Agilent_YEP_nativeID_format: - | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:29: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:121:47: warning: unused parameter 'position' [-Wunused-parameter] - 121 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerPeaks::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:162:45: warning: unused parameter 'position' [-Wunused-parameter] - 162 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexCreator::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_BTDX.cpp:356:45: warning: unused parameter 'position' [-Wunused-parameter] - 356 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:27: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:29: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -2530,41 +2436,34 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] - 305 | filterArray(byteBuffer, byteCount,compressed); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here - 131 | size_t byteCount; - | ^~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] - 305 | filterArray(byteBuffer, byteCount,compressed); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here - 132 | const void* byteBuffer; - | ^~~~~~~~~~ -[ 38%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp -[ 40%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:28: +[ 38%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, + from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, + from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, + from /usr/include/boost/shared_ptr.hpp:17, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: +/usr/include/boost/bind.hpp: At global scope: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +[ 40%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] 585 | virtual Status processingInstruction(const std::string& name, @@ -2599,33 +2498,119 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzML.cpp:30: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /usr/include/boost/smart_ptr/detail/deprecated_macros.hpp:8, - from /usr/include/boost/smart_ptr/detail/sp_counted_base.hpp:22, - from /usr/include/boost/smart_ptr/detail/shared_count.hpp:22, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, - from /usr/include/boost/shared_ptr.hpp:17, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/common/ParamTypes.hpp:33, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:30: -/usr/include/boost/bind.hpp: At global scope: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -[ 41%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp -[ 42%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Version.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Version.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:86:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 86 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:87:47: warning: unused parameter 'position' [-Wunused-parameter] + 87 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexListOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:95:45: warning: unused parameter 'position' [-Wunused-parameter] + 95 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:120:47: warning: unused parameter 'position' [-Wunused-parameter] + 120 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerOffset::characters(const pwiz::minimxml::SAXParser::saxstring&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:165:45: warning: unused parameter 'position' [-Wunused-parameter] + 165 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerIndexList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] + 201 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] + 85 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerUserParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:136:47: warning: unused parameter 'position' [-Wunused-parameter] + 136 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCVParam::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:195:47: warning: unused parameter 'position' [-Wunused-parameter] + 195 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerParamContainer::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:267:47: warning: unused parameter 'position' [-Wunused-parameter] + 267 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerFileDescription::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:504:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 504 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:505:47: warning: unused parameter 'position' [-Wunused-parameter] + 505 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerComponentList::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:697:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 697 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:698:47: warning: unused parameter 'position' [-Wunused-parameter] + 698 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerDataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:970:47: warning: unused parameter 'position' [-Wunused-parameter] + 970 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerScanSettings::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1083:47: warning: unused parameter 'position' [-Wunused-parameter] + 1083 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerProduct::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1359:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 1359 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:1360:47: warning: unused parameter 'position' [-Wunused-parameter] + 1360 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrum::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] + 2957 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerChromatogramListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3087:47: warning: unused parameter 'position' [-Wunused-parameter] + 3087 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerMSData::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3417:31: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 3417 | else if (version == 1 && name == "acquisitionSettings" /* mzML 1.0 */ || + | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:3335:47: warning: unused parameter 'position' [-Wunused-parameter] + 3335 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::BinaryDataArray]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2106:49: required from here + 2106 | readMzMLbBinaryDataArray(this->binaryDataArray); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] + 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In instantiation of 'void pwiz::msdata::IO::HandlerBinaryDataArray::readMzMLbBinaryDataArray(BinaryDataArrayType*) [with BinaryDataArrayType = pwiz::msdata::IntegerDataArray]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2132:49: required from here + 2132 | readMzMLbBinaryDataArray(this->integerDataArray); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] + 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp: In constructor 'pwiz::msdata::{anonymous}::SpectrumList_mzXMLImpl::SpectrumList_mzXMLImpl(boost::shared_ptr >, const pwiz::msdata::MSData&, bool)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:84:30: warning: catching polymorphic type 'struct pwiz::msdata::SpectrumList_mzXML::index_not_found' by value [-Wcatch-value=] 84 | } catch (index_not_found e){ @@ -2687,338 +2672,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_mzXML.cpp:896:45: warning: unused parameter 'position' [-Wunused-parameter] 896 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ -[ 43%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/BinaryDataEncoder.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] - 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] - 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } - | ~~~~~~~~~~~~~~~~~~~^~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] - 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const - | ~~~~~~~~~~~~~~^~~~~~ -[ 46%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp -In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, - from /usr/include/c++/15/memory:68, - from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, - from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, - from /usr/include/boost/shared_ptr.hpp:17, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: -/usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here - 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 1164 | make_pair(_T1&& __x, _T2&& __y) - | ^~~~~~~~~ -In file included from /usr/include/c++/15/bits/stl_algobase.h:64, - from /usr/include/c++/15/algorithm:62, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: -/usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here - 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 1164 | make_pair(_T1&& __x, _T2&& __y) - | ^~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] - 552 | bool useWorkerThreads, bool continueOnError) const - | ~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] - 552 | bool useWorkerThreads, bool continueOnError) const - | ~~~~~^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] - 585 | virtual Status processingInstruction(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] - 586 | const std::string& data, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] - 587 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] - 589 | virtual Status startElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 590 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] - 591 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] - 593 | virtual Status endElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] - 594 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] - 596 | virtual Status characters(const SAXParser::saxstring& text, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] - 597 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -[ 47%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 278 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] - 279 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -[ 48%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] - 585 | virtual Status processingInstruction(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] - 586 | const std::string& data, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] - 587 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] - 589 | virtual Status startElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 590 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] - 591 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] - 593 | virtual Status endElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] - 594 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] - 596 | virtual Status characters(const SAXParser::saxstring& text, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] - 597 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 50%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] - 456 | const SpectrumListPtr spectrumListPtr, - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] - 1037 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] - 1166 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] - 1247 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] - 1295 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] - 1363 | stream_offset position) - | ~~~~~~~~~~~~~~^~~~~~~~ -[ 51%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/DefaultReaderList.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp -[ 52%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -[ 53%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: @@ -3026,76 +2679,11 @@ 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:38: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] - 305 | filterArray(byteBuffer, byteCount,compressed); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here - 131 | size_t byteCount; - | ^~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] - 305 | filterArray(byteBuffer, byteCount,compressed); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here - 132 | const void* byteBuffer; - | ^~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -[ 55%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] - 585 | virtual Status processingInstruction(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] - 586 | const std::string& data, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] - 587 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] - 589 | virtual Status startElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 590 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] - 591 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] - 593 | virtual Status endElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] - 594 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] - 596 | virtual Status characters(const SAXParser::saxstring& text, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] - 597 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -3143,12 +2731,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] @@ -3165,8 +2747,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ -[ 56%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp: In member function 'virtual std::string pwiz::msdata::Reader_mzML::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.cpp:126:68: warning: unused parameter 'filename' [-Wunused-parameter] 126 | PWIZ_API_DECL std::string Reader_mzML::identify(const std::string& filename, const std::string& head) const @@ -3290,6 +2870,87 @@ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ +[ 41%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/IO.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] + 305 | filterArray(byteBuffer, byteCount,compressed); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here + 131 | size_t byteCount; + | ^~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] + 305 | filterArray(byteBuffer, byteCount,compressed); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here + 132 | const void* byteBuffer; + | ^~~~~~~~~~ +[ 42%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +[ 43%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.hpp:32: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] + 585 | virtual Status processingInstruction(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] + 586 | const std::string& data, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] + 587 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] + 589 | virtual Status startElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 590 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] + 591 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] + 593 | virtual Status endElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] + 594 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] + 596 | virtual Status characters(const SAXParser::saxstring& text, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] + 597 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +[ 45%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp +[ 46%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 47%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerCV::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:85:47: warning: unused parameter 'position' [-Wunused-parameter] 85 | stream_offset position) @@ -3339,10 +3000,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2641:35: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 2641 | else if (version == 1 && name == "acquisitionList" /* mzML 1.0 */ || name == "scanList") | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] - 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) - | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::IO::HandlerSpectrumListSimple::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2957:47: warning: unused parameter 'position' [-Wunused-parameter] 2957 | stream_offset position) @@ -3372,11 +3029,7 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/IO.cpp:2409:56: warning: unused parameter 'binaryDataArray' [-Wunused-parameter] 2409 | void readMzMLbBinaryDataArray(BinaryDataArrayType* binaryDataArray) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ -[ 57%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Index_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -3386,64 +3039,13 @@ 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 58%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] - 585 | virtual Status processingInstruction(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] - 586 | const std::string& data, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] - 587 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] - 589 | virtual Status startElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] - 590 | const Attributes& attributes, - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] - 591 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] - 593 | virtual Status endElement(const std::string& name, - | ~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] - 594 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] - 596 | virtual Status characters(const SAXParser::saxstring& text, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] - 597 | stream_offset position) {return Status::Ok;} - | ~~~~~~~~~~~~~~^~~~~~~~ -[ 60%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -3452,8 +3054,40 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:24: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] + 1134 | if ((result >= 0 && result < size()) || s == 0) + | ~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::SpectrumPtr pwiz::msdata::SpectrumListSimple::spectrum(size_t, bool) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1245:75: warning: unused parameter 'getBinaryData' [-Wunused-parameter] + 1245 | PWIZ_API_DECL SpectrumPtr SpectrumListSimple::spectrum(size_t index, bool getBinaryData) const + | ~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual pwiz::msdata::ChromatogramPtr pwiz::msdata::ChromatogramListSimple::chromatogram(size_t, bool) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] + 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const + | ~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -3462,12 +3096,68 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +[ 48%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] + 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] + 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } + | ~~~~~~~~~~~~~~~~~~~^~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp: In member function 'void pwiz::msdata::BinaryDataEncoder::Impl::encode(const double*, size_t, std::string&, size_t*)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteCount' may be used uninitialized [-Wmaybe-uninitialized] + 305 | filterArray(byteBuffer, byteCount,compressed); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:131:12: note: 'byteCount' was declared here + 131 | size_t byteCount; + | ^~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:305:37: warning: 'byteBuffer' may be used uninitialized [-Wmaybe-uninitialized] + 305 | filterArray(byteBuffer, byteCount,compressed); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/BinaryDataEncoder.cpp:132:17: note: 'byteBuffer' was declared here + 132 | const void* byteBuffer; + | ^~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -3532,33 +3222,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Index_mzML.cpp:201:47: warning: unused parameter 'position' [-Wunused-parameter] 201 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] - 337 | mru_list taskMRU_; - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] - 334 | bool continueOnError_; - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] - 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) - | ^~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:25: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -[ 61%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In member function 'virtual size_t pwiz::msdata::SpectrumList::findAbbreviated(const std::string&, char) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1134:21: warning: comparison of unsigned expression in '>= 0' is always true [-Wtype-limits] 1134 | if ((result >= 0 && result < size()) || s == 0) @@ -3571,12 +3234,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:1312:87: warning: unused parameter 'getBinaryData' [-Wunused-parameter] 1312 | PWIZ_API_DECL ChromatogramPtr ChromatogramListSimple::chromatogram(size_t index, bool getBinaryData) const | ~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) @@ -3584,39 +3241,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here 587 | case MS_Bruker_Agilent_YEP_nativeID_format: | ^~~~ -[ 62%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSDataFile.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 63%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp -[ 65%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.hpp:30: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:39: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp: In member function 'virtual std::string pwiz::msdata::Reader_MS2::identify(const std::string&, const std::string&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:53: warning: unused parameter 'filename' [-Wunused-parameter] @@ -3625,36 +3249,23 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/DefaultReaderList.hpp:98:82: warning: unused parameter 'head' [-Wunused-parameter] 98 | virtual std::string identify(const std::string& filename, const std::string& head) const { return ""; } | ~~~~~~~~~~~~~~~~~~~^~~~ +In file included from /usr/include/c++/15/bits/stl_algobase.h:64, + from /usr/include/c++/15/algorithm:62, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:29: +/usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here + 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 1164 | make_pair(_T1&& __x, _T2&& __y) + | ^~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSDataFile.cpp:40: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -[ 66%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] - 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/algorithm:62, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:29, @@ -3666,6 +3277,24 @@ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp: In function 'std::string pwiz::msdata::id::translateNativeIDToScanNumber(pwiz::cv::CVID, const std::string&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:582:13: warning: this statement may fall through [-Wimplicit-fallthrough=] + 582 | if (id.find("controllerType=0 controllerNumber=1") != 0) + | ^~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.cpp:587:9: note: here + 587 | case MS_Bruker_Agilent_YEP_nativeID_format: + | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] @@ -3675,16 +3304,16 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +[ 50%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 67%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp -[ 68%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp +[ 51%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const @@ -3703,16 +3332,49 @@ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ -[ 70%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp -[ 71%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: +[ 52%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Reader.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp: In member function 'bool pwiz::chemistry::MzMobilityWindow::mobilityValueInBounds(double) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:40:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 40 | mobilityBounds.get().first < mobilityValue && mobilityValue < mobilityBounds.get().second; + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.hpp:30: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': @@ -3723,234 +3385,54 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +[ 53%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here - 498 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] - 268 | if (index < 0 || index >= size()) - | ~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here - 498 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] - 275 | if (index < 0 || index >= size()) - | ~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here - 498 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] - 58 | Impl(void* cliNumericArray) - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here - 498 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] - 72 | Impl& operator=(void* cliNumericArray) - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here - 498 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] - 313 | begin_ = iterator(binaryData, true); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' - 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] - 314 | end_ = iterator(binaryData, false); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' - 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] - 315 | cbegin_ = const_iterator(binaryData, true); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' - 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] - 316 | cend_ = const_iterator(binaryData, false); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' - 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here - 499 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] - 268 | if (index < 0 || index >= size()) - | ~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here - 499 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] - 275 | if (index < 0 || index >= size()) - | ~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here - 499 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] - 58 | Impl(void* cliNumericArray) - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here - 499 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] - 72 | Impl& operator=(void* cliNumericArray) - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here - 499 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] - 313 | begin_ = iterator(binaryData, true); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' - 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] - 314 | end_ = iterator(binaryData, false); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' - 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] - 315 | cbegin_ = const_iterator(binaryData, true); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' - 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] - 316 | cend_ = const_iterator(binaryData, false); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' - 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here - 500 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] - 268 | if (index < 0 || index >= size()) - | ~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here - 500 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] - 275 | if (index < 0 || index >= size()) - | ~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here - 500 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] - 58 | Impl(void* cliNumericArray) - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here - 500 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] - 72 | Impl& operator=(void* cliNumericArray) - | ~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here - 500 | PWIZ_API_DECL template class BinaryData; - | ^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] - 313 | begin_ = iterator(binaryData, true); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' - 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] - 314 | end_ = iterator(binaryData, false); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' - 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] - 315 | cbegin_ = const_iterator(binaryData, true); - | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' - 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] - 316 | cend_ = const_iterator(binaryData, false); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' - 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} - | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 72%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp -[ 73%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp -[ 75%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp -[ 76%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: +[ 55%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] + 552 | bool useWorkerThreads, bool continueOnError) const + | ~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] + 552 | bool useWorkerThreads, bool continueOnError) const + | ~~~~~^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 77%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp: In member function 'virtual void pwiz::msdata::Reader::readIds(const std::string&, const std::string&, std::vector >&, const Config&) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Reader.cpp:87:119: warning: unused parameter 'config' [-Wunused-parameter] + 87 | PWIZ_API_DECL void Reader::readIds(const string& filename, const string& head, vector& results, const Config& config) const + | ~~~~~~~~~~~~~~^~~~~~ +In file included from /usr/include/c++/15/bits/stl_tempbuf.h:62, + from /usr/include/c++/15/memory:68, + from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, + from /usr/include/boost/smart_ptr/detail/shared_count.hpp:23, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:17, + from /usr/include/boost/shared_ptr.hpp:17, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:29: +/usr/include/c++/15/bits/stl_pair.h: In instantiation of 'constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/chemistry/MzMobilityWindow.hpp:34:98: required from here + 34 | MzMobilityWindow(double mobility, double mobilityTolerance) : MzMobilityWindow(std::make_pair(mobility - mobilityTolerance, mobility + mobilityTolerance)) {} + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 1164 | make_pair(_T1&& __x, _T2&& __y) + | ^~~~~~~~~ +[ 56%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined - 51 | #pragma GCC warning "WIN32 is NOT defined" - | ^~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] - 549 | if (inCDATA) - | ^~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here - 501 | bool inCDATA; - | ^~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] - 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] - 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.hpp:26, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': @@ -3966,6 +3448,12 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': @@ -3976,22 +3464,18 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:28: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] + 552 | bool useWorkerThreads, bool continueOnError) const + | ~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] + 552 | bool useWorkerThreads, bool continueOnError) const + | ~~~~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] - 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); - | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -4027,15 +3511,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp: In member function 'void pwiz::msdata::Serializer_MSn::write(std::ostream&, const pwiz::msdata::MSData&, const pwiz::util::IterationListenerRegistry*, bool, bool) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:10: warning: unused parameter 'useWorkerThreads' [-Wunused-parameter] - 552 | bool useWorkerThreads, bool continueOnError) const - | ~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MSn.cpp:552:33: warning: unused parameter 'continueOnError' [-Wunused-parameter] - 552 | bool useWorkerThreads, bool continueOnError) const - | ~~~~~^~~~~~~~~~~~~~~ -[ 78%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: @@ -4049,16 +3524,81 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] 279 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:27, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:25: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.hpp:29: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_MGF.cpp:27: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 80%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp -[ 81%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp +[ 57%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp +[ 58%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.hpp:31: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:32: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] + 585 | virtual Status processingInstruction(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] + 586 | const std::string& data, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] + 587 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] + 589 | virtual Status startElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 590 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] + 591 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] + 593 | virtual Status endElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] + 594 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] + 596 | virtual Status characters(const SAXParser::saxstring& text, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] + 597 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': @@ -4074,6 +3614,21 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:33: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::HandlerIndexedMZML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:278:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 278 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzML.cpp:279:47: warning: unused parameter 'position' [-Wunused-parameter] + 279 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +[ 60%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -4115,20 +3670,57 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] - 303 | force_close_handles_to_filepath(const std::string &filepath, - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] - 304 | bool closeMemoryMappedSections) noexcept(true) - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] - 859 | check_path_length(const string &path) - | ~~~~~~~~~~~~~~^~~~ +[ 61%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] + 456 | const SpectrumListPtr spectrumListPtr, + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::HandlerScanFileContent::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1037:47: warning: unused parameter 'position' [-Wunused-parameter] + 1037 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1166:47: warning: unused parameter 'position' [-Wunused-parameter] + 1166 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_msInstrument::endElement(const std::string&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1247:45: warning: unused parameter 'position' [-Wunused-parameter] + 1247 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_dataProcessing::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1295:47: warning: unused parameter 'position' [-Wunused-parameter] + 1295 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::msdata::{anonymous}::Handler_mzXML::startElement(const std::string&, const pwiz::minimxml::SAXParser::Handler::Attributes&, pwiz::minimxml::SAXParser::Handler::stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] + 1363 | stream_offset position) + | ~~~~~~~~~~~~~~^~~~~~~~ +[ 62%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumListBase.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp +[ 63%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +[ 65%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 66%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -4137,6 +3729,13 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.hpp:31: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +[ 67%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:25: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': @@ -4147,6 +3746,52 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:32: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] + 585 | virtual Status processingInstruction(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] + 586 | const std::string& data, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] + 587 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] + 589 | virtual Status startElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 590 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] + 591 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] + 593 | virtual Status endElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] + 594 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] + 596 | virtual Status characters(const SAXParser::saxstring& text, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] + 597 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:33: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp: In function 'std::vector pwiz::msdata::{anonymous}::getPrecursorInfo(const pwiz::msdata::Spectrum&, pwiz::msdata::SpectrumListPtr, pwiz::cv::CVID)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:456:62: warning: unused parameter 'spectrumListPtr' [-Wunused-parameter] 456 | const SpectrumListPtr spectrumListPtr, @@ -4171,7 +3816,62 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/Serializer_mzXML.cpp:1363:47: warning: unused parameter 'position' [-Wunused-parameter] 1363 | stream_offset position) | ~~~~~~~~~~~~~~^~~~~~~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.cpp:26: +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +[ 68%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp +[ 70%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.hpp:30, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); @@ -4182,25 +3882,40 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 82%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp -[ 83%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp -[ 85%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 71%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 86%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp -[ 87%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp -[ 88%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumListBase.hpp:28, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.hpp:29, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp: In static member function 'static size_t pwiz::msdata::{anonymous}::SpectrumList_MGFImpl::FindEndTag(const std::string&, size_t)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MGF.cpp:353:27: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] + 353 | for (int i = 0; i < sizeof(endTagsCCSInTitle) / sizeof(endTagsCCSInTitle[0]); i++) + | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 72%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp +[ 73%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] 769 | virtual void warn_once(const char* msg) const {} @@ -4209,8 +3924,6 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] 853 | virtual void warn_once(const char* msg) const {} | ~~~~~~~~~~~~^~~ -[ 90%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] @@ -4246,44 +3959,119 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] 597 | stream_offset position) {return Status::Ok;} | ~~~~~~~~~~~~~~^~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] + 769 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] + 853 | virtual void warn_once(const char* msg) const {} + | ~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumList_MSn.cpp:28: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:28: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::processingInstruction(const std::string&, const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:585:61: warning: unused parameter 'name' [-Wunused-parameter] + 585 | virtual Status processingInstruction(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:586:61: warning: unused parameter 'data' [-Wunused-parameter] + 586 | const std::string& data, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:587:56: warning: unused parameter 'position' [-Wunused-parameter] + 587 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::startElement(const std::string&, const Attributes&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:589:52: warning: unused parameter 'name' [-Wunused-parameter] + 589 | virtual Status startElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:590:51: warning: unused parameter 'attributes' [-Wunused-parameter] + 590 | const Attributes& attributes, + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:591:47: warning: unused parameter 'position' [-Wunused-parameter] + 591 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::endElement(const std::string&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:593:50: warning: unused parameter 'name' [-Wunused-parameter] + 593 | virtual Status endElement(const std::string& name, + | ~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:594:45: warning: unused parameter 'position' [-Wunused-parameter] + 594 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp: In member function 'virtual pwiz::minimxml::SAXParser::Handler::Status pwiz::minimxml::SAXParser::Handler::characters(const pwiz::minimxml::SAXParser::saxstring&, stream_offset)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:596:59: warning: unused parameter 'text' [-Wunused-parameter] + 596 | virtual Status characters(const SAXParser::saxstring& text, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.hpp:597:45: warning: unused parameter 'position' [-Wunused-parameter] + 597 | stream_offset position) {return Status::Ok;} + | ~~~~~~~~~~~~~~^~~~~~~~ +[ 75%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] + 337 | mru_list taskMRU_; + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] + 334 | bool continueOnError_; + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] + 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) + | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:24: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] + 337 | mru_list taskMRU_; + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] + 334 | bool continueOnError_; + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] + 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) + | ^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:29: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.hpp:26, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:26: -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::SpectrumListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:769:40: warning: unused parameter 'msg' [-Wunused-parameter] - 769 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp: In member function 'virtual void pwiz::msdata::ChromatogramListSimple::warn_once(const char*) const': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/MSData.hpp:853:40: warning: unused parameter 'msg' [-Wunused-parameter] - 853 | virtual void warn_once(const char* msg) const {} - | ~~~~~~~~~~~~^~~ -[ 91%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o +[ 76%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp +[ 77%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp +[ 78%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp +[ 80%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 81%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp -[ 92%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o +[ 82%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp +[ 83%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp +[ 85%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: @@ -4295,37 +4083,218 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp: In constructor 'pwiz::msdata::SpectrumWorkerThreads::Impl::Impl(const pwiz::msdata::SpectrumList&, bool, bool)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:337:22: warning: 'pwiz::msdata::SpectrumWorkerThreads::Impl::taskMRU_' will be initialized after [-Wreorder] - 337 | mru_list taskMRU_; - | ^~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:334:10: warning: 'bool pwiz::msdata::SpectrumWorkerThreads::Impl::continueOnError_' [-Wreorder] - 334 | bool continueOnError_; - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/data/msdata/SpectrumWorkerThreads.cpp:60:5: warning: when initialized here [-Wreorder] - 60 | Impl(const SpectrumList& sl, bool useWorkerThreads, bool continueOnError) - | ^~~~ -[ 93%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/XMLWriter.cpp:26: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Base64.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 95%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp -[ 96%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -[ 97%] Linking CXX static library libpwizlite.a -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/pwizlite-static.dir/cmake_clean_target.cmake -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-static.dir/link.txt --verbose=1 +[ 86%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp +[ 87%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp +[ 88%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp +[ 90%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.cpp:27: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp: In member function 'virtual pwiz::util::IterationListener::Status pwiz::util::IterationListener::update(const UpdateMessage&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IterationListener.hpp:60:48: warning: unused parameter 'updateMessage' [-Wunused-parameter] + 60 | virtual Status update(const UpdateMessage& updateMessage) {return Status_Ok;} + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 91%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp +[ 92%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here + 498 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] + 268 | if (index < 0 || index >= size()) + | ~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = double; reference = double&; size_type = long unsigned int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here + 498 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] + 275 | if (index < 0 || index >= size()) + | ~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = double]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here + 498 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] + 58 | Impl(void* cliNumericArray) + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = double]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here + 498 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] + 72 | Impl& operator=(void* cliNumericArray) + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = double]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here + 498 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] + 313 | begin_ = iterator(binaryData, true); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' + 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] + 314 | end_ = iterator(binaryData, false); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = double]' + 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] + 315 | cbegin_ = const_iterator(binaryData, true); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' + 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] + 316 | cend_ = const_iterator(binaryData, false); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = double]' + 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = float; const_reference = const float&; size_type = long unsigned int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here + 499 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] + 268 | if (index < 0 || index >= size()) + | ~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = float; reference = float&; size_type = long unsigned int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here + 499 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] + 275 | if (index < 0 || index >= size()) + | ~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = float]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here + 499 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] + 58 | Impl(void* cliNumericArray) + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = float]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here + 499 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] + 72 | Impl& operator=(void* cliNumericArray) + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = float]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:499:30: required from here + 499 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] + 313 | begin_ = iterator(binaryData, true); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' + 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] + 314 | end_ = iterator(binaryData, false); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = float]' + 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] + 315 | cbegin_ = const_iterator(binaryData, true); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' + 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] + 316 | cend_ = const_iterator(binaryData, false); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = float]' + 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = long int; const_reference = const long int&; size_type = long unsigned int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here + 500 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:268:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] + 268 | if (index < 0 || index >= size()) + | ~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'T& pwiz::util::BinaryData::at(size_type) [with T = long int; reference = long int&; size_type = long unsigned int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here + 500 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:275:19: warning: comparison of unsigned expression in '< 0' is always false [-Wtype-limits] + 275 | if (index < 0 || index >= size()) + | ~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl::Impl(void*) [with T = long int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here + 500 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:58:16: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] + 58 | Impl(void* cliNumericArray) + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'pwiz::util::BinaryData::Impl& pwiz::util::BinaryData::Impl::operator=(void*) [with T = long int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here + 500 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:72:27: warning: unused parameter 'cliNumericArray' [-Wunused-parameter] + 72 | Impl& operator=(void* cliNumericArray) + | ~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp: In instantiation of 'void pwiz::util::BinaryData::Impl::cacheIterators(pwiz::util::BinaryData&) [with T = long int]': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:500:30: required from here + 500 | PWIZ_API_DECL template class BinaryData; + | ^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:313:16: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] + 313 | begin_ = iterator(binaryData, true); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' + 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:314:14: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::iterator& pwiz::util::BinaryData::iterator::operator=(const pwiz::util::BinaryData::iterator&)' is deprecated [-Wdeprecated-copy] + 314 | end_ = iterator(binaryData, false); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:125:9: note: because 'pwiz::util::BinaryData::iterator' has user-provided 'pwiz::util::BinaryData::iterator::iterator(const pwiz::util::BinaryData::iterator&) [with T = long int]' + 125 | iterator(const iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:315:17: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] + 315 | cbegin_ = const_iterator(binaryData, true); + | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' + 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:316:15: warning: implicitly-declared 'constexpr pwiz::util::BinaryData::const_iterator& pwiz::util::BinaryData::const_iterator::operator=(const pwiz::util::BinaryData::const_iterator&)' is deprecated [-Wdeprecated-copy] + 316 | cend_ = const_iterator(binaryData, false); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' + 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} + | ^~~~~~~~~~~~~~ +[ 93%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:24: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp: In instantiation of 'const T& pwiz::util::BinaryData::at(size_type) const [with T = double; const_reference = const double&; size_type = long unsigned int]': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.cpp:498:30: required from here @@ -4495,18 +4464,16 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/BinaryData.hpp:85:9: note: because 'pwiz::util::BinaryData::const_iterator' has user-provided 'pwiz::util::BinaryData::const_iterator::const_iterator(const pwiz::util::BinaryData::const_iterator&) [with T = long int]' 85 | const_iterator(const const_iterator& rhs) : current_(rhs.current_) {} | ^~~~~~~~~~~~~~ +[ 95%] Building CXX object src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp +[ 96%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, - from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/SHA1Calculator.cpp:33: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ -/usr/bin/ar qc libpwizlite.a "CMakeFiles/pwizlite-static.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/MSNumpress.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/References.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumInfo.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_BTDX.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumList_mzXML.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/Version.cpp.o" 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"CMakeFiles/pwizlite-static.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-static.dir/pwiz/utility/misc/Filesystem.cpp.o" -/usr/bin/ranlib libpwizlite.a -make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' -[ 97%] Built target pwizlite-static -[ 98%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined 51 | #pragma GCC warning "WIN32 is NOT defined" | ^~~~~~~~~~~~~~~~~~~~~~ @@ -4519,11 +4486,40 @@ 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:76: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] + 549 | if (inCDATA) + | ^~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here + 501 | bool inCDATA; + | ^~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Std.hpp:31, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +[ 97%] Building CXX object src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_RANDOM_DYN_LINK -DBOOST_RANDOM_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DWITHOUT_MZ5 -DWITHOUT_MZMLB -Dpwizlite_shared_EXPORTS -I/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src -I/build/reproducible-path/libpwizlite-3.0.10/src -I/build/reproducible-path/libpwizlite-3.0.10/src/boost -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-unknown-pragmas -Wall -Wextra -fPIC -Wall -MD -MT src/CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -MF CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o.d -o CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o -c /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'bool pwiz::util::IntegerSet::Iterator::operator==(const pwiz::util::IntegerSet::Iterator&) const': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp: In member function 'void pwiz::util::IntegerSet::insert(Interval)': /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:138:79: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 138 | if (eraseBegin != intervals_.end() && eraseBegin->begin <= interval.begin && eraseBegin->end >= interval.end || @@ -4532,6 +4528,35 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/IntegerSet.cpp:325:63: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 325 | return (it_!=end_ && that.it_!=that.end_ && it_==that.it_ && value_==that.value_ || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] + 549 | if (inCDATA) + | ^~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here + 501 | bool inCDATA; + | ^~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::random_access_compressed_streambuf::my_seekg(std::streampos, std::ios_base::seekdir, std::ios_base::openmode)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:824:138: warning: unused parameter 'Mode' [-Wunused-parameter] + 824 | std::streampos random_access_compressed_streambuf::my_seekg(std::streampos offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp: In member function 'std::streampos pwiz::util::chunky_streambuf::my_seekg(boost::iostreams::stream_offset, std::ios_base::seekdir, std::ios_base::openmode)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/random_access_compressed_ifstream.cpp:1199:137: warning: unused parameter 'Mode' [-Wunused-parameter] + 1199 | std::streampos chunky_streambuf::my_seekg(boost::iostreams::stream_offset offset, std::ios_base::seekdir whence,std::ios_base::openmode Mode) { + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:51:21: warning: WIN32 is NOT defined + 51 | #pragma GCC warning "WIN32 is NOT defined" + | ^~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.hpp:34, + from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:26: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ +In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] + 87 | return std::find_if(str.begin(), str.end(), [](char ch) { return !isprint(static_cast(ch)) || static_cast(ch) < 0; }); + | ~~~~~~~~~~~~~~~~~~~~~^~~ In file included from /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.cpp:21: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp: In lambda function: /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/String.hpp:87:135: warning: comparison is always false due to limited range of data type [-Wtype-limits] @@ -4554,13 +4579,20 @@ /build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] 859 | check_path_length(const string &path) | ~~~~~~~~~~~~~~^~~~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp: In function 'void pwiz::minimxml::SAXParser::parse(std::istream&, Handler&)': -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:549:17: warning: 'inCDATA' may be used uninitialized [-Wmaybe-uninitialized] - 549 | if (inCDATA) - | ^~ -/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/minimxml/SAXParser.cpp:501:14: note: 'inCDATA' was declared here - 501 | bool inCDATA; - | ^~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::force_close_handles_to_filepath(const std::string&, bool)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:303:52: warning: unused parameter 'filepath' [-Wunused-parameter] + 303 | force_close_handles_to_filepath(const std::string &filepath, + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:304:38: warning: unused parameter 'closeMemoryMappedSections' [-Wunused-parameter] + 304 | bool closeMemoryMappedSections) noexcept(true) + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp: In function 'void pwiz::util::check_path_length(const std::string&)': +/build/reproducible-path/libpwizlite-3.0.10/src/pwiz/utility/misc/Filesystem.cpp:859:33: warning: unused parameter 'path' [-Wunused-parameter] + 859 | check_path_length(const string &path) + | ~~~~~~~~~~~~~~^~~~ +[ 98%] Linking CXX static library libpwizlite.a +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/pwizlite-static.dir/cmake_clean_target.cmake +cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-static.dir/link.txt --verbose=1 [100%] Linking CXX shared library libpwizlite.so cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/pwizlite-shared.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. @@ -4577,6 +4609,10 @@ /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. 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'/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' +[100%] Built target pwizlite-static /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/libpwizlite-3.0.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/pwizlite-shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libpwizlite.so.3 -o libpwizlite.so.3.0.10 "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/ParamTypes.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/CVTranslator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/cv.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/common/diff_std.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/ChromatogramList_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/LegacyAdapter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/MSNumpress.cpp.o" 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"CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/Serializer_mzXML.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumListBase.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MGF.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumList_MSn.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/data/msdata/SpectrumWorkerThreads.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/SAXParser.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/minimxml/XMLWriter.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Base64.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IterationListener.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/SHA1Calculator.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/random_access_compressed_ifstream.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/BinaryData.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/IntegerSet.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/String.cpp.o" "CMakeFiles/pwizlite-shared.dir/pwiz/utility/misc/Filesystem.cpp.o" /usr/lib/aarch64-linux-gnu/libboost_iostreams.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_filesystem.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_thread.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_chrono.so.1.88.0 /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libboost_random.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_regex.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_atomic.so.1.88.0 /usr/lib/aarch64-linux-gnu/libboost_system.so.1.88.0 cd /build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_symlink_library libpwizlite.so.3.0.10 libpwizlite.so.3 libpwizlite.so make[3]: Leaving directory '/build/reproducible-path/libpwizlite-3.0.10/obj-aarch64-linux-gnu' @@ -4630,8 +4666,8 @@ dh_gencontrol -O--build-system=cmake dh_md5sums -O--build-system=cmake dh_builddeb -O--build-system=cmake -dpkg-deb: building package 'libpwizlite-dev' in '../libpwizlite-dev_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64-dbgsym' in '../libpwizlite3t64-dbgsym_3.0.10-1_arm64.deb'. +dpkg-deb: building package 'libpwizlite-dev' in '../libpwizlite-dev_3.0.10-1_arm64.deb'. dpkg-deb: building package 'libpwizlite3t64' in '../libpwizlite3t64_3.0.10-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libpwizlite_3.0.10-1_arm64.buildinfo dpkg-genchanges --build=binary -O../libpwizlite_3.0.10-1_arm64.changes @@ -4640,12 +4676,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3594514/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3561100 and its subdirectories -I: Current time: Wed Oct 21 10:01:45 -12 2026 -I: pbuilder-time-stamp: 1792620105 +I: removing directory /srv/workspace/pbuilder/3594514 and its subdirectories +I: Current time: Fri Sep 19 05:41:19 +14 2025 +I: pbuilder-time-stamp: 1758210079 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/libpwizlite_3.0.10-1.diff: 94.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/libpwizlite_3.0.10-1.diff.gz b2/build.log: 93.8% -- replaced with stdout Compressing the 1st log... b1/build.log: 93.3% -- replaced with stdout Thu Sep 18 15:41:47 UTC 2025 I: diffoscope 306 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_libpwizlite_forky_arm64_1758210107 + touch /var/log/reproducible-builds/diffoscope_stamp_libpwizlite_forky_arm64_1758210107 + RESULT=0 + systemd-run '--description=diffoscope on libpwizlite/3.0.10-1 in forky/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_6-119099 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI --run-session -c jenkins-reproducible-forky-diffoscope-bb16ace6-e243-438f-9ac9-5d2307a36aef -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/dbd-tmp-OrtXBPW ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/libpwizlite_3.0.10-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/libpwizlite_3.0.10-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/libpwizlite_3.0.10-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1/libpwizlite_3.0.10-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2/libpwizlite_3.0.10-1_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_6-119099.service; invocation ID: e1d2bee1e5fa4057b845b82a22b0547a # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/libpwizlite_3.0.10-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/libpwizlite_3.0.10-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/libpwizlite_3.0.10-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b1/libpwizlite_3.0.10-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.9TrSIvnI/b2/libpwizlite_3.0.10-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 204ms CPU time consumed: 176ms Memory peak: 17.4M (swap: 0B) _ _ _ _ _ _ _ | (_) |__ _ ____ _(_)___| (_) |_ ___ | | | '_ \| '_ \ \ /\ / / |_ / | | __/ _ \ | | | |_) | |_) \ V V /| |/ /| | | || __/ |_|_|_.__/| .__/ \_/\_/ |_/___|_|_|\__\___| |_| Thu Sep 18 15:41:47 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Thu Sep 18 15:41:47 UTC 2025 I: libpwizlite from forky built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-09-18 15:41:47] INFO: Starting at 2025-09-18 15:41:47.917484 [2025-09-18 15:41:48] INFO: Generating the pages of 1 package(s) [2025-09-18 15:41:48] CRITICAL: buildinfo not detected at /var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/amd64/libpwizlite_3.0.10-1_amd64.buildinfo [2025-09-18 15:41:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/libpwizlite_3.0.10-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/libpwizlite_3.0.10-1.diff.gz is missing [2025-09-18 15:41:48] CRITICAL: https://tests.reproducible-builds.org/debian/forky/arm64/libpwizlite didn't produce a buildlog, even though it has been built. [2025-09-18 15:41:48] INFO: Finished at 2025-09-18 15:41:48.160459, took: 0:00:00.242978 Thu Sep 18 15:41:48 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/forky/arm64/libpwizlite.html Thu Sep 18 15:41:48 UTC 2025 I: Removing signed libpwizlite_3.0.10-1_arm64.buildinfo.asc files: removed './b1/libpwizlite_3.0.10-1_arm64.buildinfo.asc' removed './b2/libpwizlite_3.0.10-1_arm64.buildinfo.asc' 1758210108 arm64 forky libpwizlite Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/arm64/libpwizlite_3.0.10-1.rbuild.log: 92.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/arm64/libpwizlite_3.0.10-1.rbuild.log.gz [2025-09-18 15:41:48] INFO: Starting at 2025-09-18 15:41:48.509959 [2025-09-18 15:41:48] INFO: Generating the pages of 1 package(s) [2025-09-18 15:41:48] CRITICAL: buildinfo not detected at /var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/amd64/libpwizlite_3.0.10-1_amd64.buildinfo [2025-09-18 15:41:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/forky/amd64/libpwizlite_3.0.10-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/amd64/libpwizlite_3.0.10-1.diff.gz is missing [2025-09-18 15:41:48] INFO: Finished at 2025-09-18 15:41:48.755734, took: 0:00:00.245778 All cleanup done. Thu Sep 18 15:41:48 UTC 2025 - total duration: 0h 6m 55s. Thu Sep 18 15:41:48 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-PJHSVEzi, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 6min 56.750s CPU time consumed: 3.760s Memory peak: 70.4M (swap: 0B)