Running as unit: rb-build-arm64_9-47337.service ==================================================================================== Fri Nov 22 06:41:57 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_9) on jenkins, called using "codethink03-arm64 codethink02-arm64" as arguments. Fri Nov 22 06:41:57 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-Iqd81Qb4" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 06:41:57 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Nov 22 06:41:57 UTC 2024 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-0NywmG' Fri Nov 22 06:41:58 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Fri Nov 22 06:41:58 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-beBQ4E' ok, let's check if libbiosoup-dev is building anywhere yet… ok, libbiosoup-dev is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of libbiosoup-dev in unstable on arm64 on jenkins now. 1st build will be done on codethink03-arm64.debian.net. 2nd build will be done on codethink02-arm64.debian.net. ============================================================================= Fri Nov 22 06:42:17 UTC 2024 I: starting to build libbiosoup-dev/unstable/arm64 on jenkins on '2024-11-22 06:41' Fri Nov 22 06:42:17 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_9/47337/console.log 1732257737 arm64 unstable libbiosoup-dev Fri Nov 22 06:42:17 UTC 2024 I: Downloading source for unstable/libbiosoup-dev=0.11.0-2 --2024-11-22 06:42:17-- http://deb.debian.org/debian/pool/main/libb/libbiosoup-dev/libbiosoup-dev_0.11.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2005 (2.0K) [text/prs.lines.tag] Saving to: ‘libbiosoup-dev_0.11.0-2.dsc’ 0K . 100% 232M=0s 2024-11-22 06:42:17 (232 MB/s) - ‘libbiosoup-dev_0.11.0-2.dsc’ saved [2005/2005] --2024-11-22 06:42:17-- http://deb.debian.org/debian/pool/main/libb/libbiosoup-dev/libbiosoup-dev_0.11.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2005 (2.0K) [text/prs.lines.tag] Saving to: ‘libbiosoup-dev_0.11.0-2.dsc’ 0K . 100% 232M=0s 2024-11-22 06:42:17 (232 MB/s) - ‘libbiosoup-dev_0.11.0-2.dsc’ saved [2005/2005] Fri Nov 22 06:42:17 UTC 2024 I: libbiosoup-dev_0.11.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbiosoup-dev Binary: libbiosoup-dev Architecture: all Version: 0.11.0-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/rvaser/biosoup/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/libbiosoup-dev Vcs-Git: https://salsa.debian.org/med-team/libbiosoup-dev.git Build-Depends: debhelper-compat (= 13), cmake, libgtest-dev Package-List: libbiosoup-dev deb libdevel optional arch=all Checksums-Sha1: bf84d26256c185a03fe77a843d57991c16adeb26 8555 libbiosoup-dev_0.11.0.orig.tar.gz 4a107c7ebf6bb65a160a17799468f5a3856a2511 2408 libbiosoup-dev_0.11.0-2.debian.tar.xz Checksums-Sha256: e4addc3965ca9291535a131c07ef958a98e779ef1375d38d354536df66e16cd4 8555 libbiosoup-dev_0.11.0.orig.tar.gz f83a2a01d21c9f86d7939d2520652091d14082079249c3025b2e545504fc2ead 2408 libbiosoup-dev_0.11.0-2.debian.tar.xz Files: 8c87f837488ac075d78be0f473e2f9f7 8555 libbiosoup-dev_0.11.0.orig.tar.gz 37451bee1f61af33da4f98b7b79e4f6f 2408 libbiosoup-dev_0.11.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmX9rJkACgkQPCZ2P2xn 5uI42w/+KI9ropwKLot+xkGXtaxcDYoIHlnaGA1aYkkabKsw72h4Pqa3grKW6NXx t3yCee2eMClgtXg49rTMRdTwH+BqG2D6VfUKLmCP12m1oTRC7B2aa2bWICDUPFGL Y1ZeyLKEMED8OIFYavNXZcQ5Wt0QpgvnM+RDVulbU1fDRHfbYOFOccQkEyMJanNu CXfOCdjOad7vRc13Nu5baNkREjdKXacgJ+rWRF08R0D8ApIXPDcW7CqajFdfRs53 qiwhCC+qX1rWagPPdBFsg6CGXxQYpkKcA4p0ar9L4ThnN1IkCWwmgJwq5xGX83Do +3lkYt3H/vY/LSpxCS2v0+sUaXNncr06njngxPlaCHNj7nhpnvhjRYsKpTb6DzxI DDchS/n4vRjiVmTcLR9Mr+sN1CNAgzEfo8nhNXHUNFlu+btBfU0AFY+fZRWRgWeU sdohZWBDj8JuSIQyCzSCFBF2fuf6mJB1pF8nr+DZ+A1yFbnQ7H/StZ1bhQbS7xF+ RvUhZ94OHw+qF4N/pNoe0FQnS0tjQmQInmaRvqdoEfA/VPNZ4/JzqdhveF/PybXp rcyXD2TRH7Gx0O0/lnhuJrSgwGEod9YgQtxhtYeVcXZvaWF46uSracMjZsBzDlLQ fxhFmd4CLrqVvyAAjg89sD7je1xWwt1LHd0yU+CJzbjcM541Nvo= =n9Jl -----END PGP SIGNATURE----- Fri Nov 22 06:42:17 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 06:42:17 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Fri Nov 22 06:42:17 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Fri Nov 22 06:42:17 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Nov 22 06:42:17 UTC 2024 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-woXaRu' ==================================================================================== Thu Dec 25 13:05:19 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "1 libbiosoup-dev unstable /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB 0.11.0-2" as arguments. Thu Dec 25 13:05:19 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-cMGTVFrs" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Dec 25 13:05:19 UTC 2025 I: Downloading source for unstable/libbiosoup-dev=0.11.0-2 Reading package lists... NOTICE: 'libbiosoup-dev' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbiosoup-dev.git Please use: git clone https://salsa.debian.org/med-team/libbiosoup-dev.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 13.0 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (dsc) [2005 B] Get:2 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (tar) [8555 B] Get:3 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (diff) [2408 B] Fetched 13.0 kB in 0s (76.7 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libbiosoup-dev' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbiosoup-dev.git Please use: git clone https://salsa.debian.org/med-team/libbiosoup-dev.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 13.0 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (dsc) [2005 B] Get:2 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (tar) [8555 B] Get:3 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (diff) [2408 B] Fetched 13.0 kB in 0s (76.7 kB/s) Download complete and in download only mode ============================================================================= Building libbiosoup-dev in unstable on arm64 on codethink03-arm64 now. Date: Thu Dec 25 13:05:19 GMT 2025 Date UTC: Thu Dec 25 13:05:19 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 01:05:19 -12 2025 I: pbuilder-time-stamp: 1766667919 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbiosoup-dev_0.11.0-2.dsc] I: copying [./libbiosoup-dev_0.11.0.orig.tar.gz] I: copying [./libbiosoup-dev_0.11.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Mar 22 16:06:49 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbiosoup-dev_0.11.0-2.dsc: no acceptable signature found dpkg-source: info: extracting libbiosoup-dev in libbiosoup-dev-0.11.0 dpkg-source: info: unpacking libbiosoup-dev_0.11.0.orig.tar.gz dpkg-source: info: unpacking libbiosoup-dev_0.11.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1638263/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='7ee2e7ee39b14ea98c0c0bf69101fa5e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1638263' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_ED4E --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1 --logfile b1/build.log libbiosoup-dev_0.11.0-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1638263/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgtest-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 35.9 MB of archives. After unpacking 143 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.0-2 [2265 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 27 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.0-2 [9873 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 googletest all 1.15.2-1 [514 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libgtest-dev arm64 1.15.2-1 [245 kB] Fetched 35.9 MB in 0s (183 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_arm64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... 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Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up cmake-data (3.31.0-2) ... Setting up librhash1:arm64 (1.4.5-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libgtest-dev:arm64 (1.15.2-1) ... Setting up libtool (2.4.7-8) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libbiosoup-dev-0.11.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbiosoup-dev_0.11.0-2_source.changes dpkg-buildpackage: info: source package libbiosoup-dev dpkg-buildpackage: info: source version 0.11.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_auto_configure -- -Dbiosoup_build_tests=ON -Dbiosoup_install=ON -DCMAKE_INSTALL_LIBDIR=lib cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -Dbiosoup_build_tests=ON -Dbiosoup_install=ON -DCMAKE_INSTALL_LIBDIR=lib .. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_auto_build cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbiosoup-dev-0.11.0 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/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles/biosoup_test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make -f CMakeFiles/biosoup_test.dir/build.make CMakeFiles/biosoup_test.dir/build make[3]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' [ 16%] Building CXX object CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/progress_bar_test.cpp [ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o [ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o [ 66%] Building CXX object CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o [ 83%] Building CXX object CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/nucleic_acid_test.cpp /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/sequence_test.cpp /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/overlap_test.cpp /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/timer_test.cpp [100%] Linking CXX executable bin/biosoup_test /usr/bin/cmake -E cmake_link_script CMakeFiles/biosoup_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/biosoup_test.dir/link.d CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -o bin/biosoup_test /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' [100%] Built target biosoup_test make[2]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' obj-*/bin/biosoup_test Running main() from ./googletest/src/gtest_main.cc [==========] Running 11 tests from 5 test suites. [----------] Global test environment set-up. [----------] 4 tests from BiosoupNucleicAcidTest [ RUN ] BiosoupNucleicAcidTest.NucleotideError [ OK ] BiosoupNucleicAcidTest.NucleotideError (0 ms) [ RUN ] BiosoupNucleicAcidTest.Inflate [ OK ] BiosoupNucleicAcidTest.Inflate (0 ms) [ RUN ] BiosoupNucleicAcidTest.Quality [ OK ] BiosoupNucleicAcidTest.Quality (0 ms) [ RUN ] BiosoupNucleicAcidTest.ReverseAndComplement [ OK ] BiosoupNucleicAcidTest.ReverseAndComplement (0 ms) [----------] 4 tests from BiosoupNucleicAcidTest (0 ms total) [----------] 1 test from BiosoupOverlapTest [ RUN ] BiosoupOverlapTest.Compile [ OK ] BiosoupOverlapTest.Compile (0 ms) [----------] 1 test from BiosoupOverlapTest (0 ms total) [----------] 1 test from BiosoupProgressBarTest [ RUN ] BiosoupProgressBarTest.Operator [ OK ] BiosoupProgressBarTest.Operator (0 ms) [----------] 1 test from BiosoupProgressBarTest (0 ms total) [----------] 1 test from BiosoupSequenceTest [ RUN ] BiosoupSequenceTest.ReverseAndComplement [ OK ] BiosoupSequenceTest.ReverseAndComplement (0 ms) [----------] 1 test from BiosoupSequenceTest (0 ms total) [----------] 4 tests from BiosoupTimerTest [ RUN ] BiosoupTimerTest.Start [ OK ] BiosoupTimerTest.Start (512 ms) [ RUN ] BiosoupTimerTest.Stop [ OK ] BiosoupTimerTest.Stop (768 ms) [ RUN ] BiosoupTimerTest.Lap [ OK ] BiosoupTimerTest.Lap (256 ms) [ RUN ] BiosoupTimerTest.Reset [ OK ] BiosoupTimerTest.Reset (768 ms) [----------] 4 tests from BiosoupTimerTest (2304 ms total) [----------] Global test environment tear-down [==========] 11 tests from 5 test suites ran. (2305 ms total) [ PASSED ] 11 tests. make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbiosoup-dev/ cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbiosoup-dev-0.11.0 -B/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/timer.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/sequence.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/progress_bar.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/overlap.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/nucleic_acid.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupTargets.cmake -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupConfig.cmake -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupConfigVersion.cmake make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' dh_install debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbiosoup-dev' in '../libbiosoup-dev_0.11.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../libbiosoup-dev_0.11.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../libbiosoup-dev_0.11.0-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1638263 and its subdirectories I: Current time: Thu Dec 25 01:05:55 -12 2025 I: pbuilder-time-stamp: 1766667955 Thu Dec 25 13:05:55 UTC 2025 I: Signing ./b1/libbiosoup-dev_0.11.0-2_arm64.buildinfo as libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc Thu Dec 25 13:05:55 UTC 2025 I: Signed ./b1/libbiosoup-dev_0.11.0-2_arm64.buildinfo as ./b1/libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc Thu Dec 25 13:05:55 UTC 2025 - build #1 for libbiosoup-dev/unstable/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Thu Dec 25 13:05:55 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-cMGTVFrs, removing. /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 06:42 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 06:42 b2 -rw-r--r-- 1 jenkins jenkins 2005 Mar 22 2024 libbiosoup-dev_0.11.0-2.dsc -rw------- 1 jenkins jenkins 3171 Nov 22 06:42 rbuildlog.ZT4aDgd /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1: total 80 -rw-r--r-- 1 jenkins jenkins 38143 Nov 22 06:42 build.log -rw-r--r-- 1 jenkins jenkins 2408 Nov 22 06:42 libbiosoup-dev_0.11.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2005 Nov 22 06:42 libbiosoup-dev_0.11.0-2.dsc -rw-r--r-- 1 jenkins jenkins 8004 Nov 22 06:42 libbiosoup-dev_0.11.0-2_all.deb -rw-r--r-- 1 jenkins jenkins 5729 Nov 22 06:42 libbiosoup-dev_0.11.0-2_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 6611 Nov 22 06:42 libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1170 Nov 22 06:42 libbiosoup-dev_0.11.0-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1337 Nov 22 06:42 libbiosoup-dev_0.11.0-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2: total 0 Fri Nov 22 06:42:57 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 01:05:19 -12 2025 I: pbuilder-time-stamp: 1766667919 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbiosoup-dev_0.11.0-2.dsc] I: copying [./libbiosoup-dev_0.11.0.orig.tar.gz] I: copying [./libbiosoup-dev_0.11.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Mar 22 16:06:49 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbiosoup-dev_0.11.0-2.dsc: no acceptable signature found dpkg-source: info: extracting libbiosoup-dev in libbiosoup-dev-0.11.0 dpkg-source: info: unpacking libbiosoup-dev_0.11.0.orig.tar.gz dpkg-source: info: unpacking libbiosoup-dev_0.11.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1638263/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='7ee2e7ee39b14ea98c0c0bf69101fa5e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1638263' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_ED4E --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1 --logfile b1/build.log libbiosoup-dev_0.11.0-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1638263/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgtest-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 35.9 MB of archives. After unpacking 143 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.0-2 [2265 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 27 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.0-2 [9873 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 googletest all 1.15.2-1 [514 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libgtest-dev arm64 1.15.2-1 [245 kB] Fetched 35.9 MB in 0s (183 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_arm64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... 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Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up cmake-data (3.31.0-2) ... Setting up librhash1:arm64 (1.4.5-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libgtest-dev:arm64 (1.15.2-1) ... Setting up libtool (2.4.7-8) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libbiosoup-dev-0.11.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbiosoup-dev_0.11.0-2_source.changes dpkg-buildpackage: info: source package libbiosoup-dev dpkg-buildpackage: info: source version 0.11.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_auto_configure -- -Dbiosoup_build_tests=ON -Dbiosoup_install=ON -DCMAKE_INSTALL_LIBDIR=lib cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -Dbiosoup_build_tests=ON -Dbiosoup_install=ON -DCMAKE_INSTALL_LIBDIR=lib .. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.9s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_auto_build cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbiosoup-dev-0.11.0 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/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles/biosoup_test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make -f CMakeFiles/biosoup_test.dir/build.make CMakeFiles/biosoup_test.dir/build make[3]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' [ 16%] Building CXX object CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/progress_bar_test.cpp [ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o [ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o [ 66%] Building CXX object CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o [ 83%] Building CXX object CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/nucleic_acid_test.cpp /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/sequence_test.cpp /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/overlap_test.cpp /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/timer_test.cpp [100%] Linking CXX executable bin/biosoup_test /usr/bin/cmake -E cmake_link_script CMakeFiles/biosoup_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/biosoup_test.dir/link.d CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -o bin/biosoup_test /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' [100%] Built target biosoup_test make[2]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' obj-*/bin/biosoup_test Running main() from ./googletest/src/gtest_main.cc [==========] Running 11 tests from 5 test suites. [----------] Global test environment set-up. [----------] 4 tests from BiosoupNucleicAcidTest [ RUN ] BiosoupNucleicAcidTest.NucleotideError [ OK ] BiosoupNucleicAcidTest.NucleotideError (0 ms) [ RUN ] BiosoupNucleicAcidTest.Inflate [ OK ] BiosoupNucleicAcidTest.Inflate (0 ms) [ RUN ] BiosoupNucleicAcidTest.Quality [ OK ] BiosoupNucleicAcidTest.Quality (0 ms) [ RUN ] BiosoupNucleicAcidTest.ReverseAndComplement [ OK ] BiosoupNucleicAcidTest.ReverseAndComplement (0 ms) [----------] 4 tests from BiosoupNucleicAcidTest (0 ms total) [----------] 1 test from BiosoupOverlapTest [ RUN ] BiosoupOverlapTest.Compile [ OK ] BiosoupOverlapTest.Compile (0 ms) [----------] 1 test from BiosoupOverlapTest (0 ms total) [----------] 1 test from BiosoupProgressBarTest [ RUN ] BiosoupProgressBarTest.Operator [ OK ] BiosoupProgressBarTest.Operator (0 ms) [----------] 1 test from BiosoupProgressBarTest (0 ms total) [----------] 1 test from BiosoupSequenceTest [ RUN ] BiosoupSequenceTest.ReverseAndComplement [ OK ] BiosoupSequenceTest.ReverseAndComplement (0 ms) [----------] 1 test from BiosoupSequenceTest (0 ms total) [----------] 4 tests from BiosoupTimerTest [ RUN ] BiosoupTimerTest.Start [ OK ] BiosoupTimerTest.Start (512 ms) [ RUN ] BiosoupTimerTest.Stop [ OK ] BiosoupTimerTest.Stop (768 ms) [ RUN ] BiosoupTimerTest.Lap [ OK ] BiosoupTimerTest.Lap (256 ms) [ RUN ] BiosoupTimerTest.Reset [ OK ] BiosoupTimerTest.Reset (768 ms) [----------] 4 tests from BiosoupTimerTest (2304 ms total) [----------] Global test environment tear-down [==========] 11 tests from 5 test suites ran. (2305 ms total) [ PASSED ] 11 tests. make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbiosoup-dev/ cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbiosoup-dev-0.11.0 -B/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/timer.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/sequence.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/progress_bar.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/overlap.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/nucleic_acid.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupTargets.cmake -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupConfig.cmake -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupConfigVersion.cmake make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' dh_install debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbiosoup-dev' in '../libbiosoup-dev_0.11.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../libbiosoup-dev_0.11.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../libbiosoup-dev_0.11.0-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1638263 and its subdirectories I: Current time: Thu Dec 25 01:05:55 -12 2025 I: pbuilder-time-stamp: 1766667955 Fri Nov 22 06:42:57 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink02-arm64.debian.net. Fri Nov 22 06:42:57 UTC 2024 I: Preparing to do remote build '2' on codethink02-arm64.debian.net. Fri Nov 22 06:42:57 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Fri Nov 22 06:42:57 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-wZk8B3' ==================================================================================== Fri Nov 22 06:42:59 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink02-arm64, called using "2 libbiosoup-dev unstable /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB 0.11.0-2" as arguments. Fri Nov 22 06:42:59 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-FZspYX4z" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 06:42:59 UTC 2024 I: Downloading source for unstable/libbiosoup-dev=0.11.0-2 Reading package lists... NOTICE: 'libbiosoup-dev' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbiosoup-dev.git Please use: git clone https://salsa.debian.org/med-team/libbiosoup-dev.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 13.0 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (dsc) [2005 B] Get:2 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (tar) [8555 B] Get:3 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (diff) [2408 B] Fetched 13.0 kB in 0s (1133 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libbiosoup-dev' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/libbiosoup-dev.git Please use: git clone https://salsa.debian.org/med-team/libbiosoup-dev.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 13.0 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (dsc) [2005 B] Get:2 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (tar) [8555 B] Get:3 http://deb.debian.org/debian unstable/main libbiosoup-dev 0.11.0-2 (diff) [2408 B] Fetched 13.0 kB in 0s (1133 kB/s) Download complete and in download only mode ============================================================================= Re-Building libbiosoup-dev in unstable on arm64 on codethink02-arm64 now. Date: Fri Nov 22 06:42:59 GMT 2024 Date UTC: Fri Nov 22 06:42:59 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_mf5o + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' libbiosoup-dev = debian-installer -o libbiosoup-dev = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' libbiosoup-dev = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_mf5o --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2 --logfile b2/build.log libbiosoup-dev_0.11.0-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 20:42:59 +14 2024 I: pbuilder-time-stamp: 1732257780 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbiosoup-dev_0.11.0-2.dsc] I: copying [./libbiosoup-dev_0.11.0.orig.tar.gz] I: copying [./libbiosoup-dev_0.11.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Mar 22 16:06:49 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbiosoup-dev_0.11.0-2.dsc: no acceptable signature found dpkg-source: info: extracting libbiosoup-dev in libbiosoup-dev-0.11.0 dpkg-source: info: unpacking libbiosoup-dev_0.11.0.orig.tar.gz dpkg-source: info: unpacking libbiosoup-dev_0.11.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D01_modify_environment starting debug: Running on codethink02-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 22 06:43 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=82a573f8e46746b1a3ef40c9d583259a LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=2921073 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_mf5o --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2 --logfile b2/build.log libbiosoup-dev_0.11.0-2.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgtest-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 35.9 MB of archives. After unpacking 143 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.0-2 [2265 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 27 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.0-2 [9873 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 googletest all 1.15.2-1 [514 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libgtest-dev arm64 1.15.2-1 [245 kB] Fetched 35.9 MB in 1s (68.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_arm64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... 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Unpacking libbrotli1:arm64 (1.1.0-2+b6) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../22-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../23-libcom-err2_1.47.1-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../24-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../25-libkeyutils1_1.6.3-4_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../26-libkrb5-3_1.21.3-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:arm64 (1.1.0-2+b6) ... Setting up libuv1t64:arm64 (1.48.0-7) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:arm64 (1.64.0-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:arm64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up googletest (1.15.2-1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Setting up autotools-dev (20220109.1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libjsoncpp26:arm64 (1.9.6-3) ... Setting up libproc2-0:arm64 (2:4.0.4-6) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up cmake-data (3.31.0-2) ... Setting up librhash1:arm64 (1.4.5-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libgtest-dev:arm64 (1.15.2-1) ... Setting up libtool (2.4.7-8) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libarchive13t64:arm64 (3.7.4-1.1) ... Setting up libcurl4t64:arm64 (8.11.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up cmake (3.31.0-2) ... Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/libbiosoup-dev-0.11.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbiosoup-dev_0.11.0-2_source.changes dpkg-buildpackage: info: source package libbiosoup-dev dpkg-buildpackage: info: source version 0.11.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_auto_configure -- -Dbiosoup_build_tests=ON -Dbiosoup_install=ON -DCMAKE_INSTALL_LIBDIR=lib cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -Dbiosoup_build_tests=ON -Dbiosoup_install=ON -DCMAKE_INSTALL_LIBDIR=lib .. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (1.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_auto_build cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbiosoup-dev-0.11.0 -B/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make -f CMakeFiles/biosoup_test.dir/build.make CMakeFiles/biosoup_test.dir/depend make[3]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' cd /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libbiosoup-dev-0.11.0 /build/reproducible-path/libbiosoup-dev-0.11.0 /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles/biosoup_test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make -f CMakeFiles/biosoup_test.dir/build.make CMakeFiles/biosoup_test.dir/build make[3]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' [ 16%] Building CXX object CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/nucleic_acid_test.cpp [ 33%] Building CXX object CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/overlap_test.cpp [ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/progress_bar_test.cpp [ 66%] Building CXX object CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/sequence_test.cpp [ 83%] Building CXX object CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/timer_test.cpp [100%] Linking CXX executable bin/biosoup_test /usr/bin/cmake -E cmake_link_script CMakeFiles/biosoup_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/biosoup_test.dir/link.d CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -o bin/biosoup_test /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' [100%] Built target biosoup_test make[2]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' obj-*/bin/biosoup_test Running main() from ./googletest/src/gtest_main.cc [==========] Running 11 tests from 5 test suites. [----------] Global test environment set-up. [----------] 4 tests from BiosoupNucleicAcidTest [ RUN ] BiosoupNucleicAcidTest.NucleotideError [ OK ] BiosoupNucleicAcidTest.NucleotideError (0 ms) [ RUN ] BiosoupNucleicAcidTest.Inflate [ OK ] BiosoupNucleicAcidTest.Inflate (0 ms) [ RUN ] BiosoupNucleicAcidTest.Quality [ OK ] BiosoupNucleicAcidTest.Quality (0 ms) [ RUN ] BiosoupNucleicAcidTest.ReverseAndComplement [ OK ] BiosoupNucleicAcidTest.ReverseAndComplement (0 ms) [----------] 4 tests from BiosoupNucleicAcidTest (0 ms total) [----------] 1 test from BiosoupOverlapTest [ RUN ] BiosoupOverlapTest.Compile [ OK ] BiosoupOverlapTest.Compile (0 ms) [----------] 1 test from BiosoupOverlapTest (0 ms total) [----------] 1 test from BiosoupProgressBarTest [ RUN ] BiosoupProgressBarTest.Operator [ OK ] BiosoupProgressBarTest.Operator (0 ms) [----------] 1 test from BiosoupProgressBarTest (0 ms total) [----------] 1 test from BiosoupSequenceTest [ RUN ] BiosoupSequenceTest.ReverseAndComplement [ OK ] BiosoupSequenceTest.ReverseAndComplement (0 ms) [----------] 1 test from BiosoupSequenceTest (0 ms total) [----------] 4 tests from BiosoupTimerTest [ RUN ] BiosoupTimerTest.Start [ OK ] BiosoupTimerTest.Start (518 ms) [ RUN ] BiosoupTimerTest.Stop [ OK ] BiosoupTimerTest.Stop (783 ms) [ RUN ] BiosoupTimerTest.Lap [ OK ] BiosoupTimerTest.Lap (259 ms) [ RUN ] BiosoupTimerTest.Reset [ OK ] BiosoupTimerTest.Reset (779 ms) [----------] 4 tests from BiosoupTimerTest (2342 ms total) [----------] Global test environment tear-down [==========] 11 tests from 5 test suites ran. (2348 ms total) [ PASSED ] 11 tests. make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbiosoup-dev/ cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libbiosoup-dev-0.11.0 -B/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/timer.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/sequence.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/progress_bar.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/overlap.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/include/biosoup/nucleic_acid.hpp -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupTargets.cmake -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupConfig.cmake -- Installing: /build/reproducible-path/libbiosoup-dev-0.11.0/debian/libbiosoup-dev/usr/lib/cmake/biosoup/biosoupConfigVersion.cmake make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' dh_install debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbiosoup-dev' in '../libbiosoup-dev_0.11.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../libbiosoup-dev_0.11.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../libbiosoup-dev_0.11.0-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2921073 and its subdirectories I: Current time: Fri Nov 22 20:44:22 +14 2024 I: pbuilder-time-stamp: 1732257862 + false + set +x Fri Nov 22 06:44:22 UTC 2024 I: Signing ./b2/libbiosoup-dev_0.11.0-2_arm64.buildinfo as libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc Fri Nov 22 06:44:22 UTC 2024 I: Signed ./b2/libbiosoup-dev_0.11.0-2_arm64.buildinfo as ./b2/libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc Fri Nov 22 06:44:22 UTC 2024 - build #2 for libbiosoup-dev/unstable/arm64 on codethink02-arm64 done. Starting cleanup. All cleanup done. Fri Nov 22 06:44:22 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-FZspYX4z, removing. /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB: total 56 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 06:42 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 06:44 b2 -rw-r--r-- 1 jenkins jenkins 2005 Mar 22 2024 libbiosoup-dev_0.11.0-2.dsc -rw------- 1 jenkins jenkins 41615 Nov 22 06:42 rbuildlog.ZT4aDgd /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1: total 80 -rw-r--r-- 1 jenkins jenkins 38143 Nov 22 06:42 build.log -rw-r--r-- 1 jenkins jenkins 2408 Nov 22 06:42 libbiosoup-dev_0.11.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2005 Nov 22 06:42 libbiosoup-dev_0.11.0-2.dsc -rw-r--r-- 1 jenkins jenkins 8004 Nov 22 06:42 libbiosoup-dev_0.11.0-2_all.deb -rw-r--r-- 1 jenkins jenkins 5729 Nov 22 06:42 libbiosoup-dev_0.11.0-2_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 6611 Nov 22 06:42 libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1170 Nov 22 06:42 libbiosoup-dev_0.11.0-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1337 Nov 22 06:42 libbiosoup-dev_0.11.0-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2: total 80 -rw-r--r-- 1 jenkins jenkins 40089 Nov 22 06:44 build.log -rw-r--r-- 1 jenkins jenkins 2408 Nov 22 06:44 libbiosoup-dev_0.11.0-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2005 Nov 22 06:44 libbiosoup-dev_0.11.0-2.dsc -rw-r--r-- 1 jenkins jenkins 8004 Nov 22 06:44 libbiosoup-dev_0.11.0-2_all.deb -rw-r--r-- 1 jenkins jenkins 5729 Nov 22 06:44 libbiosoup-dev_0.11.0-2_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 6611 Nov 22 06:44 libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1170 Nov 22 06:44 libbiosoup-dev_0.11.0-2_arm64.changes -rw-r--r-- 1 jenkins jenkins 1337 Nov 22 06:44 libbiosoup-dev_0.11.0-2_source.changes Fri Nov 22 06:44:23 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. Fri Nov 22 06:44:24 UTC 2024 I: libbiosoup-dev_0.11.0-2_arm64.changes: Format: 1.8 Date: Fri, 22 Mar 2024 17:06:39 +0100 Source: libbiosoup-dev Binary: libbiosoup-dev Architecture: all Version: 0.11.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libbiosoup-dev - C++ header-only support library for bioinformatics tools Closes: 1067500 Changes: libbiosoup-dev (0.11.0-2) unstable; urgency=medium . * d/rules: Don't install the Meson build file into /usr/include. Closes: #1067500 Checksums-Sha1: 27aa407090f2edf7d2b43213cb94ffc0a15b6193 8004 libbiosoup-dev_0.11.0-2_all.deb 6771a220497eae530d62e5df62d6094d3ac39430 5729 libbiosoup-dev_0.11.0-2_arm64.buildinfo Checksums-Sha256: c11f676c60af1e441b0b8eb51086a43fec77d1327790661d5b46ec3092697b0c 8004 libbiosoup-dev_0.11.0-2_all.deb a4603c4986cef8540e687531d4c75ddcaa169a4c949ce15bd163e2b658cc29df 5729 libbiosoup-dev_0.11.0-2_arm64.buildinfo Files: ede55891afde85606b92540a47d9f871 8004 libdevel optional libbiosoup-dev_0.11.0-2_all.deb a0b117f7775925f26ecd3912386b0064 5729 science optional libbiosoup-dev_0.11.0-2_arm64.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/libbiosoup-dev_0.11.0-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/libbiosoup-dev_0.11.0-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/libbiosoup-dev_0.11.0-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/libbiosoup-dev_0.11.0-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/arm64/libbiosoup-dev_0.11.0-2_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/libbiosoup-dev_0.11.0-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-22 06:42:56.938581666 +0000 +++ b2/build.log 2024-11-22 06:44:23.198712122 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 25 01:05:19 -12 2025 -I: pbuilder-time-stamp: 1766667919 +I: Current time: Fri Nov 22 20:42:59 +14 2024 +I: pbuilder-time-stamp: 1732257780 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: unpacking libbiosoup-dev_0.11.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1638263/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 22 06:43 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='7ee2e7ee39b14ea98c0c0bf69101fa5e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1638263' - PS1='# ' - PS2='> ' + INVOCATION_ID=82a573f8e46746b1a3ef40c9d583259a + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2921073 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_ED4E --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1 --logfile b1/build.log libbiosoup-dev_0.11.0-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/pbuilderrc_mf5o --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2 --logfile b2/build.log libbiosoup-dev_0.11.0-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/1638263/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -165,7 +197,7 @@ Get: 53 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 googletest all 1.15.2-1 [514 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libgtest-dev arm64 1.15.2-1 [245 kB] -Fetched 35.9 MB in 0s (183 MB/s) +Fetched 35.9 MB in 1s (68.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) @@ -400,7 +432,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/libbiosoup-dev-0.11.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbiosoup-dev_0.11.0-2_source.changes +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libbiosoup-dev-0.11.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libbiosoup-dev_0.11.0-2_source.changes dpkg-buildpackage: info: source package libbiosoup-dev dpkg-buildpackage: info: source version 0.11.0-2 dpkg-buildpackage: info: source distribution unstable @@ -424,7 +460,7 @@ -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done --- Configuring done (0.9s) +-- Configuring done (1.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -449,15 +485,15 @@ make[3]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' make -f CMakeFiles/biosoup_test.dir/build.make CMakeFiles/biosoup_test.dir/build make[3]: Entering directory '/build/reproducible-path/libbiosoup-dev-0.11.0/obj-aarch64-linux-gnu' -[ 16%] Building CXX object CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -/usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/progress_bar_test.cpp -[ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -[ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -[ 66%] Building CXX object CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -[ 83%] Building CXX object CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o +[ 16%] Building CXX object CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/nucleic_acid_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/nucleic_acid_test.cpp -/usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/sequence_test.cpp +[ 33%] Building CXX object CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/overlap_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/overlap_test.cpp +[ 50%] Building CXX object CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o +/usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/progress_bar_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/progress_bar_test.cpp +[ 66%] Building CXX object CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o +/usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/sequence_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/sequence_test.cpp +[ 83%] Building CXX object CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o /usr/bin/c++ -I/build/reproducible-path/libbiosoup-dev-0.11.0/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libbiosoup-dev-0.11.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -MF CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o.d -o CMakeFiles/biosoup_test.dir/test/timer_test.cpp.o -c /build/reproducible-path/libbiosoup-dev-0.11.0/test/timer_test.cpp [100%] Linking CXX executable bin/biosoup_test /usr/bin/cmake -E cmake_link_script CMakeFiles/biosoup_test.dir/link.txt --verbose=1 @@ -501,17 +537,17 @@ [----------] 4 tests from BiosoupTimerTest [ RUN ] BiosoupTimerTest.Start -[ OK ] BiosoupTimerTest.Start (512 ms) +[ OK ] BiosoupTimerTest.Start (518 ms) [ RUN ] BiosoupTimerTest.Stop -[ OK ] BiosoupTimerTest.Stop (768 ms) +[ OK ] BiosoupTimerTest.Stop (783 ms) [ RUN ] BiosoupTimerTest.Lap -[ OK ] BiosoupTimerTest.Lap (256 ms) +[ OK ] BiosoupTimerTest.Lap (259 ms) [ RUN ] BiosoupTimerTest.Reset -[ OK ] BiosoupTimerTest.Reset (768 ms) -[----------] 4 tests from BiosoupTimerTest (2304 ms total) +[ OK ] BiosoupTimerTest.Reset (779 ms) +[----------] 4 tests from BiosoupTimerTest (2342 ms total) [----------] Global test environment tear-down -[==========] 11 tests from 5 test suites ran. (2305 ms total) +[==========] 11 tests from 5 test suites ran. (2348 ms total) [ PASSED ] 11 tests. make[1]: Leaving directory '/build/reproducible-path/libbiosoup-dev-0.11.0' create-stamp debian/debhelper-build-stamp @@ -562,12 +598,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2921073/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1638263 and its subdirectories -I: Current time: Thu Dec 25 01:05:55 -12 2025 -I: pbuilder-time-stamp: 1766667955 +I: removing directory /srv/workspace/pbuilder/2921073 and its subdirectories +I: Current time: Fri Nov 22 20:44:22 +14 2024 +I: pbuilder-time-stamp: 1732257862 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/libbiosoup-dev_0.11.0-2.diff: 75.1% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/libbiosoup-dev_0.11.0-2.diff.gz b2/build.log: 79.0% -- replaced with stdout Compressing the 1st log... b1/build.log: 79.5% -- replaced with stdout Fri Nov 22 06:44:25 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_libbiosoup-dev_unstable_arm64_1732257865 + touch /var/log/reproducible-builds/diffoscope_stamp_libbiosoup-dev_unstable_arm64_1732257865 + RESULT=0 + systemd-run '--description=diffoscope on libbiosoup-dev/0.11.0-2 in unstable/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_9-47337 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB --run-session -c jenkins-reproducible-unstable-diffoscope-f9f899ff-5008-41de-9f36-882e28fd6fc5 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/dbd-tmp-CyXydng ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/libbiosoup-dev_0.11.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/libbiosoup-dev_0.11.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/libbiosoup-dev_0.11.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1/libbiosoup-dev_0.11.0-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2/libbiosoup-dev_0.11.0-2_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_9-47337.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/libbiosoup-dev_0.11.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/libbiosoup-dev_0.11.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/libbiosoup-dev_0.11.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b1/libbiosoup-dev_0.11.0-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.6E0giigB/b2/libbiosoup-dev_0.11.0-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.347s) 0.347s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.014s) 0.014s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 663ms CPU time consumed: 659ms _ _ _ _ _ _ | (_) |__ | |__ (_) ___ ___ ___ _ _ _ __ __| | _____ __ | | | '_ \| '_ \| |/ _ \/ __|/ _ \| | | | '_ \ _____ / _` |/ _ \ \ / / | | | |_) | |_) | | (_) \__ \ (_) | |_| | |_) |_____| (_| | __/\ V / |_|_|_.__/|_.__/|_|\___/|___/\___/ \__,_| .__/ \__,_|\___| \_/ |_| Fri Nov 22 06:44:26 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Fri Nov 22 06:44:26 UTC 2024 I: libbiosoup-dev from unstable built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-22 06:44:26] INFO: Starting at 2024-11-22 06:44:26.809969 [2024-11-22 06:44:26] INFO: Generating the pages of 1 package(s) [2024-11-22 06:44:26] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/arm64/libbiosoup-dev didn't produce a buildlog, even though it has been built. [2024-11-22 06:44:27] INFO: Finished at 2024-11-22 06:44:27.069771, took: 0:00:00.259810 Fri Nov 22 06:44:27 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/arm64/libbiosoup-dev.html Fri Nov 22 06:44:27 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Nov 22 06:44:27 UTC 2024 I: Submitting 8.0K b1/libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc https://buildinfo.debian.net/6771a220497eae530d62e5df62d6094d3ac39430/libbiosoup-dev_0.11.0-2_all Fri Nov 22 06:44:27 UTC 2024 I: Submitting 8.0K b2/libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc https://buildinfo.debian.net/aff96c24d1a5585d1533f0ba5de06f7024f9fe09/libbiosoup-dev_0.11.0-2_all Fri Nov 22 06:44:28 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Nov 22 06:44:28 UTC 2024 I: Done submitting .buildinfo files. Fri Nov 22 06:44:28 UTC 2024 I: Removing signed libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc files: removed './b1/libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc' removed './b2/libbiosoup-dev_0.11.0-2_arm64.buildinfo.asc' 1732257868 arm64 unstable libbiosoup-dev Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/libbiosoup-dev_0.11.0-2.rbuild.log: 76.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/libbiosoup-dev_0.11.0-2.rbuild.log.gz [2024-11-22 06:44:28] INFO: Starting at 2024-11-22 06:44:28.940537 [2024-11-22 06:44:29] INFO: Generating the pages of 1 package(s) [2024-11-22 06:44:29] INFO: Finished at 2024-11-22 06:44:29.225627, took: 0:00:00.285099 All cleanup done. Fri Nov 22 06:44:29 UTC 2024 - total duration: 0h 2m 29s. Fri Nov 22 06:44:29 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-Iqd81Qb4, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2min 32.215s CPU time consumed: 7.130s