Running as unit: rb-build-arm64_6-124912.service; invocation ID: f4b77f4a8f51444ca6f311230231efe2 ==================================================================================== Thu Oct 30 20:40:36 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_6) on jenkins, called using "codethink03-arm64 codethink04-arm64" as arguments. Thu Oct 30 20:40:36 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-6orjAu3r" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Oct 30 20:40:36 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Thu Oct 30 20:40:36 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-Z8ea11' Thu Oct 30 20:40:36 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Thu Oct 30 20:40:36 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-khk4H9' ok, let's check if autodock-vina is building anywhere yet… ok, autodock-vina is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of autodock-vina in forky on arm64 on jenkins now. 1st build will be done on codethink03-arm64.debian.net. 2nd build will be done on codethink04-arm64.debian.net. ============================================================================= Thu Oct 30 20:40:48 UTC 2025 I: starting to build autodock-vina/forky/arm64 on jenkins on '2025-10-30 20:40' Thu Oct 30 20:40:48 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_6/124912/console.log 1761856848 arm64 forky autodock-vina Thu Oct 30 20:40:48 UTC 2025 I: Downloading source for forky/autodock-vina=1.2.7-1 --2025-10-30 20:40:48-- http://deb.debian.org/debian/pool/main/a/autodock-vina/autodock-vina_1.2.7-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2279 (2.2K) [text/prs.lines.tag] Saving to: ‘autodock-vina_1.2.7-1.dsc’ 0K .. 100% 250M=0s 2025-10-30 20:40:48 (250 MB/s) - ‘autodock-vina_1.2.7-1.dsc’ saved [2279/2279] --2025-10-30 20:40:48-- http://deb.debian.org/debian/pool/main/a/autodock-vina/autodock-vina_1.2.7-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2279 (2.2K) [text/prs.lines.tag] Saving to: ‘autodock-vina_1.2.7-1.dsc’ 0K .. 100% 250M=0s 2025-10-30 20:40:48 (250 MB/s) - ‘autodock-vina_1.2.7-1.dsc’ saved [2279/2279] Thu Oct 30 20:40:48 UTC 2025 I: autodock-vina_1.2.7-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: autodock-vina Binary: autodock-vina Architecture: any Version: 1.2.7-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Michael Banck , Andreas Tille , Étienne Mollier Homepage: https://vina.scripps.edu Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/autodock-vina Vcs-Git: https://salsa.debian.org/med-team/autodock-vina.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libboost-all-dev, debhelper Package-List: autodock-vina deb science optional arch=any Checksums-Sha1: ec0dc62045bc0ea9616f105f201c75d8fd81dd88 46488149 autodock-vina_1.2.7.orig.tar.gz 50eb89d66f6651d927eb40e02a373a838aaa3012 37512 autodock-vina_1.2.7-1.debian.tar.xz Checksums-Sha256: 038a2ade139eeb85b4bc7f5242fbc770f192427735e17bdc877b7420f39553d9 46488149 autodock-vina_1.2.7.orig.tar.gz f3bd6be9598f7726b7dbaff18c4d6193ef75ec0e36bd134d4862e01fbdf19552 37512 autodock-vina_1.2.7-1.debian.tar.xz Files: e33b90cf5095517666324f16d2abc338 46488149 autodock-vina_1.2.7.orig.tar.gz ccf824f883dd913f6db976d1859010e5 37512 autodock-vina_1.2.7-1.debian.tar.xz Dgit: ece6211959072a44a5c3ea8f83d9fb8fd548bcff debian archive/debian/1.2.7-1 https://git.dgit.debian.org/autodock-vina -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmfEQz4UHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdosDhAAsg4+/X9GiNyLTY6xi/Tj+xYiA7Ev +hBBatQaS/J3F75bJa5sZV5SH1N6YCHLWgB+GqKFJCSqVCxiEy3DIDFLODjYwcIZ vLYIiaBlfV83ltHlgW72JSM4nIhU/BQB2+1qyKUdNwD9pat6nZF2G3g+7PP0i5Mx bhREhTfS75Pw9651EEqCWHrEY/OUtH4Wlmtg0iDU21pnhMOsmT3mlQQk9jO1vy1v L/eXfyBbf7hV7dUFzrQ+ReyWaV5W1h1aLbicd5PixjNvVhmYmIhn6S8Fsgdl1ILE HFSVl7aFlghRuYTqiwNwLZTp7oH6z14Gxwkrxoz9PiAErbzoY+m/KhRXIqcJ2UwM EUtteFTFPtpWHf3bXyfMlnNvVgsHi/zlaXwc/hNaOupIT8luKCPDZaGhmbDLOwif FM5rFwWda0KT9j4xvQocO9hEMJ/KOgSJm7SklF1DyulxtLH2CQHjT+T2s8/XoU6L EOCxb6DX/rK2n9xxdw6QYe0hOZKloLTQmvpXLv0m/hkkqI0gAAqcDgTQ+nN8K9SQ OxXZloIDcTe2jCo+dVR3s2Ri22QMVhQot/pH/Gwz2GlqiTleGLzG+cDsKHxcpTLd fbb6gPzXN5yL1UxJXF9RDVPm7Vxb5q+YoHXRR+SqC3OymZbaAoydW1r8aBq9+NGu 4QuNf42nMmUmEbs= =XH35 -----END PGP SIGNATURE----- Thu Oct 30 20:40:48 UTC 2025 I: Checking whether the package is not for us Thu Oct 30 20:40:48 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Thu Oct 30 20:40:48 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Thu Oct 30 20:40:48 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Thu Oct 30 20:40:48 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-81O98s' ==================================================================================== Thu Oct 30 20:40:48 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "1 autodock-vina forky /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4 1.2.7-1" as arguments. Thu Oct 30 20:40:48 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-F8gGnrEy" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Oct 30 20:40:48 UTC 2025 I: Downloading source for forky/autodock-vina=1.2.7-1 Reading package lists... NOTICE: 'autodock-vina' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/autodock-vina.git Please use: git clone https://salsa.debian.org/med-team/autodock-vina.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.5 MB of source archives. Get:1 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (dsc) [2279 B] Get:2 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (tar) [46.5 MB] Get:3 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (diff) [37.5 kB] Fetched 46.5 MB in 2s (27.7 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'autodock-vina' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/autodock-vina.git Please use: git clone https://salsa.debian.org/med-team/autodock-vina.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.5 MB of source archives. Get:1 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (dsc) [2279 B] Get:2 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (tar) [46.5 MB] Get:3 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (diff) [37.5 kB] Fetched 46.5 MB in 2s (27.7 MB/s) Download complete and in download only mode ============================================================================= Building autodock-vina in forky on arm64 on codethink03-arm64 now. Date: Thu Oct 30 20:40:51 GMT 2025 Date UTC: Thu Oct 30 20:40:51 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 30 08:40:51 -12 2025 I: pbuilder-time-stamp: 1761856851 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] tar: ./build: time stamp 2026-11-30 05:47:35 is 34204002.86979051 s in the future tar: ./dev/null: time stamp 2026-11-30 05:47:21 is 34203988.86963215 s in the future tar: ./dev/zero: time stamp 2026-11-30 05:47:21 is 34203988.86959699 s in the future tar: ./dev/full: time stamp 2026-11-30 05:47:21 is 34203988.86956579 s in the future tar: ./dev/random: time stamp 2026-11-30 05:47:21 is 34203988.86954415 s in the future tar: ./dev/urandom: time stamp 2026-11-30 05:47:21 is 34203988.86953323 s in the future tar: ./dev/tty: time stamp 2026-11-30 05:47:21 is 34203988.86952487 s in the future tar: ./dev/console: time stamp 2026-11-30 05:47:21 is 34203988.86951611 s in the future tar: ./dev/pts: time stamp 2026-11-30 05:47:21 is 34203988.86950619 s in the future tar: ./dev/ptmx: time stamp 2026-11-30 05:47:21 is 34203988.86949839 s in the future tar: ./etc/ld.so.cache: time stamp 2026-12-01 22:29:40 is 34350527.86938711 s in the future tar: ./etc/default: time stamp 2026-11-30 05:47:39 is 34204006.86934471 s in the future tar: ./etc/dpkg/origins/default: time stamp 2026-11-30 05:47:21 is 34203988.86930695 s in the future tar: ./etc/dpkg/origins: time stamp 2026-11-30 05:47:25 is 34203992.86929955 s in the future tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time stamp 2026-11-30 05:48:05 is 34204032.86927491 s in the future tar: ./etc/dpkg/dpkg.cfg.d: time stamp 2026-11-30 05:48:05 is 34204032.86926871 s in the future tar: ./etc/dpkg: time stamp 2026-11-30 05:47:35 is 34204002.86924523 s in the future tar: ./etc/skel: time stamp 2026-11-30 05:47:25 is 34203992.86916459 s in the future tar: ./etc/update-motd.d: time stamp 2026-11-30 05:47:25 is 34203992.86914503 s in the future tar: ./etc/apt/sources.list: time stamp 2026-11-30 05:48:05 is 34204032.86911883 s in the future tar: ./etc/apt/apt.conf.d/80proxy: time stamp 2026-11-30 05:48:05 is 34204032.86909815 s in the future tar: ./etc/apt/apt.conf.d/15pbuilder: time stamp 2026-11-30 05:47:35 is 34204002.86906895 s in the future tar: ./etc/apt/apt.conf.d: time stamp 2026-11-30 05:48:05 is 34204032.86906275 s in the future tar: ./etc/apt/trusted.gpg.d: time stamp 2026-11-30 05:47:35 is 34204002.86852491 s in the future tar: ./etc/apt: time stamp 2026-11-30 05:48:05 is 34204032.86846319 s in the future tar: ./etc/cron.daily: time stamp 2026-11-30 05:47:40 is 34204007.86794583 s in the future tar: ./etc/logrotate.d: time stamp 2026-11-30 05:47:40 is 34204007.86784071 s in the future tar: ./etc/ld.so.conf.d: time stamp 2026-11-30 05:47:40 is 34204007.86760219 s in the future tar: ./etc/security/opasswd: time stamp 2026-11-30 05:47:26 is 34203993.86741431 s in the future tar: ./etc/security: time stamp 2026-11-30 05:47:26 is 34203993.86736499 s in the future tar: ./etc/pam.d/common-auth: time stamp 2026-11-30 05:47:26 is 34203993.86725283 s in the future tar: ./etc/pam.d/common-account: time stamp 2026-11-30 05:47:26 is 34203993.86720419 s in the future tar: ./etc/pam.d/common-password: time stamp 2026-11-30 05:47:26 is 34203993.86716071 s in the future tar: ./etc/pam.d/common-session: time stamp 2026-11-30 05:47:26 is 34203993.86711819 s in the future tar: ./etc/pam.d/common-session-noninteractive: time stamp 2026-11-30 05:47:26 is 34203993.86707631 s in the future tar: ./etc/pam.d: time stamp 2026-12-01 16:41:49 is 34329656.86698351 s in the future tar: ./etc/terminfo: time stamp 2026-11-30 05:47:25 is 34203992.86692755 s in the future tar: ./etc/fstab: time stamp 2026-11-30 05:47:21 is 34203988.86685327 s in the future tar: ./etc/subuid: time stamp 2026-11-30 05:47:21 is 34203988.86680635 s in the future tar: ./etc/subgid: time stamp 2026-11-30 05:47:21 is 34203988.86676563 s in the future tar: ./etc/opt: time stamp 2026-11-30 05:47:21 is 34203988.86669399 s in the future tar: ./etc/shells: time stamp 2026-11-30 05:47:25 is 34203992.86665111 s in the future tar: ./etc/environment: time stamp 2026-11-30 05:47:26 is 34203993.86658835 s in the future tar: ./etc/kernel: time stamp 2026-11-30 05:47:26 is 34203993.86654463 s in the future tar: ./etc/perl/Net: time stamp 2026-11-30 05:47:35 is 34204002.86648691 s in the future tar: ./etc/perl: time stamp 2026-11-30 05:47:34 is 34204001.86645555 s in the future tar: ./etc/selinux: time stamp 2026-11-30 05:47:38 is 34204005.86637227 s in the future tar: ./etc/.pwd.lock: time stamp 2026-11-30 05:47:39 is 34204006.86602663 s in the future tar: ./etc/shadow: time stamp 2026-11-30 05:47:39 is 34204006.86596579 s in the future tar: ./etc/passwd-: time stamp 2026-11-30 05:47:21 is 34203988.86594027 s in the future tar: ./etc/passwd: time stamp 2026-11-30 05:47:39 is 34204006.86592783 s in the future tar: ./etc/gshadow: time stamp 2026-11-30 05:47:39 is 34204006.86590803 s in the future tar: ./etc/group-: time stamp 2026-11-30 05:47:21 is 34203988.86588999 s in the future tar: ./etc/group: time stamp 2026-11-30 05:47:39 is 34204006.86587815 s in the future tar: ./media: time stamp 2026-11-30 05:47:21 is 34203988.86581287 s in the future tar: ./mnt: time stamp 2026-11-30 05:47:21 is 34203988.86580351 s in the future tar: ./opt: time stamp 2026-11-30 05:47:21 is 34203988.86579411 s in the future tar: ./root: time stamp 2026-11-30 05:47:21 is 34203988.86576179 s in the future tar: ./run/lock: time stamp 2026-11-30 05:47:21 is 34203988.86573751 s in the future tar: ./srv: time stamp 2026-11-30 05:47:21 is 34203988.86572035 s in the future tar: ./usr/include/aarch64-linux-gnu/bits/types: time stamp 2026-11-30 05:47:32 is 34203999.30814083 s in the future tar: ./usr/include/aarch64-linux-gnu/bits: time stamp 2026-11-30 05:47:32 is 34203999.30473699 s in the future tar: ./usr/include/aarch64-linux-gnu/gnu: time stamp 2026-11-30 05:47:32 is 34203999.30463539 s in the future tar: ./usr/include/aarch64-linux-gnu/sys: time stamp 2026-11-30 05:47:32 is 34203999.30294479 s in the future tar: ./usr/include/aarch64-linux-gnu/c++/15/bits: time stamp 2026-12-01 22:29:39 is 34350526.30202555 s in the future tar: ./usr/include/aarch64-linux-gnu/c++/15/ext: time stamp 2026-12-01 22:29:39 is 34350526.30191803 s in the future tar: ./usr/include/aarch64-linux-gnu/c++/15: time stamp 2026-11-30 05:47:34 is 34204001.30190831 s in the future tar: ./usr/include/aarch64-linux-gnu/c++: time stamp 2026-11-30 05:47:34 is 34204001.30190175 s in the future tar: ./usr/include/arpa: time stamp 2026-11-30 05:47:32 is 34203999.30155003 s in the future tar: ./usr/include/finclude/aarch64-linux-gnu: time stamp 2026-11-30 05:47:32 is 34203999.30151447 s in the future tar: ./usr/include/finclude: time stamp 2026-11-30 05:47:32 is 34203999.30150363 s in the future tar: ./usr/include/net: time stamp 2026-11-30 05:47:32 is 34203999.30135307 s in the future tar: ./usr/include/netash: time stamp 2026-11-30 05:47:32 is 34203999.30132471 s in the future tar: ./usr/include/netatalk: time stamp 2026-11-30 05:47:32 is 34203999.30130343 s in the future tar: ./usr/include/netax25: time stamp 2026-11-30 05:47:32 is 34203999.30128003 s in the future tar: ./usr/include/neteconet: time stamp 2026-11-30 05:47:32 is 34203999.30126159 s in the future tar: ./usr/include/netinet: time stamp 2026-11-30 05:47:32 is 34203999.30085607 s in the future tar: ./usr/include/netipx: time stamp 2026-11-30 05:47:32 is 34203999.30082795 s in the future tar: ./usr/include/netiucv: time stamp 2026-11-30 05:47:32 is 34203999.30075631 s in the future tar: ./usr/include/netpacket: time stamp 2026-11-30 05:47:32 is 34203999.30073435 s in the future tar: ./usr/include/netrom: time stamp 2026-11-30 05:47:32 is 34203999.30070123 s in the future tar: ./usr/include/netrose: time stamp 2026-11-30 05:47:32 is 34203999.30067435 s in the future tar: ./usr/include/nfs: time stamp 2026-11-30 05:47:32 is 34203999.30064807 s in the future tar: ./usr/include/protocols: time stamp 2026-11-30 05:47:32 is 34203999.30049479 s in the future tar: ./usr/include/rpc: time stamp 2026-11-30 05:47:32 is 34203999.30046963 s in the future tar: ./usr/include/scsi/fc: time stamp 2026-11-30 05:47:34 is 34204001.29966099 s in the future tar: ./usr/include/scsi: time stamp 2026-11-30 05:47:34 is 34204001.29956999 s in the future tar: ./usr/include/c++/15/backward: time stamp 2026-12-01 22:29:39 is 34350526.28080751 s in the future tar: ./usr/include/c++/15/bits: time stamp 2026-12-01 22:29:39 is 34350526.25605235 s in the future tar: ./usr/include/c++/15/debug: time stamp 2026-12-01 22:29:39 is 34350526.25362131 s in the future tar: ./usr/include/c++/15/decimal: time stamp 2026-12-01 22:29:39 is 34350526.25348823 s in the future tar: ./usr/include/c++/15/experimental/bits: time stamp 2026-12-01 22:29:39 is 34350526.24672343 s in the future tar: ./usr/include/c++/15/experimental: time stamp 2026-12-01 22:29:39 is 34350526.24669391 s in the future tar: ./usr/include/c++/15/ext/pb_ds/detail/bin_search_tree_: time stamp 2026-12-01 22:29:39 is 34350526.24161891 s in the future tar: ./usr/include/c++/15/ext/pb_ds/detail/binary_heap_: time stamp 2026-12-01 22:29:39 is 34350526.24136371 s in the future tar: ./usr/include/c++/15/ext/pb_ds/detail/binomial_heap_: time stamp 2026-12-01 22:29:39 is 34350526.24131211 s in the future tar: ./usr/include/c++/15/ext/pb_ds/detail/binomial_heap_base_: time stamp 2026-12-01 22:29:39 is 34350526.24115799 s in the future tar: ./usr/include/c++/15/ext/pb_ds/detail/branch_policy: time stamp 2026-12-01 22:29:39 is 34350526.24109911 s in the future tar: ./usr/include/c++/15/ext/pb_ds/detail/cc_hash_table_map_: time stamp 2026-12-01 22:29:39 is 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future tar: ./usr/lib/locale/ar_LB/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57567763 s in the future tar: ./usr/lib/locale/ar_LB: time stamp 2026-11-30 05:47:40 is 34204002.57564699 s in the future tar: ./usr/lib/locale/ar_KW.utf8/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57561447 s in the future tar: ./usr/lib/locale/ar_KW.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57558243 s in the future tar: ./usr/lib/locale/ar_KW/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57554935 s in the future tar: ./usr/lib/locale/ar_KW: time stamp 2026-11-30 05:47:40 is 34204002.57551735 s in the future tar: ./usr/lib/locale/ar_JO.utf8/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57546683 s in the future tar: ./usr/lib/locale/ar_JO.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57543287 s in the future tar: ./usr/lib/locale/ar_JO/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57539851 s in the future tar: ./usr/lib/locale/ar_JO: time stamp 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the future tar: ./usr/lib/locale/ar_EG: time stamp 2026-11-30 05:47:40 is 34204002.57503887 s in the future tar: ./usr/lib/locale/ar_DZ.utf8/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57500615 s in the future tar: ./usr/lib/locale/ar_DZ.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57497383 s in the future tar: ./usr/lib/locale/ar_DZ/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57494043 s in the future tar: ./usr/lib/locale/ar_DZ: time stamp 2026-11-30 05:47:40 is 34204002.57488747 s in the future tar: ./usr/lib/locale/ar_BH.utf8/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57484963 s in the future tar: ./usr/lib/locale/ar_BH.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57481747 s in the future tar: ./usr/lib/locale/ar_BH/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57478443 s in the future tar: ./usr/lib/locale/ar_BH: time stamp 2026-11-30 05:47:40 is 34204002.57475219 s in the future tar: ./usr/lib/locale/ar_AE.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57472015 s in the future tar: ./usr/lib/locale/anp_IN: time stamp 2026-11-30 05:47:40 is 34204002.57468767 s in the future tar: ./usr/lib/locale/an_ES.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57465471 s in the future tar: ./usr/lib/locale/am_ET: time stamp 2026-11-30 05:47:40 is 34204002.57462211 s in the future tar: ./usr/lib/locale/ak_GH: time stamp 2026-11-30 05:47:40 is 34204002.57458955 s in the future tar: ./usr/lib/locale/agr_PE: time stamp 2026-11-30 05:47:40 is 34204002.57455703 s in the future tar: ./usr/lib/locale/af_ZA.utf8: time stamp 2026-11-30 05:47:40 is 34204002.57452363 s in the future tar: ./usr/lib/locale/af_ZA: time stamp 2026-11-30 05:47:40 is 34204002.57449127 s in the future tar: ./usr/lib/locale/aa_ET/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57445763 s in the future tar: ./usr/lib/locale/aa_ET: time stamp 2026-11-30 05:47:40 is 34204002.57442511 s in the future tar: ./usr/lib/locale/aa_ER/LC_MESSAGES: time stamp 2026-11-30 05:47:40 is 34204002.57439239 s in the future tar: ./usr/lib/locale/aa_ER: time stamp 2026-11-30 05:47:40 is 34204002.57436027 s in the future tar: ./usr/lib/locale: time stamp 2026-11-30 05:47:40 is 34204002.57432907 s in the future tar: ./usr/lib/aarch64-linux-gnu/perl/cross-config-5.40.1: time stamp 2026-11-30 05:47:34 is 34203996.57429403 s in the future tar: ./usr/lib/aarch64-linux-gnu/perl: time stamp 2026-11-30 05:47:34 is 34203996.57426167 s in the future tar: ./usr/lib/aarch64-linux-gnu: time stamp 2026-12-01 22:29:40 is 34350522.57423019 s in the future tar: ./usr/lib: time stamp 2026-11-30 05:47:35 is 34203997.57419919 s in the future tar: ./usr/include/x86_64-linux-gnux32/asm: time stamp 2026-11-30 05:47:34 is 34203996.57416511 s in the future tar: ./usr/include/x86_64-linux-gnux32: time stamp 2026-11-30 05:47:34 is 34203996.57405375 s in the future tar: ./usr/include/x86_64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57400243 s in the future tar: ./usr/include/x86_64-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57394887 s in the future tar: ./usr/include/sparc64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57387963 s in the future tar: ./usr/include/sparc64-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57383063 s in the future tar: ./usr/include/sh4-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57377647 s in the future tar: ./usr/include/sh4-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57370571 s in the future tar: ./usr/include/s390x-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57366763 s in the future tar: ./usr/include/s390x-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57361795 s in the future tar: ./usr/include/riscv64-linux-gnu/asm/vendor: time stamp 2026-11-30 05:47:34 is 34203996.57357915 s in the future tar: ./usr/include/riscv64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57354663 s in the future tar: 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tar: ./usr/include/mipsel-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57304599 s in the future tar: ./usr/include/mipsel-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57299027 s in the future tar: ./usr/include/mips64el-linux-gnuabi64/asm: time stamp 2026-11-30 05:47:34 is 34203996.57294475 s in the future tar: ./usr/include/mips64el-linux-gnuabi64: time stamp 2026-11-30 05:47:34 is 34203996.57289867 s in the future tar: ./usr/include/mips64-linux-gnuabi64/asm: time stamp 2026-11-30 05:47:34 is 34203996.57285399 s in the future tar: ./usr/include/mips64-linux-gnuabi64: time stamp 2026-11-30 05:47:34 is 34203996.57280747 s in the future tar: ./usr/include/mips-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57276987 s in the future tar: ./usr/include/mips-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57270691 s in the future tar: ./usr/include/m68k-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57265527 s in the future tar: ./usr/include/m68k-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57261195 s in the future tar: ./usr/include/loongarch64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57256623 s in the future tar: ./usr/include/loongarch64-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57252083 s in the future tar: ./usr/include/i386-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57245739 s in the future tar: ./usr/include/i386-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57242159 s in the future tar: ./usr/include/hppa-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57238811 s in the future tar: ./usr/include/hppa-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57235651 s in the future tar: ./usr/include/arm-linux-gnueabihf/asm: time stamp 2026-11-30 05:47:34 is 34203996.57233223 s in the future tar: ./usr/include/arm-linux-gnueabihf: time stamp 2026-11-30 05:47:34 is 34203996.57232443 s in the future tar: ./usr/include/arm-linux-gnueabi/asm: time stamp 2026-11-30 05:47:34 is 34203996.57231671 s in the future tar: ./usr/include/arm-linux-gnueabi: time stamp 2026-11-30 05:47:34 is 34203996.57231035 s in the future tar: ./usr/include/alpha-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57230255 s in the future tar: ./usr/include/alpha-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57229591 s in the future tar: ./usr/include/aarch64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57228831 s in the future tar: ./usr/include/aarch64-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57228227 s in the future tar: ./usr/include: time stamp 2026-11-30 05:47:35 is 34203997.57227591 s in the future tar: ./usr/bin: time stamp 2026-12-01 22:29:40 is 34350522.57226967 s in the future tar: ./usr: time stamp 2026-11-30 05:47:21 is 34203983.57226383 s in the future tar: ./etc/systemd/system/timers.target.wants: time stamp 2026-11-30 05:47:35 is 34203997.57225099 s in the future tar: ./etc/systemd/system: time stamp 2026-11-30 05:47:21 is 34203983.57224491 s in the future tar: ./etc/alternatives: time stamp 2026-11-30 05:47:40 is 34204002.57223467 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [autodock-vina_1.2.7-1.dsc] I: copying [./autodock-vina_1.2.7.orig.tar.gz] I: copying [./autodock-vina_1.2.7-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./autodock-vina_1.2.7-1.dsc: no acceptable signature found dpkg-source: info: extracting autodock-vina in autodock-vina-1.2.7 dpkg-source: info: unpacking autodock-vina_1.2.7.orig.tar.gz dpkg-source: info: unpacking autodock-vina_1.2.7-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove_static.patch dpkg-source: info: applying do_not_link_against_unneeded_libs.patch dpkg-source: info: applying annoying_static_removed_was_in_for_a_reason_questionmark.patch dpkg-source: info: applying fortify.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='38e4c214e07d49bfb477bef998b47bb4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15575' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_EJ5N --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1 --logfile b1/build.log autodock-vina_1.2.7-1.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libboost-all-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19971 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gcc-14-base{a} gettext{a} gettext-base{a} gfortran-15{a} gfortran-15-aarch64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libcbor0.10{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgcc-14-dev{a} libgfortran-15-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu76{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi40{a} libpciaccess0{a} libpipeline1{a} libpmix2t64{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} librdmacm1t64{a} libreadline8t64{a} libstdc++-14-dev{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} python3{a} python3-dev{a} python3-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libmail-sendmail-perl lynx wget xauth 0 packages upgraded, 226 newly installed, 0 to remove and 0 not upgraded. Need to get 159 MB of archives. After unpacking 933 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.9-1 [858 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.9-1 [2061 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 14.0.0 [30.8 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.9-1 [1900 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.9-1 [764 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 libfido2-1 arm64 1.16.0-2 [74.4 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 32 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 openssh-client arm64 1:10.2p1-2 [951 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 automake all 1:1.18.1-2 [877 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-7 [540 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 46 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.6+dfsg-0.1 [601 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 debhelper all 13.28 [941 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 gcc-14-base arm64 14.3.0-10 [52.4 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-7 [371 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libgfortran-15-dev arm64 15.2.0-7 [411 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-7 [10.8 MB] Get: 58 http://deb.debian.org/debian forky/main arm64 gfortran-15 arm64 15.2.0-7 [18.0 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 libnl-3-200 arm64 3.11.0-2 [57.9 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libnl-route-3-200 arm64 3.11.0-2 [176 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libibverbs1 arm64 56.1-1+b1 [59.8 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 ibverbs-providers arm64 56.1-1+b1 [338 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libicu76 arm64 76.1-4 [9524 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 icu-devtools arm64 76.1-4 [200 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 libllvm17t64 arm64 1:17.0.6-22+b3 [21.3 MB] Get: 67 http://deb.debian.org/debian forky/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Get: 68 http://deb.debian.org/debian forky/main arm64 libdrm-common all 2.4.127-1 [9060 B] Get: 69 http://deb.debian.org/debian forky/main arm64 libdrm2 arm64 2.4.127-1 [38.3 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 libdrm-amdgpu1 arm64 2.4.127-1 [22.7 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 libnuma1 arm64 2.0.19-1 [21.6 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 libhsakmt1 arm64 6.2.4+ds-1 [58.3 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 libhsa-runtime64-1 arm64 6.1.2-3 [302 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 libamdhip64-5 arm64 5.7.1-7 [8835 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 libgcc-14-dev arm64 14.3.0-10 [2366 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 libstdc++-14-dev arm64 14.3.0-10 [2568 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libboost1.83-dev arm64 1.83.0-5 [10.6 MB] Get: 78 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.83.0 arm64 1.83.0-5 [234 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.83-dev arm64 1.83.0-5 [235 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libboost-atomic-dev arm64 1.83.0.2+b2 [3892 B] Get: 81 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.83.0t64 arm64 1.83.0-5 [240 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.83-dev arm64 1.83.0-5 [245 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libboost-chrono-dev arm64 1.83.0.2+b2 [4212 B] Get: 84 http://deb.debian.org/debian forky/main arm64 libboost-container1.83.0 arm64 1.83.0-5 [259 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libboost-container1.83-dev arm64 1.83.0-5 [265 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libboost-container-dev arm64 1.83.0.2+b2 [4064 B] Get: 87 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.83.0 arm64 1.83.0-5 [231 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.83.0 arm64 1.83.0-5 [325 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.83-dev arm64 1.83.0-5 [374 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.83-dev arm64 1.83.0-5 [239 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libboost-system1.83.0 arm64 1.83.0-5 [231 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libboost-system1.83-dev arm64 1.83.0-5 [232 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 libboost-thread1.83.0 arm64 1.83.0-5 [266 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libboost-thread1.83-dev arm64 1.83.0-5 [277 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libboost-context1.83.0 arm64 1.83.0-5 [232 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libboost-context1.83-dev arm64 1.83.0-5 [233 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libboost-context-dev arm64 1.83.0.2+b2 [3792 B] Get: 98 http://deb.debian.org/debian forky/main arm64 libboost-coroutine1.83.0 arm64 1.83.0-5 [235 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libboost-coroutine1.83-dev arm64 1.83.0-5 [237 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libboost-coroutine-dev arm64 1.83.0.2+b2 [3860 B] Get: 101 http://deb.debian.org/debian forky/main arm64 libboost-date-time-dev arm64 1.83.0.2+b2 [3584 B] Get: 102 http://deb.debian.org/debian forky/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get: 103 http://deb.debian.org/debian forky/main arm64 libboost-exception1.83-dev arm64 1.83.0-5 [230 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 libboost-exception-dev arm64 1.83.0.2+b2 [3572 B] Get: 105 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.83.0 arm64 1.83.0-5 [273 kB] Get: 106 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.83-dev arm64 1.83.0-5 [293 kB] Get: 107 http://deb.debian.org/debian forky/main arm64 libboost-fiber1.83.0 arm64 1.83.0-5 [253 kB] Get: 108 http://deb.debian.org/debian forky/main arm64 libboost-fiber1.83-dev arm64 1.83.0-5 [265 kB] Get: 109 http://deb.debian.org/debian forky/main arm64 libboost-fiber-dev arm64 1.83.0.2+b2 [4016 B] Get: 110 http://deb.debian.org/debian forky/main arm64 libboost-filesystem-dev arm64 1.83.0.2+b2 [3616 B] Get: 111 http://deb.debian.org/debian forky/main arm64 libboost-graph1.83.0 arm64 1.83.0-5 [342 kB] Get: 112 http://deb.debian.org/debian forky/main arm64 libboost-regex1.83.0 arm64 1.83.0-5 [314 kB] Get: 113 http://deb.debian.org/debian forky/main arm64 libicu-dev arm64 76.1-4 [10.6 MB] Get: 114 http://deb.debian.org/debian forky/main arm64 libboost-regex1.83-dev arm64 1.83.0-5 [335 kB] Get: 115 http://deb.debian.org/debian forky/main arm64 libboost-test1.83.0 arm64 1.83.0-5 [438 kB] Get: 116 http://deb.debian.org/debian forky/main arm64 libboost-test1.83-dev arm64 1.83.0-5 [527 kB] Get: 117 http://deb.debian.org/debian forky/main arm64 libboost-graph1.83-dev arm64 1.83.0-5 [373 kB] Get: 118 http://deb.debian.org/debian forky/main arm64 libboost-graph-dev arm64 1.83.0.2+b2 [3688 B] Get: 119 http://deb.debian.org/debian forky/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Get: 120 http://deb.debian.org/debian forky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Get: 121 http://deb.debian.org/debian forky/main arm64 librdmacm1t64 arm64 56.1-1+b1 [67.9 kB] Get: 122 http://deb.debian.org/debian forky/main arm64 libfabric1 arm64 2.1.0-1.1 [548 kB] Get: 123 http://deb.debian.org/debian forky/main arm64 libhwloc15 arm64 2.12.2-1 [142 kB] Get: 124 http://deb.debian.org/debian forky/main arm64 libmunge2 arm64 0.5.16-1 [19.2 kB] Get: 125 http://deb.debian.org/debian forky/main arm64 libpciaccess0 arm64 0.17-3+b3 [51.2 kB] Get: 126 http://deb.debian.org/debian forky/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 127 http://deb.debian.org/debian forky/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 128 http://deb.debian.org/debian forky/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 129 http://deb.debian.org/debian forky/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 130 http://deb.debian.org/debian forky/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 131 http://deb.debian.org/debian forky/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 132 http://deb.debian.org/debian forky/main arm64 libxnvctrl0 arm64 535.171.04-1+b2 [14.0 kB] Get: 133 http://deb.debian.org/debian forky/main arm64 ocl-icd-libopencl1 arm64 2.3.4-1 [42.2 kB] Get: 134 http://deb.debian.org/debian forky/main arm64 libhwloc-plugins arm64 2.12.2-1 [18.1 kB] Get: 135 http://deb.debian.org/debian forky/main arm64 libpmix2t64 arm64 6.0.0+really5.0.8-1 [574 kB] Get: 136 http://deb.debian.org/debian forky/main arm64 libibumad3 arm64 56.1-1+b1 [29.3 kB] Get: 137 http://deb.debian.org/debian forky/main arm64 libibmad5 arm64 56.1-1+b1 [42.8 kB] Get: 138 http://deb.debian.org/debian forky/main arm64 libucx0 arm64 1.19.0+ds-1 [1081 kB] Get: 139 http://deb.debian.org/debian forky/main arm64 libopenmpi40 arm64 5.0.8-10+b1 [2104 kB] Get: 140 http://deb.debian.org/debian forky/main arm64 libboost-mpi1.83.0 arm64 1.83.0-5 [268 kB] Get: 141 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel1.83.0 arm64 1.83.0-5 [276 kB] Get: 142 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel1.83-dev arm64 1.83.0-5 [284 kB] Get: 143 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel-dev arm64 1.83.0.2+b2 [3716 B] Get: 144 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.83-dev arm64 1.83.0-5 [261 kB] Get: 145 http://deb.debian.org/debian forky/main arm64 libboost-iostreams-dev arm64 1.83.0.2+b2 [3568 B] Get: 146 http://deb.debian.org/debian forky/main arm64 libboost-json1.83.0 arm64 1.83.0-5 [348 kB] Get: 147 http://deb.debian.org/debian forky/main arm64 libboost-json1.83-dev arm64 1.83.0-5 [372 kB] Get: 148 http://deb.debian.org/debian forky/main arm64 libboost-json-dev arm64 1.83.0.2+b2 [3696 B] Get: 149 http://deb.debian.org/debian forky/main arm64 libboost-locale1.83.0 arm64 1.83.0-5 [441 kB] Get: 150 http://deb.debian.org/debian forky/main arm64 libboost-locale1.83-dev arm64 1.83.0-5 [543 kB] Get: 151 http://deb.debian.org/debian forky/main arm64 libboost-locale-dev arm64 1.83.0.2+b2 [3916 B] Get: 152 http://deb.debian.org/debian forky/main arm64 libboost-log1.83.0 arm64 1.83.0-5 [644 kB] Get: 153 http://deb.debian.org/debian forky/main arm64 libboost-log1.83-dev arm64 1.83.0-5 [850 kB] Get: 154 http://deb.debian.org/debian forky/main arm64 libboost-log-dev arm64 1.83.0.2+b2 [3788 B] Get: 155 http://deb.debian.org/debian forky/main arm64 libboost-math1.83.0 arm64 1.83.0-5 [471 kB] Get: 156 http://deb.debian.org/debian forky/main arm64 libboost-math1.83-dev arm64 1.83.0-5 [536 kB] Get: 157 http://deb.debian.org/debian forky/main arm64 libboost-math-dev arm64 1.83.0.2+b2 [3784 B] Get: 158 http://deb.debian.org/debian forky/main arm64 openmpi-common all 5.0.8-10 [97.5 kB] Get: 159 http://deb.debian.org/debian forky/main arm64 libnl-3-dev arm64 3.11.0-2 [104 kB] Get: 160 http://deb.debian.org/debian forky/main arm64 libnl-route-3-dev arm64 3.11.0-2 [210 kB] Get: 161 http://deb.debian.org/debian forky/main arm64 libibverbs-dev arm64 56.1-1+b1 [649 kB] Get: 162 http://deb.debian.org/debian forky/main arm64 libnuma-dev arm64 2.0.19-1 [37.6 kB] Get: 163 http://deb.debian.org/debian forky/main arm64 libltdl7 arm64 2.5.4-7 [415 kB] Get: 164 http://deb.debian.org/debian forky/main arm64 libltdl-dev arm64 2.5.4-7 [168 kB] Get: 165 http://deb.debian.org/debian forky/main arm64 libhwloc-dev arm64 2.12.2-1 [239 kB] Get: 166 http://deb.debian.org/debian forky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 167 http://deb.debian.org/debian forky/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-10+b1 [102 kB] Get: 168 http://deb.debian.org/debian forky/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-10+b1 [60.4 kB] Get: 169 http://deb.debian.org/debian forky/main arm64 libevent-dev arm64 2.1.12-stable-10+b1 [304 kB] Get: 170 http://deb.debian.org/debian forky/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get: 171 http://deb.debian.org/debian forky/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 172 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 173 http://deb.debian.org/debian forky/main arm64 openmpi-bin arm64 5.0.8-10+b1 [184 kB] Get: 174 http://deb.debian.org/debian forky/main arm64 libopenmpi-dev arm64 5.0.8-10+b1 [1090 kB] Get: 175 http://deb.debian.org/debian forky/main arm64 mpi-default-dev arm64 1.19 [3432 B] Get: 176 http://deb.debian.org/debian forky/main arm64 libboost-mpi1.83-dev arm64 1.83.0-5 [291 kB] Get: 177 http://deb.debian.org/debian forky/main arm64 libboost-mpi-dev arm64 1.83.0.2+b2 [3668 B] Get: 178 http://deb.debian.org/debian forky/main arm64 libboost-python1.83.0 arm64 1.83.0-5 [296 kB] Get: 179 http://deb.debian.org/debian forky/main arm64 mpi-default-bin arm64 1.19 [2640 B] Get: 180 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python1.83.0 arm64 1.83.0-5 [343 kB] Get: 181 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python1.83-dev arm64 1.83.0-5 [237 kB] Get: 182 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python-dev arm64 1.83.0.2+b2 [3700 B] Get: 183 http://deb.debian.org/debian forky/main arm64 libboost-nowide1.83.0 arm64 1.83.0-5 [234 kB] Get: 184 http://deb.debian.org/debian forky/main arm64 libboost-nowide1.83-dev arm64 1.83.0-5 [236 kB] Get: 185 http://deb.debian.org/debian forky/main arm64 libboost-nowide-dev arm64 1.83.0.2+b2 [3660 B] Get: 186 http://deb.debian.org/debian forky/main arm64 libboost-numpy1.83.0 arm64 1.83.0-5 [241 kB] Get: 187 http://deb.debian.org/debian forky/main arm64 libboost-numpy1.83-dev arm64 1.83.0-5 [246 kB] Get: 188 http://deb.debian.org/debian forky/main arm64 libboost-numpy-dev arm64 1.83.0.2+b2 [3632 B] Get: 189 http://deb.debian.org/debian forky/main arm64 libboost-program-options1.83.0 arm64 1.83.0-5 [331 kB] Get: 190 http://deb.debian.org/debian forky/main arm64 libboost-program-options1.83-dev arm64 1.83.0-5 [369 kB] Get: 191 http://deb.debian.org/debian forky/main arm64 libboost-program-options-dev arm64 1.83.0.2+b2 [3600 B] Get: 192 http://deb.debian.org/debian forky/main arm64 libpython3.13 arm64 3.13.9-1 [2055 kB] Get: 193 http://deb.debian.org/debian forky/main arm64 libexpat1-dev arm64 2.7.3-1 [150 kB] Get: 194 http://deb.debian.org/debian forky/main arm64 libpython3.13-dev arm64 3.13.9-1 [5057 kB] Get: 195 http://deb.debian.org/debian forky/main arm64 libpython3-dev arm64 3.13.7-1 [10.5 kB] Get: 196 http://deb.debian.org/debian forky/main arm64 python3.13-dev arm64 3.13.9-1 [504 kB] Get: 197 http://deb.debian.org/debian forky/main arm64 libjs-sphinxdoc all 8.2.3-8 [27.6 kB] Get: 198 http://deb.debian.org/debian forky/main arm64 python3-dev arm64 3.13.7-1 [26.1 kB] Get: 199 http://deb.debian.org/debian forky/main arm64 libboost-python1.83-dev arm64 1.83.0-5 [322 kB] Get: 200 http://deb.debian.org/debian forky/main arm64 libboost-python-dev arm64 1.83.0.2+b2 [3880 B] Get: 201 http://deb.debian.org/debian forky/main arm64 libboost-random1.83.0 arm64 1.83.0-5 [238 kB] Get: 202 http://deb.debian.org/debian forky/main arm64 libboost-random1.83-dev arm64 1.83.0-5 [241 kB] Get: 203 http://deb.debian.org/debian forky/main arm64 libboost-random-dev arm64 1.83.0.2+b2 [3584 B] Get: 204 http://deb.debian.org/debian forky/main arm64 libboost-regex-dev arm64 1.83.0.2+b2 [3852 B] Get: 205 http://deb.debian.org/debian forky/main arm64 libboost-serialization-dev arm64 1.83.0.2+b2 [3816 B] Get: 206 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace1.83.0 arm64 1.83.0-5 [277 kB] Get: 207 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace1.83-dev arm64 1.83.0-5 [245 kB] Get: 208 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace-dev arm64 1.83.0.2+b2 [3580 B] Get: 209 http://deb.debian.org/debian forky/main arm64 libboost-system-dev arm64 1.83.0.2+b2 [3720 B] Get: 210 http://deb.debian.org/debian forky/main arm64 libboost-test-dev arm64 1.83.0.2+b2 [3620 B] Get: 211 http://deb.debian.org/debian forky/main arm64 libboost-thread-dev arm64 1.83.0.2+b2 [3616 B] Get: 212 http://deb.debian.org/debian forky/main arm64 libboost-timer1.83.0 arm64 1.83.0-5 [235 kB] Get: 213 http://deb.debian.org/debian forky/main arm64 libboost-timer1.83-dev arm64 1.83.0-5 [237 kB] Get: 214 http://deb.debian.org/debian forky/main arm64 libboost-timer-dev arm64 1.83.0.2+b2 [3712 B] Get: 215 http://deb.debian.org/debian forky/main arm64 libboost1.83-tools-dev arm64 1.83.0-5 [1408 kB] Get: 216 http://deb.debian.org/debian forky/main arm64 libboost-tools-dev arm64 1.83.0.2+b2 [3764 B] Get: 217 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure1.83.0 arm64 1.83.0-5 [245 kB] Get: 218 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure1.83-dev arm64 1.83.0-5 [250 kB] Get: 219 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure-dev arm64 1.83.0.2+b2 [3676 B] Get: 220 http://deb.debian.org/debian forky/main arm64 libboost-url1.83.0 arm64 1.83.0-5 [328 kB] Get: 221 http://deb.debian.org/debian forky/main arm64 libboost-url1.83-dev arm64 1.83.0-5 [423 kB] Get: 222 http://deb.debian.org/debian forky/main arm64 libboost-url-dev arm64 1.83.0.2+b2 [3720 B] Get: 223 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83.0 arm64 1.83.0-5 [416 kB] Get: 224 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83-dev arm64 1.83.0-5 [492 kB] Get: 225 http://deb.debian.org/debian forky/main arm64 libboost-wave-dev arm64 1.83.0.2+b2 [3616 B] Get: 226 http://deb.debian.org/debian forky/main arm64 libboost-all-dev arm64 1.83.0.2+b2 [3924 B] Fetched 159 MB in 1s (180 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19971 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.3-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.3-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.9-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.9-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.9-1_arm64.deb ... Unpacking python3.13-minimal (3.13.9-1) ... Setting up libpython3.13-minimal:arm64 (3.13.9-1) ... Setting up libexpat1:arm64 (2.7.3-1) ... Setting up python3.13-minimal (3.13.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20305 files and directories currently installed.) 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.9-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.9-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.9-1_arm64.deb ... Unpacking python3.13 (3.13.9-1) ... 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Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../003-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../006-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/autodock-vina-1.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../autodock-vina_1.2.7-1_source.changes dpkg-buildpackage: info: source package autodock-vina dpkg-buildpackage: info: source version 1.2.7-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' dh_clean rm -f build/linux/release/*.o build/linux/release/vina* make[1]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7' debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' /usr/bin/make BASE=/usr -C build/linux/release CLFAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" LDFLAGS="-Wl,-z,relro -Wl,-z,now --lto -g" make[2]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' /bin/sh: 1: git: not found g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o main.o -c ../../../src/main/main.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.h:27, from ../../../src/lib/vina.h:40, from ../../../src/main/main.cpp:30: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o ad4cache.o -c ../../../src/lib/ad4cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/ad4cache.h:37, from ../../../src/lib/ad4cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o cache.o -c ../../../src/lib/cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/cache.h:37, from ../../../src/lib/cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o non_cache.o -c ../../../src/lib/non_cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/szv_grid.h:26, from ../../../src/lib/non_cache.h:27, from ../../../src/lib/non_cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o conf_independent.o -c ../../../src/lib/conf_independent.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/conf_independent.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o coords.o -c ../../../src/lib/coords.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/coords.h:26, from ../../../src/lib/coords.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o grid.o -c ../../../src/lib/grid.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o szv_grid.o -c ../../../src/lib/szv_grid.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/szv_grid.h:26, from ../../../src/lib/szv_grid.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o model.o -c ../../../src/lib/model.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/model.cpp:25: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o monte_carlo.o -c ../../../src/lib/monte_carlo.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/monte_carlo.h:27, from ../../../src/lib/monte_carlo.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o mutate.o -c ../../../src/lib/mutate.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/mutate.h:26, from ../../../src/lib/mutate.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o parallel_mc.o -c ../../../src/lib/parallel_mc.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/monte_carlo.h:27, from ../../../src/lib/parallel_mc.h:26, from ../../../src/lib/parallel_mc.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o parse_pdbqt.o -c ../../../src/lib/parse_pdbqt.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.cpp:34: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o quasi_newton.o -c ../../../src/lib/quasi_newton.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/quasi_newton.h:26, from ../../../src/lib/quasi_newton.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o quaternion.o -c ../../../src/lib/quaternion.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/quaternion.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o random.o -c ../../../src/lib/random.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o utils.o -c ../../../src/lib/utils.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o vina.o -c ../../../src/lib/vina.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.h:27, from ../../../src/lib/vina.h:40, from ../../../src/lib/vina.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -Wl,-z,relro -Wl,-z,now --lto -g -o vina main.o ad4cache.o cache.o non_cache.o conf_independent.o coords.o grid.o szv_grid.o model.o monte_carlo.o mutate.o parallel_mc.o parse_pdbqt.o quasi_newton.o quaternion.o random.o utils.o vina.o -l boost_system -l boost_thread -l boost_filesystem -l boost_program_options lto-wrapper: warning: using serial compilation of 7 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o split.o -c ../../../src/split/split.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -Wl,-z,relro -Wl,-z,now --lto -g -o vina_split split.o -l boost_system -l boost_thread -l boost_filesystem -l boost_program_options make[2]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' make[1]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/autodock-vina/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'autodock-vina-dbgsym' in '../autodock-vina-dbgsym_1.2.7-1_arm64.deb'. dpkg-deb: building package 'autodock-vina' in '../autodock-vina_1.2.7-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../autodock-vina_1.2.7-1_arm64.buildinfo dpkg-genchanges --build=binary -O../autodock-vina_1.2.7-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15575 and its subdirectories I: Current time: Thu Oct 30 08:42:43 -12 2025 I: pbuilder-time-stamp: 1761856963 Thu Oct 30 20:42:43 UTC 2025 I: Signing ./b1/autodock-vina_1.2.7-1_arm64.buildinfo as autodock-vina_1.2.7-1_arm64.buildinfo.asc Thu Oct 30 20:42:43 UTC 2025 I: Signed ./b1/autodock-vina_1.2.7-1_arm64.buildinfo as ./b1/autodock-vina_1.2.7-1_arm64.buildinfo.asc Thu Oct 30 20:42:43 UTC 2025 - build #1 for autodock-vina/forky/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Thu Oct 30 20:42:43 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-F8gGnrEy, removing. /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4: total 16 -rw-rw-r-- 1 jenkins jenkins 2279 Mar 2 2025 autodock-vina_1.2.7-1.dsc drwxrwxr-x 2 jenkins jenkins 4096 Oct 30 20:42 b1 drwxrwxr-x 2 jenkins jenkins 4096 Oct 30 20:40 b2 -rw------- 1 jenkins jenkins 3425 Oct 30 20:40 rbuildlog.1QPysdc /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1: total 49152 -rw-r--r-- 1 jenkins jenkins 3131132 Oct 30 20:42 autodock-vina-dbgsym_1.2.7-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 37512 Oct 30 20:42 autodock-vina_1.2.7-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2279 Oct 30 20:42 autodock-vina_1.2.7-1.dsc -rw-r--r-- 1 jenkins jenkins 11968 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 12850 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1740 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 235752 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 1874 Oct 30 20:42 autodock-vina_1.2.7-1_source.changes -rw-r--r-- 1 jenkins jenkins 46488149 Oct 30 20:42 autodock-vina_1.2.7.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 385354 Oct 30 20:42 build.log /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2: total 0 Thu Oct 30 20:42:46 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 30 08:40:51 -12 2025 I: pbuilder-time-stamp: 1761856851 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] tar: ./build: time stamp 2026-11-30 05:47:35 is 34204002.86979051 s in the future tar: ./dev/null: time stamp 2026-11-30 05:47:21 is 34203988.86963215 s in the future tar: ./dev/zero: time stamp 2026-11-30 05:47:21 is 34203988.86959699 s in the future tar: ./dev/full: time stamp 2026-11-30 05:47:21 is 34203988.86956579 s in the future tar: ./dev/random: time stamp 2026-11-30 05:47:21 is 34203988.86954415 s in the future tar: ./dev/urandom: time stamp 2026-11-30 05:47:21 is 34203988.86953323 s in the future tar: ./dev/tty: time stamp 2026-11-30 05:47:21 is 34203988.86952487 s in the future tar: ./dev/console: time stamp 2026-11-30 05:47:21 is 34203988.86951611 s in the future tar: ./dev/pts: time stamp 2026-11-30 05:47:21 is 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future tar: ./etc/systemd/system: time stamp 2026-11-30 05:47:21 is 34203983.57224491 s in the future tar: ./etc/alternatives: time stamp 2026-11-30 05:47:40 is 34204002.57223467 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [autodock-vina_1.2.7-1.dsc] I: copying [./autodock-vina_1.2.7.orig.tar.gz] I: copying [./autodock-vina_1.2.7-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./autodock-vina_1.2.7-1.dsc: no acceptable signature found dpkg-source: info: extracting autodock-vina in autodock-vina-1.2.7 dpkg-source: info: unpacking autodock-vina_1.2.7.orig.tar.gz dpkg-source: info: unpacking autodock-vina_1.2.7-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove_static.patch dpkg-source: info: applying do_not_link_against_unneeded_libs.patch dpkg-source: info: applying annoying_static_removed_was_in_for_a_reason_questionmark.patch dpkg-source: info: applying fortify.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='38e4c214e07d49bfb477bef998b47bb4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15575' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_EJ5N --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1 --logfile b1/build.log autodock-vina_1.2.7-1.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libboost-all-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19971 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gcc-14-base{a} gettext{a} gettext-base{a} gfortran-15{a} gfortran-15-aarch64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libcbor0.10{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgcc-14-dev{a} libgfortran-15-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu76{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi40{a} libpciaccess0{a} libpipeline1{a} libpmix2t64{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} librdmacm1t64{a} libreadline8t64{a} libstdc++-14-dev{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} python3{a} python3-dev{a} python3-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libmail-sendmail-perl lynx wget xauth 0 packages upgraded, 226 newly installed, 0 to remove and 0 not upgraded. Need to get 159 MB of archives. After unpacking 933 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.9-1 [858 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.9-1 [2061 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 14.0.0 [30.8 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.9-1 [1900 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.9-1 [764 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 libfido2-1 arm64 1.16.0-2 [74.4 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 32 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 openssh-client arm64 1:10.2p1-2 [951 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 automake all 1:1.18.1-2 [877 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-7 [540 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 46 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.6+dfsg-0.1 [601 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 debhelper all 13.28 [941 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 gcc-14-base arm64 14.3.0-10 [52.4 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-7 [371 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libgfortran-15-dev arm64 15.2.0-7 [411 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-7 [10.8 MB] Get: 58 http://deb.debian.org/debian forky/main arm64 gfortran-15 arm64 15.2.0-7 [18.0 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 libnl-3-200 arm64 3.11.0-2 [57.9 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libnl-route-3-200 arm64 3.11.0-2 [176 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libibverbs1 arm64 56.1-1+b1 [59.8 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 ibverbs-providers arm64 56.1-1+b1 [338 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libicu76 arm64 76.1-4 [9524 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 icu-devtools arm64 76.1-4 [200 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 libllvm17t64 arm64 1:17.0.6-22+b3 [21.3 MB] Get: 67 http://deb.debian.org/debian forky/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Get: 68 http://deb.debian.org/debian forky/main arm64 libdrm-common all 2.4.127-1 [9060 B] Get: 69 http://deb.debian.org/debian forky/main arm64 libdrm2 arm64 2.4.127-1 [38.3 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 libdrm-amdgpu1 arm64 2.4.127-1 [22.7 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 libnuma1 arm64 2.0.19-1 [21.6 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 libhsakmt1 arm64 6.2.4+ds-1 [58.3 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 libhsa-runtime64-1 arm64 6.1.2-3 [302 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 libamdhip64-5 arm64 5.7.1-7 [8835 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 libgcc-14-dev arm64 14.3.0-10 [2366 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 libstdc++-14-dev arm64 14.3.0-10 [2568 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libboost1.83-dev arm64 1.83.0-5 [10.6 MB] Get: 78 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.83.0 arm64 1.83.0-5 [234 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.83-dev arm64 1.83.0-5 [235 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libboost-atomic-dev arm64 1.83.0.2+b2 [3892 B] Get: 81 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.83.0t64 arm64 1.83.0-5 [240 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.83-dev arm64 1.83.0-5 [245 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libboost-chrono-dev arm64 1.83.0.2+b2 [4212 B] Get: 84 http://deb.debian.org/debian forky/main arm64 libboost-container1.83.0 arm64 1.83.0-5 [259 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libboost-container1.83-dev arm64 1.83.0-5 [265 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libboost-container-dev arm64 1.83.0.2+b2 [4064 B] Get: 87 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.83.0 arm64 1.83.0-5 [231 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.83.0 arm64 1.83.0-5 [325 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.83-dev arm64 1.83.0-5 [374 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.83-dev arm64 1.83.0-5 [239 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libboost-system1.83.0 arm64 1.83.0-5 [231 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libboost-system1.83-dev arm64 1.83.0-5 [232 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 libboost-thread1.83.0 arm64 1.83.0-5 [266 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libboost-thread1.83-dev arm64 1.83.0-5 [277 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libboost-context1.83.0 arm64 1.83.0-5 [232 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libboost-context1.83-dev arm64 1.83.0-5 [233 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libboost-context-dev arm64 1.83.0.2+b2 [3792 B] Get: 98 http://deb.debian.org/debian forky/main arm64 libboost-coroutine1.83.0 arm64 1.83.0-5 [235 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libboost-coroutine1.83-dev arm64 1.83.0-5 [237 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libboost-coroutine-dev arm64 1.83.0.2+b2 [3860 B] Get: 101 http://deb.debian.org/debian forky/main arm64 libboost-date-time-dev arm64 1.83.0.2+b2 [3584 B] Get: 102 http://deb.debian.org/debian forky/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get: 103 http://deb.debian.org/debian forky/main arm64 libboost-exception1.83-dev arm64 1.83.0-5 [230 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 libboost-exception-dev arm64 1.83.0.2+b2 [3572 B] Get: 105 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.83.0 arm64 1.83.0-5 [273 kB] Get: 106 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.83-dev arm64 1.83.0-5 [293 kB] Get: 107 http://deb.debian.org/debian forky/main arm64 libboost-fiber1.83.0 arm64 1.83.0-5 [253 kB] Get: 108 http://deb.debian.org/debian forky/main arm64 libboost-fiber1.83-dev arm64 1.83.0-5 [265 kB] Get: 109 http://deb.debian.org/debian forky/main arm64 libboost-fiber-dev arm64 1.83.0.2+b2 [4016 B] Get: 110 http://deb.debian.org/debian forky/main arm64 libboost-filesystem-dev arm64 1.83.0.2+b2 [3616 B] Get: 111 http://deb.debian.org/debian forky/main arm64 libboost-graph1.83.0 arm64 1.83.0-5 [342 kB] Get: 112 http://deb.debian.org/debian forky/main arm64 libboost-regex1.83.0 arm64 1.83.0-5 [314 kB] Get: 113 http://deb.debian.org/debian forky/main arm64 libicu-dev arm64 76.1-4 [10.6 MB] Get: 114 http://deb.debian.org/debian forky/main arm64 libboost-regex1.83-dev arm64 1.83.0-5 [335 kB] Get: 115 http://deb.debian.org/debian forky/main arm64 libboost-test1.83.0 arm64 1.83.0-5 [438 kB] Get: 116 http://deb.debian.org/debian forky/main arm64 libboost-test1.83-dev arm64 1.83.0-5 [527 kB] Get: 117 http://deb.debian.org/debian forky/main arm64 libboost-graph1.83-dev arm64 1.83.0-5 [373 kB] Get: 118 http://deb.debian.org/debian forky/main arm64 libboost-graph-dev arm64 1.83.0.2+b2 [3688 B] Get: 119 http://deb.debian.org/debian forky/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Get: 120 http://deb.debian.org/debian forky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Get: 121 http://deb.debian.org/debian forky/main arm64 librdmacm1t64 arm64 56.1-1+b1 [67.9 kB] Get: 122 http://deb.debian.org/debian forky/main arm64 libfabric1 arm64 2.1.0-1.1 [548 kB] Get: 123 http://deb.debian.org/debian forky/main arm64 libhwloc15 arm64 2.12.2-1 [142 kB] Get: 124 http://deb.debian.org/debian forky/main arm64 libmunge2 arm64 0.5.16-1 [19.2 kB] Get: 125 http://deb.debian.org/debian forky/main arm64 libpciaccess0 arm64 0.17-3+b3 [51.2 kB] Get: 126 http://deb.debian.org/debian forky/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 127 http://deb.debian.org/debian forky/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 128 http://deb.debian.org/debian forky/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 129 http://deb.debian.org/debian forky/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 130 http://deb.debian.org/debian forky/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 131 http://deb.debian.org/debian forky/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 132 http://deb.debian.org/debian forky/main arm64 libxnvctrl0 arm64 535.171.04-1+b2 [14.0 kB] Get: 133 http://deb.debian.org/debian forky/main arm64 ocl-icd-libopencl1 arm64 2.3.4-1 [42.2 kB] Get: 134 http://deb.debian.org/debian forky/main arm64 libhwloc-plugins arm64 2.12.2-1 [18.1 kB] Get: 135 http://deb.debian.org/debian forky/main arm64 libpmix2t64 arm64 6.0.0+really5.0.8-1 [574 kB] Get: 136 http://deb.debian.org/debian forky/main arm64 libibumad3 arm64 56.1-1+b1 [29.3 kB] Get: 137 http://deb.debian.org/debian forky/main arm64 libibmad5 arm64 56.1-1+b1 [42.8 kB] Get: 138 http://deb.debian.org/debian forky/main arm64 libucx0 arm64 1.19.0+ds-1 [1081 kB] Get: 139 http://deb.debian.org/debian forky/main arm64 libopenmpi40 arm64 5.0.8-10+b1 [2104 kB] Get: 140 http://deb.debian.org/debian forky/main arm64 libboost-mpi1.83.0 arm64 1.83.0-5 [268 kB] Get: 141 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel1.83.0 arm64 1.83.0-5 [276 kB] Get: 142 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel1.83-dev arm64 1.83.0-5 [284 kB] Get: 143 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel-dev arm64 1.83.0.2+b2 [3716 B] Get: 144 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.83-dev arm64 1.83.0-5 [261 kB] Get: 145 http://deb.debian.org/debian forky/main arm64 libboost-iostreams-dev arm64 1.83.0.2+b2 [3568 B] Get: 146 http://deb.debian.org/debian forky/main arm64 libboost-json1.83.0 arm64 1.83.0-5 [348 kB] Get: 147 http://deb.debian.org/debian forky/main arm64 libboost-json1.83-dev arm64 1.83.0-5 [372 kB] Get: 148 http://deb.debian.org/debian forky/main arm64 libboost-json-dev arm64 1.83.0.2+b2 [3696 B] Get: 149 http://deb.debian.org/debian forky/main arm64 libboost-locale1.83.0 arm64 1.83.0-5 [441 kB] Get: 150 http://deb.debian.org/debian forky/main arm64 libboost-locale1.83-dev arm64 1.83.0-5 [543 kB] Get: 151 http://deb.debian.org/debian forky/main arm64 libboost-locale-dev arm64 1.83.0.2+b2 [3916 B] Get: 152 http://deb.debian.org/debian forky/main arm64 libboost-log1.83.0 arm64 1.83.0-5 [644 kB] Get: 153 http://deb.debian.org/debian forky/main arm64 libboost-log1.83-dev arm64 1.83.0-5 [850 kB] Get: 154 http://deb.debian.org/debian forky/main arm64 libboost-log-dev arm64 1.83.0.2+b2 [3788 B] Get: 155 http://deb.debian.org/debian forky/main arm64 libboost-math1.83.0 arm64 1.83.0-5 [471 kB] Get: 156 http://deb.debian.org/debian forky/main arm64 libboost-math1.83-dev arm64 1.83.0-5 [536 kB] Get: 157 http://deb.debian.org/debian forky/main arm64 libboost-math-dev arm64 1.83.0.2+b2 [3784 B] Get: 158 http://deb.debian.org/debian forky/main arm64 openmpi-common all 5.0.8-10 [97.5 kB] Get: 159 http://deb.debian.org/debian forky/main arm64 libnl-3-dev arm64 3.11.0-2 [104 kB] Get: 160 http://deb.debian.org/debian forky/main arm64 libnl-route-3-dev arm64 3.11.0-2 [210 kB] Get: 161 http://deb.debian.org/debian forky/main arm64 libibverbs-dev arm64 56.1-1+b1 [649 kB] Get: 162 http://deb.debian.org/debian forky/main arm64 libnuma-dev arm64 2.0.19-1 [37.6 kB] Get: 163 http://deb.debian.org/debian forky/main arm64 libltdl7 arm64 2.5.4-7 [415 kB] Get: 164 http://deb.debian.org/debian forky/main arm64 libltdl-dev arm64 2.5.4-7 [168 kB] Get: 165 http://deb.debian.org/debian forky/main arm64 libhwloc-dev arm64 2.12.2-1 [239 kB] Get: 166 http://deb.debian.org/debian forky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 167 http://deb.debian.org/debian forky/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-10+b1 [102 kB] Get: 168 http://deb.debian.org/debian forky/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-10+b1 [60.4 kB] Get: 169 http://deb.debian.org/debian forky/main arm64 libevent-dev arm64 2.1.12-stable-10+b1 [304 kB] Get: 170 http://deb.debian.org/debian forky/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get: 171 http://deb.debian.org/debian forky/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 172 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 173 http://deb.debian.org/debian forky/main arm64 openmpi-bin arm64 5.0.8-10+b1 [184 kB] Get: 174 http://deb.debian.org/debian forky/main arm64 libopenmpi-dev arm64 5.0.8-10+b1 [1090 kB] Get: 175 http://deb.debian.org/debian forky/main arm64 mpi-default-dev arm64 1.19 [3432 B] Get: 176 http://deb.debian.org/debian forky/main arm64 libboost-mpi1.83-dev arm64 1.83.0-5 [291 kB] Get: 177 http://deb.debian.org/debian forky/main arm64 libboost-mpi-dev arm64 1.83.0.2+b2 [3668 B] Get: 178 http://deb.debian.org/debian forky/main arm64 libboost-python1.83.0 arm64 1.83.0-5 [296 kB] Get: 179 http://deb.debian.org/debian forky/main arm64 mpi-default-bin arm64 1.19 [2640 B] Get: 180 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python1.83.0 arm64 1.83.0-5 [343 kB] Get: 181 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python1.83-dev arm64 1.83.0-5 [237 kB] Get: 182 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python-dev arm64 1.83.0.2+b2 [3700 B] Get: 183 http://deb.debian.org/debian forky/main arm64 libboost-nowide1.83.0 arm64 1.83.0-5 [234 kB] Get: 184 http://deb.debian.org/debian forky/main arm64 libboost-nowide1.83-dev arm64 1.83.0-5 [236 kB] Get: 185 http://deb.debian.org/debian forky/main arm64 libboost-nowide-dev arm64 1.83.0.2+b2 [3660 B] Get: 186 http://deb.debian.org/debian forky/main arm64 libboost-numpy1.83.0 arm64 1.83.0-5 [241 kB] Get: 187 http://deb.debian.org/debian forky/main arm64 libboost-numpy1.83-dev arm64 1.83.0-5 [246 kB] Get: 188 http://deb.debian.org/debian forky/main arm64 libboost-numpy-dev arm64 1.83.0.2+b2 [3632 B] Get: 189 http://deb.debian.org/debian forky/main arm64 libboost-program-options1.83.0 arm64 1.83.0-5 [331 kB] Get: 190 http://deb.debian.org/debian forky/main arm64 libboost-program-options1.83-dev arm64 1.83.0-5 [369 kB] Get: 191 http://deb.debian.org/debian forky/main arm64 libboost-program-options-dev arm64 1.83.0.2+b2 [3600 B] Get: 192 http://deb.debian.org/debian forky/main arm64 libpython3.13 arm64 3.13.9-1 [2055 kB] Get: 193 http://deb.debian.org/debian forky/main arm64 libexpat1-dev arm64 2.7.3-1 [150 kB] Get: 194 http://deb.debian.org/debian forky/main arm64 libpython3.13-dev arm64 3.13.9-1 [5057 kB] Get: 195 http://deb.debian.org/debian forky/main arm64 libpython3-dev arm64 3.13.7-1 [10.5 kB] Get: 196 http://deb.debian.org/debian forky/main arm64 python3.13-dev arm64 3.13.9-1 [504 kB] Get: 197 http://deb.debian.org/debian forky/main arm64 libjs-sphinxdoc all 8.2.3-8 [27.6 kB] Get: 198 http://deb.debian.org/debian forky/main arm64 python3-dev arm64 3.13.7-1 [26.1 kB] Get: 199 http://deb.debian.org/debian forky/main arm64 libboost-python1.83-dev arm64 1.83.0-5 [322 kB] Get: 200 http://deb.debian.org/debian forky/main arm64 libboost-python-dev arm64 1.83.0.2+b2 [3880 B] Get: 201 http://deb.debian.org/debian forky/main arm64 libboost-random1.83.0 arm64 1.83.0-5 [238 kB] Get: 202 http://deb.debian.org/debian forky/main arm64 libboost-random1.83-dev arm64 1.83.0-5 [241 kB] Get: 203 http://deb.debian.org/debian forky/main arm64 libboost-random-dev arm64 1.83.0.2+b2 [3584 B] Get: 204 http://deb.debian.org/debian forky/main arm64 libboost-regex-dev arm64 1.83.0.2+b2 [3852 B] Get: 205 http://deb.debian.org/debian forky/main arm64 libboost-serialization-dev arm64 1.83.0.2+b2 [3816 B] Get: 206 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace1.83.0 arm64 1.83.0-5 [277 kB] Get: 207 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace1.83-dev arm64 1.83.0-5 [245 kB] Get: 208 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace-dev arm64 1.83.0.2+b2 [3580 B] Get: 209 http://deb.debian.org/debian forky/main arm64 libboost-system-dev arm64 1.83.0.2+b2 [3720 B] Get: 210 http://deb.debian.org/debian forky/main arm64 libboost-test-dev arm64 1.83.0.2+b2 [3620 B] Get: 211 http://deb.debian.org/debian forky/main arm64 libboost-thread-dev arm64 1.83.0.2+b2 [3616 B] Get: 212 http://deb.debian.org/debian forky/main arm64 libboost-timer1.83.0 arm64 1.83.0-5 [235 kB] Get: 213 http://deb.debian.org/debian forky/main arm64 libboost-timer1.83-dev arm64 1.83.0-5 [237 kB] Get: 214 http://deb.debian.org/debian forky/main arm64 libboost-timer-dev arm64 1.83.0.2+b2 [3712 B] Get: 215 http://deb.debian.org/debian forky/main arm64 libboost1.83-tools-dev arm64 1.83.0-5 [1408 kB] Get: 216 http://deb.debian.org/debian forky/main arm64 libboost-tools-dev arm64 1.83.0.2+b2 [3764 B] Get: 217 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure1.83.0 arm64 1.83.0-5 [245 kB] Get: 218 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure1.83-dev arm64 1.83.0-5 [250 kB] Get: 219 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure-dev arm64 1.83.0.2+b2 [3676 B] Get: 220 http://deb.debian.org/debian forky/main arm64 libboost-url1.83.0 arm64 1.83.0-5 [328 kB] Get: 221 http://deb.debian.org/debian forky/main arm64 libboost-url1.83-dev arm64 1.83.0-5 [423 kB] Get: 222 http://deb.debian.org/debian forky/main arm64 libboost-url-dev arm64 1.83.0.2+b2 [3720 B] Get: 223 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83.0 arm64 1.83.0-5 [416 kB] Get: 224 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83-dev arm64 1.83.0-5 [492 kB] Get: 225 http://deb.debian.org/debian forky/main arm64 libboost-wave-dev arm64 1.83.0.2+b2 [3616 B] Get: 226 http://deb.debian.org/debian forky/main arm64 libboost-all-dev arm64 1.83.0.2+b2 [3924 B] Fetched 159 MB in 1s (180 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19971 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.3-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.3-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.9-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.9-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.9-1_arm64.deb ... Unpacking python3.13-minimal (3.13.9-1) ... Setting up libpython3.13-minimal:arm64 (3.13.9-1) ... Setting up libexpat1:arm64 (2.7.3-1) ... Setting up python3.13-minimal (3.13.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20305 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_arm64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_14.0.0_all.deb ... Unpacking media-types (14.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.3-3_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.9-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.9-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.9-1_arm64.deb ... Unpacking python3.13 (3.13.9-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21320 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.7-1_arm64.deb ... Unpacking python3 (3.13.7-1) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/autodock-vina-1.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../autodock-vina_1.2.7-1_source.changes dpkg-buildpackage: info: source package autodock-vina dpkg-buildpackage: info: source version 1.2.7-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' dh_clean rm -f build/linux/release/*.o build/linux/release/vina* make[1]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7' debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' /usr/bin/make BASE=/usr -C build/linux/release CLFAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" LDFLAGS="-Wl,-z,relro -Wl,-z,now --lto -g" make[2]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' /bin/sh: 1: git: not found g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o main.o -c ../../../src/main/main.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.h:27, from ../../../src/lib/vina.h:40, from ../../../src/main/main.cpp:30: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o ad4cache.o -c ../../../src/lib/ad4cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/ad4cache.h:37, from ../../../src/lib/ad4cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o cache.o -c ../../../src/lib/cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/cache.h:37, from ../../../src/lib/cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o non_cache.o -c ../../../src/lib/non_cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/szv_grid.h:26, from ../../../src/lib/non_cache.h:27, from ../../../src/lib/non_cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o conf_independent.o -c ../../../src/lib/conf_independent.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/conf_independent.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o coords.o -c ../../../src/lib/coords.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/coords.h:26, from ../../../src/lib/coords.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o grid.o -c ../../../src/lib/grid.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o szv_grid.o -c ../../../src/lib/szv_grid.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/szv_grid.h:26, from ../../../src/lib/szv_grid.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o model.o -c ../../../src/lib/model.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/model.cpp:25: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o monte_carlo.o -c ../../../src/lib/monte_carlo.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/monte_carlo.h:27, from ../../../src/lib/monte_carlo.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o mutate.o -c ../../../src/lib/mutate.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/mutate.h:26, from ../../../src/lib/mutate.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o parallel_mc.o -c ../../../src/lib/parallel_mc.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/monte_carlo.h:27, from ../../../src/lib/parallel_mc.h:26, from ../../../src/lib/parallel_mc.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o parse_pdbqt.o -c ../../../src/lib/parse_pdbqt.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.cpp:34: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o quasi_newton.o -c ../../../src/lib/quasi_newton.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/quasi_newton.h:26, from ../../../src/lib/quasi_newton.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o quaternion.o -c ../../../src/lib/quaternion.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/quaternion.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o random.o -c ../../../src/lib/random.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o utils.o -c ../../../src/lib/utils.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o vina.o -c ../../../src/lib/vina.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.h:27, from ../../../src/lib/vina.h:40, from ../../../src/lib/vina.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -Wl,-z,relro -Wl,-z,now --lto -g -o vina main.o ad4cache.o cache.o non_cache.o conf_independent.o coords.o grid.o szv_grid.o model.o monte_carlo.o mutate.o parallel_mc.o parse_pdbqt.o quasi_newton.o quaternion.o random.o utils.o vina.o -l boost_system -l boost_thread -l boost_filesystem -l boost_program_options lto-wrapper: warning: using serial compilation of 7 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o split.o -c ../../../src/split/split.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -Wl,-z,relro -Wl,-z,now --lto -g -o vina_split split.o -l boost_system -l boost_thread -l boost_filesystem -l boost_program_options make[2]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' make[1]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/autodock-vina/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'autodock-vina-dbgsym' in '../autodock-vina-dbgsym_1.2.7-1_arm64.deb'. dpkg-deb: building package 'autodock-vina' in '../autodock-vina_1.2.7-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../autodock-vina_1.2.7-1_arm64.buildinfo dpkg-genchanges --build=binary -O../autodock-vina_1.2.7-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15575 and its subdirectories I: Current time: Thu Oct 30 08:42:43 -12 2025 I: pbuilder-time-stamp: 1761856963 Thu Oct 30 20:42:47 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Thu Oct 30 20:42:47 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Thu Oct 30 20:42:47 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Thu Oct 30 20:42:47 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-fkPzLk' ==================================================================================== Thu Oct 30 20:42:48 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink04-arm64, called using "2 autodock-vina forky /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4 1.2.7-1" as arguments. Thu Oct 30 20:42:48 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-Nj0rA46b" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Oct 30 20:42:48 UTC 2025 I: Downloading source for forky/autodock-vina=1.2.7-1 Reading package lists... NOTICE: 'autodock-vina' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/autodock-vina.git Please use: git clone https://salsa.debian.org/med-team/autodock-vina.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.5 MB of source archives. Get:1 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (dsc) [2279 B] Get:2 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (tar) [46.5 MB] Get:3 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (diff) [37.5 kB] Fetched 46.5 MB in 0s (153 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'autodock-vina' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/autodock-vina.git Please use: git clone https://salsa.debian.org/med-team/autodock-vina.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.5 MB of source archives. Get:1 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (dsc) [2279 B] Get:2 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (tar) [46.5 MB] Get:3 http://deb.debian.org/debian forky/main autodock-vina 1.2.7-1 (diff) [37.5 kB] Fetched 46.5 MB in 0s (153 MB/s) Download complete and in download only mode ============================================================================= Re-Building autodock-vina in forky on arm64 on codethink04-arm64 now. Date: Thu Oct 30 20:42:48 GMT 2025 Date UTC: Thu Oct 30 20:42:48 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4 + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_7ejZ + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' autodock-vina = debian-installer -o autodock-vina = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' autodock-vina = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_7ejZ --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2 --logfile b2/build.log autodock-vina_1.2.7-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Oct 31 10:42:48 +14 2025 I: pbuilder-time-stamp: 1761856968 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [autodock-vina_1.2.7-1.dsc] I: copying [./autodock-vina_1.2.7.orig.tar.gz] I: copying [./autodock-vina_1.2.7-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./autodock-vina_1.2.7-1.dsc: no acceptable signature found dpkg-source: info: extracting autodock-vina in autodock-vina-1.2.7 dpkg-source: info: unpacking autodock-vina_1.2.7.orig.tar.gz dpkg-source: info: unpacking autodock-vina_1.2.7-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove_static.patch dpkg-source: info: applying do_not_link_against_unneeded_libs.patch dpkg-source: info: applying annoying_static_removed_was_in_for_a_reason_questionmark.patch dpkg-source: info: applying fortify.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D01_modify_environment starting debug: Running on codethink04-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Oct 30 20:42 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=forky EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=d500ea3b05364bb4a9f105ada1b060cf LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3462567 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_7ejZ --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2 --logfile b2/build.log autodock-vina_1.2.7-1.dsc' SUDO_GID=109 SUDO_HOME=/var/lib/jenkins SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libboost-all-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19971 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gcc-14-base{a} gettext{a} gettext-base{a} gfortran-15{a} gfortran-15-aarch64-linux-gnu{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libcbor0.10{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgcc-14-dev{a} libgfortran-15-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu76{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi40{a} libpciaccess0{a} libpipeline1{a} libpmix2t64{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} librdmacm1t64{a} libreadline8t64{a} libstdc++-14-dev{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2-16{a} libxnvctrl0{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} python3{a} python3-dev{a} python3-minimal{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libmail-sendmail-perl lynx wget xauth 0 packages upgraded, 226 newly installed, 0 to remove and 0 not upgraded. Need to get 159 MB of archives. After unpacking 933 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.9-1 [858 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.9-1 [2061 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 14.0.0 [30.8 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.9-1 [1900 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.9-1 [764 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 libfido2-1 arm64 1.16.0-2 [74.4 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 32 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 openssh-client arm64 1:10.2p1-2 [951 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 automake all 1:1.18.1-2 [877 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-7 [540 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 45 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 46 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.6+dfsg-0.1 [601 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 debhelper all 13.28 [941 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 gcc-14-base arm64 14.3.0-10 [52.4 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-7 [371 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libgfortran-15-dev arm64 15.2.0-7 [411 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 gfortran-15-aarch64-linux-gnu arm64 15.2.0-7 [10.8 MB] Get: 58 http://deb.debian.org/debian forky/main arm64 gfortran-15 arm64 15.2.0-7 [18.0 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 libnl-3-200 arm64 3.11.0-2 [57.9 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libnl-route-3-200 arm64 3.11.0-2 [176 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libibverbs1 arm64 56.1-1+b1 [59.8 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 ibverbs-providers arm64 56.1-1+b1 [338 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libicu76 arm64 76.1-4 [9524 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 icu-devtools arm64 76.1-4 [200 kB] Get: 65 http://deb.debian.org/debian forky/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 libllvm17t64 arm64 1:17.0.6-22+b3 [21.3 MB] Get: 67 http://deb.debian.org/debian forky/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Get: 68 http://deb.debian.org/debian forky/main arm64 libdrm-common all 2.4.127-1 [9060 B] Get: 69 http://deb.debian.org/debian forky/main arm64 libdrm2 arm64 2.4.127-1 [38.3 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 libdrm-amdgpu1 arm64 2.4.127-1 [22.7 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 libnuma1 arm64 2.0.19-1 [21.6 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 libhsakmt1 arm64 6.2.4+ds-1 [58.3 kB] Get: 73 http://deb.debian.org/debian forky/main arm64 libhsa-runtime64-1 arm64 6.1.2-3 [302 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 libamdhip64-5 arm64 5.7.1-7 [8835 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 libgcc-14-dev arm64 14.3.0-10 [2366 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 libstdc++-14-dev arm64 14.3.0-10 [2568 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 libboost1.83-dev arm64 1.83.0-5 [10.6 MB] Get: 78 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.83.0 arm64 1.83.0-5 [234 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 libboost-atomic1.83-dev arm64 1.83.0-5 [235 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libboost-atomic-dev arm64 1.83.0.2+b2 [3892 B] Get: 81 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.83.0t64 arm64 1.83.0-5 [240 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 libboost-chrono1.83-dev arm64 1.83.0-5 [245 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 libboost-chrono-dev arm64 1.83.0.2+b2 [4212 B] Get: 84 http://deb.debian.org/debian forky/main arm64 libboost-container1.83.0 arm64 1.83.0-5 [259 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libboost-container1.83-dev arm64 1.83.0-5 [265 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libboost-container-dev arm64 1.83.0.2+b2 [4064 B] Get: 87 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.83.0 arm64 1.83.0-5 [231 kB] Get: 88 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.83.0 arm64 1.83.0-5 [325 kB] Get: 89 http://deb.debian.org/debian forky/main arm64 libboost-serialization1.83-dev arm64 1.83.0-5 [374 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 libboost-date-time1.83-dev arm64 1.83.0-5 [239 kB] Get: 91 http://deb.debian.org/debian forky/main arm64 libboost-system1.83.0 arm64 1.83.0-5 [231 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 libboost-system1.83-dev arm64 1.83.0-5 [232 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 libboost-thread1.83.0 arm64 1.83.0-5 [266 kB] Get: 94 http://deb.debian.org/debian forky/main arm64 libboost-thread1.83-dev arm64 1.83.0-5 [277 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 libboost-context1.83.0 arm64 1.83.0-5 [232 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 libboost-context1.83-dev arm64 1.83.0-5 [233 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 libboost-context-dev arm64 1.83.0.2+b2 [3792 B] Get: 98 http://deb.debian.org/debian forky/main arm64 libboost-coroutine1.83.0 arm64 1.83.0-5 [235 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 libboost-coroutine1.83-dev arm64 1.83.0-5 [237 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 libboost-coroutine-dev arm64 1.83.0.2+b2 [3860 B] Get: 101 http://deb.debian.org/debian forky/main arm64 libboost-date-time-dev arm64 1.83.0.2+b2 [3584 B] Get: 102 http://deb.debian.org/debian forky/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get: 103 http://deb.debian.org/debian forky/main arm64 libboost-exception1.83-dev arm64 1.83.0-5 [230 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 libboost-exception-dev arm64 1.83.0.2+b2 [3572 B] Get: 105 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.83.0 arm64 1.83.0-5 [273 kB] Get: 106 http://deb.debian.org/debian forky/main arm64 libboost-filesystem1.83-dev arm64 1.83.0-5 [293 kB] Get: 107 http://deb.debian.org/debian forky/main arm64 libboost-fiber1.83.0 arm64 1.83.0-5 [253 kB] Get: 108 http://deb.debian.org/debian forky/main arm64 libboost-fiber1.83-dev arm64 1.83.0-5 [265 kB] Get: 109 http://deb.debian.org/debian forky/main arm64 libboost-fiber-dev arm64 1.83.0.2+b2 [4016 B] Get: 110 http://deb.debian.org/debian forky/main arm64 libboost-filesystem-dev arm64 1.83.0.2+b2 [3616 B] Get: 111 http://deb.debian.org/debian forky/main arm64 libboost-graph1.83.0 arm64 1.83.0-5 [342 kB] Get: 112 http://deb.debian.org/debian forky/main arm64 libboost-regex1.83.0 arm64 1.83.0-5 [314 kB] Get: 113 http://deb.debian.org/debian forky/main arm64 libicu-dev arm64 76.1-4 [10.6 MB] Get: 114 http://deb.debian.org/debian forky/main arm64 libboost-regex1.83-dev arm64 1.83.0-5 [335 kB] Get: 115 http://deb.debian.org/debian forky/main arm64 libboost-test1.83.0 arm64 1.83.0-5 [438 kB] Get: 116 http://deb.debian.org/debian forky/main arm64 libboost-test1.83-dev arm64 1.83.0-5 [527 kB] Get: 117 http://deb.debian.org/debian forky/main arm64 libboost-graph1.83-dev arm64 1.83.0-5 [373 kB] Get: 118 http://deb.debian.org/debian forky/main arm64 libboost-graph-dev arm64 1.83.0.2+b2 [3688 B] Get: 119 http://deb.debian.org/debian forky/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Get: 120 http://deb.debian.org/debian forky/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Get: 121 http://deb.debian.org/debian forky/main arm64 librdmacm1t64 arm64 56.1-1+b1 [67.9 kB] Get: 122 http://deb.debian.org/debian forky/main arm64 libfabric1 arm64 2.1.0-1.1 [548 kB] Get: 123 http://deb.debian.org/debian forky/main arm64 libhwloc15 arm64 2.12.2-1 [142 kB] Get: 124 http://deb.debian.org/debian forky/main arm64 libmunge2 arm64 0.5.16-1 [19.2 kB] Get: 125 http://deb.debian.org/debian forky/main arm64 libpciaccess0 arm64 0.17-3+b3 [51.2 kB] Get: 126 http://deb.debian.org/debian forky/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 127 http://deb.debian.org/debian forky/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 128 http://deb.debian.org/debian forky/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 129 http://deb.debian.org/debian forky/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Get: 130 http://deb.debian.org/debian forky/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Get: 131 http://deb.debian.org/debian forky/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Get: 132 http://deb.debian.org/debian forky/main arm64 libxnvctrl0 arm64 535.171.04-1+b2 [14.0 kB] Get: 133 http://deb.debian.org/debian forky/main arm64 ocl-icd-libopencl1 arm64 2.3.4-1 [42.2 kB] Get: 134 http://deb.debian.org/debian forky/main arm64 libhwloc-plugins arm64 2.12.2-1 [18.1 kB] Get: 135 http://deb.debian.org/debian forky/main arm64 libpmix2t64 arm64 6.0.0+really5.0.8-1 [574 kB] Get: 136 http://deb.debian.org/debian forky/main arm64 libibumad3 arm64 56.1-1+b1 [29.3 kB] Get: 137 http://deb.debian.org/debian forky/main arm64 libibmad5 arm64 56.1-1+b1 [42.8 kB] Get: 138 http://deb.debian.org/debian forky/main arm64 libucx0 arm64 1.19.0+ds-1 [1081 kB] Get: 139 http://deb.debian.org/debian forky/main arm64 libopenmpi40 arm64 5.0.8-10+b1 [2104 kB] Get: 140 http://deb.debian.org/debian forky/main arm64 libboost-mpi1.83.0 arm64 1.83.0-5 [268 kB] Get: 141 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel1.83.0 arm64 1.83.0-5 [276 kB] Get: 142 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel1.83-dev arm64 1.83.0-5 [284 kB] Get: 143 http://deb.debian.org/debian forky/main arm64 libboost-graph-parallel-dev arm64 1.83.0.2+b2 [3716 B] Get: 144 http://deb.debian.org/debian forky/main arm64 libboost-iostreams1.83-dev arm64 1.83.0-5 [261 kB] Get: 145 http://deb.debian.org/debian forky/main arm64 libboost-iostreams-dev arm64 1.83.0.2+b2 [3568 B] Get: 146 http://deb.debian.org/debian forky/main arm64 libboost-json1.83.0 arm64 1.83.0-5 [348 kB] Get: 147 http://deb.debian.org/debian forky/main arm64 libboost-json1.83-dev arm64 1.83.0-5 [372 kB] Get: 148 http://deb.debian.org/debian forky/main arm64 libboost-json-dev arm64 1.83.0.2+b2 [3696 B] Get: 149 http://deb.debian.org/debian forky/main arm64 libboost-locale1.83.0 arm64 1.83.0-5 [441 kB] Get: 150 http://deb.debian.org/debian forky/main arm64 libboost-locale1.83-dev arm64 1.83.0-5 [543 kB] Get: 151 http://deb.debian.org/debian forky/main arm64 libboost-locale-dev arm64 1.83.0.2+b2 [3916 B] Get: 152 http://deb.debian.org/debian forky/main arm64 libboost-log1.83.0 arm64 1.83.0-5 [644 kB] Get: 153 http://deb.debian.org/debian forky/main arm64 libboost-log1.83-dev arm64 1.83.0-5 [850 kB] Get: 154 http://deb.debian.org/debian forky/main arm64 libboost-log-dev arm64 1.83.0.2+b2 [3788 B] Get: 155 http://deb.debian.org/debian forky/main arm64 libboost-math1.83.0 arm64 1.83.0-5 [471 kB] Get: 156 http://deb.debian.org/debian forky/main arm64 libboost-math1.83-dev arm64 1.83.0-5 [536 kB] Get: 157 http://deb.debian.org/debian forky/main arm64 libboost-math-dev arm64 1.83.0.2+b2 [3784 B] Get: 158 http://deb.debian.org/debian forky/main arm64 openmpi-common all 5.0.8-10 [97.5 kB] Get: 159 http://deb.debian.org/debian forky/main arm64 libnl-3-dev arm64 3.11.0-2 [104 kB] Get: 160 http://deb.debian.org/debian forky/main arm64 libnl-route-3-dev arm64 3.11.0-2 [210 kB] Get: 161 http://deb.debian.org/debian forky/main arm64 libibverbs-dev arm64 56.1-1+b1 [649 kB] Get: 162 http://deb.debian.org/debian forky/main arm64 libnuma-dev arm64 2.0.19-1 [37.6 kB] Get: 163 http://deb.debian.org/debian forky/main arm64 libltdl7 arm64 2.5.4-7 [415 kB] Get: 164 http://deb.debian.org/debian forky/main arm64 libltdl-dev arm64 2.5.4-7 [168 kB] Get: 165 http://deb.debian.org/debian forky/main arm64 libhwloc-dev arm64 2.12.2-1 [239 kB] Get: 166 http://deb.debian.org/debian forky/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 167 http://deb.debian.org/debian forky/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-10+b1 [102 kB] Get: 168 http://deb.debian.org/debian forky/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-10+b1 [60.4 kB] Get: 169 http://deb.debian.org/debian forky/main arm64 libevent-dev arm64 2.1.12-stable-10+b1 [304 kB] Get: 170 http://deb.debian.org/debian forky/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Get: 171 http://deb.debian.org/debian forky/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 172 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 173 http://deb.debian.org/debian forky/main arm64 openmpi-bin arm64 5.0.8-10+b1 [184 kB] Get: 174 http://deb.debian.org/debian forky/main arm64 libopenmpi-dev arm64 5.0.8-10+b1 [1090 kB] Get: 175 http://deb.debian.org/debian forky/main arm64 mpi-default-dev arm64 1.19 [3432 B] Get: 176 http://deb.debian.org/debian forky/main arm64 libboost-mpi1.83-dev arm64 1.83.0-5 [291 kB] Get: 177 http://deb.debian.org/debian forky/main arm64 libboost-mpi-dev arm64 1.83.0.2+b2 [3668 B] Get: 178 http://deb.debian.org/debian forky/main arm64 libboost-python1.83.0 arm64 1.83.0-5 [296 kB] Get: 179 http://deb.debian.org/debian forky/main arm64 mpi-default-bin arm64 1.19 [2640 B] Get: 180 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python1.83.0 arm64 1.83.0-5 [343 kB] Get: 181 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python1.83-dev arm64 1.83.0-5 [237 kB] Get: 182 http://deb.debian.org/debian forky/main arm64 libboost-mpi-python-dev arm64 1.83.0.2+b2 [3700 B] Get: 183 http://deb.debian.org/debian forky/main arm64 libboost-nowide1.83.0 arm64 1.83.0-5 [234 kB] Get: 184 http://deb.debian.org/debian forky/main arm64 libboost-nowide1.83-dev arm64 1.83.0-5 [236 kB] Get: 185 http://deb.debian.org/debian forky/main arm64 libboost-nowide-dev arm64 1.83.0.2+b2 [3660 B] Get: 186 http://deb.debian.org/debian forky/main arm64 libboost-numpy1.83.0 arm64 1.83.0-5 [241 kB] Get: 187 http://deb.debian.org/debian forky/main arm64 libboost-numpy1.83-dev arm64 1.83.0-5 [246 kB] Get: 188 http://deb.debian.org/debian forky/main arm64 libboost-numpy-dev arm64 1.83.0.2+b2 [3632 B] Get: 189 http://deb.debian.org/debian forky/main arm64 libboost-program-options1.83.0 arm64 1.83.0-5 [331 kB] Get: 190 http://deb.debian.org/debian forky/main arm64 libboost-program-options1.83-dev arm64 1.83.0-5 [369 kB] Get: 191 http://deb.debian.org/debian forky/main arm64 libboost-program-options-dev arm64 1.83.0.2+b2 [3600 B] Get: 192 http://deb.debian.org/debian forky/main arm64 libpython3.13 arm64 3.13.9-1 [2055 kB] Get: 193 http://deb.debian.org/debian forky/main arm64 libexpat1-dev arm64 2.7.3-1 [150 kB] Get: 194 http://deb.debian.org/debian forky/main arm64 libpython3.13-dev arm64 3.13.9-1 [5057 kB] Get: 195 http://deb.debian.org/debian forky/main arm64 libpython3-dev arm64 3.13.7-1 [10.5 kB] Get: 196 http://deb.debian.org/debian forky/main arm64 python3.13-dev arm64 3.13.9-1 [504 kB] Get: 197 http://deb.debian.org/debian forky/main arm64 libjs-sphinxdoc all 8.2.3-8 [27.6 kB] Get: 198 http://deb.debian.org/debian forky/main arm64 python3-dev arm64 3.13.7-1 [26.1 kB] Get: 199 http://deb.debian.org/debian forky/main arm64 libboost-python1.83-dev arm64 1.83.0-5 [322 kB] Get: 200 http://deb.debian.org/debian forky/main arm64 libboost-python-dev arm64 1.83.0.2+b2 [3880 B] Get: 201 http://deb.debian.org/debian forky/main arm64 libboost-random1.83.0 arm64 1.83.0-5 [238 kB] Get: 202 http://deb.debian.org/debian forky/main arm64 libboost-random1.83-dev arm64 1.83.0-5 [241 kB] Get: 203 http://deb.debian.org/debian forky/main arm64 libboost-random-dev arm64 1.83.0.2+b2 [3584 B] Get: 204 http://deb.debian.org/debian forky/main arm64 libboost-regex-dev arm64 1.83.0.2+b2 [3852 B] Get: 205 http://deb.debian.org/debian forky/main arm64 libboost-serialization-dev arm64 1.83.0.2+b2 [3816 B] Get: 206 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace1.83.0 arm64 1.83.0-5 [277 kB] Get: 207 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace1.83-dev arm64 1.83.0-5 [245 kB] Get: 208 http://deb.debian.org/debian forky/main arm64 libboost-stacktrace-dev arm64 1.83.0.2+b2 [3580 B] Get: 209 http://deb.debian.org/debian forky/main arm64 libboost-system-dev arm64 1.83.0.2+b2 [3720 B] Get: 210 http://deb.debian.org/debian forky/main arm64 libboost-test-dev arm64 1.83.0.2+b2 [3620 B] Get: 211 http://deb.debian.org/debian forky/main arm64 libboost-thread-dev arm64 1.83.0.2+b2 [3616 B] Get: 212 http://deb.debian.org/debian forky/main arm64 libboost-timer1.83.0 arm64 1.83.0-5 [235 kB] Get: 213 http://deb.debian.org/debian forky/main arm64 libboost-timer1.83-dev arm64 1.83.0-5 [237 kB] Get: 214 http://deb.debian.org/debian forky/main arm64 libboost-timer-dev arm64 1.83.0.2+b2 [3712 B] Get: 215 http://deb.debian.org/debian forky/main arm64 libboost1.83-tools-dev arm64 1.83.0-5 [1408 kB] Get: 216 http://deb.debian.org/debian forky/main arm64 libboost-tools-dev arm64 1.83.0.2+b2 [3764 B] Get: 217 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure1.83.0 arm64 1.83.0-5 [245 kB] Get: 218 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure1.83-dev arm64 1.83.0-5 [250 kB] Get: 219 http://deb.debian.org/debian forky/main arm64 libboost-type-erasure-dev arm64 1.83.0.2+b2 [3676 B] Get: 220 http://deb.debian.org/debian forky/main arm64 libboost-url1.83.0 arm64 1.83.0-5 [328 kB] Get: 221 http://deb.debian.org/debian forky/main arm64 libboost-url1.83-dev arm64 1.83.0-5 [423 kB] Get: 222 http://deb.debian.org/debian forky/main arm64 libboost-url-dev arm64 1.83.0.2+b2 [3720 B] Get: 223 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83.0 arm64 1.83.0-5 [416 kB] Get: 224 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83-dev arm64 1.83.0-5 [492 kB] Get: 225 http://deb.debian.org/debian forky/main arm64 libboost-wave-dev arm64 1.83.0.2+b2 [3616 B] Get: 226 http://deb.debian.org/debian forky/main arm64 libboost-all-dev arm64 1.83.0.2+b2 [3924 B] Fetched 159 MB in 2s (97.5 MB/s) Preconfiguring packages ... 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Setting up openmpi-bin (5.0.8-10+b1) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libboost-graph-parallel1.83.0 (1.83.0-5) ... Setting up mpi-default-bin (1.19) ... Setting up libopenmpi-dev:arm64 (5.0.8-10+b1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up libboost-graph-parallel1.83-dev (1.83.0-5) ... Setting up libboost-mpi-python1.83.0 (1.83.0-5) ... Setting up libboost-graph-parallel-dev (1.83.0.2+b2) ... Setting up mpi-default-dev (1.19) ... Setting up libboost-mpi1.83-dev (1.83.0-5) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libboost-mpi-python1.83-dev (1.83.0-5) ... Setting up libboost-mpi-python-dev (1.83.0.2+b2) ... Setting up libboost-all-dev (1.83.0.2+b2) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for forky I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/autodock-vina-1.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../autodock-vina_1.2.7-1_source.changes dpkg-buildpackage: info: source package autodock-vina dpkg-buildpackage: info: source version 1.2.7-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' dh_clean rm -f build/linux/release/*.o build/linux/release/vina* make[1]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7' debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' /usr/bin/make BASE=/usr -C build/linux/release CLFAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" LDFLAGS="-Wl,-z,relro -Wl,-z,now --lto -g" make[2]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' /bin/sh: line 1: git: command not found g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o main.o -c ../../../src/main/main.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.h:27, from ../../../src/lib/vina.h:40, from ../../../src/main/main.cpp:30: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o ad4cache.o -c ../../../src/lib/ad4cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/ad4cache.h:37, from ../../../src/lib/ad4cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o cache.o -c ../../../src/lib/cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/cache.h:37, from ../../../src/lib/cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o non_cache.o -c ../../../src/lib/non_cache.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/szv_grid.h:26, from ../../../src/lib/non_cache.h:27, from ../../../src/lib/non_cache.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o conf_independent.o -c ../../../src/lib/conf_independent.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/conf_independent.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o coords.o -c ../../../src/lib/coords.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/coords.h:26, from ../../../src/lib/coords.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o grid.o -c ../../../src/lib/grid.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o szv_grid.o -c ../../../src/lib/szv_grid.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/szv_grid.h:26, from ../../../src/lib/szv_grid.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o model.o -c ../../../src/lib/model.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/model.cpp:25: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o monte_carlo.o -c ../../../src/lib/monte_carlo.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/monte_carlo.h:27, from ../../../src/lib/monte_carlo.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o mutate.o -c ../../../src/lib/mutate.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/mutate.h:26, from ../../../src/lib/mutate.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o parallel_mc.o -c ../../../src/lib/parallel_mc.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/monte_carlo.h:27, from ../../../src/lib/parallel_mc.h:26, from ../../../src/lib/parallel_mc.cpp:24: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o parse_pdbqt.o -c ../../../src/lib/parse_pdbqt.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.cpp:34: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o quasi_newton.o -c ../../../src/lib/quasi_newton.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/quasi_newton.h:26, from ../../../src/lib/quasi_newton.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o quaternion.o -c ../../../src/lib/quaternion.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/quaternion.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o random.o -c ../../../src/lib/random.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o utils.o -c ../../../src/lib/utils.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -o vina.o -c ../../../src/lib/vina.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, from ../../../src/lib/quaternion.h:26, from ../../../src/lib/conf.h:28, from ../../../src/lib/tree.h:26, from ../../../src/lib/model.h:29, from ../../../src/lib/parse_pdbqt.h:27, from ../../../src/lib/vina.h:40, from ../../../src/lib/vina.cpp:23: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -Wl,-z,relro -Wl,-z,now --lto -g -o vina main.o ad4cache.o cache.o non_cache.o conf_independent.o coords.o grid.o szv_grid.o model.o monte_carlo.o mutate.o parallel_mc.o parse_pdbqt.o quasi_newton.o quaternion.o random.o utils.o vina.o -l boost_system -l boost_thread -l boost_filesystem -l boost_program_options lto-wrapper: warning: using serial compilation of 7 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o split.o -c ../../../src/split/split.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -Wl,-z,relro -Wl,-z,now --lto -g -o vina_split split.o -l boost_system -l boost_thread -l boost_filesystem -l boost_program_options make[2]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' make[1]: Leaving directory '/build/reproducible-path/autodock-vina-1.2.7' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/autodock-vina/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'autodock-vina' in '../autodock-vina_1.2.7-1_arm64.deb'. dpkg-deb: building package 'autodock-vina-dbgsym' in '../autodock-vina-dbgsym_1.2.7-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../autodock-vina_1.2.7-1_arm64.buildinfo dpkg-genchanges --build=binary -O../autodock-vina_1.2.7-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3462567 and its subdirectories I: Current time: Fri Oct 31 10:47:09 +14 2025 I: pbuilder-time-stamp: 1761857229 + false + set +x Thu Oct 30 20:47:09 UTC 2025 I: Signing ./b2/autodock-vina_1.2.7-1_arm64.buildinfo as autodock-vina_1.2.7-1_arm64.buildinfo.asc Thu Oct 30 20:47:09 UTC 2025 I: Signed ./b2/autodock-vina_1.2.7-1_arm64.buildinfo as ./b2/autodock-vina_1.2.7-1_arm64.buildinfo.asc Thu Oct 30 20:47:09 UTC 2025 - build #2 for autodock-vina/forky/arm64 on codethink04-arm64 done. Starting cleanup. All cleanup done. Thu Oct 30 20:47:09 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Nj0rA46b, removing. /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4: total 396 -rw-rw-r-- 1 jenkins jenkins 2279 Mar 2 2025 autodock-vina_1.2.7-1.dsc drwxrwxr-x 2 jenkins jenkins 4096 Oct 30 20:42 b1 drwxrwxr-x 2 jenkins jenkins 4096 Oct 30 20:47 b2 -rw------- 1 jenkins jenkins 389080 Oct 30 20:42 rbuildlog.1QPysdc /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1: total 49216 -rw-r--r-- 1 jenkins jenkins 3131132 Oct 30 20:42 autodock-vina-dbgsym_1.2.7-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 37512 Oct 30 20:42 autodock-vina_1.2.7-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2279 Oct 30 20:42 autodock-vina_1.2.7-1.dsc -rw-r--r-- 1 jenkins jenkins 11968 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 12850 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1740 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 235752 Oct 30 20:42 autodock-vina_1.2.7-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 1874 Oct 30 20:42 autodock-vina_1.2.7-1_source.changes -rw-r--r-- 1 jenkins jenkins 46488149 Oct 30 20:42 autodock-vina_1.2.7.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 385354 Oct 30 20:42 build.log /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2: total 48888 -rw-r--r-- 1 jenkins jenkins 3131132 Oct 30 20:47 autodock-vina-dbgsym_1.2.7-1_arm64.deb -rw-r--r-- 1 jenkins jenkins 37512 Oct 30 20:47 autodock-vina_1.2.7-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2279 Oct 30 20:47 autodock-vina_1.2.7-1.dsc -rw-rw-r-- 1 jenkins jenkins 11968 Oct 30 20:47 autodock-vina_1.2.7-1_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 12850 Oct 30 20:47 autodock-vina_1.2.7-1_arm64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 1740 Oct 30 20:47 autodock-vina_1.2.7-1_arm64.changes -rw-r--r-- 1 jenkins jenkins 235752 Oct 30 20:47 autodock-vina_1.2.7-1_arm64.deb -rw-rw-r-- 1 jenkins jenkins 1874 Oct 30 20:47 autodock-vina_1.2.7-1_source.changes -rw-r--r-- 1 jenkins jenkins 46488149 Oct 30 20:47 autodock-vina_1.2.7.orig.tar.gz -rw-rw-r-- 1 jenkins jenkins 115892 Oct 30 20:47 build.log Thu Oct 30 20:47:11 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Thu Oct 30 20:47:12 UTC 2025 I: autodock-vina_1.2.7-1_arm64.changes: Format: 1.8 Date: Sun, 02 Mar 2025 12:10:29 +0100 Source: autodock-vina Binary: autodock-vina autodock-vina-dbgsym Architecture: arm64 Version: 1.2.7-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: autodock-vina - docking of small molecules to proteins Changes: autodock-vina (1.2.7-1) unstable; urgency=medium . * New upstream version 1.2.7 * boost1.83.patch: delete patch: applied upstream. * remove_static.patch: refresh patch. * d/control: declare compliance to standards version 4.7.2. * d/control: add myself to uploaders. * d/patches/*: normalize dep3 headers. * d/rules: activate all hardening options. * fortify.patch: new: propagate fortify source macro. Checksums-Sha1: b2d0297248986a61e592b8e08b02f236a12d5774 3131132 autodock-vina-dbgsym_1.2.7-1_arm64.deb 14bda494d6fca79fba28524bbaf96938360399b3 11968 autodock-vina_1.2.7-1_arm64.buildinfo 91913a2c278ee7aa8f909e17384b220a0d50b3ba 235752 autodock-vina_1.2.7-1_arm64.deb Checksums-Sha256: c6e07765973721975aa7d881ade2224437c5c8788105ffdf2086a9e0088561a2 3131132 autodock-vina-dbgsym_1.2.7-1_arm64.deb 52481b5ccbea26fb828bd3ca22ceb3cd4ebade6eaf15c45a52e3209a5c71e1a5 11968 autodock-vina_1.2.7-1_arm64.buildinfo e606721722751a137c4492acb8bcf89b42cbfdf5201dcbf87b01f3f800fc8409 235752 autodock-vina_1.2.7-1_arm64.deb Files: b6470ab042108aaebce9c94cd1c7fa81 3131132 debug optional autodock-vina-dbgsym_1.2.7-1_arm64.deb d5383f8b76647cbcaef9106d660c9499 11968 science optional autodock-vina_1.2.7-1_arm64.buildinfo 08d16aa2eb4a46f21fac65583c564007 235752 science optional autodock-vina_1.2.7-1_arm64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/arm64/autodock-vina_1.2.7-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/arm64/autodock-vina_1.2.7-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/arm64/autodock-vina_1.2.7-1.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/forky/arm64/autodock-vina_1.2.7-1.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/forky/arm64/autodock-vina_1.2.7-1_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/autodock-vina_1.2.7-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-10-30 20:42:46.481067902 +0000 +++ b2/build.log 2025-10-30 20:47:11.837402853 +0000 @@ -1,2545 +1,8 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Oct 30 08:40:51 -12 2025 -I: pbuilder-time-stamp: 1761856851 +I: Current time: Fri Oct 31 10:42:48 +14 2025 +I: pbuilder-time-stamp: 1761856968 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] -tar: ./build: time stamp 2026-11-30 05:47:35 is 34204002.86979051 s in the future -tar: ./dev/null: time stamp 2026-11-30 05:47:21 is 34203988.86963215 s in the future -tar: ./dev/zero: time stamp 2026-11-30 05:47:21 is 34203988.86959699 s in the future -tar: ./dev/full: time stamp 2026-11-30 05:47:21 is 34203988.86956579 s in the future -tar: ./dev/random: time stamp 2026-11-30 05:47:21 is 34203988.86954415 s in the future -tar: ./dev/urandom: time stamp 2026-11-30 05:47:21 is 34203988.86953323 s in the future -tar: ./dev/tty: time stamp 2026-11-30 05:47:21 is 34203988.86952487 s in the future -tar: ./dev/console: time stamp 2026-11-30 05:47:21 is 34203988.86951611 s in the future -tar: ./dev/pts: time stamp 2026-11-30 05:47:21 is 34203988.86950619 s in the future -tar: ./dev/ptmx: time stamp 2026-11-30 05:47:21 is 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the future -tar: ./usr/include/powerpc-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57319863 s in the future -tar: ./usr/include/mipsisa64r6el-linux-gnuabi64/asm: time stamp 2026-11-30 05:47:34 is 34203996.57314767 s in the future -tar: ./usr/include/mipsisa64r6el-linux-gnuabi64: time stamp 2026-11-30 05:47:34 is 34203996.57311195 s in the future -tar: ./usr/include/mipsel-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57304599 s in the future -tar: ./usr/include/mipsel-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57299027 s in the future -tar: ./usr/include/mips64el-linux-gnuabi64/asm: time stamp 2026-11-30 05:47:34 is 34203996.57294475 s in the future -tar: ./usr/include/mips64el-linux-gnuabi64: time stamp 2026-11-30 05:47:34 is 34203996.57289867 s in the future -tar: ./usr/include/mips64-linux-gnuabi64/asm: time stamp 2026-11-30 05:47:34 is 34203996.57285399 s in the future -tar: ./usr/include/mips64-linux-gnuabi64: time stamp 2026-11-30 05:47:34 is 34203996.57280747 s in the future -tar: ./usr/include/mips-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57276987 s in the future -tar: ./usr/include/mips-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57270691 s in the future -tar: ./usr/include/m68k-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57265527 s in the future -tar: ./usr/include/m68k-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57261195 s in the future -tar: ./usr/include/loongarch64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57256623 s in the future -tar: ./usr/include/loongarch64-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57252083 s in the future -tar: ./usr/include/i386-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57245739 s in the future -tar: ./usr/include/i386-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57242159 s in the future -tar: ./usr/include/hppa-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57238811 s in the future -tar: ./usr/include/hppa-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57235651 s in the future -tar: ./usr/include/arm-linux-gnueabihf/asm: time stamp 2026-11-30 05:47:34 is 34203996.57233223 s in the future -tar: ./usr/include/arm-linux-gnueabihf: time stamp 2026-11-30 05:47:34 is 34203996.57232443 s in the future -tar: ./usr/include/arm-linux-gnueabi/asm: time stamp 2026-11-30 05:47:34 is 34203996.57231671 s in the future -tar: ./usr/include/arm-linux-gnueabi: time stamp 2026-11-30 05:47:34 is 34203996.57231035 s in the future -tar: ./usr/include/alpha-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57230255 s in the future -tar: ./usr/include/alpha-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57229591 s in the future -tar: ./usr/include/aarch64-linux-gnu/asm: time stamp 2026-11-30 05:47:34 is 34203996.57228831 s in the future -tar: ./usr/include/aarch64-linux-gnu: time stamp 2026-11-30 05:47:34 is 34203996.57228227 s in the future -tar: ./usr/include: time stamp 2026-11-30 05:47:35 is 34203997.57227591 s in the future -tar: ./usr/bin: time stamp 2026-12-01 22:29:40 is 34350522.57226967 s in the future -tar: ./usr: time stamp 2026-11-30 05:47:21 is 34203983.57226383 s in the future -tar: ./etc/systemd/system/timers.target.wants: time stamp 2026-11-30 05:47:35 is 34203997.57225099 s in the future -tar: ./etc/systemd/system: time stamp 2026-11-30 05:47:21 is 34203983.57224491 s in the future -tar: ./etc/alternatives: time stamp 2026-11-30 05:47:40 is 34204002.57223467 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem @@ -2564,53 +27,85 @@ dpkg-source: info: applying fortify.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 30 20:42 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='forky' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=forky + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='38e4c214e07d49bfb477bef998b47bb4' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='15575' - PS1='# ' - PS2='> ' + INVOCATION_ID=d500ea3b05364bb4a9f105ada1b060cf + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3462567 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_EJ5N --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1 --logfile b1/build.log autodock-vina_1.2.7-1.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/pbuilderrc_7ejZ --distribution forky --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2 --logfile b2/build.log autodock-vina_1.2.7-1.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/15575/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -2876,7 +371,7 @@ Get: 224 http://deb.debian.org/debian forky/main arm64 libboost-wave1.83-dev arm64 1.83.0-5 [492 kB] Get: 225 http://deb.debian.org/debian forky/main arm64 libboost-wave-dev arm64 1.83.0.2+b2 [3616 B] Get: 226 http://deb.debian.org/debian forky/main arm64 libboost-all-dev arm64 1.83.0.2+b2 [3924 B] -Fetched 159 MB in 1s (180 MB/s) +Fetched 159 MB in 2s (97.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19971 files and directories currently installed.) @@ -3609,8 +1104,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Oct 30 20:41:26 UTC 2025. -Universal Time is now: Thu Oct 30 20:41:26 UTC 2025. +Local time is now: Thu Oct 30 20:43:54 UTC 2025. +Universal Time is now: Thu Oct 30 20:43:54 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:arm64 (1.83.0-5) ... @@ -3811,7 +1306,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/autodock-vina-1.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../autodock-vina_1.2.7-1_source.changes +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for forky +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/autodock-vina-1.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../autodock-vina_1.2.7-1_source.changes dpkg-buildpackage: info: source package autodock-vina dpkg-buildpackage: info: source version 1.2.7-1 dpkg-buildpackage: info: source distribution unstable @@ -3833,7 +1332,7 @@ make[1]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7' /usr/bin/make BASE=/usr -C build/linux/release CLFAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto" LDFLAGS="-Wl,-z,relro -Wl,-z,now --lto -g" make[2]: Entering directory '/build/reproducible-path/autodock-vina-1.2.7/build/linux/release' -/bin/sh: 1: git: not found +/bin/sh: line 1: git: command not found g++ -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -ansi -Wno-long-long -O3 -DNDEBUG -std=c++11 -DVERSION=\"v1.2.7\" -I /usr/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/autodock-vina-1.2.7=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fpermissive -DBOOST_FILESYSTEM_VERSION=3 --lto -I ../../../src/lib -o main.o -c ../../../src/main/main.cpp cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/include/boost/math/quaternion.hpp:14, @@ -4048,8 +1547,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'autodock-vina-dbgsym' in '../autodock-vina-dbgsym_1.2.7-1_arm64.deb'. dpkg-deb: building package 'autodock-vina' in '../autodock-vina_1.2.7-1_arm64.deb'. +dpkg-deb: building package 'autodock-vina-dbgsym' in '../autodock-vina-dbgsym_1.2.7-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../autodock-vina_1.2.7-1_arm64.buildinfo dpkg-genchanges --build=binary -O../autodock-vina_1.2.7-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -4057,12 +1556,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3462567/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/15575 and its subdirectories -I: Current time: Thu Oct 30 08:42:43 -12 2025 -I: pbuilder-time-stamp: 1761856963 +I: removing directory /srv/workspace/pbuilder/3462567 and its subdirectories +I: Current time: Fri Oct 31 10:47:09 +14 2025 +I: pbuilder-time-stamp: 1761857229 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/autodock-vina_1.2.7-1.diff: 89.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/forky/arm64/autodock-vina_1.2.7-1.diff.gz b2/build.log: 86.3% -- replaced with stdout Compressing the 1st log... b1/build.log: 89.1% -- replaced with stdout Thu Oct 30 20:47:13 UTC 2025 I: diffoscope 306 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_autodock-vina_forky_arm64_1761857233 + touch /var/log/reproducible-builds/diffoscope_stamp_autodock-vina_forky_arm64_1761857233 + RESULT=0 + systemd-run '--description=diffoscope on autodock-vina/1.2.7-1 in forky/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_6-124912 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4 --run-session -c jenkins-reproducible-forky-diffoscope-d6f91d5d-ea56-481b-b6d8-3e05a514e328 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/dbd-tmp-c7xa6U3 ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/autodock-vina_1.2.7-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/autodock-vina_1.2.7-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/autodock-vina_1.2.7-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1/autodock-vina_1.2.7-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2/autodock-vina_1.2.7-1_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_6-124912.service; invocation ID: 9c77c3fa004447c3a942415045d217f8 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/autodock-vina_1.2.7-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/autodock-vina_1.2.7-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/autodock-vina_1.2.7-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b1/autodock-vina_1.2.7-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.WXztbXL4/b2/autodock-vina_1.2.7-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 221ms CPU time consumed: 183ms Memory peak: 17M (swap: 0B) _ _ _ _ __ _ _ _| |_ ___ __| | ___ ___| | __ __ _(_)_ __ __ _ / _` | | | | __/ _ \ / _` |/ _ \ / __| |/ /___\ \ / / | '_ \ / _` | | (_| | |_| | || (_) | (_| | (_) | (__| <_____\ V /| | | | | (_| | \__,_|\__,_|\__\___/ \__,_|\___/ \___|_|\_\ \_/ |_|_| |_|\__,_| Thu Oct 30 20:47:13 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Thu Oct 30 20:47:13 UTC 2025 I: autodock-vina from forky built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-10-30 20:47:14] INFO: Starting at 2025-10-30 20:47:14.181237 [2025-10-30 20:47:14] INFO: Generating the pages of 1 package(s) [2025-10-30 20:47:14] CRITICAL: https://tests.reproducible-builds.org/debian/forky/arm64/autodock-vina didn't produce a buildlog, even though it has been built. [2025-10-30 20:47:14] INFO: Finished at 2025-10-30 20:47:14.503332, took: 0:00:00.322099 Thu Oct 30 20:47:14 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/forky/arm64/autodock-vina.html Thu Oct 30 20:47:14 UTC 2025 I: Removing signed autodock-vina_1.2.7-1_arm64.buildinfo.asc files: removed './b1/autodock-vina_1.2.7-1_arm64.buildinfo.asc' removed './b2/autodock-vina_1.2.7-1_arm64.buildinfo.asc' 1761857234 arm64 forky autodock-vina Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/arm64/autodock-vina_1.2.7-1.rbuild.log: 88.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/forky/arm64/autodock-vina_1.2.7-1.rbuild.log.gz [2025-10-30 20:47:14] INFO: Starting at 2025-10-30 20:47:14.846757 [2025-10-30 20:47:14] INFO: Generating the pages of 1 package(s) [2025-10-30 20:47:15] INFO: Finished at 2025-10-30 20:47:15.114477, took: 0:00:00.267724 All cleanup done. Thu Oct 30 20:47:15 UTC 2025 - total duration: 0h 6m 37s. Thu Oct 30 20:47:15 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-6orjAu3r, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 6min 39.048s CPU time consumed: 4.558s Memory peak: 139.5M (swap: 0B)