Running as unit: rb-build-arm64_9-105473.service; invocation ID: c33c8e0c72224836838786589ccc80f1 ==================================================================================== Fri Oct 31 08:53:19 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_9) on jenkins, called using "codethink04-arm64 codethink03-arm64" as arguments. Fri Oct 31 08:53:19 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-M1Eg6iNL" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Oct 31 08:53:19 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Fri Oct 31 08:53:19 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-p2TGqk' Fri Oct 31 08:53:19 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Oct 31 08:53:19 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-v2cOVz' ok, let's check if golang-github-brentp-irelate is building anywhere yet… ok, golang-github-brentp-irelate is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of golang-github-brentp-irelate in unstable on arm64 on jenkins now. 1st build will be done on codethink04-arm64.debian.net. 2nd build will be done on codethink03-arm64.debian.net. ============================================================================= Fri Oct 31 08:53:22 UTC 2025 I: starting to build golang-github-brentp-irelate/unstable/arm64 on jenkins on '2025-10-31 08:53' Fri Oct 31 08:53:22 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_9/105473/console.log 1761900802 arm64 unstable golang-github-brentp-irelate Fri Oct 31 08:53:22 UTC 2025 I: Downloading source for unstable/golang-github-brentp-irelate=0.0.1+ds-2 --2025-10-31 08:53:23-- http://deb.debian.org/debian/pool/main/g/golang-github-brentp-irelate/golang-github-brentp-irelate_0.0.1%2bds-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2072 (2.0K) [text/prs.lines.tag] Saving to: ‘golang-github-brentp-irelate_0.0.1+ds-2.dsc’ 0K .. 100% 216M=0s 2025-10-31 08:53:23 (216 MB/s) - ‘golang-github-brentp-irelate_0.0.1+ds-2.dsc’ saved [2072/2072] --2025-10-31 08:53:23-- http://deb.debian.org/debian/pool/main/g/golang-github-brentp-irelate/golang-github-brentp-irelate_0.0.1%2bds-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2072 (2.0K) [text/prs.lines.tag] Saving to: ‘golang-github-brentp-irelate_0.0.1+ds-2.dsc’ 0K .. 100% 216M=0s 2025-10-31 08:53:23 (216 MB/s) - ‘golang-github-brentp-irelate_0.0.1+ds-2.dsc’ saved [2072/2072] Fri Oct 31 08:53:23 UTC 2025 I: golang-github-brentp-irelate_0.0.1+ds-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: golang-github-brentp-irelate Binary: golang-github-brentp-irelate-dev Architecture: all Version: 0.0.1+ds-2 Maintainer: Debian Go Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/brentp/irelate Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate Vcs-Git: https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git Testsuite: autopkgtest-pkg-go Build-Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-biogo-hts-dev, golang-gopkg-check.v1-dev, golang-github-pkg-errors-dev, golang-github-brentp-vcfgo-dev, golang-github-brentp-bix-dev, samtools Package-List: golang-github-brentp-irelate-dev deb devel optional arch=all Checksums-Sha1: 96bb09d65418c0c3f864a7ff68be660eed144e6b 82668 golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz 41fd0034b1a9a2c8ee5238c30fbe087f2d9723ca 1649188 golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz Checksums-Sha256: 65abbd72181dae01fb9648b897e781b3f6084b52aea0ced19d5a3c75bd7e2bd3 82668 golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz 7c884a15c8dc4f14d671383e44ea2ca50716e509466800b1e61214802733b832 1649188 golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz Files: 20c83dc1add91cdd2ab3993432bc1f89 82668 golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz 1e73d483ac2ae8fc82ff75e91a9bd9ce 1649188 golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz Go-Import-Path: github.com/brentp/irelate -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmkB28MACgkQQc5/C58b izJ0ywf+IlhelSb0iUakVe/Mk+rt0l+NDIjaw3Ycnm/KKPT/McFJbE2z71u/dVcu LKseIDqFMZgyhuPeLS3wXD5bIInDF5acll4ViciEvHPaZkVFzeF1LqYDi4RcELnj jjWw6MT7OmKSj2D22O/QeqeQCWEvn6MgsYvDyVjzPe6SdPHVmmus+zIxXxeCHrg2 E5g54sprL80dbKHENPR18VepMT73hqN233OlEYwthZyzMOUToR72qvXBaX1QOh/7 DEnI3NRkJAv3hdIw3pvBkgYw04KudyQlnzWSAJ16+n0VOGWBUz6IhGOmPxnKPoKp UoPvf3xcQezQgm7XCAFK7jTKNV+oJA== =3Q+N -----END PGP SIGNATURE----- Fri Oct 31 08:53:23 UTC 2025 I: Checking whether the package is not for us Fri Oct 31 08:53:23 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Fri Oct 31 08:53:23 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Fri Oct 31 08:53:23 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink04-arm64.debian.net is marked as down. Fri Oct 31 08:53:23 UTC 2025 - checking via ssh if codethink04-arm64.debian.net is up. removed '/tmp/read-only-fs-test-UaU0iS' ==================================================================================== Fri Oct 31 08:53:24 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink04-arm64, called using "1 golang-github-brentp-irelate unstable /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ 0.0.1+ds-2" as arguments. Fri Oct 31 08:53:24 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-gVu7yb5n" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Oct 31 08:53:24 UTC 2025 I: Downloading source for unstable/golang-github-brentp-irelate=0.0.1+ds-2 Reading package lists... NOTICE: 'golang-github-brentp-irelate' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git Please use: git clone https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1734 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (dsc) [2072 B] Get:2 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (tar) [82.7 kB] Get:3 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (diff) [1649 kB] Fetched 1734 kB in 0s (37.6 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'golang-github-brentp-irelate' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git Please use: git clone https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1734 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (dsc) [2072 B] Get:2 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (tar) [82.7 kB] Get:3 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (diff) [1649 kB] Fetched 1734 kB in 0s (37.6 MB/s) Download complete and in download only mode ============================================================================= Building golang-github-brentp-irelate in unstable on arm64 on codethink04-arm64 now. Date: Fri Oct 31 08:53:24 GMT 2025 Date UTC: Fri Oct 31 08:53:24 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 30 20:53:25 -12 2025 I: pbuilder-time-stamp: 1761900805 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [golang-github-brentp-irelate_0.0.1+ds-2.dsc] I: copying [./golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz] I: copying [./golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./golang-github-brentp-irelate_0.0.1+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting golang-github-brentp-irelate in golang-github-brentp-irelate-0.0.1+ds dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1251201/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='4d0736f1de474875b52113ff4a217282' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1251201' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_Kz09 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1 --logfile b1/build.log golang-github-brentp-irelate_0.0.1+ds-2.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1251201/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-biogo-hts-dev, golang-gopkg-check.v1-dev, golang-github-pkg-errors-dev, golang-github-brentp-vcfgo-dev, golang-github-brentp-bix-dev, samtools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-golang; however: Package dh-golang is not installed. pbuilder-satisfydepends-dummy depends on golang-any; however: Package golang-any is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-hts-dev; however: Package golang-github-biogo-hts-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-gopkg-check.v1-dev; however: Package golang-gopkg-check.v1-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-pkg-errors-dev; however: Package golang-github-pkg-errors-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-brentp-vcfgo-dev; however: Package golang-github-brentp-vcfgo-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-brentp-bix-dev; however: Package golang-github-brentp-bix-dev is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} binutils-gold{a} binutils-gold-aarch64-linux-gnu{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-golang{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} golang-1.24-go{a} golang-1.24-src{a} golang-any{a} golang-github-biogo-hts-dev{a} golang-github-brentp-bix-dev{a} golang-github-brentp-vcfgo-dev{a} golang-github-creack-pty-dev{a} golang-github-kr-pretty-dev{a} golang-github-kr-text-dev{a} golang-github-pkg-errors-dev{a} golang-github-rogpeppe-go-internal-dev{a} golang-github-ulikunitz-xz-dev{a} golang-github-yuin-goldmark-dev{a} golang-go{a} golang-golang-x-crypto-dev{a} golang-golang-x-mod-dev{a} golang-golang-x-net-dev{a} golang-golang-x-sync-dev{a} golang-golang-x-sys-dev{a} golang-golang-x-term-dev{a} golang-golang-x-text-dev{a} golang-golang-x-tools-dev{a} golang-gopkg-check.v1-dev{a} golang-src{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} samtools{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pkgconf publicsuffix wget 0 packages upgraded, 84 newly installed, 0 to remove and 0 not upgraded. Need to get 77.2 MB of archives. After unpacking 415 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 binutils-gold-aarch64-linux-gnu arm64 2.44-3 [1700 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 binutils-gold arm64 2.44-3 [202 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-7 [540 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 24 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-1 [184 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.1+dfsg-0.3 [591 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 dh-golang all 1.63 [24.4 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 golang-1.24-src all 1.24.9-1 [21.2 MB] Get: 34 http://deb.debian.org/debian unstable/main arm64 golang-1.24-go arm64 1.24.9-1 [24.7 MB] Get: 35 http://deb.debian.org/debian unstable/main arm64 golang-src all 2:1.24~2 [5136 B] Get: 36 http://deb.debian.org/debian unstable/main arm64 golang-go arm64 2:1.24~2 [44.3 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 golang-any arm64 2:1.24~2 [5216 B] Get: 38 http://deb.debian.org/debian unstable/main arm64 golang-github-ulikunitz-xz-dev all 0.5.15-1 [3080 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 golang-github-biogo-hts-dev all 1.4.5+dfsg1-2 [319 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 golang-github-pkg-errors-dev all 0.9.1-3 [12.9 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 golang-github-creack-pty-dev all 1.1.21-1 [13.0 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 golang-github-kr-text-dev all 0.2.0-2 [10.2 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-mod-dev all 0.19.0-1 [104 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-sys-dev all 0.36.0-1 [640 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 golang-github-yuin-goldmark-dev all 1.7.13-1 [113 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-term-dev all 0.35.0-1 [16.1 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-text-dev all 0.29.0-2 [3992 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-crypto-dev all 1:0.43.0-2 [1950 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-net-dev all 1:0.27.0-2 [904 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-sync-dev all 0.7.0-1 [19.0 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-tools-dev all 1:0.25.0+ds-1 [1608 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 golang-github-rogpeppe-go-internal-dev all 1.14.1-1 [103 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 golang-github-kr-pretty-dev all 0.3.1-1 [11.9 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 golang-gopkg-check.v1-dev all 0.0+git20200902.038fdea-2 [31.2 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 golang-github-brentp-bix-dev all 0.0~git20250701.000f089+ds-1 [8668 B] Get: 56 http://deb.debian.org/debian unstable/main arm64 golang-github-brentp-vcfgo-dev all 0.0~git20250902.a31336c-1 [43.4 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.12.0-1 [63.6 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.16.0-1 [123 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.9-2 [420 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.10-3 [1384 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 69 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.16.0-1 [23.8 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.17.0~rc3-1 [362 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 libhtscodecs2 arm64 1.6.1-2 [74.7 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 libhts3t64 arm64 1.22.1+ds2-1 [434 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5+20250216-2 [96.1 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 samtools arm64 1.22.1-1 [666 kB] Fetched 77.2 MB in 1s (110 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. 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Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_arm64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package binutils-gold-aarch64-linux-gnu. 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Selecting previously unselected package golang-github-brentp-bix-dev. Preparing to unpack .../54-golang-github-brentp-bix-dev_0.0~git20250701.000f089+ds-1_all.deb ... Unpacking golang-github-brentp-bix-dev (0.0~git20250701.000f089+ds-1) ... Selecting previously unselected package golang-github-brentp-vcfgo-dev. Preparing to unpack .../55-golang-github-brentp-vcfgo-dev_0.0~git20250902.a31336c-1_all.deb ... Unpacking golang-github-brentp-vcfgo-dev (0.0~git20250902.a31336c-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../56-libbrotli1_1.1.0-2+b7_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b7) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../57-libcom-err2_1.47.2-3+b3_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.2-3+b3) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../58-libnghttp3-9_1.12.0-1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.12.0-1) ... Selecting previously unselected package libngtcp2-16:arm64. Preparing to unpack .../59-libngtcp2-16_1.16.0-1_arm64.deb ... Unpacking libngtcp2-16:arm64 (1.16.0-1) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../60-libidn2-0_2.3.8-4_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.8-4) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../61-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../62-libp11-kit0_0.25.9-2_arm64.deb ... Unpacking libp11-kit0:arm64 (0.25.9-2) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../63-libtasn1-6_4.20.0-2_arm64.deb ... Unpacking libtasn1-6:arm64 (4.20.0-2) ... Selecting previously unselected package libgnutls30t64:arm64. Preparing to unpack .../64-libgnutls30t64_3.8.10-3_arm64.deb ... Unpacking libgnutls30t64:arm64 (3.8.10-3) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../65-libkrb5support0_1.21.3-5_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-5) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../66-libk5crypto3_1.21.3-5_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-5) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../67-libkeyutils1_1.6.3-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-6) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../68-libkrb5-3_1.21.3-5_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-5) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../69-libgssapi-krb5-2_1.21.3-5_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-5) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../70-libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../71-libsasl2-2_2.1.28+dfsg1-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-10) ... Selecting previously unselected package libldap2:arm64. Preparing to unpack .../72-libldap2_2.6.10+dfsg-1_arm64.deb ... Unpacking libldap2:arm64 (2.6.10+dfsg-1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../73-libnghttp2-14_1.64.0-1.1+b1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:arm64. Preparing to unpack .../74-libngtcp2-crypto-gnutls8_1.16.0-1_arm64.deb ... Unpacking libngtcp2-crypto-gnutls8:arm64 (1.16.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../75-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../76-librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../77-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl3t64-gnutls:arm64. Preparing to unpack .../78-libcurl3t64-gnutls_8.17.0~rc3-1_arm64.deb ... Unpacking libcurl3t64-gnutls:arm64 (8.17.0~rc3-1) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../79-libdeflate0_1.23-2_arm64.deb ... Unpacking libdeflate0:arm64 (1.23-2) ... Selecting previously unselected package libhtscodecs2:arm64. Preparing to unpack .../80-libhtscodecs2_1.6.1-2_arm64.deb ... Unpacking libhtscodecs2:arm64 (1.6.1-2) ... Selecting previously unselected package libhts3t64:arm64. Preparing to unpack .../81-libhts3t64_1.22.1+ds2-1_arm64.deb ... Unpacking libhts3t64:arm64 (1.22.1+ds2-1) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../82-libncurses6_6.5+20250216-2_arm64.deb ... Unpacking libncurses6:arm64 (6.5+20250216-2) ... Selecting previously unselected package samtools. Preparing to unpack .../83-samtools_1.22.1-1_arm64.deb ... Unpacking samtools (1.22.1-1) ... Setting up libhtscodecs2:arm64 (1.6.1-2) ... Setting up golang-1.24-src (1.24.9-1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libkeyutils1:arm64 (1.6.3-6) ... Setting up bsdextrautils (2.41.2-4) ... Setting up golang-github-creack-pty-dev (1.1.21-1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up golang-github-pkg-errors-dev (0.9.1-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:arm64 (2.15.1+dfsg-0.3) ... Setting up libdebhelper-perl (13.28) ... Setting up libbrotli1:arm64 (1.1.0-2+b7) ... Setting up golang-golang-x-sys-dev (0.36.0-1) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Setting up libdeflate0:arm64 (1.23-2) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up binutils-gold-aarch64-linux-gnu (2.44-3) ... Setting up golang-golang-x-term-dev (0.35.0-1) ... Setting up libcom-err2:arm64 (1.47.2-3+b3) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.194-1) ... Setting up libkrb5support0:arm64 (1.21.3-5) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-10) ... Setting up autotools-dev (20240727.1) ... Setting up golang-github-kr-text-dev (0.2.0-2) ... Setting up golang-github-yuin-goldmark-dev (1.7.13-1) ... Setting up libncurses6:arm64 (6.5+20250216-2) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up golang-golang-x-sync-dev (0.7.0-1) ... Setting up golang-golang-x-mod-dev (0.19.0-1) ... Setting up autopoint (0.23.1-2) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-10) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:arm64 (1.12.0-1) ... Setting up libffi8:arm64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up golang-golang-x-text-dev (0.29.0-2) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up libngtcp2-16:arm64 (1.16.0-1) ... Setting up golang-golang-x-crypto-dev (1:0.43.0-2) ... Setting up libkrb5-3:arm64 (1.21.3-5) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up golang-src (2:1.24~2) ... Setting up libldap2:arm64 (2.6.10+dfsg-1) ... Setting up golang-github-ulikunitz-xz-dev (0.5.15-1) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-7) ... Setting up binutils-gold (2.44-3) ... Setting up libidn2-0:arm64 (2.3.8-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libp11-kit0:arm64 (0.25.9-2) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up golang-github-biogo-hts-dev (1.4.5+dfsg1-2) ... Setting up golang-1.24-go (1.24.9-1) ... Setting up golang-golang-x-net-dev (1:0.27.0-2) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libgnutls30t64:arm64 (3.8.10-3) ... Setting up golang-go:arm64 (2:1.24~2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up golang-golang-x-tools-dev (1:0.25.0+ds-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up golang-any:arm64 (2:1.24~2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Setting up golang-github-rogpeppe-go-internal-dev (1.14.1-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.16.0-1) ... Setting up golang-github-kr-pretty-dev (0.3.1-1) ... Setting up libcurl3t64-gnutls:arm64 (8.17.0~rc3-1) ... Setting up debhelper (13.28) ... Setting up golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-2) ... Setting up libhts3t64:arm64 (1.22.1+ds2-1) ... Setting up golang-github-brentp-bix-dev (0.0~git20250701.000f089+ds-1) ... Setting up dh-golang (1.63) ... Setting up golang-github-brentp-vcfgo-dev (0.0~git20250902.a31336c-1) ... Setting up samtools (1.22.1-1) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-brentp-irelate_0.0.1+ds-2_source.changes dpkg-buildpackage: info: source package golang-github-brentp-irelate dpkg-buildpackage: info: source version 0.0.1+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary dh binary --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' # The DH_GOLANG_INSTALL_EXTRA is configured during dh_auto_configure, hence generating the needed generated files at this step echo 'Generating corresponding files ...' Generating corresponding files ... cat debian/missing-sources/ex.sam| samtools view -Sb - > data/ex.bam samtools index data/ex.bam data/ex.bam.bai dh_auto_configure make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers internal/unsafeheader internal/byteorder internal/profilerecord internal/goos internal/coverage/rtcov internal/goarch internal/goexperiment internal/godebugs internal/asan internal/msan math/bits cmp internal/itoa internal/cpu internal/abi internal/runtime/syscall sync/atomic internal/runtime/math unicode/utf8 unicode log/internal internal/chacha8rand math internal/bytealg internal/runtime/atomic internal/runtime/sys internal/runtime/exithook internal/stringslite internal/race internal/runtime/maps internal/sync runtime iter internal/reflectlite sync weak maps slices sort errors strconv internal/oserror path io internal/bisect internal/testlog unique syscall internal/godebug container/heap strings hash bytes hash/crc32 github.com/brentp/irelate/interfaces net/netip regexp/syntax reflect bufio time internal/syscall/unix internal/syscall/execenv regexp io/fs context internal/poll internal/filepathlite os encoding/binary internal/fmtsort os/signal fmt encoding/hex net/url encoding/csv log compress/flate github.com/pkg/errors text/tabwriter github.com/brentp/vcfgo compress/gzip github.com/biogo/hts/bgzf runtime/pprof github.com/biogo/hts/bgzf/index github.com/biogo/hts/csi github.com/biogo/hts/internal github.com/biogo/hts/tabix github.com/biogo/hts/sam github.com/biogo/hts/bam github.com/brentp/irelate/parsers github.com/brentp/bix github.com/brentp/irelate github.com/brentp/irelate/main dh_auto_test -O--builddirectory=_build -O--buildsystem=golang cd _build && go test -vet=off -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers === RUN TestInterval --- PASS: TestInterval (0.00s) === RUN TestIntervalSource --- PASS: TestIntervalSource (0.00s) === RUN TestIntervalLine --- PASS: TestIntervalLine (0.00s) PASS ok github.com/brentp/irelate 0.016s ? github.com/brentp/irelate/interfaces [no test files] ? github.com/brentp/irelate/main [no test files] === RUN Test OK: 1 passed --- PASS: Test (0.02s) PASS ok github.com/brentp/irelate/parsers 0.040s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_install -- --no-binaries make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_installdocs -O--builddirectory=_build -O--buildsystem=golang dh_installchangelogs -O--builddirectory=_build -O--buildsystem=golang dh_installsystemduser -O--builddirectory=_build -O--buildsystem=golang dh_perl -O--builddirectory=_build -O--buildsystem=golang dh_link -O--builddirectory=_build -O--buildsystem=golang dh_strip_nondeterminism -O--builddirectory=_build -O--buildsystem=golang dh_compress -O--builddirectory=_build -O--buildsystem=golang dh_fixperms -O--builddirectory=_build -O--buildsystem=golang dh_missing -O--builddirectory=_build -O--buildsystem=golang dh_installdeb -O--builddirectory=_build -O--buildsystem=golang dh_golang -O--builddirectory=_build -O--buildsystem=golang dh_gencontrol -O--builddirectory=_build -O--buildsystem=golang dh_md5sums -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -O--builddirectory=_build -O--buildsystem=golang dpkg-deb: building package 'golang-github-brentp-irelate-dev' in '../golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo dpkg-genchanges --build=binary -O../golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1251201 and its subdirectories I: Current time: Thu Oct 30 20:56:16 -12 2025 I: pbuilder-time-stamp: 1761900976 Fri Oct 31 08:56:16 UTC 2025 I: Signing ./b1/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo as golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc Fri Oct 31 08:56:16 UTC 2025 I: Signed ./b1/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo as ./b1/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc Fri Oct 31 08:56:16 UTC 2025 - build #1 for golang-github-brentp-irelate/unstable/arm64 on codethink04-arm64 done. Starting cleanup. All cleanup done. Fri Oct 31 08:56:16 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-gVu7yb5n, removing. /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ: total 16 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:56 b1 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:53 b2 -rw-rw-r-- 1 jenkins jenkins 2072 Oct 29 09:39 golang-github-brentp-irelate_0.0.1+ds-2.dsc -rw------- 1 jenkins jenkins 3346 Oct 31 08:53 rbuildlog.t1xTp0Y /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1: total 5652 -rw-r--r-- 1 jenkins jenkins 42615 Oct 31 08:56 build.log -rw-r--r-- 1 jenkins jenkins 4059652 Oct 31 08:56 golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb -rw-r--r-- 1 jenkins jenkins 1649188 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2072 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2.dsc -rw-r--r-- 1 jenkins jenkins 6620 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 7502 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1486 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1653 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2: total 0 Fri Oct 31 08:56:20 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 30 20:53:25 -12 2025 I: pbuilder-time-stamp: 1761900805 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [golang-github-brentp-irelate_0.0.1+ds-2.dsc] I: copying [./golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz] I: copying [./golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./golang-github-brentp-irelate_0.0.1+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting golang-github-brentp-irelate in golang-github-brentp-irelate-0.0.1+ds dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1251201/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='4d0736f1de474875b52113ff4a217282' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1251201' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_Kz09 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1 --logfile b1/build.log golang-github-brentp-irelate_0.0.1+ds-2.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1251201/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-biogo-hts-dev, golang-gopkg-check.v1-dev, golang-github-pkg-errors-dev, golang-github-brentp-vcfgo-dev, golang-github-brentp-bix-dev, samtools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-golang; however: Package dh-golang is not installed. pbuilder-satisfydepends-dummy depends on golang-any; however: Package golang-any is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-hts-dev; however: Package golang-github-biogo-hts-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-gopkg-check.v1-dev; however: Package golang-gopkg-check.v1-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-pkg-errors-dev; however: Package golang-github-pkg-errors-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-brentp-vcfgo-dev; however: Package golang-github-brentp-vcfgo-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-brentp-bix-dev; however: Package golang-github-brentp-bix-dev is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} binutils-gold{a} binutils-gold-aarch64-linux-gnu{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-golang{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} golang-1.24-go{a} golang-1.24-src{a} golang-any{a} golang-github-biogo-hts-dev{a} golang-github-brentp-bix-dev{a} golang-github-brentp-vcfgo-dev{a} golang-github-creack-pty-dev{a} golang-github-kr-pretty-dev{a} golang-github-kr-text-dev{a} golang-github-pkg-errors-dev{a} golang-github-rogpeppe-go-internal-dev{a} golang-github-ulikunitz-xz-dev{a} golang-github-yuin-goldmark-dev{a} golang-go{a} golang-golang-x-crypto-dev{a} golang-golang-x-mod-dev{a} golang-golang-x-net-dev{a} golang-golang-x-sync-dev{a} golang-golang-x-sys-dev{a} golang-golang-x-term-dev{a} golang-golang-x-text-dev{a} golang-golang-x-tools-dev{a} golang-gopkg-check.v1-dev{a} golang-src{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} samtools{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pkgconf publicsuffix wget 0 packages upgraded, 84 newly installed, 0 to remove and 0 not upgraded. Need to get 77.2 MB of archives. After unpacking 415 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 binutils-gold-aarch64-linux-gnu arm64 2.44-3 [1700 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 binutils-gold arm64 2.44-3 [202 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-7 [540 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 24 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-1 [184 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.1+dfsg-0.3 [591 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 dh-golang all 1.63 [24.4 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 golang-1.24-src all 1.24.9-1 [21.2 MB] Get: 34 http://deb.debian.org/debian unstable/main arm64 golang-1.24-go arm64 1.24.9-1 [24.7 MB] Get: 35 http://deb.debian.org/debian unstable/main arm64 golang-src all 2:1.24~2 [5136 B] Get: 36 http://deb.debian.org/debian unstable/main arm64 golang-go arm64 2:1.24~2 [44.3 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 golang-any arm64 2:1.24~2 [5216 B] Get: 38 http://deb.debian.org/debian unstable/main arm64 golang-github-ulikunitz-xz-dev all 0.5.15-1 [3080 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 golang-github-biogo-hts-dev all 1.4.5+dfsg1-2 [319 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 golang-github-pkg-errors-dev all 0.9.1-3 [12.9 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 golang-github-creack-pty-dev all 1.1.21-1 [13.0 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 golang-github-kr-text-dev all 0.2.0-2 [10.2 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-mod-dev all 0.19.0-1 [104 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-sys-dev all 0.36.0-1 [640 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 golang-github-yuin-goldmark-dev all 1.7.13-1 [113 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-term-dev all 0.35.0-1 [16.1 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-text-dev all 0.29.0-2 [3992 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-crypto-dev all 1:0.43.0-2 [1950 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-net-dev all 1:0.27.0-2 [904 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-sync-dev all 0.7.0-1 [19.0 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-tools-dev all 1:0.25.0+ds-1 [1608 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 golang-github-rogpeppe-go-internal-dev all 1.14.1-1 [103 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 golang-github-kr-pretty-dev all 0.3.1-1 [11.9 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 golang-gopkg-check.v1-dev all 0.0+git20200902.038fdea-2 [31.2 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 golang-github-brentp-bix-dev all 0.0~git20250701.000f089+ds-1 [8668 B] Get: 56 http://deb.debian.org/debian unstable/main arm64 golang-github-brentp-vcfgo-dev all 0.0~git20250902.a31336c-1 [43.4 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.12.0-1 [63.6 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.16.0-1 [123 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.9-2 [420 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.10-3 [1384 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 69 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.16.0-1 [23.8 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.17.0~rc3-1 [362 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 libhtscodecs2 arm64 1.6.1-2 [74.7 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 libhts3t64 arm64 1.22.1+ds2-1 [434 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5+20250216-2 [96.1 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 samtools arm64 1.22.1-1 [666 kB] Fetched 77.2 MB in 1s (110 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-4_arm64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_arm64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package binutils-gold-aarch64-linux-gnu. Preparing to unpack .../15-binutils-gold-aarch64-linux-gnu_2.44-3_arm64.deb ... Unpacking binutils-gold-aarch64-linux-gnu (2.44-3) ... Selecting previously unselected package binutils-gold. Preparing to unpack .../16-binutils-gold_2.44-3_arm64.deb ... Unpacking binutils-gold (2.44-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.5.4-7_all.deb ... Unpacking libtool (2.5.4-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../19-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../23-libelf1t64_0.194-1_arm64.deb ... Unpacking libelf1t64:arm64 (0.194-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.16-2_arm64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../25-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../26-libxml2-16_2.15.1+dfsg-0.3_arm64.deb ... Unpacking libxml2-16:arm64 (2.15.1+dfsg-0.3) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.23.1-2+b1_arm64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Selecting previously unselected package dh-golang. Preparing to unpack .../31-dh-golang_1.63_all.deb ... Unpacking dh-golang (1.63) ... Selecting previously unselected package golang-1.24-src. Preparing to unpack .../32-golang-1.24-src_1.24.9-1_all.deb ... Unpacking golang-1.24-src (1.24.9-1) ... Selecting previously unselected package golang-1.24-go. Preparing to unpack .../33-golang-1.24-go_1.24.9-1_arm64.deb ... Unpacking golang-1.24-go (1.24.9-1) ... Selecting previously unselected package golang-src. Preparing to unpack .../34-golang-src_2%3a1.24~2_all.deb ... Unpacking golang-src (2:1.24~2) ... Selecting previously unselected package golang-go:arm64. Preparing to unpack .../35-golang-go_2%3a1.24~2_arm64.deb ... Unpacking golang-go:arm64 (2:1.24~2) ... Selecting previously unselected package golang-any:arm64. Preparing to unpack .../36-golang-any_2%3a1.24~2_arm64.deb ... Unpacking golang-any:arm64 (2:1.24~2) ... Selecting previously unselected package golang-github-ulikunitz-xz-dev. Preparing to unpack .../37-golang-github-ulikunitz-xz-dev_0.5.15-1_all.deb ... Unpacking golang-github-ulikunitz-xz-dev (0.5.15-1) ... Selecting previously unselected package golang-github-biogo-hts-dev. Preparing to unpack .../38-golang-github-biogo-hts-dev_1.4.5+dfsg1-2_all.deb ... Unpacking golang-github-biogo-hts-dev (1.4.5+dfsg1-2) ... Selecting previously unselected package golang-github-pkg-errors-dev. Preparing to unpack .../39-golang-github-pkg-errors-dev_0.9.1-3_all.deb ... Unpacking golang-github-pkg-errors-dev (0.9.1-3) ... Selecting previously unselected package golang-github-creack-pty-dev. Preparing to unpack .../40-golang-github-creack-pty-dev_1.1.21-1_all.deb ... Unpacking golang-github-creack-pty-dev (1.1.21-1) ... Selecting previously unselected package golang-github-kr-text-dev. Preparing to unpack .../41-golang-github-kr-text-dev_0.2.0-2_all.deb ... Unpacking golang-github-kr-text-dev (0.2.0-2) ... Selecting previously unselected package golang-golang-x-mod-dev. Preparing to unpack .../42-golang-golang-x-mod-dev_0.19.0-1_all.deb ... Unpacking golang-golang-x-mod-dev (0.19.0-1) ... Selecting previously unselected package golang-golang-x-sys-dev. Preparing to unpack .../43-golang-golang-x-sys-dev_0.36.0-1_all.deb ... Unpacking golang-golang-x-sys-dev (0.36.0-1) ... Selecting previously unselected package golang-github-yuin-goldmark-dev. Preparing to unpack .../44-golang-github-yuin-goldmark-dev_1.7.13-1_all.deb ... Unpacking golang-github-yuin-goldmark-dev (1.7.13-1) ... Selecting previously unselected package golang-golang-x-term-dev. Preparing to unpack .../45-golang-golang-x-term-dev_0.35.0-1_all.deb ... Unpacking golang-golang-x-term-dev (0.35.0-1) ... Selecting previously unselected package golang-golang-x-text-dev. Preparing to unpack .../46-golang-golang-x-text-dev_0.29.0-2_all.deb ... Unpacking golang-golang-x-text-dev (0.29.0-2) ... Selecting previously unselected package golang-golang-x-crypto-dev. Preparing to unpack .../47-golang-golang-x-crypto-dev_1%3a0.43.0-2_all.deb ... Unpacking golang-golang-x-crypto-dev (1:0.43.0-2) ... Selecting previously unselected package golang-golang-x-net-dev. Preparing to unpack .../48-golang-golang-x-net-dev_1%3a0.27.0-2_all.deb ... Unpacking golang-golang-x-net-dev (1:0.27.0-2) ... Selecting previously unselected package golang-golang-x-sync-dev. Preparing to unpack .../49-golang-golang-x-sync-dev_0.7.0-1_all.deb ... Unpacking golang-golang-x-sync-dev (0.7.0-1) ... Selecting previously unselected package golang-golang-x-tools-dev. Preparing to unpack .../50-golang-golang-x-tools-dev_1%3a0.25.0+ds-1_all.deb ... Unpacking golang-golang-x-tools-dev (1:0.25.0+ds-1) ... Selecting previously unselected package golang-github-rogpeppe-go-internal-dev. Preparing to unpack .../51-golang-github-rogpeppe-go-internal-dev_1.14.1-1_all.deb ... Unpacking golang-github-rogpeppe-go-internal-dev (1.14.1-1) ... Selecting previously unselected package golang-github-kr-pretty-dev. Preparing to unpack .../52-golang-github-kr-pretty-dev_0.3.1-1_all.deb ... Unpacking golang-github-kr-pretty-dev (0.3.1-1) ... Selecting previously unselected package golang-gopkg-check.v1-dev. Preparing to unpack .../53-golang-gopkg-check.v1-dev_0.0+git20200902.038fdea-2_all.deb ... Unpacking golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-2) ... Selecting previously unselected package golang-github-brentp-bix-dev. Preparing to unpack .../54-golang-github-brentp-bix-dev_0.0~git20250701.000f089+ds-1_all.deb ... Unpacking golang-github-brentp-bix-dev (0.0~git20250701.000f089+ds-1) ... Selecting previously unselected package golang-github-brentp-vcfgo-dev. Preparing to unpack .../55-golang-github-brentp-vcfgo-dev_0.0~git20250902.a31336c-1_all.deb ... Unpacking golang-github-brentp-vcfgo-dev (0.0~git20250902.a31336c-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../56-libbrotli1_1.1.0-2+b7_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b7) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../57-libcom-err2_1.47.2-3+b3_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.2-3+b3) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../58-libnghttp3-9_1.12.0-1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.12.0-1) ... Selecting previously unselected package libngtcp2-16:arm64. Preparing to unpack .../59-libngtcp2-16_1.16.0-1_arm64.deb ... Unpacking libngtcp2-16:arm64 (1.16.0-1) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../60-libidn2-0_2.3.8-4_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.8-4) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../61-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../62-libp11-kit0_0.25.9-2_arm64.deb ... Unpacking libp11-kit0:arm64 (0.25.9-2) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../63-libtasn1-6_4.20.0-2_arm64.deb ... Unpacking libtasn1-6:arm64 (4.20.0-2) ... Selecting previously unselected package libgnutls30t64:arm64. Preparing to unpack .../64-libgnutls30t64_3.8.10-3_arm64.deb ... Unpacking libgnutls30t64:arm64 (3.8.10-3) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../65-libkrb5support0_1.21.3-5_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-5) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../66-libk5crypto3_1.21.3-5_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-5) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../67-libkeyutils1_1.6.3-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-6) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../68-libkrb5-3_1.21.3-5_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-5) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../69-libgssapi-krb5-2_1.21.3-5_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-5) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../70-libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../71-libsasl2-2_2.1.28+dfsg1-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-10) ... Selecting previously unselected package libldap2:arm64. Preparing to unpack .../72-libldap2_2.6.10+dfsg-1_arm64.deb ... Unpacking libldap2:arm64 (2.6.10+dfsg-1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../73-libnghttp2-14_1.64.0-1.1+b1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:arm64. Preparing to unpack .../74-libngtcp2-crypto-gnutls8_1.16.0-1_arm64.deb ... Unpacking libngtcp2-crypto-gnutls8:arm64 (1.16.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../75-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../76-librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../77-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl3t64-gnutls:arm64. Preparing to unpack .../78-libcurl3t64-gnutls_8.17.0~rc3-1_arm64.deb ... Unpacking libcurl3t64-gnutls:arm64 (8.17.0~rc3-1) ... Selecting previously unselected package libdeflate0:arm64. Preparing to unpack .../79-libdeflate0_1.23-2_arm64.deb ... Unpacking libdeflate0:arm64 (1.23-2) ... Selecting previously unselected package libhtscodecs2:arm64. Preparing to unpack .../80-libhtscodecs2_1.6.1-2_arm64.deb ... Unpacking libhtscodecs2:arm64 (1.6.1-2) ... Selecting previously unselected package libhts3t64:arm64. Preparing to unpack .../81-libhts3t64_1.22.1+ds2-1_arm64.deb ... Unpacking libhts3t64:arm64 (1.22.1+ds2-1) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../82-libncurses6_6.5+20250216-2_arm64.deb ... Unpacking libncurses6:arm64 (6.5+20250216-2) ... Selecting previously unselected package samtools. Preparing to unpack .../83-samtools_1.22.1-1_arm64.deb ... Unpacking samtools (1.22.1-1) ... Setting up libhtscodecs2:arm64 (1.6.1-2) ... Setting up golang-1.24-src (1.24.9-1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libkeyutils1:arm64 (1.6.3-6) ... Setting up bsdextrautils (2.41.2-4) ... Setting up golang-github-creack-pty-dev (1.1.21-1) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up golang-github-pkg-errors-dev (0.9.1-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:arm64 (2.15.1+dfsg-0.3) ... Setting up libdebhelper-perl (13.28) ... Setting up libbrotli1:arm64 (1.1.0-2+b7) ... Setting up golang-golang-x-sys-dev (0.36.0-1) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Setting up libdeflate0:arm64 (1.23-2) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up binutils-gold-aarch64-linux-gnu (2.44-3) ... Setting up golang-golang-x-term-dev (0.35.0-1) ... Setting up libcom-err2:arm64 (1.47.2-3+b3) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.194-1) ... Setting up libkrb5support0:arm64 (1.21.3-5) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-10) ... Setting up autotools-dev (20240727.1) ... Setting up golang-github-kr-text-dev (0.2.0-2) ... Setting up golang-github-yuin-goldmark-dev (1.7.13-1) ... Setting up libncurses6:arm64 (6.5+20250216-2) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up golang-golang-x-sync-dev (0.7.0-1) ... Setting up golang-golang-x-mod-dev (0.19.0-1) ... Setting up autopoint (0.23.1-2) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-10) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:arm64 (1.12.0-1) ... Setting up libffi8:arm64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up golang-golang-x-text-dev (0.29.0-2) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up libngtcp2-16:arm64 (1.16.0-1) ... Setting up golang-golang-x-crypto-dev (1:0.43.0-2) ... Setting up libkrb5-3:arm64 (1.21.3-5) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up golang-src (2:1.24~2) ... Setting up libldap2:arm64 (2.6.10+dfsg-1) ... Setting up golang-github-ulikunitz-xz-dev (0.5.15-1) ... Setting up automake (1:1.18.1-2) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-7) ... Setting up binutils-gold (2.44-3) ... Setting up libidn2-0:arm64 (2.3.8-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libp11-kit0:arm64 (0.25.9-2) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up golang-github-biogo-hts-dev (1.4.5+dfsg1-2) ... Setting up golang-1.24-go (1.24.9-1) ... Setting up golang-golang-x-net-dev (1:0.27.0-2) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libgnutls30t64:arm64 (3.8.10-3) ... Setting up golang-go:arm64 (2:1.24~2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up golang-golang-x-tools-dev (1:0.25.0+ds-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up golang-any:arm64 (2:1.24~2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Setting up golang-github-rogpeppe-go-internal-dev (1.14.1-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.16.0-1) ... Setting up golang-github-kr-pretty-dev (0.3.1-1) ... Setting up libcurl3t64-gnutls:arm64 (8.17.0~rc3-1) ... Setting up debhelper (13.28) ... Setting up golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-2) ... Setting up libhts3t64:arm64 (1.22.1+ds2-1) ... Setting up golang-github-brentp-bix-dev (0.0~git20250701.000f089+ds-1) ... Setting up dh-golang (1.63) ... Setting up golang-github-brentp-vcfgo-dev (0.0~git20250902.a31336c-1) ... Setting up samtools (1.22.1-1) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-brentp-irelate_0.0.1+ds-2_source.changes dpkg-buildpackage: info: source package golang-github-brentp-irelate dpkg-buildpackage: info: source version 0.0.1+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary dh binary --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' # The DH_GOLANG_INSTALL_EXTRA is configured during dh_auto_configure, hence generating the needed generated files at this step echo 'Generating corresponding files ...' Generating corresponding files ... cat debian/missing-sources/ex.sam| samtools view -Sb - > data/ex.bam samtools index data/ex.bam data/ex.bam.bai dh_auto_configure make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers internal/unsafeheader internal/byteorder internal/profilerecord internal/goos internal/coverage/rtcov internal/goarch internal/goexperiment internal/godebugs internal/asan internal/msan math/bits cmp internal/itoa internal/cpu internal/abi internal/runtime/syscall sync/atomic internal/runtime/math unicode/utf8 unicode log/internal internal/chacha8rand math internal/bytealg internal/runtime/atomic internal/runtime/sys internal/runtime/exithook internal/stringslite internal/race internal/runtime/maps internal/sync runtime iter internal/reflectlite sync weak maps slices sort errors strconv internal/oserror path io internal/bisect internal/testlog unique syscall internal/godebug container/heap strings hash bytes hash/crc32 github.com/brentp/irelate/interfaces net/netip regexp/syntax reflect bufio time internal/syscall/unix internal/syscall/execenv regexp io/fs context internal/poll internal/filepathlite os encoding/binary internal/fmtsort os/signal fmt encoding/hex net/url encoding/csv log compress/flate github.com/pkg/errors text/tabwriter github.com/brentp/vcfgo compress/gzip github.com/biogo/hts/bgzf runtime/pprof github.com/biogo/hts/bgzf/index github.com/biogo/hts/csi github.com/biogo/hts/internal github.com/biogo/hts/tabix github.com/biogo/hts/sam github.com/biogo/hts/bam github.com/brentp/irelate/parsers github.com/brentp/bix github.com/brentp/irelate github.com/brentp/irelate/main dh_auto_test -O--builddirectory=_build -O--buildsystem=golang cd _build && go test -vet=off -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers === RUN TestInterval --- PASS: TestInterval (0.00s) === RUN TestIntervalSource --- PASS: TestIntervalSource (0.00s) === RUN TestIntervalLine --- PASS: TestIntervalLine (0.00s) PASS ok github.com/brentp/irelate 0.016s ? github.com/brentp/irelate/interfaces [no test files] ? github.com/brentp/irelate/main [no test files] === RUN Test OK: 1 passed --- PASS: Test (0.02s) PASS ok github.com/brentp/irelate/parsers 0.040s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_install -- --no-binaries make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_installdocs -O--builddirectory=_build -O--buildsystem=golang dh_installchangelogs -O--builddirectory=_build -O--buildsystem=golang dh_installsystemduser -O--builddirectory=_build -O--buildsystem=golang dh_perl -O--builddirectory=_build -O--buildsystem=golang dh_link -O--builddirectory=_build -O--buildsystem=golang dh_strip_nondeterminism -O--builddirectory=_build -O--buildsystem=golang dh_compress -O--builddirectory=_build -O--buildsystem=golang dh_fixperms -O--builddirectory=_build -O--buildsystem=golang dh_missing -O--builddirectory=_build -O--buildsystem=golang dh_installdeb -O--builddirectory=_build -O--buildsystem=golang dh_golang -O--builddirectory=_build -O--buildsystem=golang dh_gencontrol -O--builddirectory=_build -O--buildsystem=golang dh_md5sums -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -O--builddirectory=_build -O--buildsystem=golang dpkg-deb: building package 'golang-github-brentp-irelate-dev' in '../golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo dpkg-genchanges --build=binary -O../golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1251201 and its subdirectories I: Current time: Thu Oct 30 20:56:16 -12 2025 I: pbuilder-time-stamp: 1761900976 Fri Oct 31 08:56:21 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Fri Oct 31 08:56:21 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Fri Oct 31 08:56:21 UTC 2025 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Oct 31 08:56:21 UTC 2025 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-uSigSc' ==================================================================================== Fri Oct 31 08:56:21 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "2 golang-github-brentp-irelate unstable /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ 0.0.1+ds-2" as arguments. Fri Oct 31 08:56:21 UTC 2025 - actually running "reproducible_build.sh" (md5sum cc591790ab2c8e13f5e554202b95c89c) as "/tmp/jenkins-script-x2Okl7Oo" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Oct 31 08:56:21 UTC 2025 I: Downloading source for unstable/golang-github-brentp-irelate=0.0.1+ds-2 Reading package lists... NOTICE: 'golang-github-brentp-irelate' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git Please use: git clone https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1734 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (dsc) [2072 B] Get:2 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (tar) [82.7 kB] Get:3 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (diff) [1649 kB] Fetched 1734 kB in 0s (75.0 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'golang-github-brentp-irelate' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git Please use: git clone https://salsa.debian.org/go-team/packages/golang-github-brentp-irelate.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1734 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (dsc) [2072 B] Get:2 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (tar) [82.7 kB] Get:3 http://deb.debian.org/debian unstable/main golang-github-brentp-irelate 0.0.1+ds-2 (diff) [1649 kB] Fetched 1734 kB in 0s (75.0 MB/s) Download complete and in download only mode ============================================================================= Re-Building golang-github-brentp-irelate in unstable on arm64 on codethink03-arm64 now. Date: Fri Oct 31 08:56:22 GMT 2025 Date UTC: Fri Oct 31 08:56:22 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_vOoM + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' golang-github-brentp-irelate = debian-installer -o golang-github-brentp-irelate = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' golang-github-brentp-irelate = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_vOoM --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2 --logfile b2/build.log golang-github-brentp-irelate_0.0.1+ds-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Oct 31 22:56:22 +14 2025 I: pbuilder-time-stamp: 1761900982 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] tar: ./build: time stamp 2026-11-30 04:05:37 is 34060154.37335367 s in the future tar: ./dev/null: time stamp 2026-11-30 04:05:25 is 34060142.37324851 s in the future tar: ./dev/zero: time stamp 2026-11-30 04:05:25 is 34060142.37323807 s in the future tar: ./dev/full: time stamp 2026-11-30 04:05:25 is 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tar: ./usr/include/mips64el-linux-gnuabi64: time stamp 2026-11-30 04:05:36 is 34060148.38597471 s in the future tar: ./usr/include/mips64-linux-gnuabi64/asm: time stamp 2026-11-30 04:05:36 is 34060148.38596711 s in the future tar: ./usr/include/mips64-linux-gnuabi64: time stamp 2026-11-30 04:05:36 is 34060148.38595927 s in the future tar: ./usr/include/mips-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38595123 s in the future tar: ./usr/include/mips-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38594431 s in the future tar: ./usr/include/m68k-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38593691 s in the future tar: ./usr/include/m68k-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38592647 s in the future tar: ./usr/include/loongarch64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38591911 s in the future tar: ./usr/include/loongarch64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38591227 s in the future tar: ./usr/include/i386-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38590395 s in the future tar: ./usr/include/i386-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38589731 s in the future tar: ./usr/include/hppa-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38589023 s in the future tar: ./usr/include/hppa-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38588423 s in the future tar: ./usr/include/arm-linux-gnueabihf/asm: time stamp 2026-11-30 04:05:36 is 34060148.38587631 s in the future tar: ./usr/include/arm-linux-gnueabihf: time stamp 2026-11-30 04:05:36 is 34060148.38586915 s in the future tar: ./usr/include/arm-linux-gnueabi/asm: time stamp 2026-11-30 04:05:36 is 34060148.38586163 s in the future tar: ./usr/include/arm-linux-gnueabi: time stamp 2026-11-30 04:05:36 is 34060148.38585183 s in the future tar: ./usr/include/alpha-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38584431 s in the future tar: ./usr/include/alpha-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38583775 s in the future tar: ./usr/include/aarch64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38583015 s in the future tar: ./usr/include/aarch64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38582223 s in the future tar: ./usr/include: time stamp 2026-11-30 04:05:37 is 34060149.38581515 s in the future tar: ./usr/bin: time stamp 2026-11-30 04:05:44 is 34060156.38580863 s in the future tar: ./usr: time stamp 2026-11-30 04:05:25 is 34060137.38579903 s in the future tar: ./etc/systemd/system/timers.target.wants: time stamp 2026-11-30 04:05:37 is 34060149.38578687 s in the future tar: ./etc/systemd/system: time stamp 2026-11-30 04:05:25 is 34060137.38577875 s in the future tar: ./etc/alternatives: time stamp 2026-11-30 04:05:44 is 34060156.38576755 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [golang-github-brentp-irelate_0.0.1+ds-2.dsc] I: copying [./golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz] I: copying [./golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./golang-github-brentp-irelate_0.0.1+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting golang-github-brentp-irelate in golang-github-brentp-irelate-0.0.1+ds dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds.orig.tar.xz dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Oct 31 08:56 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.3.3(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=155b58a00f424b508d06c37a149b955e LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3555789 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_vOoM --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2 --logfile b2/build.log golang-github-brentp-irelate_0.0.1+ds-2.dsc' SUDO_GID=109 SUDO_HOME=/var/lib/jenkins SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-biogo-hts-dev, golang-gopkg-check.v1-dev, golang-github-pkg-errors-dev, golang-github-brentp-vcfgo-dev, golang-github-brentp-bix-dev, samtools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-golang; however: Package dh-golang is not installed. pbuilder-satisfydepends-dummy depends on golang-any; however: Package golang-any is not installed. pbuilder-satisfydepends-dummy depends on golang-github-biogo-hts-dev; however: Package golang-github-biogo-hts-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-gopkg-check.v1-dev; however: Package golang-gopkg-check.v1-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-pkg-errors-dev; however: Package golang-github-pkg-errors-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-brentp-vcfgo-dev; however: Package golang-github-brentp-vcfgo-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-brentp-bix-dev; however: Package golang-github-brentp-bix-dev is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} binutils-gold{a} binutils-gold-aarch64-linux-gnu{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-golang{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} golang-1.24-go{a} golang-1.24-src{a} golang-any{a} golang-github-biogo-hts-dev{a} golang-github-brentp-bix-dev{a} golang-github-brentp-vcfgo-dev{a} golang-github-creack-pty-dev{a} golang-github-kr-pretty-dev{a} golang-github-kr-text-dev{a} golang-github-pkg-errors-dev{a} golang-github-rogpeppe-go-internal-dev{a} golang-github-ulikunitz-xz-dev{a} golang-github-yuin-goldmark-dev{a} golang-go{a} golang-golang-x-crypto-dev{a} golang-golang-x-mod-dev{a} golang-golang-x-net-dev{a} golang-golang-x-sync-dev{a} golang-golang-x-sys-dev{a} golang-golang-x-term-dev{a} golang-golang-x-text-dev{a} golang-golang-x-tools-dev{a} golang-gopkg-check.v1-dev{a} golang-src{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgnutls30t64{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libidn2-0{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libp11-kit0{a} libpipeline1{a} libpsl5t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} po-debconf{a} samtools{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pkgconf publicsuffix wget 0 packages upgraded, 84 newly installed, 0 to remove and 0 not upgraded. Need to get 77.2 MB of archives. After unpacking 415 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-2 [877 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 binutils-gold-aarch64-linux-gnu arm64 2.44-3 [1700 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 binutils-gold arm64 2.44-3 [202 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-7 [540 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 24 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-1 [184 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.1+dfsg-0.3 [591 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 dh-golang all 1.63 [24.4 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 golang-1.24-src all 1.24.9-1 [21.2 MB] Get: 34 http://deb.debian.org/debian unstable/main arm64 golang-1.24-go arm64 1.24.9-1 [24.7 MB] Get: 35 http://deb.debian.org/debian unstable/main arm64 golang-src all 2:1.24~2 [5136 B] Get: 36 http://deb.debian.org/debian unstable/main arm64 golang-go arm64 2:1.24~2 [44.3 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 golang-any arm64 2:1.24~2 [5216 B] Get: 38 http://deb.debian.org/debian unstable/main arm64 golang-github-ulikunitz-xz-dev all 0.5.15-1 [3080 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 golang-github-biogo-hts-dev all 1.4.5+dfsg1-2 [319 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 golang-github-pkg-errors-dev all 0.9.1-3 [12.9 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 golang-github-creack-pty-dev all 1.1.21-1 [13.0 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 golang-github-kr-text-dev all 0.2.0-2 [10.2 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-mod-dev all 0.19.0-1 [104 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-sys-dev all 0.36.0-1 [640 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 golang-github-yuin-goldmark-dev all 1.7.13-1 [113 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-term-dev all 0.35.0-1 [16.1 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-text-dev all 0.29.0-2 [3992 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-crypto-dev all 1:0.43.0-2 [1950 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-net-dev all 1:0.27.0-2 [904 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-sync-dev all 0.7.0-1 [19.0 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 golang-golang-x-tools-dev all 1:0.25.0+ds-1 [1608 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 golang-github-rogpeppe-go-internal-dev all 1.14.1-1 [103 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 golang-github-kr-pretty-dev all 0.3.1-1 [11.9 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 golang-gopkg-check.v1-dev all 0.0+git20200902.038fdea-2 [31.2 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 golang-github-brentp-bix-dev all 0.0~git20250701.000f089+ds-1 [8668 B] Get: 56 http://deb.debian.org/debian unstable/main arm64 golang-github-brentp-vcfgo-dev all 0.0~git20250902.a31336c-1 [43.4 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.12.0-1 [63.6 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.16.0-1 [123 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.9-2 [420 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.10-3 [1384 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 69 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.16.0-1 [23.8 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.17.0~rc3-1 [362 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 libhtscodecs2 arm64 1.6.1-2 [74.7 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 libhts3t64 arm64 1.22.1+ds2-1 [434 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5+20250216-2 [96.1 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 samtools arm64 1.22.1-1 [666 kB] Fetched 77.2 MB in 0s (162 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.41.2-4_arm64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.20-2_arm64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.18.1-2_all.deb ... Unpacking automake (1:1.18.1-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package binutils-gold-aarch64-linux-gnu. Preparing to unpack .../15-binutils-gold-aarch64-linux-gnu_2.44-3_arm64.deb ... Unpacking binutils-gold-aarch64-linux-gnu (2.44-3) ... Selecting previously unselected package binutils-gold. Preparing to unpack .../16-binutils-gold_2.44-3_arm64.deb ... Unpacking binutils-gold (2.44-3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.5.4-7_all.deb ... Unpacking libtool (2.5.4-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../19-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../23-libelf1t64_0.194-1_arm64.deb ... Unpacking libelf1t64:arm64 (0.194-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.16-2_arm64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../25-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../26-libxml2-16_2.15.1+dfsg-0.3_arm64.deb ... Unpacking libxml2-16:arm64 (2.15.1+dfsg-0.3) ... Selecting previously unselected package gettext. 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Setting up libtool (2.5.4-7) ... Setting up binutils-gold (2.44-3) ... Setting up libidn2-0:arm64 (2.3.8-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libp11-kit0:arm64 (0.25.9-2) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up golang-github-biogo-hts-dev (1.4.5+dfsg1-2) ... Setting up golang-1.24-go (1.24.9-1) ... Setting up golang-golang-x-net-dev (1:0.27.0-2) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libgnutls30t64:arm64 (3.8.10-3) ... Setting up golang-go:arm64 (2:1.24~2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up golang-golang-x-tools-dev (1:0.25.0+ds-1) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up golang-any:arm64 (2:1.24~2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Setting up golang-github-rogpeppe-go-internal-dev (1.14.1-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.16.0-1) ... Setting up golang-github-kr-pretty-dev (0.3.1-1) ... Setting up libcurl3t64-gnutls:arm64 (8.17.0~rc3-1) ... Setting up debhelper (13.28) ... Setting up golang-gopkg-check.v1-dev (0.0+git20200902.038fdea-2) ... Setting up libhts3t64:arm64 (1.22.1+ds2-1) ... Setting up golang-github-brentp-bix-dev (0.0~git20250701.000f089+ds-1) ... Setting up dh-golang (1.63) ... Setting up golang-github-brentp-vcfgo-dev (0.0~git20250902.a31336c-1) ... Setting up samtools (1.22.1-1) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-brentp-irelate_0.0.1+ds-2_source.changes dpkg-buildpackage: info: source package golang-github-brentp-irelate dpkg-buildpackage: info: source version 0.0.1+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary dh binary --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' # The DH_GOLANG_INSTALL_EXTRA is configured during dh_auto_configure, hence generating the needed generated files at this step echo 'Generating corresponding files ...' Generating corresponding files ... cat debian/missing-sources/ex.sam| samtools view -Sb - > data/ex.bam samtools index data/ex.bam data/ex.bam.bai dh_auto_configure make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers internal/byteorder internal/asan math/bits internal/profilerecord internal/goos internal/coverage/rtcov internal/cpu internal/unsafeheader internal/godebugs internal/goexperiment internal/msan internal/goarch internal/runtime/syscall cmp unicode/utf8 internal/itoa sync/atomic log/internal unicode math internal/chacha8rand internal/runtime/math internal/abi internal/bytealg internal/runtime/atomic internal/runtime/sys internal/stringslite internal/runtime/exithook internal/race internal/sync internal/runtime/maps runtime iter internal/reflectlite weak sync maps slices sort errors internal/oserror path io strconv internal/bisect unique internal/testlog syscall bytes strings hash internal/godebug container/heap hash/crc32 net/netip reflect bufio regexp/syntax github.com/brentp/irelate/interfaces regexp time internal/syscall/execenv internal/syscall/unix internal/poll context io/fs internal/filepathlite internal/fmtsort encoding/binary os os/signal fmt encoding/hex compress/flate net/url github.com/pkg/errors text/tabwriter encoding/csv log github.com/brentp/vcfgo compress/gzip github.com/biogo/hts/bgzf runtime/pprof github.com/biogo/hts/bgzf/index github.com/biogo/hts/csi github.com/biogo/hts/internal github.com/biogo/hts/tabix github.com/biogo/hts/sam github.com/biogo/hts/bam github.com/brentp/irelate/parsers github.com/brentp/bix github.com/brentp/irelate github.com/brentp/irelate/main dh_auto_test -O--builddirectory=_build -O--buildsystem=golang cd _build && go test -vet=off -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers === RUN TestInterval --- PASS: TestInterval (0.00s) === RUN TestIntervalSource --- PASS: TestIntervalSource (0.00s) === RUN TestIntervalLine --- PASS: TestIntervalLine (0.00s) PASS ok github.com/brentp/irelate 0.004s ? github.com/brentp/irelate/interfaces [no test files] ? github.com/brentp/irelate/main [no test files] === RUN Test OK: 1 passed --- PASS: Test (0.01s) PASS ok github.com/brentp/irelate/parsers 0.021s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_install -- --no-binaries make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_installdocs -O--builddirectory=_build -O--buildsystem=golang dh_installchangelogs -O--builddirectory=_build -O--buildsystem=golang dh_installsystemduser -O--builddirectory=_build -O--buildsystem=golang dh_perl -O--builddirectory=_build -O--buildsystem=golang dh_link -O--builddirectory=_build -O--buildsystem=golang dh_strip_nondeterminism -O--builddirectory=_build -O--buildsystem=golang dh_compress -O--builddirectory=_build -O--buildsystem=golang dh_fixperms -O--builddirectory=_build -O--buildsystem=golang dh_missing -O--builddirectory=_build -O--buildsystem=golang dh_installdeb -O--builddirectory=_build -O--buildsystem=golang dh_golang -O--builddirectory=_build -O--buildsystem=golang dh_gencontrol -O--builddirectory=_build -O--buildsystem=golang dh_md5sums -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -O--builddirectory=_build -O--buildsystem=golang dpkg-deb: building package 'golang-github-brentp-irelate-dev' in '../golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo dpkg-genchanges --build=binary -O../golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3555789 and its subdirectories I: Current time: Fri Oct 31 22:57:19 +14 2025 I: pbuilder-time-stamp: 1761901039 + false Fri Oct 31 08:57:19 UTC 2025 I: Signing ./b2/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo as golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc + set +x Fri Oct 31 08:57:19 UTC 2025 I: Signed ./b2/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo as ./b2/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc Fri Oct 31 08:57:19 UTC 2025 - build #2 for golang-github-brentp-irelate/unstable/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Fri Oct 31 08:57:19 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-x2Okl7Oo, removing. /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ: total 60 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:56 b1 drwxrwxr-x 2 jenkins jenkins 4096 Oct 31 08:57 b2 -rw-rw-r-- 1 jenkins jenkins 2072 Oct 29 09:39 golang-github-brentp-irelate_0.0.1+ds-2.dsc -rw------- 1 jenkins jenkins 46262 Oct 31 08:56 rbuildlog.t1xTp0Y /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1: total 5660 -rw-r--r-- 1 jenkins jenkins 42615 Oct 31 08:56 build.log -rw-r--r-- 1 jenkins jenkins 4059652 Oct 31 08:56 golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb -rw-r--r-- 1 jenkins jenkins 1649188 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2072 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2.dsc -rw-r--r-- 1 jenkins jenkins 6620 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 7502 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1486 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1653 Oct 31 08:56 golang-github-brentp-irelate_0.0.1+ds-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2: total 5932 -rw-rw-r-- 1 jenkins jenkins 316295 Oct 31 08:57 build.log -rw-r--r-- 1 jenkins jenkins 4059652 Oct 31 08:57 golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb -rw-r--r-- 1 jenkins jenkins 1649188 Oct 31 08:57 golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2072 Oct 31 08:57 golang-github-brentp-irelate_0.0.1+ds-2.dsc -rw-rw-r-- 1 jenkins jenkins 6620 Oct 31 08:57 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo -rw-rw-r-- 1 jenkins jenkins 7502 Oct 31 08:57 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc -rw-rw-r-- 1 jenkins jenkins 1486 Oct 31 08:57 golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes -rw-rw-r-- 1 jenkins jenkins 1653 Oct 31 08:57 golang-github-brentp-irelate_0.0.1+ds-2_source.changes Fri Oct 31 08:57:21 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Fri Oct 31 08:57:21 UTC 2025 I: golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes: Format: 1.8 Date: Wed, 29 Oct 2025 10:10:00 +0100 Source: golang-github-brentp-irelate Binary: golang-github-brentp-irelate-dev Architecture: all Version: 0.0.1+ds-2 Distribution: unstable Urgency: medium Maintainer: Debian Go Packaging Team Changed-By: Santiago Vila Description: golang-github-brentp-irelate-dev - Streaming relation testing of sorted files of intervals Closes: 1044336 Changes: golang-github-brentp-irelate (0.0.1+ds-2) unstable; urgency=medium . * Team upload. . [ Nilesh Patra ] * Update email. . [ Santiago Vila ] * Fix clean target. Closes: #1044336. * Drop "Rules-Requires-Root: no" (default). * Drop "Priority: optional" (default). * Update standards-version. Checksums-Sha1: 63cdff7948c50a280fae572f0b99ded9b5c341cf 4059652 golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb 30ced620e6e9b3904fdb2a44707e7f2d3d29d5bf 6620 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo Checksums-Sha256: 450dbba1ee79bd73bd3c10a0a027dd66e603c64f2edcec72bc7bfcc5e3fe21bf 4059652 golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb 3ecdd0c87d7f6285d314a3847669ad8a36be2f09cd8bcba9d23b5aa39313d5cc 6620 golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo Files: 2a93d91bb2a33b2d2bf4fa84f3774e91 4059652 devel optional golang-github-brentp-irelate-dev_0.0.1+ds-2_all.deb c408d9fc2ddb8a38d3516b7750189acb 6620 devel optional golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/golang-github-brentp-irelate_0.0.1+ds-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/golang-github-brentp-irelate_0.0.1+ds-2.rbuild.log.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-10-31 08:56:17.570220964 +0000 +++ b2/build.log 2025-10-31 08:57:20.870294212 +0000 @@ -1,8 +1,2548 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Oct 30 20:53:25 -12 2025 -I: pbuilder-time-stamp: 1761900805 +I: Current time: Fri Oct 31 22:56:22 +14 2025 +I: pbuilder-time-stamp: 1761900982 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] +tar: ./build: time stamp 2026-11-30 04:05:37 is 34060154.37335367 s in the future +tar: ./dev/null: time stamp 2026-11-30 04:05:25 is 34060142.37324851 s in the future +tar: ./dev/zero: time stamp 2026-11-30 04:05:25 is 34060142.37323807 s in the future +tar: ./dev/full: time stamp 2026-11-30 04:05:25 is 34060142.37322987 s in the future +tar: ./dev/random: time stamp 2026-11-30 04:05:25 is 34060142.37322159 s in the future +tar: ./dev/urandom: time stamp 2026-11-30 04:05:25 is 34060142.37321351 s in the future +tar: ./dev/tty: time stamp 2026-11-30 04:05:25 is 34060142.37320483 s in the future +tar: ./dev/console: time stamp 2026-11-30 04:05:25 is 34060142.37319671 s in the future +tar: ./dev/pts: time stamp 2026-11-30 04:05:25 is 34060142.37318739 s in the future +tar: ./dev/ptmx: time stamp 2026-11-30 04:05:25 is 34060142.37318027 s in the future +tar: ./etc/ld.so.cache: time stamp 2026-12-01 06:31:00 is 34155277.37309179 s in the future +tar: ./etc/default: time stamp 2026-11-30 04:05:42 is 34060159.37305323 s in the future +tar: ./etc/dpkg/origins/default: time stamp 2026-11-30 04:05:25 is 34060142.37302439 s in the future +tar: ./etc/dpkg/origins: time stamp 2026-11-30 04:05:29 is 34060146.37301795 s in the future +tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time stamp 2026-11-30 04:06:06 is 34060183.37299579 s in the future +tar: ./etc/dpkg/dpkg.cfg.d: time stamp 2026-11-30 04:06:06 is 34060183.37298947 s in the future +tar: ./etc/dpkg: time stamp 2026-11-30 04:05:37 is 34060154.37296723 s in the 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the future +tar: ./usr/lib/locale/anp_IN: time stamp 2026-11-30 04:05:44 is 34060156.38630135 s in the future +tar: ./usr/lib/locale/an_ES.utf8: time stamp 2026-11-30 04:05:44 is 34060156.38629451 s in the future +tar: ./usr/lib/locale/am_ET: time stamp 2026-11-30 04:05:44 is 34060156.38628779 s in the future +tar: ./usr/lib/locale/ak_GH: time stamp 2026-11-30 04:05:44 is 34060156.38627639 s in the future +tar: ./usr/lib/locale/agr_PE: time stamp 2026-11-30 04:05:44 is 34060156.38626943 s in the future +tar: ./usr/lib/locale/af_ZA.utf8: time stamp 2026-11-30 04:05:44 is 34060156.38625887 s in the future +tar: ./usr/lib/locale/af_ZA: time stamp 2026-11-30 04:05:44 is 34060156.38625143 s in the future +tar: ./usr/lib/locale/aa_ET/LC_MESSAGES: time stamp 2026-11-30 04:05:44 is 34060156.38623995 s in the future +tar: ./usr/lib/locale/aa_ET: time stamp 2026-11-30 04:05:44 is 34060156.38623339 s in the future +tar: ./usr/lib/locale/aa_ER/LC_MESSAGES: time stamp 2026-11-30 04:05:44 is 34060156.38622167 s in the future +tar: ./usr/lib/locale/aa_ER: time stamp 2026-11-30 04:05:44 is 34060156.38621483 s in the future +tar: ./usr/lib/locale: time stamp 2026-11-30 04:05:44 is 34060156.38620467 s in the future +tar: ./usr/lib/aarch64-linux-gnu/perl/cross-config-5.40.1: time stamp 2026-11-30 04:05:35 is 34060147.38619619 s in the future +tar: ./usr/lib/aarch64-linux-gnu/perl: time stamp 2026-11-30 04:05:35 is 34060147.38618539 s in the future +tar: ./usr/lib/aarch64-linux-gnu: time stamp 2026-12-01 06:30:59 is 34155271.38617911 s in the future +tar: ./usr/lib: time stamp 2026-11-30 04:05:37 is 34060149.38617311 s in the future +tar: ./usr/include/x86_64-linux-gnux32/asm: time stamp 2026-11-30 04:05:36 is 34060148.38616487 s in the future +tar: ./usr/include/x86_64-linux-gnux32: time stamp 2026-11-30 04:05:36 is 34060148.38615819 s in the future +tar: ./usr/include/x86_64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38615075 s in the future +tar: ./usr/include/x86_64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38614251 s in the future +tar: ./usr/include/sparc64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38613395 s in the future +tar: ./usr/include/sparc64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38612791 s in the future +tar: ./usr/include/sh4-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38612015 s in the future +tar: ./usr/include/sh4-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38611355 s in the future +tar: ./usr/include/s390x-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38610583 s in the future +tar: ./usr/include/s390x-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38609787 s in the future +tar: ./usr/include/riscv64-linux-gnu/asm/vendor: time stamp 2026-11-30 04:05:36 is 34060148.38608947 s in the future +tar: ./usr/include/riscv64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38607891 s in the future +tar: ./usr/include/riscv64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38607271 s in the future +tar: ./usr/include/powerpc64le-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38606495 s in the future +tar: ./usr/include/powerpc64le-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38605807 s in the future +tar: ./usr/include/powerpc64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38605103 s in the future +tar: ./usr/include/powerpc64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38604023 s in the future +tar: ./usr/include/powerpc-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38603259 s in the future +tar: ./usr/include/powerpc-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38602219 s in the future +tar: ./usr/include/mipsisa64r6el-linux-gnuabi64/asm: time stamp 2026-11-30 04:05:36 is 34060148.38601467 s in the future +tar: ./usr/include/mipsisa64r6el-linux-gnuabi64: time stamp 2026-11-30 04:05:36 is 34060148.38600411 s in the future +tar: ./usr/include/mipsel-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38599643 s in the future +tar: ./usr/include/mipsel-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38598943 s in the future +tar: ./usr/include/mips64el-linux-gnuabi64/asm: time stamp 2026-11-30 04:05:36 is 34060148.38598159 s in the future +tar: ./usr/include/mips64el-linux-gnuabi64: time stamp 2026-11-30 04:05:36 is 34060148.38597471 s in the future +tar: ./usr/include/mips64-linux-gnuabi64/asm: time stamp 2026-11-30 04:05:36 is 34060148.38596711 s in the future +tar: ./usr/include/mips64-linux-gnuabi64: time stamp 2026-11-30 04:05:36 is 34060148.38595927 s in the future +tar: ./usr/include/mips-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38595123 s in the future +tar: ./usr/include/mips-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38594431 s in the future +tar: ./usr/include/m68k-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38593691 s in the future +tar: ./usr/include/m68k-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38592647 s in the future +tar: ./usr/include/loongarch64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38591911 s in the future +tar: ./usr/include/loongarch64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38591227 s in the future +tar: ./usr/include/i386-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38590395 s in the future +tar: ./usr/include/i386-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38589731 s in the future +tar: ./usr/include/hppa-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38589023 s in the future +tar: ./usr/include/hppa-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38588423 s in the future +tar: ./usr/include/arm-linux-gnueabihf/asm: time stamp 2026-11-30 04:05:36 is 34060148.38587631 s in the future +tar: ./usr/include/arm-linux-gnueabihf: time stamp 2026-11-30 04:05:36 is 34060148.38586915 s in the future +tar: ./usr/include/arm-linux-gnueabi/asm: time stamp 2026-11-30 04:05:36 is 34060148.38586163 s in the future +tar: ./usr/include/arm-linux-gnueabi: time stamp 2026-11-30 04:05:36 is 34060148.38585183 s in the future +tar: ./usr/include/alpha-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38584431 s in the future +tar: ./usr/include/alpha-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38583775 s in the future +tar: ./usr/include/aarch64-linux-gnu/asm: time stamp 2026-11-30 04:05:36 is 34060148.38583015 s in the future +tar: ./usr/include/aarch64-linux-gnu: time stamp 2026-11-30 04:05:36 is 34060148.38582223 s in the future +tar: ./usr/include: time stamp 2026-11-30 04:05:37 is 34060149.38581515 s in the future +tar: ./usr/bin: time stamp 2026-11-30 04:05:44 is 34060156.38580863 s in the future +tar: ./usr: time stamp 2026-11-30 04:05:25 is 34060137.38579903 s in the future +tar: ./etc/systemd/system/timers.target.wants: time stamp 2026-11-30 04:05:37 is 34060149.38578687 s in the future +tar: ./etc/systemd/system: time stamp 2026-11-30 04:05:25 is 34060137.38577875 s in the future +tar: ./etc/alternatives: time stamp 2026-11-30 04:05:44 is 34060156.38576755 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem @@ -22,53 +2562,85 @@ dpkg-source: info: unpacking golang-github-brentp-irelate_0.0.1+ds-2.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1251201/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 31 08:56 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='4d0736f1de474875b52113ff4a217282' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1251201' - PS1='# ' - PS2='> ' + INVOCATION_ID=155b58a00f424b508d06c37a149b955e + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3555789 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_Kz09 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1 --logfile b1/build.log golang-github-brentp-irelate_0.0.1+ds-2.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/pbuilderrc_vOoM --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2 --logfile b2/build.log golang-github-brentp-irelate_0.0.1+ds-2.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1251201/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -204,7 +2776,7 @@ Get: 82 http://deb.debian.org/debian unstable/main arm64 libhts3t64 arm64 1.22.1+ds2-1 [434 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5+20250216-2 [96.1 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 samtools arm64 1.22.1-1 [666 kB] -Fetched 77.2 MB in 1s (110 MB/s) +Fetched 77.2 MB in 0s (162 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) @@ -561,7 +3133,11 @@ Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-brentp-irelate_0.0.1+ds-2_source.changes +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../golang-github-brentp-irelate_0.0.1+ds-2_source.changes dpkg-buildpackage: info: source package golang-github-brentp-irelate dpkg-buildpackage: info: source version 0.0.1+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -588,85 +3164,85 @@ make[1]: Leaving directory '/build/reproducible-path/golang-github-brentp-irelate-0.0.1+ds' dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 12 github.com/brentp/irelate github.com/brentp/irelate/interfaces github.com/brentp/irelate/main github.com/brentp/irelate/parsers -internal/unsafeheader internal/byteorder +internal/asan +math/bits internal/profilerecord internal/goos internal/coverage/rtcov -internal/goarch -internal/goexperiment +internal/cpu +internal/unsafeheader internal/godebugs -internal/asan +internal/goexperiment internal/msan -math/bits +internal/goarch +internal/runtime/syscall cmp +unicode/utf8 internal/itoa -internal/cpu -internal/abi -internal/runtime/syscall sync/atomic -internal/runtime/math -unicode/utf8 -unicode log/internal -internal/chacha8rand +unicode math +internal/chacha8rand +internal/runtime/math +internal/abi internal/bytealg internal/runtime/atomic internal/runtime/sys -internal/runtime/exithook internal/stringslite +internal/runtime/exithook internal/race -internal/runtime/maps internal/sync +internal/runtime/maps runtime iter internal/reflectlite -sync weak +sync maps slices sort errors -strconv internal/oserror path io +strconv internal/bisect -internal/testlog unique +internal/testlog syscall -internal/godebug -container/heap +bytes strings hash -bytes +internal/godebug +container/heap hash/crc32 -github.com/brentp/irelate/interfaces net/netip -regexp/syntax reflect bufio +regexp/syntax +github.com/brentp/irelate/interfaces +regexp time -internal/syscall/unix internal/syscall/execenv -regexp -io/fs -context +internal/syscall/unix internal/poll +context +io/fs internal/filepathlite -os -encoding/binary internal/fmtsort +encoding/binary +os os/signal fmt encoding/hex -net/url -encoding/csv -log compress/flate +net/url github.com/pkg/errors text/tabwriter +encoding/csv +log github.com/brentp/vcfgo compress/gzip github.com/biogo/hts/bgzf @@ -690,14 +3266,14 @@ === RUN TestIntervalLine --- PASS: TestIntervalLine (0.00s) PASS -ok github.com/brentp/irelate 0.016s +ok github.com/brentp/irelate 0.004s ? github.com/brentp/irelate/interfaces [no test files] ? github.com/brentp/irelate/main [no test files] === RUN Test OK: 1 passed ---- PASS: Test (0.02s) +--- PASS: Test (0.01s) PASS -ok github.com/brentp/irelate/parsers 0.040s +ok github.com/brentp/irelate/parsers 0.021s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang @@ -727,12 +3303,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3555789/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1251201 and its subdirectories -I: Current time: Thu Oct 30 20:56:16 -12 2025 -I: pbuilder-time-stamp: 1761900976 +I: removing directory /srv/workspace/pbuilder/3555789 and its subdirectories +I: Current time: Fri Oct 31 22:57:19 +14 2025 +I: pbuilder-time-stamp: 1761901039 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/golang-github-brentp-irelate_0.0.1+ds-2.diff: 89.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/golang-github-brentp-irelate_0.0.1+ds-2.diff.gz b2/build.log: 88.7% -- replaced with stdout Compressing the 1st log... b1/build.log: 80.0% -- replaced with stdout Fri Oct 31 08:57:22 UTC 2025 I: diffoscope 306 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_golang-github-brentp-irelate_unstable_arm64_1761901042 + touch /var/log/reproducible-builds/diffoscope_stamp_golang-github-brentp-irelate_unstable_arm64_1761901042 + RESULT=0 + systemd-run '--description=diffoscope on golang-github-brentp-irelate/0.0.1+ds-2 in unstable/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_9-105473 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ --run-session -c jenkins-reproducible-unstable-diffoscope-a58c108a-e696-452c-a1a0-d3cbfdc947a8 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/dbd-tmp-MyIk8Lx ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/golang-github-brentp-irelate_0.0.1+ds-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/golang-github-brentp-irelate_0.0.1+ds-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/golang-github-brentp-irelate_0.0.1+ds-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1/golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2/golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_9-105473.service; invocation ID: 04910c2650014ffb919f244b82cdc1f0 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/golang-github-brentp-irelate_0.0.1+ds-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/golang-github-brentp-irelate_0.0.1+ds-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/golang-github-brentp-irelate_0.0.1+ds-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b1/golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.814KZyqZ/b2/golang-github-brentp-irelate_0.0.1+ds-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 206ms CPU time consumed: 173ms Memory peak: 17.8M (swap: 0B) _ _ _ _ _ __ _ ___ | | __ _ _ __ __ _ __ _(_) |_| |__ _ _| |__ / _` |/ _ \| |/ _` | '_ \ / _` |_____ / _` | | __| '_ \| | | | '_ \ _____ | (_| | (_) | | (_| | | | | (_| |_____| (_| | | |_| | | | |_| | |_) |_____| \__, |\___/|_|\__,_|_| |_|\__, | \__, |_|\__|_| |_|\__,_|_.__/ |___/ |___/ |___/ _ _ _ _ _ | |__ _ __ ___ _ __ | |_ _ __ (_)_ __ ___| | __ _| |_ ___ | '_ \| '__/ _ \ '_ \| __| '_ \ _____| | '__/ _ \ |/ _` | __/ _ \ | |_) | | | __/ | | | |_| |_) |_____| | | | __/ | (_| | || __/ |_.__/|_| \___|_| |_|\__| .__/ |_|_| \___|_|\__,_|\__\___| |_| Fri Oct 31 08:57:22 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Fri Oct 31 08:57:22 UTC 2025 I: golang-github-brentp-irelate from unstable built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-10-31 08:57:23] INFO: Starting at 2025-10-31 08:57:23.282871 [2025-10-31 08:57:23] INFO: Generating the pages of 1 package(s) [2025-10-31 08:57:23] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/arm64/golang-github-brentp-irelate didn't produce a buildlog, even though it has been built. [2025-10-31 08:57:23] INFO: Finished at 2025-10-31 08:57:23.517790, took: 0:00:00.234922 Fri Oct 31 08:57:23 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/arm64/golang-github-brentp-irelate.html Fri Oct 31 08:57:23 UTC 2025 I: Removing signed golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc files: removed './b1/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc' removed './b2/golang-github-brentp-irelate_0.0.1+ds-2_arm64.buildinfo.asc' 1761901043 arm64 unstable golang-github-brentp-irelate Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/golang-github-brentp-irelate_0.0.1+ds-2.rbuild.log: 77.7% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/golang-github-brentp-irelate_0.0.1+ds-2.rbuild.log.gz [2025-10-31 08:57:23] INFO: Starting at 2025-10-31 08:57:23.842124 [2025-10-31 08:57:23] INFO: Generating the pages of 1 package(s) [2025-10-31 08:57:24] INFO: Finished at 2025-10-31 08:57:24.069198, took: 0:00:00.227078 All cleanup done. Fri Oct 31 08:57:24 UTC 2025 - total duration: 0h 4m 3s. Fri Oct 31 08:57:24 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-M1Eg6iNL, removing. Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 4min 5.062s CPU time consumed: 3.300s Memory peak: 49.1M (swap: 0B)