Running as unit: rb-build-arm64_9-47403.service ==================================================================================== Fri Nov 22 14:29:49 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_arm64_9) on jenkins, called using "codethink03-arm64 codethink02-arm64" as arguments. Fri Nov 22 14:29:49 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-3JW9gWZA" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 14:29:49 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Nov 22 14:29:49 UTC 2024 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-UaLVf1' Fri Nov 22 14:29:49 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Fri Nov 22 14:29:49 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-0d50fG' ok, let's check if rasmol is building anywhere yet… ok, rasmol is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of rasmol in unstable on arm64 on jenkins now. 1st build will be done on codethink03-arm64.debian.net. 2nd build will be done on codethink02-arm64.debian.net. ============================================================================= Fri Nov 22 14:29:57 UTC 2024 I: starting to build rasmol/unstable/arm64 on jenkins on '2024-11-22 14:29' Fri Nov 22 14:29:57 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_9/47403/console.log 1732285797 arm64 unstable rasmol Fri Nov 22 14:29:57 UTC 2024 I: Downloading source for unstable/rasmol=2.7.6.0-3 --2024-11-22 14:29:58-- http://deb.debian.org/debian/pool/main/r/rasmol/rasmol_2.7.6.0-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2163 (2.1K) [text/prs.lines.tag] Saving to: ‘rasmol_2.7.6.0-3.dsc’ 0K .. 100% 285M=0s 2024-11-22 14:29:58 (285 MB/s) - ‘rasmol_2.7.6.0-3.dsc’ saved [2163/2163] --2024-11-22 14:29:58-- http://deb.debian.org/debian/pool/main/r/rasmol/rasmol_2.7.6.0-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2163 (2.1K) [text/prs.lines.tag] Saving to: ‘rasmol_2.7.6.0-3.dsc’ 0K .. 100% 285M=0s 2024-11-22 14:29:58 (285 MB/s) - ‘rasmol_2.7.6.0-3.dsc’ saved [2163/2163] Fri Nov 22 14:29:58 UTC 2024 I: rasmol_2.7.6.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: rasmol Binary: rasmol, rasmol-doc Architecture: any all Version: 2.7.6.0-3 Maintainer: Debian Science Maintainers Uploaders: Teemu Ikonen Homepage: http://rasmol.org Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/science-team/rasmol Vcs-Git: https://salsa.debian.org/science-team/rasmol.git Build-Depends: debhelper-compat (= 13), bash-completion, xutils-dev, libx11-dev, libxext-dev, libxi-dev, x11proto-core-dev, libvte-2.91-dev, libgtk-3-dev, libcbf-dev, libcvector-dev, libcqrlib-dev, libcneartree-dev Package-List: rasmol deb science optional arch=any rasmol-doc deb doc optional arch=all Checksums-Sha1: d96139f64fb4de1d0ab2db86926bcfeb1050e8f2 9815399 rasmol_2.7.6.0.orig.tar.gz 0c5d38fefd96d768990d0b1c2d5f00554185a88f 75336 rasmol_2.7.6.0-3.debian.tar.xz Checksums-Sha256: 3e623692f66cc7a760527489ee0e10bebde5776092079a3c6bb6c6a63c83ecac 9815399 rasmol_2.7.6.0.orig.tar.gz 4277961ba89930394d58d767ff423484d826ce6c82805deea6b7fa02d368cc45 75336 rasmol_2.7.6.0-3.debian.tar.xz Files: 68b74b3699944bda30b293d87194bdfb 9815399 rasmol_2.7.6.0.orig.tar.gz fe7cef28e6c422f9e90a6c4bc71767d0 75336 rasmol_2.7.6.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmLjnl0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGi4Q/+P4U/rHsWnRv/XeRa1C8640UHu2IWXPXB ftumhOvwU3l4dPT6aCjTfz6P3pH8iPy6DAuJ5Ka5xllkZBQ3xhGtpEJ4XLY//lM/ ufTVaRszoljuqlKZ4PE9jtjIKWKNc1W5e4HpIvBXJMAdS7zeDMDl+UdH+v1oG3UB V4CoLJrZ/CSAMMF0D26/YjlDU5SrVbSGBhciQs/BEL+aieWXjmYyFGYmmsVEpn8L sIW1D7oR8tD81C+OPMOkIt51BuIJYS8ussoBPvyf87kozP1EUl/MolopgWs5zA6m /K2b0pxqZDuIAWolCyYFhY1uWAFb6GCfZ1YMwq6VYB4/78H/lUogqDWfC5+u/pP3 R3lXZw+86wnhU81ui6L6nSIVNK/iIhB1gSuyXPgbeWOcDRXaGXErN2r869HfBLo+ w3ox1bCl82fDBzqddi9yZ16BdpCBwTRWGZup7x4ID8yqSmdBSKJhk4nIQXdmzAuw d+v7EuFukWwvTtGrmT7CNgriThuYCrmFB/XqIXRf37x8+MuzG/mN9vD4O03jOMDe iecsm8AYRjutmoFiYHdMfTTEPYfvVLCx+jTr+qRNBgGtG9XbvWyCwAHPMIlCPk+K I8X1sC1pncbzawpJN/6+9oaZGZUxpS5WaHi8C9MQdHX4/SmT9/3nK8BT10WAEN4U KgmzKbvO7yE= =2j4N -----END PGP SIGNATURE----- Fri Nov 22 14:29:58 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 14:29:58 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Fri Nov 22 14:29:58 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Fri Nov 22 14:29:58 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink03-arm64.debian.net is marked as down. Fri Nov 22 14:29:58 UTC 2024 - checking via ssh if codethink03-arm64.debian.net is up. removed '/tmp/read-only-fs-test-FaRqcO' ==================================================================================== Thu Dec 25 20:52:59 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink03-arm64, called using "1 rasmol unstable /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m 2.7.6.0-3" as arguments. Thu Dec 25 20:52:59 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-ymtRMVkp" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Dec 25 20:53:00 UTC 2025 I: Downloading source for unstable/rasmol=2.7.6.0-3 Reading package lists... NOTICE: 'rasmol' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/rasmol.git Please use: git clone https://salsa.debian.org/science-team/rasmol.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 9893 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (dsc) [2163 B] Get:2 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (tar) [9815 kB] Get:3 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (diff) [75.3 kB] Fetched 9893 kB in 0s (20.6 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'rasmol' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/rasmol.git Please use: git clone https://salsa.debian.org/science-team/rasmol.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 9893 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (dsc) [2163 B] Get:2 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (tar) [9815 kB] Get:3 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (diff) [75.3 kB] Fetched 9893 kB in 0s (20.6 MB/s) Download complete and in download only mode ============================================================================= Building rasmol in unstable on arm64 on codethink03-arm64 now. Date: Thu Dec 25 20:53:00 GMT 2025 Date UTC: Thu Dec 25 20:53:00 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 08:53:01 -12 2025 I: pbuilder-time-stamp: 1766695981 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [rasmol_2.7.6.0-3.dsc] I: copying [./rasmol_2.7.6.0.orig.tar.gz] I: copying [./rasmol_2.7.6.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Jul 29 08:46:21 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./rasmol_2.7.6.0-3.dsc: no acceptable signature found dpkg-source: info: extracting rasmol in rasmol-2.7.6.0 dpkg-source: info: unpacking rasmol_2.7.6.0.orig.tar.gz dpkg-source: info: unpacking rasmol_2.7.6.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_imakefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3479771/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='1416b92af52f424da970949375479627' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3479771' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_qnVE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1 --logfile b1/build.log rasmol_2.7.6.0-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3479771/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), bash-completion, xutils-dev, libx11-dev, libxext-dev, libxi-dev, x11proto-core-dev, libvte-2.91-dev, libgtk-3-dev, libcbf-dev, libcvector-dev, libcqrlib-dev, libcneartree-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on xutils-dev; however: Package xutils-dev is not installed. pbuilder-satisfydepends-dummy depends on libx11-dev; however: Package libx11-dev is not installed. pbuilder-satisfydepends-dummy depends on libxext-dev; however: Package libxext-dev is not installed. pbuilder-satisfydepends-dummy depends on libxi-dev; however: Package libxi-dev is not installed. pbuilder-satisfydepends-dummy depends on x11proto-core-dev; however: Package x11proto-core-dev is not installed. pbuilder-satisfydepends-dummy depends on libvte-2.91-dev; however: Package libvte-2.91-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtk-3-dev; however: Package libgtk-3-dev is not installed. pbuilder-satisfydepends-dummy depends on libcbf-dev; however: Package libcbf-dev is not installed. pbuilder-satisfydepends-dummy depends on libcvector-dev; however: Package libcvector-dev is not installed. pbuilder-satisfydepends-dummy depends on libcqrlib-dev; however: Package libcqrlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libcneartree-dev; however: Package libcneartree-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdextrautils{a} comerr-dev{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gir1.2-atk-1.0{a} gir1.2-atspi-2.0{a} gir1.2-cloudproviders-0.3.0{a} gir1.2-freedesktop{a} gir1.2-freedesktop-dev{a} gir1.2-gdkpixbuf-2.0{a} gir1.2-glib-2.0{a} gir1.2-glib-2.0-dev{a} gir1.2-gtk-3.0{a} gir1.2-harfbuzz-0.0{a} gir1.2-pango-1.0{a} gir1.2-vte-2.91{a} girepository-tools{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libapparmor1{a} libarchive-zip-perl{a} libatk-bridge2.0-0t64{a} libatk-bridge2.0-dev{a} libatk1.0-0t64{a} libatk1.0-dev{a} libatspi2.0-0t64{a} libatspi2.0-dev{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblkid-dev{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libcbf-dev{a} libcbf1t64{a} libcloudproviders-dev{a} libcloudproviders0{a} libcneartree-dev{a} libcneartree7t64{a} libcolord2{a} libcom-err2{a} libcqrlib-dev{a} libcqrlib2{a} libcups2t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcvector-dev{a} libcvector2{a} libdatrie-dev{a} libdatrie1{a} libdbus-1-3{a} libdbus-1-dev{a} libdconf1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libegl1-mesa-dev{a} libelf1t64{a} libepoxy-dev{a} libepoxy0{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfreetype-dev{a} libfreetype6{a} libfribidi-dev{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf-2.0-dev{a} libgdk-pixbuf2.0-bin{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgio-2.0-dev{a} libgio-2.0-dev-bin{a} libgirepository-2.0-0{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgraphite2-dev{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgtk-3-0t64{a} libgtk-3-common{a} libgtk-3-dev{a} libharfbuzz-cairo0{a} libharfbuzz-dev{a} libharfbuzz-gobject0{a} libharfbuzz-icu0{a} libharfbuzz-subset0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libice-dev{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} liblerc-dev{a} liblerc4{a} libllvm19{a} liblzma-dev{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libmount-dev{a} libnghttp2-14{a} libnghttp2-dev{a} libnsl2{a} libopengl-dev{a} libopengl0{a} libp11-kit-dev{a} libpam-systemd{a} libpango-1.0-0{a} libpango1.0-dev{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpangoxft-1.0-0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm-dev{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsysprof-capture-4-dev{a} libsystemd-shared{a} libsz2{a} libtasn1-6-dev{a} libthai-data{a} libthai-dev{a} libthai0{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunbound8{a} libvte-2.91-0{a} libvte-2.91-common{a} libvte-2.91-dev{a} libvulkan1{a} libwayland-bin{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-dev{a} libwayland-egl1{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxcomposite-dev{a} libxcomposite1{a} libxcursor-dev{a} libxcursor1{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi-dev{a} libxi6{a} libxinerama-dev{a} libxinerama1{a} libxkbcommon-dev{a} libxkbcommon0{a} libxml2{a} libxrandr-dev{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence1{a} libxtst-dev{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} native-architecture{a} netbase{a} nettle-dev{a} pango1.0-tools{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3-packaging{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} systemd{a} systemd-sysv{a} tzdata{a} uuid-dev{a} wayland-protocols{a} x11-common{a} x11proto-dev{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} xutils-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core bzip2-doc ca-certificates chrony curl krb5-locales libarchive-cpio-perl libgtk-3-bin libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libpng-tools librsvg2-common libsasl2-modules libtasn1-doc libvte-2.91-doc linux-sysctl-defaults lynx mesa-vulkan-drivers ntpsec openntpd psmisc publicsuffix systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 354 newly installed, 0 to remove and 0 not upgraded. Need to get 146 MB of archives. After unpacking 672 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libapparmor1 arm64 3.1.7-1+b3 [41.8 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libsystemd-shared arm64 257~rc2-3 [1902 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 systemd arm64 257~rc2-3 [3360 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 systemd-sysv arm64 257~rc2-3 [59.3 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.14.10-6 [196 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 dbus-bin arm64 1.14.10-6 [105 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 dbus-daemon arm64 1.14.10-6 [178 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 dbus arm64 1.14.10-6 [97.4 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-3 [255 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.7-3 [671 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B] Get: 32 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 sgml-base all 1.31 [15.4 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 bash-completion all 1:2.14.0-2 [310 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libpam-systemd arm64 257~rc2-3 [270 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b1 [755 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.4.0-0.1+b1 [112 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.4.0-0.1+b1 [268 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1+b1 [131 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 gtk-update-icon-cache arm64 4.16.5+ds-2 [49.9 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 at-spi2-common all 2.54.0-1 [170 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.1-1+b1 [55.1 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 dbus-user-session arm64 1.14.10-6 [79.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libdconf1 arm64 0.40.0-4+b3 [40.4 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 dconf-service arm64 0.40.0-4+b3 [31.1 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 dconf-gsettings-backend arm64 0.40.0-4+b3 [27.4 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 82 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-1.1+b1 [318 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-1.1+b1 [387 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-1.1+b1 [463 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 gir1.2-glib-2.0 arm64 2.82.2-3 [193 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [49.7 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 gir1.2-atk-1.0 arm64 2.54.0-1 [25.5 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b2 [27.2 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.2-2 [483 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libcairo-gobject2 arm64 1.18.2-2 [130 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 gir1.2-freedesktop arm64 1.82.0-2 [59.7 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [72.9 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 gir1.2-atspi-2.0 arm64 2.54.0-1 [22.9 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libcloudproviders0 arm64 0.3.6-1+b1 [27.7 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 gir1.2-cloudproviders-0.3.0 arm64 0.3.6-1+b1 [7340 B] Get: 116 http://deb.debian.org/debian unstable/main arm64 gir1.2-glib-2.0-dev arm64 2.82.2-3 [903 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 gir1.2-freedesktop-dev arm64 1.82.0-2 [50.8 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 gir1.2-gdkpixbuf-2.0 arm64 2.42.12+dfsg-1+b1 [14.3 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-gobject0 arm64 10.0.1-1 [32.0 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 gir1.2-harfbuzz-0.0 arm64 10.0.1-1 [41.8 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [210 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [51.8 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [33.5 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 libxft2 arm64 2.3.6-1+b2 [51.6 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 libpangoxft-1.0-0 arm64 1.54.0+ds-3 [26.8 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 gir1.2-pango-1.0 arm64 1.54.0+ds-3 [38.6 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [64.4 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 libcolord2 arm64 1.4.7-1+b2 [130 kB] Get: 136 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-13+b3 [112 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-13+b3 [42.3 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-13+b3 [46.0 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.10-2 [235 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.23.0-1+b1 [26.0 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.23.0-1+b1 [11.5 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.23.0-1+b1 [5768 B] Get: 144 http://deb.debian.org/debian unstable/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b2 [20.5 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.2-1+b1 [37.1 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b2 [16.1 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.7.0-1 [106 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b1 [36.0 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 libgtk-3-0t64 arm64 3.24.43-4 [2546 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 gir1.2-gtk-3.0 arm64 3.24.43-4 [223 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-common arm64 0.78.1-1 [689 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-0 arm64 0.78.1-1 [883 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 gir1.2-vte-2.91 arm64 0.78.1-1 [652 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 native-architecture all 0.2.3 [2108 B] Get: 159 http://deb.debian.org/debian unstable/main arm64 libgirepository-2.0-0 arm64 2.82.2-3 [130 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 girepository-tools arm64 2.82.2-3 [134 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.10.10+repack-4 [23.5 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 icu-devtools arm64 72.1-5+b1 [195 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-3 [56.7 kB] Get: 164 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-3 [40.3 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-3 [40.8 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-3 [52.2 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-3 [126 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 170 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 libffi-dev arm64 3.4.6-1 [57.0 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 uuid-dev arm64 2.40.2-11 [47.8 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 libblkid-dev arm64 2.40.2-11 [208 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 libsepol-dev arm64 3.7-1 [354 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.44-4 [230 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.44-4 [220 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 libpcre2-posix3 arm64 10.44-4 [60.4 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 libpcre2-dev arm64 10.44-4 [704 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 libselinux1-dev arm64 3.7-3+b1 [164 kB] Get: 183 http://deb.debian.org/debian unstable/main arm64 libmount-dev arm64 2.40.2-11 [28.9 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 libsysprof-capture-4-dev arm64 47.1-1 [49.1 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 libgio-2.0-dev arm64 2.82.2-3 [1691 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 libglib2.0-data all 2.82.2-3 [1275 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 libglib2.0-bin arm64 2.82.2-3 [123 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.2-1 [55.3 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 libgio-2.0-dev-bin arm64 2.82.2-3 [162 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev-bin arm64 2.82.2-3 [51.5 kB] Get: 192 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev arm64 2.82.2-3 [52.3 kB] Get: 193 http://deb.debian.org/debian unstable/main arm64 libatk1.0-dev arm64 2.54.0-1 [106 kB] Get: 194 http://deb.debian.org/debian unstable/main arm64 xml-core all 0.19 [20.1 kB] Get: 195 http://deb.debian.org/debian unstable/main arm64 libdbus-1-dev arm64 1.14.10-6 [244 kB] Get: 196 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+23.1 [216 kB] Get: 197 http://deb.debian.org/debian unstable/main arm64 libxtst6 arm64 2:1.2.3-1.1+b2 [26.0 kB] Get: 198 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 199 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2024.1-1 [603 kB] Get: 200 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB] Get: 201 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-1 [44.2 kB] Get: 202 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 203 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB] Get: 204 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.10-2 [877 kB] Get: 205 http://deb.debian.org/debian unstable/main arm64 libxext-dev arm64 2:1.3.4-1+b2 [105 kB] Get: 206 http://deb.debian.org/debian unstable/main arm64 libxfixes-dev arm64 1:6.0.0-2+b2 [22.8 kB] Get: 207 http://deb.debian.org/debian unstable/main arm64 libxi-dev arm64 2:1.8.2-1 [240 kB] Get: 208 http://deb.debian.org/debian unstable/main arm64 libxtst-dev arm64 2:1.2.3-1.1+b2 [30.4 kB] Get: 209 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-dev arm64 2.54.0-1 [81.8 kB] Get: 210 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-dev arm64 2.54.0-1 [9740 B] Get: 211 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b6 [308 kB] Get: 212 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB] Get: 213 http://deb.debian.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b1 [49.6 kB] Get: 214 http://deb.debian.org/debian unstable/main arm64 libcairo-script-interpreter2 arm64 1.18.2-2 [57.4 kB] Get: 215 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.6.4-1 [143 kB] Get: 216 http://deb.debian.org/debian unstable/main arm64 libpng-dev arm64 1.6.44-2 [360 kB] Get: 217 http://deb.debian.org/debian unstable/main arm64 libfreetype-dev arm64 2.13.3+dfsg-1 [600 kB] Get: 218 http://deb.debian.org/debian unstable/main arm64 libfontconfig-dev arm64 2.15.0-1.1+b1 [411 kB] Get: 219 http://deb.debian.org/debian unstable/main arm64 libpixman-1-dev arm64 0.44.0-3 [11.4 kB] Get: 220 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Get: 221 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB] Get: 222 http://deb.debian.org/debian unstable/main arm64 libice-dev arm64 2:1.1.1-1 [73.0 kB] Get: 223 http://deb.debian.org/debian unstable/main arm64 libsm-dev arm64 2:1.2.4-1 [38.0 kB] Get: 224 http://deb.debian.org/debian unstable/main arm64 libxcb-render0-dev arm64 1.17.0-2+b1 [119 kB] Get: 225 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0-dev arm64 1.17.0-2+b1 [108 kB] Get: 226 http://deb.debian.org/debian unstable/main arm64 libxrender-dev arm64 1:0.9.10-1.1+b2 [35.7 kB] Get: 227 http://deb.debian.org/debian unstable/main arm64 libcairo2-dev arm64 1.18.2-2 [43.0 kB] Get: 228 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 229 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 230 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 231 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 232 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 233 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 234 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 235 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 236 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB] Get: 237 http://deb.debian.org/debian unstable/main arm64 libcbf1t64 arm64 0.9.7+dfsg1-4+b1 [332 kB] Get: 238 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB] Get: 239 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-4 [88.1 kB] Get: 240 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB] Get: 241 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.0 kB] Get: 242 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB] Get: 243 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB] Get: 244 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB] Get: 245 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB] Get: 246 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB] Get: 247 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-3 [15.8 kB] Get: 248 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.5.18+dfsg-3+b1 [300 kB] Get: 249 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB] Get: 250 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Get: 251 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 252 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB] Get: 253 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 254 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1 [553 kB] Get: 255 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.8-2 [446 kB] Get: 256 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.8-2 [446 kB] Get: 257 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB] Get: 258 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB] Get: 259 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB] Get: 260 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.8-2 [1404 kB] Get: 261 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB] Get: 262 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB] Get: 263 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Get: 264 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB] Get: 265 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.11.0-1 [447 kB] Get: 266 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.10.10+repack-4 [2697 kB] Get: 267 http://deb.debian.org/debian unstable/main arm64 libcbf-dev arm64 0.9.7+dfsg1-4+b1 [438 kB] Get: 268 http://deb.debian.org/debian unstable/main arm64 libcloudproviders-dev arm64 0.3.6-1+b1 [17.5 kB] Get: 269 http://deb.debian.org/debian unstable/main arm64 libcvector2 arm64 1.0.4.1-2+b2 [6148 B] Get: 270 http://deb.debian.org/debian unstable/main arm64 libcneartree7t64 arm64 5.1.1+dfsg1-2.1+b1 [25.9 kB] Get: 271 http://deb.debian.org/debian unstable/main arm64 libcneartree-dev arm64 5.1.1+dfsg1-2.1+b1 [78.2 kB] Get: 272 http://deb.debian.org/debian unstable/main arm64 libcqrlib2 arm64 1.1.4-3+b2 [12.1 kB] Get: 273 http://deb.debian.org/debian unstable/main arm64 libcqrlib-dev arm64 1.1.4-3+b2 [25.0 kB] Get: 274 http://deb.debian.org/debian unstable/main arm64 libcvector-dev arm64 1.0.4.1-2+b2 [9920 B] Get: 275 http://deb.debian.org/debian unstable/main arm64 libdatrie-dev arm64 0.2.13-3+b1 [18.5 kB] Get: 276 http://deb.debian.org/debian unstable/main arm64 libdeflate-dev arm64 1.22-1 [51.2 kB] Get: 277 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B] Get: 278 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB] Get: 279 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB] Get: 280 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.123-1 [21.3 kB] Get: 281 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB] Get: 282 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB] Get: 283 http://deb.debian.org/debian unstable/main arm64 libwayland-server0 arm64 1.23.0-1+b1 [33.4 kB] Get: 284 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB] Get: 285 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.2.7-1 [48.0 kB] Get: 286 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 287 http://deb.debian.org/debian unstable/main arm64 libllvm19 arm64 1:19.1.3-2 [23.3 MB] Get: 288 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 289 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB] Get: 290 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [241 kB] Get: 291 http://deb.debian.org/debian unstable/main arm64 libxcb-dri2-0 arm64 1.17.0-2+b1 [107 kB] Get: 292 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB] Get: 293 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB] Get: 294 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB] Get: 295 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB] Get: 296 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b2 [9076 B] Get: 297 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 24.2.7-1 [7687 kB] Get: 298 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 24.2.7-1 [42.0 kB] Get: 299 http://deb.debian.org/debian unstable/main arm64 libegl-mesa0 arm64 24.2.7-1 [124 kB] Get: 300 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-1+b2 [34.0 kB] Get: 301 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB] Get: 302 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b3 [19.2 kB] Get: 303 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.296.0-1 [123 kB] Get: 304 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.2.7-1 [43.6 kB] Get: 305 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.2.7-1 [153 kB] Get: 306 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB] Get: 307 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB] Get: 308 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-1+b2 [15.8 kB] Get: 309 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-1+b2 [101 kB] Get: 310 http://deb.debian.org/debian unstable/main arm64 libegl-dev arm64 1.7.0-1+b2 [19.5 kB] Get: 311 http://deb.debian.org/debian unstable/main arm64 libglvnd-core-dev arm64 1.7.0-1+b2 [13.4 kB] Get: 312 http://deb.debian.org/debian unstable/main arm64 libgles1 arm64 1.7.0-1+b2 [12.6 kB] Get: 313 http://deb.debian.org/debian unstable/main arm64 libgles2 arm64 1.7.0-1+b2 [18.0 kB] Get: 314 http://deb.debian.org/debian unstable/main arm64 libgles-dev arm64 1.7.0-1+b2 [50.8 kB] Get: 315 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-1+b2 [32.1 kB] Get: 316 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-1+b2 [5376 B] Get: 317 http://deb.debian.org/debian unstable/main arm64 libglvnd-dev arm64 1.7.0-1+b2 [5144 B] Get: 318 http://deb.debian.org/debian unstable/main arm64 libegl1-mesa-dev arm64 24.2.7-1 [22.7 kB] Get: 319 http://deb.debian.org/debian unstable/main arm64 libepoxy-dev arm64 1.5.10-2 [127 kB] Get: 320 http://deb.debian.org/debian unstable/main arm64 libfribidi-dev arm64 1.0.15-1 [111 kB] Get: 321 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-bin arm64 2.42.12+dfsg-1+b1 [19.0 kB] Get: 322 http://deb.debian.org/debian unstable/main arm64 libjbig-dev arm64 2.1-6.1+b2 [30.5 kB] Get: 323 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.6.3-1+b1 [312 kB] Get: 324 http://deb.debian.org/debian unstable/main arm64 libwebpdemux2 arm64 1.4.0-0.1+b1 [110 kB] Get: 325 http://deb.debian.org/debian unstable/main arm64 libwebpmux3 arm64 1.4.0-0.1+b1 [122 kB] Get: 326 http://deb.debian.org/debian unstable/main arm64 libwebpdecoder3 arm64 1.4.0-0.1+b1 [179 kB] Get: 327 http://deb.debian.org/debian unstable/main arm64 libsharpyuv-dev arm64 1.4.0-0.1+b1 [115 kB] Get: 328 http://deb.debian.org/debian unstable/main arm64 libwebp-dev arm64 1.4.0-0.1+b1 [400 kB] Get: 329 http://deb.debian.org/debian unstable/main arm64 libtiffxx6 arm64 4.5.1+git230720-5 [149 kB] Get: 330 http://deb.debian.org/debian unstable/main arm64 liblerc-dev arm64 4.0.0+ds-5 [164 kB] Get: 331 http://deb.debian.org/debian unstable/main arm64 libtiff-dev arm64 4.5.1+git230720-5 [451 kB] Get: 332 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-dev arm64 2.42.12+dfsg-1+b1 [52.7 kB] Get: 333 http://deb.debian.org/debian unstable/main arm64 libgraphite2-dev arm64 1.3.14-2+b1 [20.3 kB] Get: 334 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-icu0 arm64 10.0.1-1 [15.3 kB] Get: 335 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-subset0 arm64 10.0.1-1 [507 kB] Get: 336 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-cairo0 arm64 10.0.1-1 [41.9 kB] Get: 337 http://deb.debian.org/debian unstable/main arm64 libicu-dev arm64 72.1-5+b1 [10.3 MB] Get: 338 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-dev arm64 10.0.1-1 [145 kB] Get: 339 http://deb.debian.org/debian unstable/main arm64 libthai-dev arm64 0.1.29-2+b1 [24.0 kB] Get: 340 http://deb.debian.org/debian unstable/main arm64 libxft-dev arm64 2.3.6-1+b2 [72.0 kB] Get: 341 http://deb.debian.org/debian unstable/main arm64 pango1.0-tools arm64 1.54.0+ds-3 [41.1 kB] Get: 342 http://deb.debian.org/debian unstable/main arm64 libpango1.0-dev arm64 1.54.0+ds-3 [154 kB] Get: 343 http://deb.debian.org/debian unstable/main arm64 libwayland-bin arm64 1.23.0-1+b1 [20.5 kB] Get: 344 http://deb.debian.org/debian unstable/main arm64 libwayland-dev arm64 1.23.0-1+b1 [73.6 kB] Get: 345 http://deb.debian.org/debian unstable/main arm64 libxcomposite-dev arm64 1:0.4.6-1 [20.2 kB] Get: 346 http://deb.debian.org/debian unstable/main arm64 libxcursor-dev arm64 1:1.2.2-1+b1 [49.3 kB] Get: 347 http://deb.debian.org/debian unstable/main arm64 libxdamage-dev arm64 1:1.1.6-1+b2 [15.5 kB] Get: 348 http://deb.debian.org/debian unstable/main arm64 libxinerama-dev arm64 2:1.1.4-3+b2 [18.4 kB] Get: 349 http://deb.debian.org/debian unstable/main arm64 libxkbcommon-dev arm64 1.7.0-1 [53.6 kB] Get: 350 http://deb.debian.org/debian unstable/main arm64 libxrandr-dev arm64 2:1.5.4-1+b1 [44.5 kB] Get: 351 http://deb.debian.org/debian unstable/main arm64 wayland-protocols all 1.38-1 [102 kB] Get: 352 http://deb.debian.org/debian unstable/main arm64 libgtk-3-dev arm64 3.24.43-4 [1128 kB] Get: 353 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-dev arm64 0.78.1-1 [691 kB] Get: 354 http://deb.debian.org/debian unstable/main arm64 xutils-dev arm64 1:7.7+7 [239 kB] Fetched 146 MB in 1s (116 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b3_arm64.deb ... Unpacking libapparmor1:arm64 (3.1.7-1+b3) ... Selecting previously unselected package libsystemd-shared:arm64. Preparing to unpack .../libsystemd-shared_257~rc2-3_arm64.deb ... Unpacking libsystemd-shared:arm64 (257~rc2-3) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_257~rc2-3_arm64.deb ... Unpacking systemd (257~rc2-3) ... Setting up libapparmor1:arm64 (3.1.7-1+b3) ... Setting up libsystemd-shared:arm64 (257~rc2-3) ... Setting up systemd (257~rc2-3) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... 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Unpacking dbus-bin (1.14.10-6) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../3-dbus-session-bus-common_1.14.10-6_all.deb ... Unpacking dbus-session-bus-common (1.14.10-6) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../4-libexpat1_2.6.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.4-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../5-dbus-daemon_1.14.10-6_arm64.deb ... Unpacking dbus-daemon (1.14.10-6) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../6-dbus-system-bus-common_1.14.10-6_all.deb ... Unpacking dbus-system-bus-common (1.14.10-6) ... Selecting previously unselected package dbus. Preparing to unpack .../7-dbus_1.14.10-6_arm64.deb ... Unpacking dbus (1.14.10-6) ... Selecting previously unselected package libpython3.12-minimal:arm64. Preparing to unpack .../8-libpython3.12-minimal_3.12.7-3_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.7-3) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../9-python3.12-minimal_3.12.7-3_arm64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:arm64 (3.12.7-3) ... Setting up libexpat1:arm64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... 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Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:arm64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:arm64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_arm64.deb ... Unpacking libnsl2:arm64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../14-libreadline8t64_8.2-5_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:arm64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_arm64.deb ... Unpacking libpython3.12-stdlib:arm64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_arm64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... 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Preparing to unpack .../026-libsharpyuv0_1.4.0-0.1+b1_arm64.deb ... Unpacking libsharpyuv0:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libwebp7:arm64. Preparing to unpack .../027-libwebp7_1.4.0-0.1+b1_arm64.deb ... Unpacking libwebp7:arm64 (1.4.0-0.1+b1) ... Selecting previously unselected package libtiff6:arm64. Preparing to unpack .../028-libtiff6_4.5.1+git230720-5_arm64.deb ... Unpacking libtiff6:arm64 (4.5.1+git230720-5) ... Selecting previously unselected package libgdk-pixbuf-2.0-0:arm64. Preparing to unpack .../029-libgdk-pixbuf-2.0-0_2.42.12+dfsg-1+b1_arm64.deb ... Unpacking libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1+b1) ... Selecting previously unselected package gtk-update-icon-cache. Preparing to unpack .../030-gtk-update-icon-cache_4.16.5+ds-2_arm64.deb ... No diversion 'diversion of /usr/sbin/update-icon-caches to /usr/sbin/update-icon-caches.gtk2 by libgtk-3-bin', none removed. No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. Unpacking gtk-update-icon-cache (4.16.5+ds-2) ... Selecting previously unselected package hicolor-icon-theme. Preparing to unpack .../031-hicolor-icon-theme_0.18-1_all.deb ... Unpacking hicolor-icon-theme (0.18-1) ... Selecting previously unselected package adwaita-icon-theme. Preparing to unpack .../032-adwaita-icon-theme_47.0-2_all.deb ... Unpacking adwaita-icon-theme (47.0-2) ... Selecting previously unselected package at-spi2-common. Preparing to unpack .../033-at-spi2-common_2.54.0-1_all.deb ... Unpacking at-spi2-common (2.54.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../034-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../035-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... 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Selecting previously unselected package dconf-service. Preparing to unpack .../042-dconf-service_0.40.0-4+b3_arm64.deb ... Unpacking dconf-service (0.40.0-4+b3) ... Selecting previously unselected package dconf-gsettings-backend:arm64. Preparing to unpack .../043-dconf-gsettings-backend_0.40.0-4+b3_arm64.deb ... Unpacking dconf-gsettings-backend:arm64 (0.40.0-4+b3) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../044-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../045-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../046-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../047-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... 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Setting up libgles1:arm64 (1.7.0-1+b2) ... Setting up libdbus-1-3:arm64 (1.14.10-6) ... Setting up libfribidi0:arm64 (1.0.15-1) ... Setting up libproc2-0:arm64 (2:4.0.4-6) ... Setting up comerr-dev:arm64 (2.1-1.47.1-1+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:arm64 (3.3.2-2) ... Setting up libpng16-16t64:arm64 (1.6.44-2) ... Setting up autopoint (0.22.5-2) ... Setting up icu-devtools (72.1-5+b1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libcqrlib2:arm64 (1.1.4-3+b2) ... Setting up libsepol-dev:arm64 (3.7-1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up gir1.2-glib-2.0:arm64 (2.82.2-3) ... Setting up libsensors5:arm64 (1:3.6.0-10+b1) ... Setting up liblerc-dev:arm64 (4.0.0+ds-5) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libidn2-dev:arm64 (2.3.7-2+b1) ... Setting up libglapi-mesa:arm64 (24.2.7-1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:arm64 (14.2.0-8) ... 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Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libcneartree7t64:arm64 (5.1.1+dfsg1-2.1+b1) ... Setting up libwayland-egl1:arm64 (1.23.0-1+b1) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libopengl-dev:arm64 (1.7.0-1+b2) ... Setting up dbus-system-bus-common (1.14.10-6) ... useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Setting up libsharpyuv-dev:arm64 (1.4.0-0.1+b1) ... Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ... Setting up libwebpmux3:arm64 (1.4.0-0.1+b1) ... Setting up libtiffxx6:arm64 (4.5.1+git230720-5) ... Setting up libdeflate-dev:arm64 (1.22-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxcomposite1:arm64 (1:0.4.6-1) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:arm64 (72.1-5+b1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up dbus-bin (1.14.10-6) ... Setting up libbrotli-dev:arm64 (1.1.0-2+b6) ... Setting up libp11-kit-dev:arm64 (0.25.5-2+b1) ... Setting up libsz2:arm64 (1.1.3-1+b1) ... Setting up libbz2-dev:arm64 (1.0.8-6) ... Setting up libxkbcommon0:arm64 (1.7.0-1) ... Setting up libwayland-client0:arm64 (1.23.0-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:arm64 (1.17.0-2+b1) ... Setting up libblkid-dev:arm64 (2.40.2-11) ... Setting up libllvm19:arm64 (1:19.1.3-2) ... Setting up libx11-xcb1:arm64 (2:1.8.10-2) ... Setting up libice6:arm64 (2:1.1.1-1) ... Setting up gettext (0.22.5-2) ... Setting up libxdamage1:arm64 (1:1.1.6-1+b2) ... Setting up libgmp-dev:arm64 (2:6.3.0+dfsg-2+b2) ... Setting up libatk1.0-0t64:arm64 (2.54.0-1) ... Setting up libxau-dev:arm64 (1:1.0.11-1) ... Setting up libpcre2-dev:arm64 (10.44-4) ... Setting up nettle-dev:arm64 (3.10-1+b1) ... Setting up libxrender1:arm64 (1:0.9.10-1.1+b2) ... Setting up libice-dev:arm64 (2:1.1.1-1) ... Setting up libtool (2.4.7-8) ... Setting up libgirepository-2.0-0:arm64 (2.82.2-3) ... Setting up gir1.2-atk-1.0:arm64 (2.54.0-1) ... Setting up libselinux1-dev:arm64 (3.7-3+b1) ... Setting up libcvector-dev:arm64 (1.0.4.1-2+b2) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libfribidi-dev:arm64 (1.0.15-1) ... Setting up libwebpdemux2:arm64 (1.4.0-0.1+b1) ... Setting up libxkbcommon-dev:arm64 (1.7.0-1) ... Setting up libpng-dev:arm64 (1.6.44-2) ... Setting up libaec-dev:arm64 (1.1.3-1+b1) ... Setting up libavahi-common3:arm64 (0.8-13+b3) ... Setting up libjpeg-dev:arm64 (1:2.1.5-3+b1) ... Setting up libjbig-dev:arm64 (2.1-6.1+b2) ... Setting up libcloudproviders0:arm64 (0.3.6-1+b1) ... Setting up libxext6:arm64 (2:1.3.4-1+b2) ... Setting up libglib2.0-bin (2.82.2-3) ... Setting up dbus-daemon (1.14.10-6) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up libcolord2:arm64 (1.4.7-1+b2) ... Setting up pkgconf:arm64 (1.8.1-4) ... Setting up libxxf86vm1:arm64 (1:1.1.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libdconf1:arm64 (0.40.0-4+b3) ... Setting up dh-autoreconf (20) ... Setting up libthai0:arm64 (0.1.29-2+b1) ... Setting up libxdmcp-dev:arm64 (1:1.1.5-1) ... Setting up libwayland-bin (1.23.0-1+b1) ... Setting up libwebp-dev:arm64 (1.4.0-0.1+b1) ... Setting up libcqrlib-dev:arm64 (1.1.4-3+b2) ... Setting up libfreetype6:arm64 (2.13.3+dfsg-1) ... Setting up libtiff-dev:arm64 (4.5.1+git230720-5) ... Setting up libxfixes3:arm64 (1:6.0.0-2+b2) ... Setting up libldap-dev:arm64 (2.5.18+dfsg-3+b1) ... Setting up dbus (1.14.10-6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:arm64 (2:1.1.4-3+b2) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libxrandr2:arm64 (2:1.5.4-1+b1) ... Setting up libssh2-1-dev:arm64 (1.11.1-1) ... Setting up libreadline8t64:arm64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:arm64 (2.4.123-1) ... Setting up libdatrie-dev:arm64 (0.2.13-3+b1) ... Setting up groff-base (1.23.0-5) ... Setting up gir1.2-cloudproviders-0.3.0:arm64 (0.3.6-1+b1) ... Setting up libwayland-cursor0:arm64 (1.23.0-1+b1) ... Setting up xml-core (0.19) ... Setting up libcneartree-dev:arm64 (5.1.1+dfsg1-2.1+b1) ... Setting up libpam-systemd:arm64 (257~rc2-3) ... Setting up libharfbuzz0b:arm64 (10.0.1-1) ... Setting up libgdk-pixbuf-2.0-0:arm64 (2.42.12+dfsg-1+b1) ... Setting up libfontconfig1:arm64 (2.15.0-1.1+b1) ... Setting up libsm6:arm64 (2:1.2.4-1) ... Setting up libavahi-client3:arm64 (0.8-13+b3) ... Setting up libmount-dev:arm64 (2.40.2-11) ... Setting up libdrm-amdgpu1:arm64 (2.4.123-1) ... Setting up libgnutls28-dev:arm64 (3.8.8-2) ... Setting up gtk-update-icon-cache (4.16.5+ds-2) ... Setting up libnghttp2-dev:arm64 (1.64.0-1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:arm64 (2.3.6-1+b2) ... Setting up libgio-2.0-dev:arm64 (2.82.2-3) ... Setting up libharfbuzz-icu0:arm64 (10.0.1-1) ... Setting up girepository-tools:arm64 (2.82.2-3) ... Setting up libxcb1-dev:arm64 (1.17.0-2+b1) ... Setting up libxi6:arm64 (2:1.8.2-1) ... Setting up gir1.2-gdkpixbuf-2.0:arm64 (2.42.12+dfsg-1+b1) ... Setting up libcurl4t64:arm64 (8.11.0-1) ... Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Setting up libsm-dev:arm64 (2:1.2.4-1) ... Setting up libdrm-radeon1:arm64 (2.4.123-1) ... Setting up libxtst6:arm64 (2:1.2.3-1.1+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxcursor1:arm64 (1:1.2.2-1+b1) ... Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libx11-dev:arm64 (2:1.8.10-2) ... Setting up libharfbuzz-gobject0:arm64 (10.0.1-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libwayland-dev:arm64 (1.23.0-1+b1) ... Setting up libcairo2:arm64 (1.18.2-2) ... Setting up libfreetype-dev:arm64 (2.13.3+dfsg-1) ... Setting up libxfixes-dev:arm64 (1:6.0.0-2+b2) ... Setting up libxcb-shm0-dev:arm64 (1.17.0-2+b1) ... Setting up dbus-user-session (1.14.10-6) ... Setting up libharfbuzz-cairo0:arm64 (10.0.1-1) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgssrpc4t64:arm64 (1.21.3-3) ... Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxcb-render0-dev:arm64 (1.17.0-2+b1) ... Setting up libxext-dev:arm64 (2:1.3.4-1+b2) ... Setting up libthai-dev:arm64 (0.1.29-2+b1) ... Setting up libgdk-pixbuf2.0-bin (2.42.12+dfsg-1+b1) ... Setting up libnsl2:arm64 (1.3.0-3+b3) ... Setting up libharfbuzz-subset0:arm64 (10.0.1-1) ... Setting up libcairo-gobject2:arm64 (1.18.2-2) ... Setting up libpangoft2-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libxi-dev:arm64 (2:1.8.2-1) ... Setting up libxrender-dev:arm64 (1:0.9.10-1.1+b2) ... Setting up libcups2t64:arm64 (2.4.10-2) ... Setting up libpangocairo-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libkadm5clnt-mit12:arm64 (1.21.3-3) ... Setting up libxtst-dev:arm64 (2:1.2.3-1.1+b2) ... Setting up libxdamage-dev:arm64 (1:1.1.6-1+b2) ... Setting up libcairo-script-interpreter2:arm64 (1.18.2-2) ... Setting up libatk-bridge2.0-0t64:arm64 (2.54.0-1) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4) ... Setting up mesa-libgallium:arm64 (24.2.7-1) ... Setting up gir1.2-freedesktop:arm64 (1.82.0-2) ... Setting up libcbf1t64:arm64 (0.9.7+dfsg1-4+b1) ... Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ... Setting up libpangoxft-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libkdb5-10t64:arm64 (1.21.3-3) ... Setting up libgbm1:arm64 (24.2.7-1) ... Setting up libfontconfig-dev:arm64 (2.15.0-1.1+b1) ... Setting up libxcomposite-dev:arm64 (1:0.4.6-1) ... Setting up libxcursor-dev:arm64 (1:1.2.2-1+b1) ... Setting up python3.12 (3.12.7-3) ... Setting up libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libgl1-mesa-dri:arm64 (24.2.7-1) ... Setting up pango1.0-tools (1.54.0+ds-3) ... Setting up libhdf5-fortran-102t64:arm64 (1.10.10+repack-4) ... Setting up debhelper (13.20) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up gir1.2-atspi-2.0:arm64 (2.54.0-1) ... Setting up gir1.2-harfbuzz-0.0:arm64 (10.0.1-1) ... Setting up gir1.2-pango-1.0:arm64 (1.54.0+ds-3) ... Setting up libxrandr-dev:arm64 (2:1.5.4-1+b1) ... Setting up libegl-mesa0:arm64 (24.2.7-1) ... Setting up gir1.2-freedesktop-dev:arm64 (1.82.0-2) ... Setting up libxinerama-dev:arm64 (2:1.1.4-3+b2) ... Setting up libkadm5srv-mit12:arm64 (1.21.3-3) ... Setting up libegl1:arm64 (1.7.0-1+b2) ... Setting up libhdf5-hl-cpp-100t64:arm64 (1.10.10+repack-4) ... Setting up libpython3-stdlib:arm64 (3.12.7-1) ... Setting up libxft-dev:arm64 (2.3.6-1+b2) ... Setting up krb5-multidev:arm64 (1.21.3-3) ... Setting up libglx-mesa0:arm64 (24.2.7-1) ... Setting up libglx0:arm64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:arm64 (0.40.0-4+b3) ... Setting up libhdf5-hl-fortran-100t64:arm64 (1.10.10+repack-4) ... Setting up python3 (3.12.7-1) ... Setting up libkrb5-dev:arm64 (1.21.3-3) ... Setting up python3-packaging (24.2-1) ... Setting up libgl1:arm64 (1.7.0-1+b2) ... Setting up libcurl4-openssl-dev:arm64 (8.11.0-1) ... Setting up libhdf5-dev (1.10.10+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglx-dev:arm64 (1.7.0-1+b2) ... Setting up libgl-dev:arm64 (1.7.0-1+b2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libgio-2.0-dev-bin (2.82.2-3) ... Setting up libegl-dev:arm64 (1.7.0-1+b2) ... Setting up libepoxy-dev:arm64 (1.5.10-2) ... Setting up libcbf-dev:arm64 (0.9.7+dfsg1-4+b1) ... Setting up libgtk-3-0t64:arm64 (3.24.43-4) ... Setting up libgles-dev:arm64 (1.7.0-1+b2) ... Setting up libglib2.0-dev-bin (2.82.2-3) ... Setting up gir1.2-gtk-3.0:arm64 (3.24.43-4) ... Setting up libglvnd-dev:arm64 (1.7.0-1+b2) ... Setting up libvte-2.91-0:arm64 (0.78.1-1) ... Setting up libglib2.0-dev:arm64 (2.82.2-3) ... Setting up libcairo2-dev:arm64 (1.18.2-2) ... Setting up gir1.2-vte-2.91:arm64 (0.78.1-1) ... Setting up libatk1.0-dev:arm64 (2.54.0-1) ... Setting up libegl1-mesa-dev:arm64 (24.2.7-1) ... Setting up libgdk-pixbuf-2.0-dev:arm64 (2.42.12+dfsg-1+b1) ... Setting up libharfbuzz-dev:arm64 (10.0.1-1) ... Setting up libcloudproviders-dev:arm64 (0.3.6-1+b1) ... Setting up libpango1.0-dev:arm64 (1.54.0+ds-3) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (257~rc2-3) ... Processing triggers for sgml-base (1.31) ... Setting up libdbus-1-dev:arm64 (1.14.10-6) ... Setting up libatspi2.0-dev:arm64 (2.54.0-1) ... Setting up libatk-bridge2.0-dev:arm64 (2.54.0-1) ... Setting up libgtk-3-dev:arm64 (3.24.43-4) ... Setting up libvte-2.91-dev:arm64 (0.78.1-1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/rasmol-2.7.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../rasmol_2.7.6.0-3_source.changes dpkg-buildpackage: info: source package rasmol dpkg-buildpackage: info: source version 2.7.6.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh_testdir dh_testroot if [ -f src/Makefile ] ; then /usr/bin/make -C src distclean ; fi rm -f src/rasmol-gtk src/rasmol.32 src/rasmol.16 src/rasmol.8 rm -f src/gtkui.h rm -f manualA4.pdf refcardA4.pdf rm -f x11-stamp dh clean dh_clean debian/rules binary dh_testdir rm -f x11-stamp cd /build/reproducible-path/rasmol-2.7.6.0/src ; xmkmf '-DGTKWIN -DGTK3 -Uvector' ; cd /build/reproducible-path/rasmol-2.7.6.0 imake -DGTKWIN -DGTK3 -Uvector -DUseInstalled -I/usr/lib/X11/config /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' mkdir -p -v ../external_packages mkdir: created directory '../external_packages' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ echo "/* Automatically generated GTK ui definitions, do not edit! */" > gtkui.h echo >> gtkui.h echo "const gchar *actionmenu_str = \"\\" >> gtkui.h cat actionmenu.gtk | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *sizechooser_str = \"\\" >> gtkui.h gtk-builder-convert -w sizechooser.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: 1: gtk-builder-convert: not found echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *print_resolution_str = \"\\" >> gtkui.h gtk-builder-convert -w printing-resolution.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: 1: gtk-builder-convert: not found echo "\";" >> gtkui.h echo >> gtkui.h gdk-pixbuf-csource --name=rasmol_icon --struct rasmol_48x48.xpm >> gtkui.h gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gtkwin.o gtkwin.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from gtkwin.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/include/glib-2.0/glib.h:64, from /usr/include/vte-2.91/vte/vte.h:20, from gtkwin.c:87: gtkwin.c: In function 'build_exportdialog': gtkwin.c:555:19: warning: too many arguments for format [-Wformat-extra-args] 555 | g_message("building size chooser failed: s", err->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:358:32: note: in definition of macro 'g_message' 358 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'build_gtkmenu': gtkwin.c:1297:19: warning: too many arguments for format [-Wformat-extra-args] 1297 | g_message("building menus failed: s", error->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:358:32: note: in definition of macro 'g_message' 358 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'UpdateGtkMoleculeList': gtkwin.c:1233:32: warning: '%d' directive output may be truncated writing between 1 and 10 bytes into a region of size 3 [-Wformat-truncation=] 1233 | snprintf(itemname, 3, "%d", i); | ^~ gtkwin.c:1233:31: note: directive argument in the range [0, 2147483646] 1233 | snprintf(itemname, 3, "%d", i); | ^~~~ In file included from /usr/include/stdio.h:970, from gtkwin.c:82: In function 'snprintf', inlined from 'UpdateGtkMoleculeList' at gtkwin.c:1233:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 3 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o eggfileformatchooser.o eggfileformatchooser.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/limits.h:210, from /usr/lib/gcc/aarch64-linux-gnu/14/include/syslimits.h:7, from /usr/lib/gcc/aarch64-linux-gnu/14/include/limits.h:34, from /usr/lib/aarch64-linux-gnu/glib-2.0/include/glibconfig.h:11, from /usr/include/glib-2.0/glib/gtypes.h:34, from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gtk-3.0/gdk/gdkconfig.h:8, from /usr/include/gtk-3.0/gdk/gdk.h:30, from /usr/include/gtk-3.0/gtk/gtk.h:30, from eggfileformatchooser.h:22, from eggfileformatchooser.c:19: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ eggfileformatchooser.c: In function 'egg_file_format_chooser_init': eggfileformatchooser.c:344:13: warning: Deprecated pre-processor symbol: replace with "G_ADD_PRIVATE" 344 | EggFileFormatChooserPrivate); | ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o gtkwin.o eggfileformatchooser.o -lm -lXext -lX11 -lvte-2.91 -lgio-2.0 -lgtk-3 -lpango-1.0 -lcairo -lgdk_pixbuf-2.0 -lgobject-2.0 -lglib-2.0 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree ln -s ../doc/rasmol.1 rasmol.man rm -f rasmol._man if test -z "true" ; then \ cd `dirname rasmol` && \ ln -s `basename rasmol.man` `basename rasmol._man`; \ else \ cpp -undef -traditional -D__apploaddir__=/etc/X11/app-defaults -D__filemansuffix__=5x -D__osfilemansuffix__=5 -D__libmansuffix__=3x -D__oslibmansuffix__=3 -D__mansuffix__=1x -D__osmansuffix__=1 -D__syscallmansuffix__=2x -D__ossysmansuffix__=2 -D__gamemansuffix__=6x -D__osgamemansuffix__=6 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__admmansuffix__=8x -D__osadmmansuffix__=8 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__drivermansuffix__=4x -D__osdrivermansuffix__=4 -D__adminmansuffix__=8 -D__projectroot__=/usr -D__xconfigfile__=xorg.conf -D__xconfigdir__=/usr/lib/X11 -D__xlogfile__=Xorg -D__xservername__=Xorg -D__appmansuffix__=1x -D__xorgversion__="\"`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'`\" \"X Version 11\"" -D__vendorversion__="`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'` X.Org" \ < rasmol.man | sed -e '/^# *[0-9][0-9]* *.*$/d' -e '/^#line *[0-9][0-9]* *.*$/d' -e '/^[ ]*XCOMM$/s/XCOMM/#/' -e '/^[ ]*XCOMM[^a-zA-Z0-9_]/s/XCOMM/#/' -e '/^[ ]*XHASH/s/XHASH/#/' -e '/\@\@$/s/\@\@$/\\/' >rasmol._man; \ fi make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol-gtk cd /build/reproducible-path/rasmol-2.7.6.0/src ; xmkmf '-DX11WIN -Uvector' ; cd /build/reproducible-path/rasmol-2.7.6.0 mv -f Makefile Makefile.bak imake -DX11WIN -Uvector -DUseInstalled -I/usr/lib/X11/config In file included from /usr/lib/X11/config/Imake.tmpl:2293, from Imakefile.c:34: /tmp/IIf.nBS1zl:125: warning: "X11WIN" redefined 125 | #define X11WIN :2: note: this is the location of the previous definition touch x11-stamp dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DEIGHTBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 124 into destination object 'ScaleRef' of size 120 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 126 into destination object 'ScaleRef' of size 120 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.8 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DSIXTEENBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.16 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DTHIRTYTWOBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.32 dh binary-arch --with bash-completion debian/rules build-arch make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' make[1]: Nothing to be done for 'build-arch'. make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_prep -a debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installdocs -a debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installman -a dh_bash-completion -a dh_installmime -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'rasmol' in '../rasmol_2.7.6.0-3_arm64.deb'. dpkg-deb: building package 'rasmol-dbgsym' in '../rasmol-dbgsym_2.7.6.0-3_arm64.deb'. dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf dh binary-indep debian/rules build-indep make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_prep -i debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installdocs -i debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installman -i dh_perl -i dh_link -i dh_strip_nondeterminism -i debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_fixperms -i dh_missing -i dh_installdeb -i dh_gencontrol -i dh_md5sums -i dh_builddeb -i dpkg-deb: building package 'rasmol-doc' in '../rasmol-doc_2.7.6.0-3_all.deb'. dpkg-genbuildinfo --build=binary -O../rasmol_2.7.6.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../rasmol_2.7.6.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3479771 and its subdirectories I: Current time: Thu Dec 25 08:57:06 -12 2025 I: pbuilder-time-stamp: 1766696226 Thu Dec 25 20:57:06 UTC 2025 I: Signing ./b1/rasmol_2.7.6.0-3_arm64.buildinfo as rasmol_2.7.6.0-3_arm64.buildinfo.asc Thu Dec 25 20:57:06 UTC 2025 I: Signed ./b1/rasmol_2.7.6.0-3_arm64.buildinfo as ./b1/rasmol_2.7.6.0-3_arm64.buildinfo.asc Thu Dec 25 20:57:06 UTC 2025 - build #1 for rasmol/unstable/arm64 on codethink03-arm64 done. Starting cleanup. All cleanup done. Thu Dec 25 20:57:06 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-ymtRMVkp, removing. /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 14:34 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 14:29 b2 -rw-r--r-- 1 jenkins jenkins 2163 Jul 29 2022 rasmol_2.7.6.0-3.dsc -rw------- 1 jenkins jenkins 3275 Nov 22 14:29 rbuildlog.9tSal5l /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1: total 5128 -rw-r--r-- 1 jenkins jenkins 328421 Nov 22 14:34 build.log -rw-r--r-- 1 jenkins jenkins 2845168 Nov 22 14:34 rasmol-dbgsym_2.7.6.0-3_arm64.deb -rw-r--r-- 1 jenkins jenkins 1247244 Nov 22 14:34 rasmol-doc_2.7.6.0-3_all.deb -rw-r--r-- 1 jenkins jenkins 75336 Nov 22 14:34 rasmol_2.7.6.0-3.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2163 Nov 22 14:34 rasmol_2.7.6.0-3.dsc -rw-r--r-- 1 jenkins jenkins 15898 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 16780 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1702 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.changes -rw-r--r-- 1 jenkins jenkins 693952 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.deb -rw-r--r-- 1 jenkins jenkins 1247 Nov 22 14:34 rasmol_2.7.6.0-3_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2: total 0 Fri Nov 22 14:34:08 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 08:53:01 -12 2025 I: pbuilder-time-stamp: 1766695981 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [rasmol_2.7.6.0-3.dsc] I: copying [./rasmol_2.7.6.0.orig.tar.gz] I: copying [./rasmol_2.7.6.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Jul 29 08:46:21 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./rasmol_2.7.6.0-3.dsc: no acceptable signature found dpkg-source: info: extracting rasmol in rasmol-2.7.6.0 dpkg-source: info: unpacking rasmol_2.7.6.0.orig.tar.gz dpkg-source: info: unpacking rasmol_2.7.6.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_imakefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3479771/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='1416b92af52f424da970949375479627' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3479771' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_qnVE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1 --logfile b1/build.log rasmol_2.7.6.0-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3479771/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), bash-completion, xutils-dev, libx11-dev, libxext-dev, libxi-dev, x11proto-core-dev, libvte-2.91-dev, libgtk-3-dev, libcbf-dev, libcvector-dev, libcqrlib-dev, libcneartree-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on xutils-dev; however: Package xutils-dev is not installed. pbuilder-satisfydepends-dummy depends on libx11-dev; however: Package libx11-dev is not installed. pbuilder-satisfydepends-dummy depends on libxext-dev; however: Package libxext-dev is not installed. pbuilder-satisfydepends-dummy depends on libxi-dev; however: Package libxi-dev is not installed. pbuilder-satisfydepends-dummy depends on x11proto-core-dev; however: Package x11proto-core-dev is not installed. pbuilder-satisfydepends-dummy depends on libvte-2.91-dev; however: Package libvte-2.91-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtk-3-dev; however: Package libgtk-3-dev is not installed. pbuilder-satisfydepends-dummy depends on libcbf-dev; however: Package libcbf-dev is not installed. pbuilder-satisfydepends-dummy depends on libcvector-dev; however: Package libcvector-dev is not installed. pbuilder-satisfydepends-dummy depends on libcqrlib-dev; however: Package libcqrlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libcneartree-dev; however: Package libcneartree-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdextrautils{a} comerr-dev{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gir1.2-atk-1.0{a} gir1.2-atspi-2.0{a} gir1.2-cloudproviders-0.3.0{a} gir1.2-freedesktop{a} gir1.2-freedesktop-dev{a} gir1.2-gdkpixbuf-2.0{a} gir1.2-glib-2.0{a} gir1.2-glib-2.0-dev{a} gir1.2-gtk-3.0{a} gir1.2-harfbuzz-0.0{a} gir1.2-pango-1.0{a} gir1.2-vte-2.91{a} girepository-tools{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libapparmor1{a} libarchive-zip-perl{a} libatk-bridge2.0-0t64{a} libatk-bridge2.0-dev{a} libatk1.0-0t64{a} libatk1.0-dev{a} libatspi2.0-0t64{a} libatspi2.0-dev{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblkid-dev{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libcbf-dev{a} libcbf1t64{a} libcloudproviders-dev{a} libcloudproviders0{a} libcneartree-dev{a} libcneartree7t64{a} libcolord2{a} libcom-err2{a} libcqrlib-dev{a} libcqrlib2{a} libcups2t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcvector-dev{a} libcvector2{a} libdatrie-dev{a} libdatrie1{a} libdbus-1-3{a} libdbus-1-dev{a} libdconf1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libegl1-mesa-dev{a} libelf1t64{a} libepoxy-dev{a} libepoxy0{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfreetype-dev{a} libfreetype6{a} libfribidi-dev{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf-2.0-dev{a} libgdk-pixbuf2.0-bin{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgio-2.0-dev{a} libgio-2.0-dev-bin{a} libgirepository-2.0-0{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgraphite2-dev{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgtk-3-0t64{a} libgtk-3-common{a} libgtk-3-dev{a} libharfbuzz-cairo0{a} libharfbuzz-dev{a} libharfbuzz-gobject0{a} libharfbuzz-icu0{a} libharfbuzz-subset0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libice-dev{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} liblerc-dev{a} liblerc4{a} libllvm19{a} liblzma-dev{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libmount-dev{a} libnghttp2-14{a} libnghttp2-dev{a} libnsl2{a} libopengl-dev{a} libopengl0{a} libp11-kit-dev{a} libpam-systemd{a} libpango-1.0-0{a} libpango1.0-dev{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpangoxft-1.0-0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm-dev{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsysprof-capture-4-dev{a} libsystemd-shared{a} libsz2{a} libtasn1-6-dev{a} libthai-data{a} libthai-dev{a} libthai0{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunbound8{a} libvte-2.91-0{a} libvte-2.91-common{a} libvte-2.91-dev{a} libvulkan1{a} libwayland-bin{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-dev{a} libwayland-egl1{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxcomposite-dev{a} libxcomposite1{a} libxcursor-dev{a} libxcursor1{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi-dev{a} libxi6{a} libxinerama-dev{a} libxinerama1{a} libxkbcommon-dev{a} libxkbcommon0{a} libxml2{a} libxrandr-dev{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence1{a} libxtst-dev{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} native-architecture{a} netbase{a} nettle-dev{a} pango1.0-tools{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3-packaging{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} systemd{a} systemd-sysv{a} tzdata{a} uuid-dev{a} wayland-protocols{a} x11-common{a} x11proto-dev{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} xutils-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core bzip2-doc ca-certificates chrony curl krb5-locales libarchive-cpio-perl libgtk-3-bin libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libpng-tools librsvg2-common libsasl2-modules libtasn1-doc libvte-2.91-doc linux-sysctl-defaults lynx mesa-vulkan-drivers ntpsec openntpd psmisc publicsuffix systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 354 newly installed, 0 to remove and 0 not upgraded. Need to get 146 MB of archives. After unpacking 672 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libapparmor1 arm64 3.1.7-1+b3 [41.8 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libsystemd-shared arm64 257~rc2-3 [1902 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 systemd arm64 257~rc2-3 [3360 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 systemd-sysv arm64 257~rc2-3 [59.3 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.14.10-6 [196 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 dbus-bin arm64 1.14.10-6 [105 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 dbus-daemon arm64 1.14.10-6 [178 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 dbus arm64 1.14.10-6 [97.4 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-3 [255 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.7-3 [671 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B] Get: 32 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 sgml-base all 1.31 [15.4 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 bash-completion all 1:2.14.0-2 [310 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libpam-systemd arm64 257~rc2-3 [270 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b1 [755 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.4.0-0.1+b1 [112 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.4.0-0.1+b1 [268 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1+b1 [131 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 gtk-update-icon-cache arm64 4.16.5+ds-2 [49.9 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 at-spi2-common all 2.54.0-1 [170 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.1-1+b1 [55.1 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 dbus-user-session arm64 1.14.10-6 [79.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libdconf1 arm64 0.40.0-4+b3 [40.4 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 dconf-service arm64 0.40.0-4+b3 [31.1 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 dconf-gsettings-backend arm64 0.40.0-4+b3 [27.4 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 82 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-1.1+b1 [318 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-1.1+b1 [387 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-1.1+b1 [463 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 gir1.2-glib-2.0 arm64 2.82.2-3 [193 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [49.7 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 gir1.2-atk-1.0 arm64 2.54.0-1 [25.5 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b2 [27.2 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.2-2 [483 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libcairo-gobject2 arm64 1.18.2-2 [130 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 gir1.2-freedesktop arm64 1.82.0-2 [59.7 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [72.9 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 gir1.2-atspi-2.0 arm64 2.54.0-1 [22.9 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libcloudproviders0 arm64 0.3.6-1+b1 [27.7 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 gir1.2-cloudproviders-0.3.0 arm64 0.3.6-1+b1 [7340 B] Get: 116 http://deb.debian.org/debian unstable/main arm64 gir1.2-glib-2.0-dev arm64 2.82.2-3 [903 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 gir1.2-freedesktop-dev arm64 1.82.0-2 [50.8 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 gir1.2-gdkpixbuf-2.0 arm64 2.42.12+dfsg-1+b1 [14.3 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-gobject0 arm64 10.0.1-1 [32.0 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 gir1.2-harfbuzz-0.0 arm64 10.0.1-1 [41.8 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [210 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [51.8 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [33.5 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 libxft2 arm64 2.3.6-1+b2 [51.6 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 libpangoxft-1.0-0 arm64 1.54.0+ds-3 [26.8 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 gir1.2-pango-1.0 arm64 1.54.0+ds-3 [38.6 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [64.4 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 libcolord2 arm64 1.4.7-1+b2 [130 kB] Get: 136 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-13+b3 [112 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-13+b3 [42.3 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-13+b3 [46.0 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.10-2 [235 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.23.0-1+b1 [26.0 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.23.0-1+b1 [11.5 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.23.0-1+b1 [5768 B] Get: 144 http://deb.debian.org/debian unstable/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b2 [20.5 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.2-1+b1 [37.1 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b2 [16.1 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.7.0-1 [106 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b1 [36.0 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 libgtk-3-0t64 arm64 3.24.43-4 [2546 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 gir1.2-gtk-3.0 arm64 3.24.43-4 [223 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-common arm64 0.78.1-1 [689 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-0 arm64 0.78.1-1 [883 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 gir1.2-vte-2.91 arm64 0.78.1-1 [652 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 native-architecture all 0.2.3 [2108 B] Get: 159 http://deb.debian.org/debian unstable/main arm64 libgirepository-2.0-0 arm64 2.82.2-3 [130 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 girepository-tools arm64 2.82.2-3 [134 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.10.10+repack-4 [23.5 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 icu-devtools arm64 72.1-5+b1 [195 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-3 [56.7 kB] Get: 164 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-3 [40.3 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-3 [40.8 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-3 [52.2 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-3 [126 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 170 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 libffi-dev arm64 3.4.6-1 [57.0 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 uuid-dev arm64 2.40.2-11 [47.8 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 libblkid-dev arm64 2.40.2-11 [208 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 libsepol-dev arm64 3.7-1 [354 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.44-4 [230 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.44-4 [220 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 libpcre2-posix3 arm64 10.44-4 [60.4 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 libpcre2-dev arm64 10.44-4 [704 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 libselinux1-dev arm64 3.7-3+b1 [164 kB] Get: 183 http://deb.debian.org/debian unstable/main arm64 libmount-dev arm64 2.40.2-11 [28.9 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 libsysprof-capture-4-dev arm64 47.1-1 [49.1 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 libgio-2.0-dev arm64 2.82.2-3 [1691 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 libglib2.0-data all 2.82.2-3 [1275 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 libglib2.0-bin arm64 2.82.2-3 [123 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.2-1 [55.3 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 libgio-2.0-dev-bin arm64 2.82.2-3 [162 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev-bin arm64 2.82.2-3 [51.5 kB] Get: 192 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev arm64 2.82.2-3 [52.3 kB] Get: 193 http://deb.debian.org/debian unstable/main arm64 libatk1.0-dev arm64 2.54.0-1 [106 kB] Get: 194 http://deb.debian.org/debian unstable/main arm64 xml-core all 0.19 [20.1 kB] Get: 195 http://deb.debian.org/debian unstable/main arm64 libdbus-1-dev arm64 1.14.10-6 [244 kB] Get: 196 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+23.1 [216 kB] Get: 197 http://deb.debian.org/debian unstable/main arm64 libxtst6 arm64 2:1.2.3-1.1+b2 [26.0 kB] Get: 198 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 199 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2024.1-1 [603 kB] Get: 200 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB] Get: 201 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-1 [44.2 kB] Get: 202 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 203 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB] Get: 204 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.10-2 [877 kB] Get: 205 http://deb.debian.org/debian unstable/main arm64 libxext-dev arm64 2:1.3.4-1+b2 [105 kB] Get: 206 http://deb.debian.org/debian unstable/main arm64 libxfixes-dev arm64 1:6.0.0-2+b2 [22.8 kB] Get: 207 http://deb.debian.org/debian unstable/main arm64 libxi-dev arm64 2:1.8.2-1 [240 kB] Get: 208 http://deb.debian.org/debian unstable/main arm64 libxtst-dev arm64 2:1.2.3-1.1+b2 [30.4 kB] Get: 209 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-dev arm64 2.54.0-1 [81.8 kB] Get: 210 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-dev arm64 2.54.0-1 [9740 B] Get: 211 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b6 [308 kB] Get: 212 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB] Get: 213 http://deb.debian.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b1 [49.6 kB] Get: 214 http://deb.debian.org/debian unstable/main arm64 libcairo-script-interpreter2 arm64 1.18.2-2 [57.4 kB] Get: 215 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.6.4-1 [143 kB] Get: 216 http://deb.debian.org/debian unstable/main arm64 libpng-dev arm64 1.6.44-2 [360 kB] Get: 217 http://deb.debian.org/debian unstable/main arm64 libfreetype-dev arm64 2.13.3+dfsg-1 [600 kB] Get: 218 http://deb.debian.org/debian unstable/main arm64 libfontconfig-dev arm64 2.15.0-1.1+b1 [411 kB] Get: 219 http://deb.debian.org/debian unstable/main arm64 libpixman-1-dev arm64 0.44.0-3 [11.4 kB] Get: 220 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Get: 221 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB] Get: 222 http://deb.debian.org/debian unstable/main arm64 libice-dev arm64 2:1.1.1-1 [73.0 kB] Get: 223 http://deb.debian.org/debian unstable/main arm64 libsm-dev arm64 2:1.2.4-1 [38.0 kB] Get: 224 http://deb.debian.org/debian unstable/main arm64 libxcb-render0-dev arm64 1.17.0-2+b1 [119 kB] Get: 225 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0-dev arm64 1.17.0-2+b1 [108 kB] Get: 226 http://deb.debian.org/debian unstable/main arm64 libxrender-dev arm64 1:0.9.10-1.1+b2 [35.7 kB] Get: 227 http://deb.debian.org/debian unstable/main arm64 libcairo2-dev arm64 1.18.2-2 [43.0 kB] Get: 228 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 229 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 230 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 231 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 232 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 233 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 234 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 235 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 236 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB] Get: 237 http://deb.debian.org/debian unstable/main arm64 libcbf1t64 arm64 0.9.7+dfsg1-4+b1 [332 kB] Get: 238 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB] Get: 239 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-4 [88.1 kB] Get: 240 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB] Get: 241 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.0 kB] Get: 242 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB] Get: 243 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB] Get: 244 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB] Get: 245 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB] Get: 246 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB] Get: 247 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-3 [15.8 kB] Get: 248 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.5.18+dfsg-3+b1 [300 kB] Get: 249 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB] Get: 250 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Get: 251 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 252 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB] Get: 253 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 254 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1 [553 kB] Get: 255 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.8-2 [446 kB] Get: 256 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.8-2 [446 kB] Get: 257 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB] Get: 258 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB] Get: 259 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB] Get: 260 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.8-2 [1404 kB] Get: 261 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB] Get: 262 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB] Get: 263 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Get: 264 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB] Get: 265 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.11.0-1 [447 kB] Get: 266 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.10.10+repack-4 [2697 kB] Get: 267 http://deb.debian.org/debian unstable/main arm64 libcbf-dev arm64 0.9.7+dfsg1-4+b1 [438 kB] Get: 268 http://deb.debian.org/debian unstable/main arm64 libcloudproviders-dev arm64 0.3.6-1+b1 [17.5 kB] Get: 269 http://deb.debian.org/debian unstable/main arm64 libcvector2 arm64 1.0.4.1-2+b2 [6148 B] Get: 270 http://deb.debian.org/debian unstable/main arm64 libcneartree7t64 arm64 5.1.1+dfsg1-2.1+b1 [25.9 kB] Get: 271 http://deb.debian.org/debian unstable/main arm64 libcneartree-dev arm64 5.1.1+dfsg1-2.1+b1 [78.2 kB] Get: 272 http://deb.debian.org/debian unstable/main arm64 libcqrlib2 arm64 1.1.4-3+b2 [12.1 kB] Get: 273 http://deb.debian.org/debian unstable/main arm64 libcqrlib-dev arm64 1.1.4-3+b2 [25.0 kB] Get: 274 http://deb.debian.org/debian unstable/main arm64 libcvector-dev arm64 1.0.4.1-2+b2 [9920 B] Get: 275 http://deb.debian.org/debian unstable/main arm64 libdatrie-dev arm64 0.2.13-3+b1 [18.5 kB] Get: 276 http://deb.debian.org/debian unstable/main arm64 libdeflate-dev arm64 1.22-1 [51.2 kB] Get: 277 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B] Get: 278 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB] Get: 279 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB] Get: 280 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.123-1 [21.3 kB] Get: 281 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB] Get: 282 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB] Get: 283 http://deb.debian.org/debian unstable/main arm64 libwayland-server0 arm64 1.23.0-1+b1 [33.4 kB] Get: 284 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB] Get: 285 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.2.7-1 [48.0 kB] Get: 286 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 287 http://deb.debian.org/debian unstable/main arm64 libllvm19 arm64 1:19.1.3-2 [23.3 MB] Get: 288 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 289 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB] Get: 290 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [241 kB] Get: 291 http://deb.debian.org/debian unstable/main arm64 libxcb-dri2-0 arm64 1.17.0-2+b1 [107 kB] Get: 292 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB] Get: 293 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB] Get: 294 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB] Get: 295 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB] Get: 296 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b2 [9076 B] Get: 297 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 24.2.7-1 [7687 kB] Get: 298 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 24.2.7-1 [42.0 kB] Get: 299 http://deb.debian.org/debian unstable/main arm64 libegl-mesa0 arm64 24.2.7-1 [124 kB] Get: 300 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-1+b2 [34.0 kB] Get: 301 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB] Get: 302 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b3 [19.2 kB] Get: 303 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.296.0-1 [123 kB] Get: 304 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.2.7-1 [43.6 kB] Get: 305 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.2.7-1 [153 kB] Get: 306 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB] Get: 307 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB] Get: 308 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-1+b2 [15.8 kB] Get: 309 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-1+b2 [101 kB] Get: 310 http://deb.debian.org/debian unstable/main arm64 libegl-dev arm64 1.7.0-1+b2 [19.5 kB] Get: 311 http://deb.debian.org/debian unstable/main arm64 libglvnd-core-dev arm64 1.7.0-1+b2 [13.4 kB] Get: 312 http://deb.debian.org/debian unstable/main arm64 libgles1 arm64 1.7.0-1+b2 [12.6 kB] Get: 313 http://deb.debian.org/debian unstable/main arm64 libgles2 arm64 1.7.0-1+b2 [18.0 kB] Get: 314 http://deb.debian.org/debian unstable/main arm64 libgles-dev arm64 1.7.0-1+b2 [50.8 kB] Get: 315 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-1+b2 [32.1 kB] Get: 316 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-1+b2 [5376 B] Get: 317 http://deb.debian.org/debian unstable/main arm64 libglvnd-dev arm64 1.7.0-1+b2 [5144 B] Get: 318 http://deb.debian.org/debian unstable/main arm64 libegl1-mesa-dev arm64 24.2.7-1 [22.7 kB] Get: 319 http://deb.debian.org/debian unstable/main arm64 libepoxy-dev arm64 1.5.10-2 [127 kB] Get: 320 http://deb.debian.org/debian unstable/main arm64 libfribidi-dev arm64 1.0.15-1 [111 kB] Get: 321 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-bin arm64 2.42.12+dfsg-1+b1 [19.0 kB] Get: 322 http://deb.debian.org/debian unstable/main arm64 libjbig-dev arm64 2.1-6.1+b2 [30.5 kB] Get: 323 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.6.3-1+b1 [312 kB] Get: 324 http://deb.debian.org/debian unstable/main arm64 libwebpdemux2 arm64 1.4.0-0.1+b1 [110 kB] Get: 325 http://deb.debian.org/debian unstable/main arm64 libwebpmux3 arm64 1.4.0-0.1+b1 [122 kB] Get: 326 http://deb.debian.org/debian unstable/main arm64 libwebpdecoder3 arm64 1.4.0-0.1+b1 [179 kB] Get: 327 http://deb.debian.org/debian unstable/main arm64 libsharpyuv-dev arm64 1.4.0-0.1+b1 [115 kB] Get: 328 http://deb.debian.org/debian unstable/main arm64 libwebp-dev arm64 1.4.0-0.1+b1 [400 kB] Get: 329 http://deb.debian.org/debian unstable/main arm64 libtiffxx6 arm64 4.5.1+git230720-5 [149 kB] Get: 330 http://deb.debian.org/debian unstable/main arm64 liblerc-dev arm64 4.0.0+ds-5 [164 kB] Get: 331 http://deb.debian.org/debian unstable/main arm64 libtiff-dev arm64 4.5.1+git230720-5 [451 kB] Get: 332 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-dev arm64 2.42.12+dfsg-1+b1 [52.7 kB] Get: 333 http://deb.debian.org/debian unstable/main arm64 libgraphite2-dev arm64 1.3.14-2+b1 [20.3 kB] Get: 334 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-icu0 arm64 10.0.1-1 [15.3 kB] Get: 335 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-subset0 arm64 10.0.1-1 [507 kB] Get: 336 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-cairo0 arm64 10.0.1-1 [41.9 kB] Get: 337 http://deb.debian.org/debian unstable/main arm64 libicu-dev arm64 72.1-5+b1 [10.3 MB] Get: 338 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-dev arm64 10.0.1-1 [145 kB] Get: 339 http://deb.debian.org/debian unstable/main arm64 libthai-dev arm64 0.1.29-2+b1 [24.0 kB] Get: 340 http://deb.debian.org/debian unstable/main arm64 libxft-dev arm64 2.3.6-1+b2 [72.0 kB] Get: 341 http://deb.debian.org/debian unstable/main arm64 pango1.0-tools arm64 1.54.0+ds-3 [41.1 kB] Get: 342 http://deb.debian.org/debian unstable/main arm64 libpango1.0-dev arm64 1.54.0+ds-3 [154 kB] Get: 343 http://deb.debian.org/debian unstable/main arm64 libwayland-bin arm64 1.23.0-1+b1 [20.5 kB] Get: 344 http://deb.debian.org/debian unstable/main arm64 libwayland-dev arm64 1.23.0-1+b1 [73.6 kB] Get: 345 http://deb.debian.org/debian unstable/main arm64 libxcomposite-dev arm64 1:0.4.6-1 [20.2 kB] Get: 346 http://deb.debian.org/debian unstable/main arm64 libxcursor-dev arm64 1:1.2.2-1+b1 [49.3 kB] Get: 347 http://deb.debian.org/debian unstable/main arm64 libxdamage-dev arm64 1:1.1.6-1+b2 [15.5 kB] Get: 348 http://deb.debian.org/debian unstable/main arm64 libxinerama-dev arm64 2:1.1.4-3+b2 [18.4 kB] Get: 349 http://deb.debian.org/debian unstable/main arm64 libxkbcommon-dev arm64 1.7.0-1 [53.6 kB] Get: 350 http://deb.debian.org/debian unstable/main arm64 libxrandr-dev arm64 2:1.5.4-1+b1 [44.5 kB] Get: 351 http://deb.debian.org/debian unstable/main arm64 wayland-protocols all 1.38-1 [102 kB] Get: 352 http://deb.debian.org/debian unstable/main arm64 libgtk-3-dev arm64 3.24.43-4 [1128 kB] Get: 353 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-dev arm64 0.78.1-1 [691 kB] Get: 354 http://deb.debian.org/debian unstable/main arm64 xutils-dev arm64 1:7.7+7 [239 kB] Fetched 146 MB in 1s (116 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b3_arm64.deb ... Unpacking libapparmor1:arm64 (3.1.7-1+b3) ... Selecting previously unselected package libsystemd-shared:arm64. Preparing to unpack .../libsystemd-shared_257~rc2-3_arm64.deb ... Unpacking libsystemd-shared:arm64 (257~rc2-3) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_257~rc2-3_arm64.deb ... Unpacking systemd (257~rc2-3) ... Setting up libapparmor1:arm64 (3.1.7-1+b3) ... Setting up libsystemd-shared:arm64 (257~rc2-3) ... Setting up systemd (257~rc2-3) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21040 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_257~rc2-3_arm64.deb ... Unpacking systemd-sysv (257~rc2-3) ... Selecting previously unselected package libdbus-1-3:arm64. Preparing to unpack .../1-libdbus-1-3_1.14.10-6_arm64.deb ... Unpacking libdbus-1-3:arm64 (1.14.10-6) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../2-dbus-bin_1.14.10-6_arm64.deb ... 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Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libcneartree7t64:arm64 (5.1.1+dfsg1-2.1+b1) ... Setting up libwayland-egl1:arm64 (1.23.0-1+b1) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libopengl-dev:arm64 (1.7.0-1+b2) ... Setting up dbus-system-bus-common (1.14.10-6) ... useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Setting up libsharpyuv-dev:arm64 (1.4.0-0.1+b1) ... Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ... Setting up libwebpmux3:arm64 (1.4.0-0.1+b1) ... Setting up libtiffxx6:arm64 (4.5.1+git230720-5) ... Setting up libdeflate-dev:arm64 (1.22-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxcomposite1:arm64 (1:0.4.6-1) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:arm64 (72.1-5+b1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up dbus-bin (1.14.10-6) ... Setting up libbrotli-dev:arm64 (1.1.0-2+b6) ... 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Setting up libgnutls28-dev:arm64 (3.8.8-2) ... Setting up gtk-update-icon-cache (4.16.5+ds-2) ... Setting up libnghttp2-dev:arm64 (1.64.0-1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:arm64 (2.3.6-1+b2) ... Setting up libgio-2.0-dev:arm64 (2.82.2-3) ... Setting up libharfbuzz-icu0:arm64 (10.0.1-1) ... Setting up girepository-tools:arm64 (2.82.2-3) ... Setting up libxcb1-dev:arm64 (1.17.0-2+b1) ... Setting up libxi6:arm64 (2:1.8.2-1) ... Setting up gir1.2-gdkpixbuf-2.0:arm64 (2.42.12+dfsg-1+b1) ... Setting up libcurl4t64:arm64 (8.11.0-1) ... Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Setting up libsm-dev:arm64 (2:1.2.4-1) ... Setting up libdrm-radeon1:arm64 (2.4.123-1) ... Setting up libxtst6:arm64 (2:1.2.3-1.1+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxcursor1:arm64 (1:1.2.2-1+b1) ... Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libx11-dev:arm64 (2:1.8.10-2) ... Setting up libharfbuzz-gobject0:arm64 (10.0.1-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libwayland-dev:arm64 (1.23.0-1+b1) ... Setting up libcairo2:arm64 (1.18.2-2) ... Setting up libfreetype-dev:arm64 (2.13.3+dfsg-1) ... Setting up libxfixes-dev:arm64 (1:6.0.0-2+b2) ... Setting up libxcb-shm0-dev:arm64 (1.17.0-2+b1) ... Setting up dbus-user-session (1.14.10-6) ... Setting up libharfbuzz-cairo0:arm64 (10.0.1-1) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgssrpc4t64:arm64 (1.21.3-3) ... Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxcb-render0-dev:arm64 (1.17.0-2+b1) ... 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Setting up libhdf5-dev (1.10.10+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglx-dev:arm64 (1.7.0-1+b2) ... Setting up libgl-dev:arm64 (1.7.0-1+b2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libgio-2.0-dev-bin (2.82.2-3) ... Setting up libegl-dev:arm64 (1.7.0-1+b2) ... Setting up libepoxy-dev:arm64 (1.5.10-2) ... Setting up libcbf-dev:arm64 (0.9.7+dfsg1-4+b1) ... Setting up libgtk-3-0t64:arm64 (3.24.43-4) ... Setting up libgles-dev:arm64 (1.7.0-1+b2) ... Setting up libglib2.0-dev-bin (2.82.2-3) ... Setting up gir1.2-gtk-3.0:arm64 (3.24.43-4) ... Setting up libglvnd-dev:arm64 (1.7.0-1+b2) ... Setting up libvte-2.91-0:arm64 (0.78.1-1) ... Setting up libglib2.0-dev:arm64 (2.82.2-3) ... Setting up libcairo2-dev:arm64 (1.18.2-2) ... Setting up gir1.2-vte-2.91:arm64 (0.78.1-1) ... Setting up libatk1.0-dev:arm64 (2.54.0-1) ... Setting up libegl1-mesa-dev:arm64 (24.2.7-1) ... Setting up libgdk-pixbuf-2.0-dev:arm64 (2.42.12+dfsg-1+b1) ... Setting up libharfbuzz-dev:arm64 (10.0.1-1) ... Setting up libcloudproviders-dev:arm64 (0.3.6-1+b1) ... Setting up libpango1.0-dev:arm64 (1.54.0+ds-3) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (257~rc2-3) ... Processing triggers for sgml-base (1.31) ... Setting up libdbus-1-dev:arm64 (1.14.10-6) ... Setting up libatspi2.0-dev:arm64 (2.54.0-1) ... Setting up libatk-bridge2.0-dev:arm64 (2.54.0-1) ... Setting up libgtk-3-dev:arm64 (3.24.43-4) ... Setting up libvte-2.91-dev:arm64 (0.78.1-1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/rasmol-2.7.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../rasmol_2.7.6.0-3_source.changes dpkg-buildpackage: info: source package rasmol dpkg-buildpackage: info: source version 2.7.6.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh_testdir dh_testroot if [ -f src/Makefile ] ; then /usr/bin/make -C src distclean ; fi rm -f src/rasmol-gtk src/rasmol.32 src/rasmol.16 src/rasmol.8 rm -f src/gtkui.h rm -f manualA4.pdf refcardA4.pdf rm -f x11-stamp dh clean dh_clean debian/rules binary dh_testdir rm -f x11-stamp cd /build/reproducible-path/rasmol-2.7.6.0/src ; xmkmf '-DGTKWIN -DGTK3 -Uvector' ; cd /build/reproducible-path/rasmol-2.7.6.0 imake -DGTKWIN -DGTK3 -Uvector -DUseInstalled -I/usr/lib/X11/config /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' mkdir -p -v ../external_packages mkdir: created directory '../external_packages' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ echo "/* Automatically generated GTK ui definitions, do not edit! */" > gtkui.h echo >> gtkui.h echo "const gchar *actionmenu_str = \"\\" >> gtkui.h cat actionmenu.gtk | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *sizechooser_str = \"\\" >> gtkui.h gtk-builder-convert -w sizechooser.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: 1: gtk-builder-convert: not found echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *print_resolution_str = \"\\" >> gtkui.h gtk-builder-convert -w printing-resolution.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: 1: gtk-builder-convert: not found echo "\";" >> gtkui.h echo >> gtkui.h gdk-pixbuf-csource --name=rasmol_icon --struct rasmol_48x48.xpm >> gtkui.h gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gtkwin.o gtkwin.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from gtkwin.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/include/glib-2.0/glib.h:64, from /usr/include/vte-2.91/vte/vte.h:20, from gtkwin.c:87: gtkwin.c: In function 'build_exportdialog': gtkwin.c:555:19: warning: too many arguments for format [-Wformat-extra-args] 555 | g_message("building size chooser failed: s", err->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:358:32: note: in definition of macro 'g_message' 358 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'build_gtkmenu': gtkwin.c:1297:19: warning: too many arguments for format [-Wformat-extra-args] 1297 | g_message("building menus failed: s", error->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:358:32: note: in definition of macro 'g_message' 358 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'UpdateGtkMoleculeList': gtkwin.c:1233:32: warning: '%d' directive output may be truncated writing between 1 and 10 bytes into a region of size 3 [-Wformat-truncation=] 1233 | snprintf(itemname, 3, "%d", i); | ^~ gtkwin.c:1233:31: note: directive argument in the range [0, 2147483646] 1233 | snprintf(itemname, 3, "%d", i); | ^~~~ In file included from /usr/include/stdio.h:970, from gtkwin.c:82: In function 'snprintf', inlined from 'UpdateGtkMoleculeList' at gtkwin.c:1233:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 3 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o eggfileformatchooser.o eggfileformatchooser.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/limits.h:210, from /usr/lib/gcc/aarch64-linux-gnu/14/include/syslimits.h:7, from /usr/lib/gcc/aarch64-linux-gnu/14/include/limits.h:34, from /usr/lib/aarch64-linux-gnu/glib-2.0/include/glibconfig.h:11, from /usr/include/glib-2.0/glib/gtypes.h:34, from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gtk-3.0/gdk/gdkconfig.h:8, from /usr/include/gtk-3.0/gdk/gdk.h:30, from /usr/include/gtk-3.0/gtk/gtk.h:30, from eggfileformatchooser.h:22, from eggfileformatchooser.c:19: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ eggfileformatchooser.c: In function 'egg_file_format_chooser_init': eggfileformatchooser.c:344:13: warning: Deprecated pre-processor symbol: replace with "G_ADD_PRIVATE" 344 | EggFileFormatChooserPrivate); | ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o gtkwin.o eggfileformatchooser.o -lm -lXext -lX11 -lvte-2.91 -lgio-2.0 -lgtk-3 -lpango-1.0 -lcairo -lgdk_pixbuf-2.0 -lgobject-2.0 -lglib-2.0 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree ln -s ../doc/rasmol.1 rasmol.man rm -f rasmol._man if test -z "true" ; then \ cd `dirname rasmol` && \ ln -s `basename rasmol.man` `basename rasmol._man`; \ else \ cpp -undef -traditional -D__apploaddir__=/etc/X11/app-defaults -D__filemansuffix__=5x -D__osfilemansuffix__=5 -D__libmansuffix__=3x -D__oslibmansuffix__=3 -D__mansuffix__=1x -D__osmansuffix__=1 -D__syscallmansuffix__=2x -D__ossysmansuffix__=2 -D__gamemansuffix__=6x -D__osgamemansuffix__=6 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__admmansuffix__=8x -D__osadmmansuffix__=8 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__drivermansuffix__=4x -D__osdrivermansuffix__=4 -D__adminmansuffix__=8 -D__projectroot__=/usr -D__xconfigfile__=xorg.conf -D__xconfigdir__=/usr/lib/X11 -D__xlogfile__=Xorg -D__xservername__=Xorg -D__appmansuffix__=1x -D__xorgversion__="\"`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'`\" \"X Version 11\"" -D__vendorversion__="`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'` X.Org" \ < rasmol.man | sed -e '/^# *[0-9][0-9]* *.*$/d' -e '/^#line *[0-9][0-9]* *.*$/d' -e '/^[ ]*XCOMM$/s/XCOMM/#/' -e '/^[ ]*XCOMM[^a-zA-Z0-9_]/s/XCOMM/#/' -e '/^[ ]*XHASH/s/XHASH/#/' -e '/\@\@$/s/\@\@$/\\/' >rasmol._man; \ fi make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol-gtk cd /build/reproducible-path/rasmol-2.7.6.0/src ; xmkmf '-DX11WIN -Uvector' ; cd /build/reproducible-path/rasmol-2.7.6.0 mv -f Makefile Makefile.bak imake -DX11WIN -Uvector -DUseInstalled -I/usr/lib/X11/config In file included from /usr/lib/X11/config/Imake.tmpl:2293, from Imakefile.c:34: /tmp/IIf.nBS1zl:125: warning: "X11WIN" redefined 125 | #define X11WIN :2: note: this is the location of the previous definition touch x11-stamp dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DEIGHTBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 124 into destination object 'ScaleRef' of size 120 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 126 into destination object 'ScaleRef' of size 120 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.8 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DSIXTEENBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.16 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DTHIRTYTWOBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.32 dh binary-arch --with bash-completion debian/rules build-arch make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' make[1]: Nothing to be done for 'build-arch'. make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_prep -a debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installdocs -a debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installman -a dh_bash-completion -a dh_installmime -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'rasmol' in '../rasmol_2.7.6.0-3_arm64.deb'. dpkg-deb: building package 'rasmol-dbgsym' in '../rasmol-dbgsym_2.7.6.0-3_arm64.deb'. dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf dh binary-indep debian/rules build-indep make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_prep -i debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installdocs -i debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installman -i dh_perl -i dh_link -i dh_strip_nondeterminism -i debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_fixperms -i dh_missing -i dh_installdeb -i dh_gencontrol -i dh_md5sums -i dh_builddeb -i dpkg-deb: building package 'rasmol-doc' in '../rasmol-doc_2.7.6.0-3_all.deb'. dpkg-genbuildinfo --build=binary -O../rasmol_2.7.6.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../rasmol_2.7.6.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3479771 and its subdirectories I: Current time: Thu Dec 25 08:57:06 -12 2025 I: pbuilder-time-stamp: 1766696226 Fri Nov 22 14:34:09 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink02-arm64.debian.net. Fri Nov 22 14:34:09 UTC 2024 I: Preparing to do remote build '2' on codethink02-arm64.debian.net. Fri Nov 22 14:34:09 UTC 2024 - checking /var/lib/jenkins/offline_nodes if codethink02-arm64.debian.net is marked as down. Fri Nov 22 14:34:09 UTC 2024 - checking via ssh if codethink02-arm64.debian.net is up. removed '/tmp/read-only-fs-test-4GsEwS' ==================================================================================== Fri Nov 22 14:34:11 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on codethink02-arm64, called using "2 rasmol unstable /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m 2.7.6.0-3" as arguments. Fri Nov 22 14:34:11 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-zEBVNiZ3" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 14:34:11 UTC 2024 I: Downloading source for unstable/rasmol=2.7.6.0-3 Reading package lists... NOTICE: 'rasmol' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/rasmol.git Please use: git clone https://salsa.debian.org/science-team/rasmol.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 9893 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (dsc) [2163 B] Get:2 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (tar) [9815 kB] Get:3 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (diff) [75.3 kB] Fetched 9893 kB in 0s (88.6 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'rasmol' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/rasmol.git Please use: git clone https://salsa.debian.org/science-team/rasmol.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 9893 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (dsc) [2163 B] Get:2 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (tar) [9815 kB] Get:3 http://deb.debian.org/debian unstable/main rasmol 2.7.6.0-3 (diff) [75.3 kB] Fetched 9893 kB in 0s (88.6 MB/s) Download complete and in download only mode ============================================================================= Re-Building rasmol in unstable on arm64 on codethink02-arm64 now. Date: Fri Nov 22 14:34:11 GMT 2024 Date UTC: Fri Nov 22 14:34:11 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_tM0h + case ${ARCH} in + case $ARCH in + locale=nl_BE + language=nl + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' rasmol = debian-installer -o rasmol = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' rasmol = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_tM0h --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2 --logfile b2/build.log rasmol_2.7.6.0-3.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 04:34:12 +14 2024 I: pbuilder-time-stamp: 1732286052 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [rasmol_2.7.6.0-3.dsc] I: copying [./rasmol_2.7.6.0.orig.tar.gz] I: copying [./rasmol_2.7.6.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Jul 29 08:46:21 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./rasmol_2.7.6.0-3.dsc: no acceptable signature found dpkg-source: info: extracting rasmol in rasmol-2.7.6.0 dpkg-source: info: unpacking rasmol_2.7.6.0.orig.tar.gz dpkg-source: info: unpacking rasmol_2.7.6.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_imakefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D01_modify_environment starting debug: Running on codethink02-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 22 14:34 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=8c153871266349018f2c2804a862794d LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=3307875 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_tM0h --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2 --logfile b2/build.log rasmol_2.7.6.0-3.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), bash-completion, xutils-dev, libx11-dev, libxext-dev, libxi-dev, x11proto-core-dev, libvte-2.91-dev, libgtk-3-dev, libcbf-dev, libcvector-dev, libcqrlib-dev, libcneartree-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on xutils-dev; however: Package xutils-dev is not installed. pbuilder-satisfydepends-dummy depends on libx11-dev; however: Package libx11-dev is not installed. pbuilder-satisfydepends-dummy depends on libxext-dev; however: Package libxext-dev is not installed. pbuilder-satisfydepends-dummy depends on libxi-dev; however: Package libxi-dev is not installed. pbuilder-satisfydepends-dummy depends on x11proto-core-dev; however: Package x11proto-core-dev is not installed. pbuilder-satisfydepends-dummy depends on libvte-2.91-dev; however: Package libvte-2.91-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtk-3-dev; however: Package libgtk-3-dev is not installed. pbuilder-satisfydepends-dummy depends on libcbf-dev; however: Package libcbf-dev is not installed. pbuilder-satisfydepends-dummy depends on libcvector-dev; however: Package libcvector-dev is not installed. pbuilder-satisfydepends-dummy depends on libcqrlib-dev; however: Package libcqrlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libcneartree-dev; however: Package libcneartree-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdextrautils{a} comerr-dev{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gir1.2-atk-1.0{a} gir1.2-atspi-2.0{a} gir1.2-cloudproviders-0.3.0{a} gir1.2-freedesktop{a} gir1.2-freedesktop-dev{a} gir1.2-gdkpixbuf-2.0{a} gir1.2-glib-2.0{a} gir1.2-glib-2.0-dev{a} gir1.2-gtk-3.0{a} gir1.2-harfbuzz-0.0{a} gir1.2-pango-1.0{a} gir1.2-vte-2.91{a} girepository-tools{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libapparmor1{a} libarchive-zip-perl{a} libatk-bridge2.0-0t64{a} libatk-bridge2.0-dev{a} libatk1.0-0t64{a} libatk1.0-dev{a} libatspi2.0-0t64{a} libatspi2.0-dev{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblkid-dev{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libcbf-dev{a} libcbf1t64{a} libcloudproviders-dev{a} libcloudproviders0{a} libcneartree-dev{a} libcneartree7t64{a} libcolord2{a} libcom-err2{a} libcqrlib-dev{a} libcqrlib2{a} libcups2t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcvector-dev{a} libcvector2{a} libdatrie-dev{a} libdatrie1{a} libdbus-1-3{a} libdbus-1-dev{a} libdconf1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libegl1-mesa-dev{a} libelf1t64{a} libepoxy-dev{a} libepoxy0{a} libevent-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfreetype-dev{a} libfreetype6{a} libfribidi-dev{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf-2.0-dev{a} libgdk-pixbuf2.0-bin{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgio-2.0-dev{a} libgio-2.0-dev-bin{a} libgirepository-2.0-0{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgraphite2-dev{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgtk-3-0t64{a} libgtk-3-common{a} libgtk-3-dev{a} libharfbuzz-cairo0{a} libharfbuzz-dev{a} libharfbuzz-gobject0{a} libharfbuzz-icu0{a} libharfbuzz-subset0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libice-dev{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} liblerc-dev{a} liblerc4{a} libllvm19{a} liblzma-dev{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libmount-dev{a} libnghttp2-14{a} libnghttp2-dev{a} libnsl2{a} libopengl-dev{a} libopengl0{a} libp11-kit-dev{a} libpam-systemd{a} libpango-1.0-0{a} libpango1.0-dev{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpangoxft-1.0-0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm-dev{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsysprof-capture-4-dev{a} libsystemd-shared{a} libsz2{a} libtasn1-6-dev{a} libthai-data{a} libthai-dev{a} libthai0{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libunbound8{a} libvte-2.91-0{a} libvte-2.91-common{a} libvte-2.91-dev{a} libvulkan1{a} libwayland-bin{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-dev{a} libwayland-egl1{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxcomposite-dev{a} libxcomposite1{a} libxcursor-dev{a} libxcursor1{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi-dev{a} libxi6{a} libxinerama-dev{a} libxinerama1{a} libxkbcommon-dev{a} libxkbcommon0{a} libxml2{a} libxrandr-dev{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence1{a} libxtst-dev{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} native-architecture{a} netbase{a} nettle-dev{a} pango1.0-tools{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3-packaging{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} systemd{a} systemd-sysv{a} tzdata{a} uuid-dev{a} wayland-protocols{a} x11-common{a} x11proto-dev{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} xutils-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core bzip2-doc ca-certificates chrony curl krb5-locales libarchive-cpio-perl libgtk-3-bin libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libpng-tools librsvg2-common libsasl2-modules libtasn1-doc libvte-2.91-doc linux-sysctl-defaults lynx mesa-vulkan-drivers ntpsec openntpd psmisc publicsuffix systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 354 newly installed, 0 to remove and 0 not upgraded. Need to get 146 MB of archives. After unpacking 672 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libapparmor1 arm64 3.1.7-1+b3 [41.8 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libsystemd-shared arm64 257~rc2-3 [1902 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 systemd arm64 257~rc2-3 [3360 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 systemd-sysv arm64 257~rc2-3 [59.3 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.14.10-6 [196 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 dbus-bin arm64 1.14.10-6 [105 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 dbus-daemon arm64 1.14.10-6 [178 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 dbus arm64 1.14.10-6 [97.4 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-3 [255 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.7-3 [671 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B] Get: 32 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 sgml-base all 1.31 [15.4 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 bash-completion all 1:2.14.0-2 [310 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libpam-systemd arm64 257~rc2-3 [270 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.82.2-3 [1411 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b1 [755 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.44-2 [273 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.22-1 [42.2 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.4.0-0.1+b1 [112 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.4.0-0.1+b1 [268 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-5 [309 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-1+b1 [131 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 gtk-update-icon-cache arm64 4.16.5+ds-2 [49.9 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 at-spi2-common all 2.54.0-1 [170 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.1-1+b1 [55.1 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 dbus-user-session arm64 1.14.10-6 [79.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libdconf1 arm64 0.40.0-4+b3 [40.4 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 dconf-service arm64 0.40.0-4+b3 [31.1 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 dconf-gsettings-backend arm64 0.40.0-4+b3 [27.4 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 82 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-1.1+b1 [318 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-1.1+b1 [387 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-1.1+b1 [463 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 gir1.2-glib-2.0 arm64 2.82.2-3 [193 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 libatk1.0-0t64 arm64 2.54.0-1 [49.7 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 gir1.2-atk-1.0 arm64 2.54.0-1 [25.5 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.10-2 [337 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.10-2 [789 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b2 [49.3 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b2 [27.2 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.2-2 [483 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libcairo-gobject2 arm64 1.18.2-2 [130 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 gir1.2-freedesktop arm64 1.82.0-2 [59.7 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-0t64 arm64 2.54.0-1 [72.9 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 gir1.2-atspi-2.0 arm64 2.54.0-1 [22.9 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libcloudproviders0 arm64 0.3.6-1+b1 [27.7 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 gir1.2-cloudproviders-0.3.0 arm64 0.3.6-1+b1 [7340 B] Get: 116 http://deb.debian.org/debian unstable/main arm64 gir1.2-glib-2.0-dev arm64 2.82.2-3 [903 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 gir1.2-freedesktop-dev arm64 1.82.0-2 [50.8 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 gir1.2-gdkpixbuf-2.0 arm64 2.42.12+dfsg-1+b1 [14.3 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 10.0.1-1 [441 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-gobject0 arm64 10.0.1-1 [32.0 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 gir1.2-harfbuzz-0.0 arm64 10.0.1-1 [41.8 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.15-1 [71.8 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.54.0+ds-3 [210 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.54.0+ds-3 [51.8 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.54.0+ds-3 [33.5 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 libxft2 arm64 2.3.6-1+b2 [51.6 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 libpangoxft-1.0-0 arm64 1.54.0+ds-3 [26.8 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 gir1.2-pango-1.0 arm64 1.54.0+ds-3 [38.6 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-0t64 arm64 2.54.0-1 [64.4 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 libcolord2 arm64 1.4.7-1+b2 [130 kB] Get: 136 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-13+b3 [112 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-13+b3 [42.3 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-13+b3 [46.0 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.10-2 [235 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.23.0-1+b1 [26.0 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.23.0-1+b1 [11.5 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.23.0-1+b1 [5768 B] Get: 144 http://deb.debian.org/debian unstable/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b2 [20.5 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.2-1+b1 [37.1 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b2 [16.1 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.7.0-1 [106 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b1 [36.0 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 libgtk-3-0t64 arm64 3.24.43-4 [2546 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 gir1.2-gtk-3.0 arm64 3.24.43-4 [223 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-common arm64 0.78.1-1 [689 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-0 arm64 0.78.1-1 [883 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 gir1.2-vte-2.91 arm64 0.78.1-1 [652 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 native-architecture all 0.2.3 [2108 B] Get: 159 http://deb.debian.org/debian unstable/main arm64 libgirepository-2.0-0 arm64 2.82.2-3 [130 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 girepository-tools arm64 2.82.2-3 [134 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.10.10+repack-4 [23.5 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 icu-devtools arm64 72.1-5+b1 [195 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.21.3-3 [56.7 kB] Get: 164 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.21.3-3 [40.3 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.21.3-3 [40.8 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.21.3-3 [52.2 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.21.3-3 [126 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 170 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.3-1+b1 [20.2 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 libffi-dev arm64 3.4.6-1 [57.0 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 uuid-dev arm64 2.40.2-11 [47.8 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 libblkid-dev arm64 2.40.2-11 [208 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 libsepol-dev arm64 3.7-1 [354 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.44-4 [230 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.44-4 [220 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 libpcre2-posix3 arm64 10.44-4 [60.4 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 libpcre2-dev arm64 10.44-4 [704 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 libselinux1-dev arm64 3.7-3+b1 [164 kB] Get: 183 http://deb.debian.org/debian unstable/main arm64 libmount-dev arm64 2.40.2-11 [28.9 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 libsysprof-capture-4-dev arm64 47.1-1 [49.1 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 libgio-2.0-dev arm64 2.82.2-3 [1691 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 libglib2.0-data all 2.82.2-3 [1275 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 libglib2.0-bin arm64 2.82.2-3 [123 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.2-1 [55.3 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 libgio-2.0-dev-bin arm64 2.82.2-3 [162 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev-bin arm64 2.82.2-3 [51.5 kB] Get: 192 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev arm64 2.82.2-3 [52.3 kB] Get: 193 http://deb.debian.org/debian unstable/main arm64 libatk1.0-dev arm64 2.54.0-1 [106 kB] Get: 194 http://deb.debian.org/debian unstable/main arm64 xml-core all 0.19 [20.1 kB] Get: 195 http://deb.debian.org/debian unstable/main arm64 libdbus-1-dev arm64 1.14.10-6 [244 kB] Get: 196 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+23.1 [216 kB] Get: 197 http://deb.debian.org/debian unstable/main arm64 libxtst6 arm64 2:1.2.3-1.1+b2 [26.0 kB] Get: 198 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 199 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2024.1-1 [603 kB] Get: 200 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB] Get: 201 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-1 [44.2 kB] Get: 202 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 203 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB] Get: 204 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.10-2 [877 kB] Get: 205 http://deb.debian.org/debian unstable/main arm64 libxext-dev arm64 2:1.3.4-1+b2 [105 kB] Get: 206 http://deb.debian.org/debian unstable/main arm64 libxfixes-dev arm64 1:6.0.0-2+b2 [22.8 kB] Get: 207 http://deb.debian.org/debian unstable/main arm64 libxi-dev arm64 2:1.8.2-1 [240 kB] Get: 208 http://deb.debian.org/debian unstable/main arm64 libxtst-dev arm64 2:1.2.3-1.1+b2 [30.4 kB] Get: 209 http://deb.debian.org/debian unstable/main arm64 libatspi2.0-dev arm64 2.54.0-1 [81.8 kB] Get: 210 http://deb.debian.org/debian unstable/main arm64 libatk-bridge2.0-dev arm64 2.54.0-1 [9740 B] Get: 211 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b6 [308 kB] Get: 212 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB] Get: 213 http://deb.debian.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b1 [49.6 kB] Get: 214 http://deb.debian.org/debian unstable/main arm64 libcairo-script-interpreter2 arm64 1.18.2-2 [57.4 kB] Get: 215 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.6.4-1 [143 kB] Get: 216 http://deb.debian.org/debian unstable/main arm64 libpng-dev arm64 1.6.44-2 [360 kB] Get: 217 http://deb.debian.org/debian unstable/main arm64 libfreetype-dev arm64 2.13.3+dfsg-1 [600 kB] Get: 218 http://deb.debian.org/debian unstable/main arm64 libfontconfig-dev arm64 2.15.0-1.1+b1 [411 kB] Get: 219 http://deb.debian.org/debian unstable/main arm64 libpixman-1-dev arm64 0.44.0-3 [11.4 kB] Get: 220 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Get: 221 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.4-1 [34.2 kB] Get: 222 http://deb.debian.org/debian unstable/main arm64 libice-dev arm64 2:1.1.1-1 [73.0 kB] Get: 223 http://deb.debian.org/debian unstable/main arm64 libsm-dev arm64 2:1.2.4-1 [38.0 kB] Get: 224 http://deb.debian.org/debian unstable/main arm64 libxcb-render0-dev arm64 1.17.0-2+b1 [119 kB] Get: 225 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0-dev arm64 1.17.0-2+b1 [108 kB] Get: 226 http://deb.debian.org/debian unstable/main arm64 libxrender-dev arm64 1:0.9.10-1.1+b2 [35.7 kB] Get: 227 http://deb.debian.org/debian unstable/main arm64 libcairo2-dev arm64 1.18.2-2 [43.0 kB] Get: 228 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 229 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 230 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 231 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 232 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 233 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 234 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 235 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 236 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB] Get: 237 http://deb.debian.org/debian unstable/main arm64 libcbf1t64 arm64 0.9.7+dfsg1-4+b1 [332 kB] Get: 238 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB] Get: 239 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-102t64 arm64 1.10.10+repack-4 [88.1 kB] Get: 240 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB] Get: 241 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-100t64 arm64 1.10.10+repack-4 [39.0 kB] Get: 242 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-103-1t64 arm64 1.10.10+repack-4 [118 kB] Get: 243 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-100t64 arm64 1.10.10+repack-4 [21.4 kB] Get: 244 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3+b1 [293 kB] Get: 245 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-3+b1 [72.2 kB] Get: 246 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.7-2+b1 [122 kB] Get: 247 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.21.3-3 [15.8 kB] Get: 248 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.5.18+dfsg-3+b1 [300 kB] Get: 249 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1 [112 kB] Get: 250 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Get: 251 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 252 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-2+b2 [621 kB] Get: 253 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Get: 254 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.22.0-1 [553 kB] Get: 255 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.8-2 [446 kB] Get: 256 http://deb.debian.org/debian unstable/main arm64 libgnutls-openssl27t64 arm64 3.8.8-2 [446 kB] Get: 257 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.25.5-2+b1 [208 kB] Get: 258 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.19.0-3+b3 [96.5 kB] Get: 259 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10-1+b1 [1324 kB] Get: 260 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.8-2 [1404 kB] Get: 261 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB] Get: 262 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.3.2-2 [3185 kB] Get: 263 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Get: 264 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.6+dfsg-1+b1 [329 kB] Get: 265 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.11.0-1 [447 kB] Get: 266 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.10.10+repack-4 [2697 kB] Get: 267 http://deb.debian.org/debian unstable/main arm64 libcbf-dev arm64 0.9.7+dfsg1-4+b1 [438 kB] Get: 268 http://deb.debian.org/debian unstable/main arm64 libcloudproviders-dev arm64 0.3.6-1+b1 [17.5 kB] Get: 269 http://deb.debian.org/debian unstable/main arm64 libcvector2 arm64 1.0.4.1-2+b2 [6148 B] Get: 270 http://deb.debian.org/debian unstable/main arm64 libcneartree7t64 arm64 5.1.1+dfsg1-2.1+b1 [25.9 kB] Get: 271 http://deb.debian.org/debian unstable/main arm64 libcneartree-dev arm64 5.1.1+dfsg1-2.1+b1 [78.2 kB] Get: 272 http://deb.debian.org/debian unstable/main arm64 libcqrlib2 arm64 1.1.4-3+b2 [12.1 kB] Get: 273 http://deb.debian.org/debian unstable/main arm64 libcqrlib-dev arm64 1.1.4-3+b2 [25.0 kB] Get: 274 http://deb.debian.org/debian unstable/main arm64 libcvector-dev arm64 1.0.4.1-2+b2 [9920 B] Get: 275 http://deb.debian.org/debian unstable/main arm64 libdatrie-dev arm64 0.2.13-3+b1 [18.5 kB] Get: 276 http://deb.debian.org/debian unstable/main arm64 libdeflate-dev arm64 1.22-1 [51.2 kB] Get: 277 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.123-1 [8084 B] Get: 278 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.123-1 [38.0 kB] Get: 279 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.123-1 [21.6 kB] Get: 280 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.123-1 [21.3 kB] Get: 281 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB] Get: 282 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB] Get: 283 http://deb.debian.org/debian unstable/main arm64 libwayland-server0 arm64 1.23.0-1+b1 [33.4 kB] Get: 284 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB] Get: 285 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.2.7-1 [48.0 kB] Get: 286 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Get: 287 http://deb.debian.org/debian unstable/main arm64 libllvm19 arm64 1:19.1.3-2 [23.3 MB] Get: 288 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 289 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-10+b1 [34.3 kB] Get: 290 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.10-2 [241 kB] Get: 291 http://deb.debian.org/debian unstable/main arm64 libxcb-dri2-0 arm64 1.17.0-2+b1 [107 kB] Get: 292 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB] Get: 293 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB] Get: 294 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB] Get: 295 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB] Get: 296 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b2 [9076 B] Get: 297 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 24.2.7-1 [7687 kB] Get: 298 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 24.2.7-1 [42.0 kB] Get: 299 http://deb.debian.org/debian unstable/main arm64 libegl-mesa0 arm64 24.2.7-1 [124 kB] Get: 300 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-1+b2 [34.0 kB] Get: 301 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB] Get: 302 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b3 [19.2 kB] Get: 303 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.296.0-1 [123 kB] Get: 304 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.2.7-1 [43.6 kB] Get: 305 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.2.7-1 [153 kB] Get: 306 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB] Get: 307 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB] Get: 308 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-1+b2 [15.8 kB] Get: 309 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-1+b2 [101 kB] Get: 310 http://deb.debian.org/debian unstable/main arm64 libegl-dev arm64 1.7.0-1+b2 [19.5 kB] Get: 311 http://deb.debian.org/debian unstable/main arm64 libglvnd-core-dev arm64 1.7.0-1+b2 [13.4 kB] Get: 312 http://deb.debian.org/debian unstable/main arm64 libgles1 arm64 1.7.0-1+b2 [12.6 kB] Get: 313 http://deb.debian.org/debian unstable/main arm64 libgles2 arm64 1.7.0-1+b2 [18.0 kB] Get: 314 http://deb.debian.org/debian unstable/main arm64 libgles-dev arm64 1.7.0-1+b2 [50.8 kB] Get: 315 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-1+b2 [32.1 kB] Get: 316 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-1+b2 [5376 B] Get: 317 http://deb.debian.org/debian unstable/main arm64 libglvnd-dev arm64 1.7.0-1+b2 [5144 B] Get: 318 http://deb.debian.org/debian unstable/main arm64 libegl1-mesa-dev arm64 24.2.7-1 [22.7 kB] Get: 319 http://deb.debian.org/debian unstable/main arm64 libepoxy-dev arm64 1.5.10-2 [127 kB] Get: 320 http://deb.debian.org/debian unstable/main arm64 libfribidi-dev arm64 1.0.15-1 [111 kB] Get: 321 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-bin arm64 2.42.12+dfsg-1+b1 [19.0 kB] Get: 322 http://deb.debian.org/debian unstable/main arm64 libjbig-dev arm64 2.1-6.1+b2 [30.5 kB] Get: 323 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.6.3-1+b1 [312 kB] Get: 324 http://deb.debian.org/debian unstable/main arm64 libwebpdemux2 arm64 1.4.0-0.1+b1 [110 kB] Get: 325 http://deb.debian.org/debian unstable/main arm64 libwebpmux3 arm64 1.4.0-0.1+b1 [122 kB] Get: 326 http://deb.debian.org/debian unstable/main arm64 libwebpdecoder3 arm64 1.4.0-0.1+b1 [179 kB] Get: 327 http://deb.debian.org/debian unstable/main arm64 libsharpyuv-dev arm64 1.4.0-0.1+b1 [115 kB] Get: 328 http://deb.debian.org/debian unstable/main arm64 libwebp-dev arm64 1.4.0-0.1+b1 [400 kB] Get: 329 http://deb.debian.org/debian unstable/main arm64 libtiffxx6 arm64 4.5.1+git230720-5 [149 kB] Get: 330 http://deb.debian.org/debian unstable/main arm64 liblerc-dev arm64 4.0.0+ds-5 [164 kB] Get: 331 http://deb.debian.org/debian unstable/main arm64 libtiff-dev arm64 4.5.1+git230720-5 [451 kB] Get: 332 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-dev arm64 2.42.12+dfsg-1+b1 [52.7 kB] Get: 333 http://deb.debian.org/debian unstable/main arm64 libgraphite2-dev arm64 1.3.14-2+b1 [20.3 kB] Get: 334 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-icu0 arm64 10.0.1-1 [15.3 kB] Get: 335 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-subset0 arm64 10.0.1-1 [507 kB] Get: 336 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-cairo0 arm64 10.0.1-1 [41.9 kB] Get: 337 http://deb.debian.org/debian unstable/main arm64 libicu-dev arm64 72.1-5+b1 [10.3 MB] Get: 338 http://deb.debian.org/debian unstable/main arm64 libharfbuzz-dev arm64 10.0.1-1 [145 kB] Get: 339 http://deb.debian.org/debian unstable/main arm64 libthai-dev arm64 0.1.29-2+b1 [24.0 kB] Get: 340 http://deb.debian.org/debian unstable/main arm64 libxft-dev arm64 2.3.6-1+b2 [72.0 kB] Get: 341 http://deb.debian.org/debian unstable/main arm64 pango1.0-tools arm64 1.54.0+ds-3 [41.1 kB] Get: 342 http://deb.debian.org/debian unstable/main arm64 libpango1.0-dev arm64 1.54.0+ds-3 [154 kB] Get: 343 http://deb.debian.org/debian unstable/main arm64 libwayland-bin arm64 1.23.0-1+b1 [20.5 kB] Get: 344 http://deb.debian.org/debian unstable/main arm64 libwayland-dev arm64 1.23.0-1+b1 [73.6 kB] Get: 345 http://deb.debian.org/debian unstable/main arm64 libxcomposite-dev arm64 1:0.4.6-1 [20.2 kB] Get: 346 http://deb.debian.org/debian unstable/main arm64 libxcursor-dev arm64 1:1.2.2-1+b1 [49.3 kB] Get: 347 http://deb.debian.org/debian unstable/main arm64 libxdamage-dev arm64 1:1.1.6-1+b2 [15.5 kB] Get: 348 http://deb.debian.org/debian unstable/main arm64 libxinerama-dev arm64 2:1.1.4-3+b2 [18.4 kB] Get: 349 http://deb.debian.org/debian unstable/main arm64 libxkbcommon-dev arm64 1.7.0-1 [53.6 kB] Get: 350 http://deb.debian.org/debian unstable/main arm64 libxrandr-dev arm64 2:1.5.4-1+b1 [44.5 kB] Get: 351 http://deb.debian.org/debian unstable/main arm64 wayland-protocols all 1.38-1 [102 kB] Get: 352 http://deb.debian.org/debian unstable/main arm64 libgtk-3-dev arm64 3.24.43-4 [1128 kB] Get: 353 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-dev arm64 0.78.1-1 [691 kB] Get: 354 http://deb.debian.org/debian unstable/main arm64 xutils-dev arm64 1:7.7+7 [239 kB] Fetched 146 MB in 3s (56.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b3_arm64.deb ... Unpacking libapparmor1:arm64 (3.1.7-1+b3) ... Selecting previously unselected package libsystemd-shared:arm64. Preparing to unpack .../libsystemd-shared_257~rc2-3_arm64.deb ... Unpacking libsystemd-shared:arm64 (257~rc2-3) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_257~rc2-3_arm64.deb ... Unpacking systemd (257~rc2-3) ... Setting up libapparmor1:arm64 (3.1.7-1+b3) ... Setting up libsystemd-shared:arm64 (257~rc2-3) ... Setting up systemd (257~rc2-3) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21040 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_257~rc2-3_arm64.deb ... Unpacking systemd-sysv (257~rc2-3) ... Selecting previously unselected package libdbus-1-3:arm64. Preparing to unpack .../1-libdbus-1-3_1.14.10-6_arm64.deb ... Unpacking libdbus-1-3:arm64 (1.14.10-6) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../2-dbus-bin_1.14.10-6_arm64.deb ... 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Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libcneartree7t64:arm64 (5.1.1+dfsg1-2.1+b1) ... Setting up libwayland-egl1:arm64 (1.23.0-1+b1) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libopengl-dev:arm64 (1.7.0-1+b2) ... Setting up dbus-system-bus-common (1.14.10-6) ... useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Setting up libsharpyuv-dev:arm64 (1.4.0-0.1+b1) ... Setting up libtasn1-6-dev:arm64 (4.19.0-3+b3) ... Setting up libwebpmux3:arm64 (1.4.0-0.1+b1) ... Setting up libtiffxx6:arm64 (4.5.1+git230720-5) ... Setting up libdeflate-dev:arm64 (1.22-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxcomposite1:arm64 (1:0.4.6-1) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:arm64 (72.1-5+b1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up dbus-bin (1.14.10-6) ... Setting up libbrotli-dev:arm64 (1.1.0-2+b6) ... 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Setting up libgnutls28-dev:arm64 (3.8.8-2) ... Setting up gtk-update-icon-cache (4.16.5+ds-2) ... Setting up libnghttp2-dev:arm64 (1.64.0-1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:arm64 (2.3.6-1+b2) ... Setting up libgio-2.0-dev:arm64 (2.82.2-3) ... Setting up libharfbuzz-icu0:arm64 (10.0.1-1) ... Setting up girepository-tools:arm64 (2.82.2-3) ... Setting up libxcb1-dev:arm64 (1.17.0-2+b1) ... Setting up libxi6:arm64 (2:1.8.2-1) ... Setting up gir1.2-gdkpixbuf-2.0:arm64 (2.42.12+dfsg-1+b1) ... Setting up libcurl4t64:arm64 (8.11.0-1) ... Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Setting up libsm-dev:arm64 (2:1.2.4-1) ... Setting up libdrm-radeon1:arm64 (2.4.123-1) ... Setting up libxtst6:arm64 (2:1.2.3-1.1+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxcursor1:arm64 (1:1.2.2-1+b1) ... Setting up libpango-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libx11-dev:arm64 (2:1.8.10-2) ... Setting up libharfbuzz-gobject0:arm64 (10.0.1-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libwayland-dev:arm64 (1.23.0-1+b1) ... Setting up libcairo2:arm64 (1.18.2-2) ... Setting up libfreetype-dev:arm64 (2.13.3+dfsg-1) ... Setting up libxfixes-dev:arm64 (1:6.0.0-2+b2) ... Setting up libxcb-shm0-dev:arm64 (1.17.0-2+b1) ... Setting up dbus-user-session (1.14.10-6) ... Setting up libharfbuzz-cairo0:arm64 (10.0.1-1) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libgssrpc4t64:arm64 (1.21.3-3) ... Setting up libatspi2.0-0t64:arm64 (2.54.0-1) ... Setting up librtmp-dev:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxcb-render0-dev:arm64 (1.17.0-2+b1) ... 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Setting up gir1.2-freedesktop:arm64 (1.82.0-2) ... Setting up libcbf1t64:arm64 (0.9.7+dfsg1-4+b1) ... Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ... Setting up libpangoxft-1.0-0:arm64 (1.54.0+ds-3) ... Setting up libkdb5-10t64:arm64 (1.21.3-3) ... Setting up libgbm1:arm64 (24.2.7-1) ... Setting up libfontconfig-dev:arm64 (2.15.0-1.1+b1) ... Setting up libxcomposite-dev:arm64 (1:0.4.6-1) ... Setting up libxcursor-dev:arm64 (1:1.2.2-1+b1) ... Setting up python3.12 (3.12.7-3) ... Setting up libhdf5-cpp-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libgl1-mesa-dri:arm64 (24.2.7-1) ... Setting up pango1.0-tools (1.54.0+ds-3) ... Setting up libhdf5-fortran-102t64:arm64 (1.10.10+repack-4) ... Setting up debhelper (13.20) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up gir1.2-atspi-2.0:arm64 (2.54.0-1) ... Setting up gir1.2-harfbuzz-0.0:arm64 (10.0.1-1) ... Setting up gir1.2-pango-1.0:arm64 (1.54.0+ds-3) ... Setting up libxrandr-dev:arm64 (2:1.5.4-1+b1) ... 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Setting up libhdf5-dev (1.10.10+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglx-dev:arm64 (1.7.0-1+b2) ... Setting up libgl-dev:arm64 (1.7.0-1+b2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libgio-2.0-dev-bin (2.82.2-3) ... Setting up libegl-dev:arm64 (1.7.0-1+b2) ... Setting up libepoxy-dev:arm64 (1.5.10-2) ... Setting up libcbf-dev:arm64 (0.9.7+dfsg1-4+b1) ... Setting up libgtk-3-0t64:arm64 (3.24.43-4) ... Setting up libgles-dev:arm64 (1.7.0-1+b2) ... Setting up libglib2.0-dev-bin (2.82.2-3) ... Setting up gir1.2-gtk-3.0:arm64 (3.24.43-4) ... Setting up libglvnd-dev:arm64 (1.7.0-1+b2) ... Setting up libvte-2.91-0:arm64 (0.78.1-1) ... Setting up libglib2.0-dev:arm64 (2.82.2-3) ... Setting up libcairo2-dev:arm64 (1.18.2-2) ... Setting up gir1.2-vte-2.91:arm64 (0.78.1-1) ... Setting up libatk1.0-dev:arm64 (2.54.0-1) ... Setting up libegl1-mesa-dev:arm64 (24.2.7-1) ... Setting up libgdk-pixbuf-2.0-dev:arm64 (2.42.12+dfsg-1+b1) ... Setting up libharfbuzz-dev:arm64 (10.0.1-1) ... Setting up libcloudproviders-dev:arm64 (0.3.6-1+b1) ... Setting up libpango1.0-dev:arm64 (1.54.0+ds-3) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (257~rc2-3) ... Processing triggers for sgml-base (1.31) ... Setting up libdbus-1-dev:arm64 (1.14.10-6) ... Setting up libatspi2.0-dev:arm64 (2.54.0-1) ... Setting up libatk-bridge2.0-dev:arm64 (2.54.0-1) ... Setting up libgtk-3-dev:arm64 (3.24.43-4) ... Setting up libvte-2.91-dev:arm64 (0.78.1-1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/rasmol-2.7.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../rasmol_2.7.6.0-3_source.changes dpkg-buildpackage: info: source package rasmol dpkg-buildpackage: info: source version 2.7.6.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh_testdir dh_testroot if [ -f src/Makefile ] ; then /usr/bin/make -C src distclean ; fi rm -f src/rasmol-gtk src/rasmol.32 src/rasmol.16 src/rasmol.8 rm -f src/gtkui.h rm -f manualA4.pdf refcardA4.pdf rm -f x11-stamp dh clean dh_clean debian/rules binary dh_testdir rm -f x11-stamp cd /build/reproducible-path/rasmol-2.7.6.0/src ; xmkmf '-DGTKWIN -DGTK3 -Uvector' ; cd /build/reproducible-path/rasmol-2.7.6.0 imake -DGTKWIN -DGTK3 -Uvector -DUseInstalled -I/usr/lib/X11/config /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' mkdir -p -v ../external_packages mkdir: created directory '../external_packages' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ echo "/* Automatically generated GTK ui definitions, do not edit! */" > gtkui.h echo >> gtkui.h echo "const gchar *actionmenu_str = \"\\" >> gtkui.h cat actionmenu.gtk | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *sizechooser_str = \"\\" >> gtkui.h gtk-builder-convert -w sizechooser.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: line 1: gtk-builder-convert: command not found echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *print_resolution_str = \"\\" >> gtkui.h gtk-builder-convert -w printing-resolution.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h /bin/sh: line 1: gtk-builder-convert: command not found echo "\";" >> gtkui.h echo >> gtkui.h gdk-pixbuf-csource --name=rasmol_icon --struct rasmol_48x48.xpm >> gtkui.h gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gtkwin.o gtkwin.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from gtkwin.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/include/glib-2.0/glib.h:64, from /usr/include/vte-2.91/vte/vte.h:20, from gtkwin.c:87: gtkwin.c: In function 'build_exportdialog': gtkwin.c:555:19: warning: too many arguments for format [-Wformat-extra-args] 555 | g_message("building size chooser failed: s", err->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:358:32: note: in definition of macro 'g_message' 358 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'build_gtkmenu': gtkwin.c:1297:19: warning: too many arguments for format [-Wformat-extra-args] 1297 | g_message("building menus failed: s", error->message); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/glib-2.0/glib/gmessages.h:358:32: note: in definition of macro 'g_message' 358 | __VA_ARGS__) | ^~~~~~~~~~~ gtkwin.c: In function 'UpdateGtkMoleculeList': gtkwin.c:1233:32: warning: '%d' directive output may be truncated writing between 1 and 10 bytes into a region of size 3 [-Wformat-truncation=] 1233 | snprintf(itemname, 3, "%d", i); | ^~ gtkwin.c:1233:31: note: directive argument in the range [0, 2147483646] 1233 | snprintf(itemname, 3, "%d", i); | ^~~~ In file included from /usr/include/stdio.h:970, from gtkwin.c:82: In function 'snprintf', inlined from 'UpdateGtkMoleculeList' at gtkwin.c:1233:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output between 2 and 11 bytes into a destination of size 3 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -I/usr/include/vte-2.91 -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/fribidi -I/usr/include/gtk-3.0 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I/usr/include/gio-unix-2.0 -I/usr/include/cloudproviders -I/usr/include/atk-1.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/aarch64-linux-gnu/dbus-1.0/include -pthread -Wno-deprecated-declarations -DGTKWIN -DGTK3 -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o eggfileformatchooser.o eggfileformatchooser.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/limits.h:210, from /usr/lib/gcc/aarch64-linux-gnu/14/include/syslimits.h:7, from /usr/lib/gcc/aarch64-linux-gnu/14/include/limits.h:34, from /usr/lib/aarch64-linux-gnu/glib-2.0/include/glibconfig.h:11, from /usr/include/glib-2.0/glib/gtypes.h:34, from /usr/include/glib-2.0/glib/galloca.h:34, from /usr/include/glib-2.0/glib.h:32, from /usr/include/gtk-3.0/gdk/gdkconfig.h:8, from /usr/include/gtk-3.0/gdk/gdk.h:30, from /usr/include/gtk-3.0/gtk/gtk.h:30, from eggfileformatchooser.h:22, from eggfileformatchooser.c:19: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ eggfileformatchooser.c: In function 'egg_file_format_chooser_init': eggfileformatchooser.c:344:13: warning: Deprecated pre-processor symbol: replace with "G_ADD_PRIVATE" 344 | EggFileFormatChooserPrivate); | ^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o gtkwin.o eggfileformatchooser.o -lm -lXext -lX11 -lvte-2.91 -lgio-2.0 -lgtk-3 -lpango-1.0 -lcairo -lgdk_pixbuf-2.0 -lgobject-2.0 -lglib-2.0 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree ln -s ../doc/rasmol.1 rasmol.man rm -f rasmol._man if test -z "true" ; then \ cd `dirname rasmol` && \ ln -s `basename rasmol.man` `basename rasmol._man`; \ else \ cpp -undef -traditional -D__apploaddir__=/etc/X11/app-defaults -D__filemansuffix__=5x -D__osfilemansuffix__=5 -D__libmansuffix__=3x -D__oslibmansuffix__=3 -D__mansuffix__=1x -D__osmansuffix__=1 -D__syscallmansuffix__=2x -D__ossysmansuffix__=2 -D__gamemansuffix__=6x -D__osgamemansuffix__=6 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__admmansuffix__=8x -D__osadmmansuffix__=8 -D__miscmansuffix__=7x -D__osmiscmansuffix__=7 -D__drivermansuffix__=4x -D__osdrivermansuffix__=4 -D__adminmansuffix__=8 -D__projectroot__=/usr -D__xconfigfile__=xorg.conf -D__xconfigdir__=/usr/lib/X11 -D__xlogfile__=Xorg -D__xservername__=Xorg -D__appmansuffix__=1x -D__xorgversion__="\"`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'`\" \"X Version 11\"" -D__vendorversion__="`echo 7 7 0 | sed -e 's/ /./g' -e 's/^/Version\\\ /'` X.Org" \ < rasmol.man | sed -e '/^# *[0-9][0-9]* *.*$/d' -e '/^#line *[0-9][0-9]* *.*$/d' -e '/^[ ]*XCOMM$/s/XCOMM/#/' -e '/^[ ]*XCOMM[^a-zA-Z0-9_]/s/XCOMM/#/' -e '/^[ ]*XHASH/s/XHASH/#/' -e '/\@\@$/s/\@\@$/\\/' >rasmol._man; \ fi make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol-gtk cd /build/reproducible-path/rasmol-2.7.6.0/src ; xmkmf '-DX11WIN -Uvector' ; cd /build/reproducible-path/rasmol-2.7.6.0 mv -f Makefile Makefile.bak imake -DX11WIN -Uvector -DUseInstalled -I/usr/lib/X11/config In file included from /usr/lib/X11/config/Imake.tmpl:2293, from Imakefile.c:34: /tmp/IIf.vY1MFo:125: warning: "X11WIN" redefined 125 | #define X11WIN :2: note: this is the location of the previous definition touch x11-stamp dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DEIGHTBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 124 into destination object 'ScaleRef' of size 120 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 126 into destination object 'ScaleRef' of size 120 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DEIGHTBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.8 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DSIXTEENBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DSIXTEENBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.16 dh_testdir /usr/bin/make -C src clean; make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' rm -f rasmol._man rm -f rasmol rm -f gtkui.h rasmol.man rm -f *.CKP *.ln *.BAK *.bak *.o core errs ,* *~ *.a .emacs_* tags TAGS make.log MakeOut "#"* make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' /usr/bin/make -C src DEPTHDEF=-DTHIRTYTWOBIT=1 rasmol make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0/src' gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rasmol.o rasmol.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from rasmol.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o molecule.o molecule.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from molecule.c:220: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o abstree.o abstree.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from abstree.c:81: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cmndline.o cmndline.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cmndline.c:82: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o command.o command.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from command.c:91: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ command.c: In function 'ApplyMapShow': command.c:5545:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5545 | sprintf(buffer," distance to selected van der Waals surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In file included from /usr/include/stdio.h:970, from command.c:118: In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5545:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ApplyMapShow': command.c:5555:123: warning: ' ' directive writing 1 byte into a region of size between 0 and 40 [-Wformat-overflow=] 5555 | sprintf(buffer," distance to selected Lee-Richards surface:\n mean %#g, min %#g, max %#g, esd %#g\n", | ^~ In function 'sprintf', inlined from 'ApplyMapAtomShow' at command.c:5555:9, inlined from 'ApplyMapShow' at command.c:5615:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 95 and 139 bytes into a destination of size 133 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ command.c: In function 'ExecuteCommandOne': command.c:6103:60: warning: '%g' directive writing between 1 and 13 bytes into a region of size between 6 and 18 [-Wformat-overflow=] 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~ command.c:6103:36: note: assuming directive output of 12 bytes 6103 | sprintf(buffer," Time: %g, Delta Time: %g\n", CommandTime, CommandTime-prevtime); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'sprintf', inlined from 'ExecuteCommandOne' at command.c:6103:21: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 25 and 49 bytes into a destination of size 40 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o transfor.o transfor.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from transfor.c:198: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ transfor.c: In function 'ScaleColourMap': transfor.c:2083:23: warning: writing 2 bytes into a region of size 0 [-Wstringop-overflow=] 2083 | { ScaleRef[i].r = 0; | ~~~~~~~~~~~~~~^~~ In file included from transfor.c:229: transfor.h:297:10: note: at offset 252 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ transfor.c:2085:23: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 2085 | ScaleRef[i].b = 255; | ~~~~~~~~~~~~~~^~~~~ transfor.h:297:10: note: at offset 254 into destination object 'ScaleRef' of size 248 297 | ShadeRef ScaleRef[LastShade]; | ^~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o render.o render.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from render.c:189: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o repres.o repres.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from repres.c:234: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pixutils.o pixutils.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from pixutils.c:183: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o outfile.o outfile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from outfile.c:170: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ outfile.c: In function 'WriteR3DFile': outfile.c:3003:47: warning: '%s' directive writing up to 79 bytes into a region of size 22 [-Wformat-overflow=] 3003 | sprintf((char *)name,"%s",buffer); | ^~ ~~~~~~ In file included from /usr/include/stdio.h:970, from outfile.c:191: In function 'sprintf', inlined from 'WriteR3DLabels' at outfile.c:3003:4, inlined from 'WriteR3DFile' at outfile.c:4269:3: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 1 and 80 bytes into a destination of size 22 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o script.o script.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from script.c:164: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o infile.o infile.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from infile.c:196: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tokens.o tokens.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/string.h:26, from tokens.c:194: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_fract.o cif_fract.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_fract.c:197: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif.o cif.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif.c:278: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_ctonum.o cif_ctonum.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from cif_ctonum.c:203: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cif_stx.o cif_stx.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from cif_stx.c:227: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o multiple.o multiple.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from multiple.c:225: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ multiple.c: In function 'DrawMoleculeList': multiple.c:668:45: warning: '%s' directive output may be truncated writing likely 28 or more bytes into a region of size between 25 and 26 [-Wformat-truncation=] 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~ multiple.c:668:40: note: assuming directive output of 28 bytes 668 | snprintf(buf, MAX_MOLNAME-4, "%d. %s", i+1, s); | ^~~~~~~~ In file included from /usr/include/stdio.h:970, from multiple.c:252: In function 'snprintf', inlined from 'DrawMoleculeList' at multiple.c:668:11: /usr/include/aarch64-linux-gnu/bits/stdio2.h:68:10: note: '__builtin___snprintf_chk' output 4 or more bytes (assuming 33) into a destination of size 29 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o vector.o vector.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from vector.c:159: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wbrotate.o wbrotate.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/aarch64-linux-gnu/14/include/stdint.h:9, from rasmol.h:134, from wbrotate.c:201: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o langsel_unix.o langsel_unix.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from langsel_unix.c:114: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o maps.o maps.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from maps.c:83: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o CVector_3D.o CVector_3D.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from CVector_3D.h:55, from CVector_3D.c:48: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o rmsd.o rmsd.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:28, from rmsd.c:38: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ gcc -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Dlinux -D__aarch64__ -D_POSIX_C_SOURCE=199309L -D_POSIX_SOURCE -D_XOPEN_SOURCE -D_BSD_SOURCE -D_SVID_SOURCE -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DFUNCPROTO=15 -DNARROWPROTO -DX11WIN -DRASMOLDIR=\"/usr/share/rasmol/\" -DTHIRTYTWOBIT=1 -D_USE_RASMOL_H_ -I/usr/include/cbflib -I/usr/include/cbf -I/usr/include/hdf5/serial -I/usr/include -I/usr/include -I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o x11win.o x11win.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdlib.h:26, from x11win.c:235: /usr/include/features.h:197:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 197 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1191:24: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1191 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In file included from /usr/include/stdio.h:970, from x11win.c:238: In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1191:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'RegisterInterpName.constprop': x11win.c:1164:28: warning: '%s' directive writing up to 128 bytes into a region of size between 23 and 30 [-Wformat-overflow=] 1164 | sprintf(buffer,"%x %s",(int)MainWin,name); | ^~ In function 'sprintf', inlined from 'RegisterInterpName.constprop' at x11win.c:1164:9: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 138 bytes into a destination of size 32 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ x11win.c: In function 'OpenDisplay': x11win.c:1320:26: warning: '%s' directive writing up to 128 bytes into a region of size 127 [-Wformat-overflow=] 1320 | sprintf(buffer,"{%s}",TkInterp); | ^~ ~~~~~~~~ In function 'sprintf', inlined from 'OpenIPCComms' at x11win.c:1320:9, inlined from 'OpenDisplay' at x11win.c:3013:5: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 131 bytes into a destination of size 128 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ rm -f rasmol gcc -o rasmol -g -O2 -fno-strict-aliasing -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/rasmol-2.7.6.0/src=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro -Wl,-z,now rasmol.o molecule.o abstree.o cmndline.o command.o transfor.o render.o repres.o pixutils.o outfile.o script.o infile.o tokens.o cif_fract.o cif.o cif_ctonum.o cif_stx.o multiple.o vector.o wbrotate.o langsel_unix.o maps.o CVector_3D.o rmsd.o x11win.o -lm -lXext -lX11 -L/usr/lib -lcbf -L/usr/lib -lCQRlib -L/usr/lib -lCVector -L/usr/lib -lCNearTree make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0/src' mv src/rasmol src/rasmol.32 dh binary-arch --with bash-completion debian/rules build-arch make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' make[1]: Nothing to be done for 'build-arch'. make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_prep -a debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installdocs -a debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installman -a dh_bash-completion -a dh_installmime -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'rasmol' in '../rasmol_2.7.6.0-3_arm64.deb'. dpkg-deb: building package 'rasmol-dbgsym' in '../rasmol-dbgsym_2.7.6.0-3_arm64.deb'. dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf dh binary-indep debian/rules build-indep make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_testdir zcat doc/manualA4.pdf.gz > manualA4.pdf zcat doc/refcardA4.pdf.gz > refcardA4.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_prep -i debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_install -Xrasmollogo_22Jun99.jpg make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installdocs -i debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installchangelogs ChangeLog.txt make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_installman -i dh_perl -i dh_link -i dh_strip_nondeterminism -i debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/rasmol-2.7.6.0' dh_compress -X.pdf make[1]: Leaving directory '/build/reproducible-path/rasmol-2.7.6.0' dh_fixperms -i dh_missing -i dh_installdeb -i dh_gencontrol -i dh_md5sums -i dh_builddeb -i dpkg-deb: building package 'rasmol-doc' in '../rasmol-doc_2.7.6.0-3_all.deb'. dpkg-genbuildinfo --build=binary -O../rasmol_2.7.6.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../rasmol_2.7.6.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3307875 and its subdirectories I: Current time: Sat Nov 23 04:47:18 +14 2024 I: pbuilder-time-stamp: 1732286838 + false + set +x Fri Nov 22 14:47:18 UTC 2024 I: Signing ./b2/rasmol_2.7.6.0-3_arm64.buildinfo as rasmol_2.7.6.0-3_arm64.buildinfo.asc Fri Nov 22 14:47:18 UTC 2024 I: Signed ./b2/rasmol_2.7.6.0-3_arm64.buildinfo as ./b2/rasmol_2.7.6.0-3_arm64.buildinfo.asc Fri Nov 22 14:47:18 UTC 2024 - build #2 for rasmol/unstable/arm64 on codethink02-arm64 done. Starting cleanup. All cleanup done. Fri Nov 22 14:47:18 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-zEBVNiZ3, removing. /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m: total 344 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 14:34 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 14:47 b2 -rw-r--r-- 1 jenkins jenkins 2163 Jul 29 2022 rasmol_2.7.6.0-3.dsc -rw------- 1 jenkins jenkins 331997 Nov 22 14:34 rbuildlog.9tSal5l /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1: total 5148 -rw-r--r-- 1 jenkins jenkins 328421 Nov 22 14:34 build.log -rw-r--r-- 1 jenkins jenkins 2845168 Nov 22 14:34 rasmol-dbgsym_2.7.6.0-3_arm64.deb -rw-r--r-- 1 jenkins jenkins 1247244 Nov 22 14:34 rasmol-doc_2.7.6.0-3_all.deb -rw-r--r-- 1 jenkins jenkins 75336 Nov 22 14:34 rasmol_2.7.6.0-3.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2163 Nov 22 14:34 rasmol_2.7.6.0-3.dsc -rw-r--r-- 1 jenkins jenkins 15898 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 16780 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1702 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.changes -rw-r--r-- 1 jenkins jenkins 693952 Nov 22 14:34 rasmol_2.7.6.0-3_arm64.deb -rw-r--r-- 1 jenkins jenkins 1247 Nov 22 14:34 rasmol_2.7.6.0-3_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2: total 5128 -rw-r--r-- 1 jenkins jenkins 330393 Nov 22 14:47 build.log -rw-r--r-- 1 jenkins jenkins 2845168 Nov 22 14:47 rasmol-dbgsym_2.7.6.0-3_arm64.deb -rw-r--r-- 1 jenkins jenkins 1247244 Nov 22 14:47 rasmol-doc_2.7.6.0-3_all.deb -rw-r--r-- 1 jenkins jenkins 75336 Nov 22 14:47 rasmol_2.7.6.0-3.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2163 Nov 22 14:47 rasmol_2.7.6.0-3.dsc -rw-r--r-- 1 jenkins jenkins 15898 Nov 22 14:47 rasmol_2.7.6.0-3_arm64.buildinfo -rw-r--r-- 1 jenkins jenkins 16780 Nov 22 14:47 rasmol_2.7.6.0-3_arm64.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1702 Nov 22 14:47 rasmol_2.7.6.0-3_arm64.changes -rw-r--r-- 1 jenkins jenkins 693952 Nov 22 14:47 rasmol_2.7.6.0-3_arm64.deb -rw-r--r-- 1 jenkins jenkins 1247 Nov 22 14:47 rasmol_2.7.6.0-3_source.changes Fri Nov 22 14:47:21 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. Fri Nov 22 14:47:22 UTC 2024 I: rasmol_2.7.6.0-3_arm64.changes: Format: 1.8 Date: Sat, 29 Jan 2022 19:08:22 +0100 Source: rasmol Binary: rasmol rasmol-dbgsym rasmol-doc Architecture: arm64 all Version: 2.7.6.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andreas Tille Description: rasmol - visualization of biological macromolecules rasmol-doc - documentation for rasmol Changes: rasmol (2.7.6.0-3) unstable; urgency=medium . * Team upload. * Fix watch file * Standards-Version: 4.6.0 (routine-update) Checksums-Sha1: 3c79046bf2defc984293f89eba6aade20ef6497f 2845168 rasmol-dbgsym_2.7.6.0-3_arm64.deb 7d5f5065a02a85a9b9f36b533cd149c17d0fe50b 1247244 rasmol-doc_2.7.6.0-3_all.deb 82eeafdca7f645d7219c13fa1b5e3c9727b79bdb 15898 rasmol_2.7.6.0-3_arm64.buildinfo 08dc9f1b26ddb2028aba2f7fe1bf441a336a1b9e 693952 rasmol_2.7.6.0-3_arm64.deb Checksums-Sha256: 460635b2386f6a4e3f21d15354fcf745d23eb9cb852a852afae6b50fc8d9e521 2845168 rasmol-dbgsym_2.7.6.0-3_arm64.deb b7d6dcb3f3fd4520327a2993cd7946a6b700a9a9e2716c4751c8e21fc566d796 1247244 rasmol-doc_2.7.6.0-3_all.deb f2b59663baa3ee3b9546a26ca550d3c4395042f05531d4ed950a562aa57e09df 15898 rasmol_2.7.6.0-3_arm64.buildinfo 2acedf355162ac942f8ee155deb8e9a9c8a78e998f1795d838d662c03196e19f 693952 rasmol_2.7.6.0-3_arm64.deb Files: 3059c7a2b6c348202d0022c7d673dd8d 2845168 debug optional rasmol-dbgsym_2.7.6.0-3_arm64.deb 41de78378a18190828d24dd870b67157 1247244 doc optional rasmol-doc_2.7.6.0-3_all.deb ee924a1c8fd430b4a144aa25a40d47ea 15898 science optional rasmol_2.7.6.0-3_arm64.buildinfo 1345191dd811a5615436984a3d925ba2 693952 science optional rasmol_2.7.6.0-3_arm64.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/rasmol_2.7.6.0-3.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/rasmol_2.7.6.0-3.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/rasmol_2.7.6.0-3.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/rasmol_2.7.6.0-3.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/arm64/rasmol_2.7.6.0-3_arm64.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/rasmol_2.7.6.0-3.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-22 14:34:07.833693831 +0000 +++ b2/build.log 2024-11-22 14:47:19.649837778 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 25 08:53:01 -12 2025 -I: pbuilder-time-stamp: 1766695981 +I: Current time: Sat Nov 23 04:34:12 +14 2024 +I: pbuilder-time-stamp: 1732286052 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -28,52 +28,84 @@ dpkg-source: info: applying 01_imakefile.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3479771/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 22 14:34 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='1416b92af52f424da970949375479627' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3479771' - PS1='# ' - PS2='> ' + INVOCATION_ID=8c153871266349018f2c2804a862794d + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3307875 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_qnVE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1 --logfile b1/build.log rasmol_2.7.6.0-3.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/pbuilderrc_tM0h --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2 --logfile b2/build.log rasmol_2.7.6.0-3.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3479771/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -487,7 +519,7 @@ Get: 352 http://deb.debian.org/debian unstable/main arm64 libgtk-3-dev arm64 3.24.43-4 [1128 kB] Get: 353 http://deb.debian.org/debian unstable/main arm64 libvte-2.91-dev arm64 0.78.1-1 [691 kB] Get: 354 http://deb.debian.org/debian unstable/main arm64 xutils-dev arm64 1:7.7+7 [239 kB] -Fetched 146 MB in 1s (116 MB/s) +Fetched 146 MB in 3s (56.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20084 files and directories currently installed.) @@ -1643,8 +1675,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Dec 25 20:53:43 UTC 2025. -Universal Time is now: Thu Dec 25 20:53:43 UTC 2025. +Local time is now: Fri Nov 22 14:36:16 UTC 2024. +Universal Time is now: Fri Nov 22 14:36:16 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:arm64 (1.17.0-2+b1) ... @@ -1954,7 +1986,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/rasmol-2.7.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../rasmol_2.7.6.0-3_source.changes +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/rasmol-2.7.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../rasmol_2.7.6.0-3_source.changes dpkg-buildpackage: info: source package rasmol dpkg-buildpackage: info: source version 2.7.6.0-3 dpkg-buildpackage: info: source distribution unstable @@ -2294,12 +2330,12 @@ echo >> gtkui.h echo "const gchar *sizechooser_str = \"\\" >> gtkui.h gtk-builder-convert -w sizechooser.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h -/bin/sh: 1: gtk-builder-convert: not found +/bin/sh: line 1: gtk-builder-convert: command not found echo "\";" >> gtkui.h echo >> gtkui.h echo "const gchar *print_resolution_str = \"\\" >> gtkui.h gtk-builder-convert -w printing-resolution.glade - | sed "s/$/\\\/" | sed 's/"/\\\"/g' >> gtkui.h -/bin/sh: 1: gtk-builder-convert: not found +/bin/sh: line 1: gtk-builder-convert: command not found echo "\";" >> gtkui.h echo >> gtkui.h gdk-pixbuf-csource --name=rasmol_icon --struct rasmol_48x48.xpm >> gtkui.h @@ -2385,7 +2421,7 @@ imake -DX11WIN -Uvector -DUseInstalled -I/usr/lib/X11/config In file included from /usr/lib/X11/config/Imake.tmpl:2293, from Imakefile.c:34: -/tmp/IIf.nBS1zl:125: warning: "X11WIN" redefined +/tmp/IIf.vY1MFo:125: warning: "X11WIN" redefined 125 | #define X11WIN :2: note: this is the location of the previous definition touch x11-stamp @@ -3559,12 +3595,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3307875/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3479771 and its subdirectories -I: Current time: Thu Dec 25 08:57:06 -12 2025 -I: pbuilder-time-stamp: 1766696226 +I: removing directory /srv/workspace/pbuilder/3307875 and its subdirectories +I: Current time: Sat Nov 23 04:47:18 +14 2024 +I: pbuilder-time-stamp: 1732286838 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/rasmol_2.7.6.0-3.diff: 66.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/rasmol_2.7.6.0-3.diff.gz b2/build.log: 89.6% -- replaced with stdout Compressing the 1st log... b1/build.log: 89.7% -- replaced with stdout Fri Nov 22 14:47:23 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_rasmol_unstable_arm64_1732286843 + touch /var/log/reproducible-builds/diffoscope_stamp_rasmol_unstable_arm64_1732286843 + RESULT=0 + systemd-run '--description=diffoscope on rasmol/2.7.6.0-3 in unstable/arm64' --slice=rb-build-diffoscope.slice -u rb-diffoscope-arm64_9-47403 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m --run-session -c jenkins-reproducible-unstable-diffoscope-b7ef0cfa-1c77-4c17-87fe-cb4e349bbbe7 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/dbd-tmp-y9XcUXg ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/rasmol_2.7.6.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/rasmol_2.7.6.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/rasmol_2.7.6.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1/rasmol_2.7.6.0-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2/rasmol_2.7.6.0-3_arm64.changes' + false + set +x Running as unit: rb-diffoscope-arm64_9-47403.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/rasmol_2.7.6.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/rasmol_2.7.6.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/rasmol_2.7.6.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b1/rasmol_2.7.6.0-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.aFAUBn1m/b2/rasmol_2.7.6.0-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.393s) 0.393s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.058s) 0.058s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 694ms CPU time consumed: 689ms _ _ __ __ _ ___ _ __ ___ ___ | | | '__/ _` / __| '_ ` _ \ / _ \| | | | | (_| \__ \ | | | | | (_) | | |_| \__,_|___/_| |_| |_|\___/|_| Fri Nov 22 14:47:24 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Fri Nov 22 14:47:24 UTC 2024 I: rasmol from unstable built successfully and reproducibly on arm64. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-22 14:47:25] INFO: Starting at 2024-11-22 14:47:25.089310 [2024-11-22 14:47:25] INFO: Generating the pages of 1 package(s) [2024-11-22 14:47:25] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/arm64/rasmol didn't produce a buildlog, even though it has been built. [2024-11-22 14:47:25] INFO: Finished at 2024-11-22 14:47:25.514625, took: 0:00:00.425321 Fri Nov 22 14:47:25 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/arm64/rasmol.html Fri Nov 22 14:47:25 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Nov 22 14:47:25 UTC 2024 I: Submitting 20K b1/rasmol_2.7.6.0-3_arm64.buildinfo.asc https://buildinfo.debian.net/82eeafdca7f645d7219c13fa1b5e3c9727b79bdb/rasmol_2.7.6.0-3_all Fri Nov 22 14:47:27 UTC 2024 I: Submitting 20K b2/rasmol_2.7.6.0-3_arm64.buildinfo.asc https://buildinfo.debian.net/2a52d2ed797e70e991d76d47e3e4448f9fd6498b/rasmol_2.7.6.0-3_all Fri Nov 22 14:47:28 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Nov 22 14:47:28 UTC 2024 I: Done submitting .buildinfo files. Fri Nov 22 14:47:28 UTC 2024 I: Removing signed rasmol_2.7.6.0-3_arm64.buildinfo.asc files: removed './b1/rasmol_2.7.6.0-3_arm64.buildinfo.asc' removed './b2/rasmol_2.7.6.0-3_arm64.buildinfo.asc' 1732286848 arm64 unstable rasmol Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/rasmol_2.7.6.0-3.rbuild.log: 89.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/arm64/rasmol_2.7.6.0-3.rbuild.log.gz [2024-11-22 14:47:28] INFO: Starting at 2024-11-22 14:47:28.398776 [2024-11-22 14:47:28] INFO: Generating the pages of 1 package(s) [2024-11-22 14:47:28] INFO: Finished at 2024-11-22 14:47:28.975842, took: 0:00:00.577083 All cleanup done. Fri Nov 22 14:47:29 UTC 2024 - total duration: 0h 17m 35s. Fri Nov 22 14:47:29 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-3JW9gWZA, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 17min 40.084s CPU time consumed: 8.434s