Running as unit: rb-build-armhf_17-10588.service ==================================================================================== Thu Nov 21 01:12:52 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_armhf_17) on jenkins, called using "virt32b-armhf-rb virt64b-armhf-rb" as arguments. Thu Nov 21 01:12:52 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-4XvAbbSW" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 01:12:52 UTC 2024 - checking /var/lib/jenkins/offline_nodes if virt32b-armhf-rb.debian.net is marked as down. Thu Nov 21 01:12:52 UTC 2024 - checking via ssh if virt32b-armhf-rb.debian.net is up. removed '/tmp/read-only-fs-test-c0rRWB' Thu Nov 21 01:12:55 UTC 2024 - checking /var/lib/jenkins/offline_nodes if virt64b-armhf-rb.debian.net is marked as down. Thu Nov 21 01:12:55 UTC 2024 - checking via ssh if virt64b-armhf-rb.debian.net is up. removed '/tmp/read-only-fs-test-OG6U97' ok, let's check if custodian is building anywhere yet… ok, custodian is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of custodian in trixie on armhf on jenkins now. 1st build will be done on virt32b-armhf-rb.debian.net. 2nd build will be done on virt64b-armhf-rb.debian.net. ============================================================================= Thu Nov 21 01:13:16 UTC 2024 I: starting to build custodian/trixie/armhf on jenkins on '2024-11-21 01:12' Thu Nov 21 01:13:16 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_17/10588/console.log 1732151596 armhf trixie custodian Thu Nov 21 01:13:16 UTC 2024 I: Downloading source for trixie/custodian=2024.6.24-1 --2024-11-21 01:13:17-- http://deb.debian.org/debian/pool/main/c/custodian/custodian_2024.6.24-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2322 (2.3K) [text/prs.lines.tag] Saving to: ‘custodian_2024.6.24-1.dsc’ 0K .. 100% 165M=0s 2024-11-21 01:13:17 (165 MB/s) - ‘custodian_2024.6.24-1.dsc’ saved [2322/2322] --2024-11-21 01:13:17-- http://deb.debian.org/debian/pool/main/c/custodian/custodian_2024.6.24-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2322 (2.3K) [text/prs.lines.tag] Saving to: ‘custodian_2024.6.24-1.dsc’ 0K .. 100% 165M=0s 2024-11-21 01:13:17 (165 MB/s) - ‘custodian_2024.6.24-1.dsc’ saved [2322/2322] Thu Nov 21 01:13:17 UTC 2024 I: custodian_2024.6.24-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: custodian Binary: python3-custodian, python-custodian-doc Architecture: all Version: 2024.6.24-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: https://github.com/materialsproject/custodian Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/debichem-team/custodian Vcs-Git: https://salsa.debian.org/debichem-team/custodian.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pymatgen, python3-pytest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-setuptools, python3-all, python3-psutil, python3-pymatgen, python3-pytest , python3-sphinx, python3-myst-parser Package-List: python-custodian-doc deb doc optional arch=all python3-custodian deb python optional arch=all Checksums-Sha1: c98f07a220e6732023b0df3ec7a99dc708576e0a 46582319 custodian_2024.6.24.orig.tar.gz 0ed591fde3cc4b2185729889546352c2c82ff73d 8232 custodian_2024.6.24-1.debian.tar.xz Checksums-Sha256: 04b0aad0c762533b7e956f06f8ac48abdd34b726e5bfef33ef264e1996df658b 46582319 custodian_2024.6.24.orig.tar.gz aa71c8adc183466f6fd905d0cca4a176b92da2977cd41a74d964a4c63606d482 8232 custodian_2024.6.24-1.debian.tar.xz Files: fd6a51dfc9c8b2bf038304a3aede560e 46582319 custodian_2024.6.24.orig.tar.gz 9e7d96c77eb6d15f79fadcbfb1de719a 8232 custodian_2024.6.24-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmaxYR8ACgkQVz7x5L1a Afr94Q/+MriF61BSHfwLrbU3OfaO7MtF9K8Rajlp0eji/1DHpO6wRaBEtY3kN6rE Bhe5G+u9VDYJRLy9tm2k1KqT6R8ovxTaFlk2MecdFigJdijHu4b1VIJ/Z2Ad/KTg MXzXWOKvdlxikwaYeCfOzGPL9xEu/whgiQ0efoQTeXTM45BYVDGNQ/+iUIWsMXRn VE8lqVTEpLvKHm79r0baZ4K2hMLdM/Y4RV5JrmgKBtfPNQlcXF2ZBho/1htHJ2tP XjTMjSXndc6vG5rJZrn3rceltSEMP3DJIEXdduGlsqVdIRabsYysP6Pk/QChN+ie mHAjffb3+nSsjX/pWCD7lT/5c8ZCrjEcZpHnTBmSAzvdLtFcPkStaOQqc5cW5cKW 56vWzwc+ejLEuhFY/SZwbDxzMJs5MPqxlJZWWsTe4XKRlb8+KWz0F3mx/suO3NHm i0YM8Z3V51FaV4YDEQpXrC3UlA1Q8dCpdUoon1CIulAClrAVTeYNpRbtkp1n9Uml as+3Bcn0TrBkq4wv4a24l1haD4/sPpB4PbdBs00Zb0Q8dc0+VgSp9oPA2nH2NocE bEyww7mZ1S/yHK8/hqa4sBxweeh9z10b7ra7SCZ5rXv5+Hp/w9nN7BqeoEMC3C4i ss5fACebHQZF/8nRg9gjWPsqg1Y90uFJwFkyOWg9M5bN4dnxj9U= =bvhZ -----END PGP SIGNATURE----- Thu Nov 21 01:13:17 UTC 2024 I: Checking whether the package is not for us Thu Nov 21 01:13:17 UTC 2024 I: Starting 1st build on remote node virt32b-armhf-rb.debian.net. Thu Nov 21 01:13:17 UTC 2024 I: Preparing to do remote build '1' on virt32b-armhf-rb.debian.net. Thu Nov 21 01:13:17 UTC 2024 - checking /var/lib/jenkins/offline_nodes if virt32b-armhf-rb.debian.net is marked as down. Thu Nov 21 01:13:17 UTC 2024 - checking via ssh if virt32b-armhf-rb.debian.net is up. removed '/tmp/read-only-fs-test-c7PHCN' ==================================================================================== Thu Nov 21 01:13:21 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on virt32b, called using "1 custodian trixie /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5 2024.6.24-1" as arguments. Thu Nov 21 01:13:21 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-YfZnic0i" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 01:13:22 UTC 2024 I: Downloading source for trixie/custodian=2024.6.24-1 Reading package lists... NOTICE: 'custodian' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/custodian.git Please use: git clone https://salsa.debian.org/debichem-team/custodian.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.6 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (dsc) [2322 B] Get:2 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (tar) [46.6 MB] Get:3 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (diff) [8232 B] Fetched 46.6 MB in 9s (5040 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'custodian' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/custodian.git Please use: git clone https://salsa.debian.org/debichem-team/custodian.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.6 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (dsc) [2322 B] Get:2 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (tar) [46.6 MB] Get:3 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (diff) [8232 B] Fetched 46.6 MB in 9s (5040 kB/s) Download complete and in download only mode ============================================================================= Building custodian in trixie on armhf on virt32b now. Date: Wed Nov 20 17:13:31 PST 2024 Date UTC: Thu Nov 21 01:13:31 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 20 13:13:32 -12 2024 I: pbuilder-time-stamp: 1732151612 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [custodian_2024.6.24-1.dsc] I: copying [./custodian_2024.6.24.orig.tar.gz] I: copying [./custodian_2024.6.24-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Aug 5 23:32:47 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./custodian_2024.6.24-1.dsc: no acceptable signature found dpkg-source: info: extracting custodian in custodian-2024.6.24 dpkg-source: info: unpacking custodian_2024.6.24.orig.tar.gz dpkg-source: info: unpacking custodian_2024.6.24-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying doc_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21225/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='c103cef6577a4601b9ab623d7cb1b332' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21225' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_SUkF --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1 --logfile b1/build.log custodian_2024.6.24-1.dsc' SUDO_GID='112' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32b 6.1.0-27-armmp-lpae #1 SMP Debian 6.1.115-1 (2024-11-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21225/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-setuptools, python3-all, python3-psutil, python3-pymatgen, python3-pytest, python3-sphinx, python3-myst-parser dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pymatgen; however: Package python3-pymatgen is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsymspg2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-annotated-types{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-bson{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dnspython{a} python3-docutils{a} python3-email-validator{a} python3-fastjsonschema{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jinja2{a} python3-joblib{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-monty{a} python3-more-itertools{a} python3-mpmath{a} python3-myst-parser{a} python3-nbformat{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-palettable{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-plotly{a} python3-pluggy{a} python3-psutil{a} python3-pybtex{a} python3-pydantic{a} python3-pydantic-core{a} python3-pygments{a} python3-pymatgen{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-spglib{a} python3-sphinx{a} python3-sympy{a} python3-tabulate{a} python3-tenacity{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-uncertainties{a} python3-urllib3{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils linux-sysctl-defaults lynx psmisc python-monty-doc python3-ase python3-bottleneck python3-bs4 python3-bson-ext python3-cryptography python3-cssselect python3-gdal python3-h2 python3-html5lib python3-httpcore python3-httpx python3-json-pointer python3-numexpr python3-odf python3-olefile python3-openbabel python3-openpyxl python3-pydot python3-pygraphviz python3-rfc3987 python3-simplejson python3-tables python3-uritemplate python3-vtk9 python3-webcolors shared-mime-info wget xdg-user-dirs 0 packages upgraded, 217 newly installed, 0 to remove and 0 not upgraded. Need to get 134 MB of archives. After unpacking 630 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.7-3 [800 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.7-3 [1808 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 12 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1819 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-2 [1348 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-11 [83.6 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libtcl8.6 armhf 8.6.15+dfsg-2 [934 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1+b1 [318 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1+b1 [371 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b2 [23.0 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.10-2 [337 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b2 [25.0 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libxft2 armhf 2.3.6-1+b2 [46.5 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libxss1 armhf 1:1.2.3-1+b2 [16.4 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libtk8.6 armhf 8.6.15-1 [697 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7 [481 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf blt armhf 2.5.3+dfsg-7 [6024 B] Get: 64 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-8 [517 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 70 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 84 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 74.1.2-2 [213 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf python3-zipp all 3.21.0-1 [10.6 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 74.1.2-2 [736 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20241024 [109 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf xml-core all 0.19 [20.1 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf fonts-lyx all 2.4.2.1-1 [190 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3+b1 [111 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-8 [263 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.2-2 [1326 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 10.0.1-1 [418 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libjson-perl all 4.10000-1 [87.5 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3+b1 [1828 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1+b2 [25.6 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf liblcms2-2 armhf 2.16-2 [131 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libopenjp2-7 armhf 2.5.0-2+b4 [179 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf libqhull-r8.0 armhf 2020.2-6+b2 [220 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b2 [11.8 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1+b1 [111 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf libsymspg2 armhf 2.5.0-1+b1 [184 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1+b1 [266 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf libwebpdemux2 armhf 1.4.0-0.1+b1 [110 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libwebpmux3 armhf 1.4.0-0.1+b1 [120 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libxslt1.1 armhf 1.1.35-1.1+b1 [212 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libyaml-0-2 armhf 0.2.5-1+b2 [45.4 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.1-1 [45.8 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf python3-toml all 0.10.2-1 [16.2 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf python3-wheel all 0.45.0-1 [56.7 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf python3-build all 1.2.2-1 [36.0 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf python-babel-localedata all 2.16.0-1 [5696 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 131 http://deb.debian.org/debian trixie/main armhf python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 132 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.12.6-1 [1040 B] Get: 133 http://deb.debian.org/debian trixie/main armhf python3-annotated-types all 0.7.0-1 [18.8 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf python3-appdirs all 1.4.4-4 [12.5 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf python3-attr all 23.2.0-2 [65.5 kB] Get: 136 http://deb.debian.org/debian trixie/main armhf python3-babel all 2.16.0-1 [114 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf python3-brotli armhf 1.1.0-2+b6 [302 kB] Get: 138 http://deb.debian.org/debian trixie/main armhf python3-bson all 4.10.1-2 [87.0 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 140 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf python3-charset-normalizer armhf 3.4.0-1+b1 [126 kB] Get: 142 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.26.4+ds-12 [3676 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf python3-contourpy armhf 1.3.0-2+b1 [217 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf python3-cycler all 0.12.1-1 [9496 B] Get: 145 http://deb.debian.org/debian trixie/main armhf python3-dateutil all 2.9.0-3 [79.3 kB] Get: 146 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf python3-dnspython all 2.6.1-1 [161 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf python3-roman all 4.2-1 [10.4 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf python3-idna all 3.8-2 [41.6 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf python3-email-validator all 2.2.0-1 [31.6 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 154 http://deb.debian.org/debian trixie/main armhf python3-tz all 2024.1-2 [30.9 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf python3-six all 1.16.0-7 [16.4 kB] Get: 156 http://deb.debian.org/debian trixie/main armhf python3-fs all 2.4.16-4 [95.4 kB] Get: 157 http://deb.debian.org/debian trixie/main armhf python3-lxml armhf 5.3.0-1+b1 [1468 kB] Get: 158 http://deb.debian.org/debian trixie/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b5 [24.0 kB] Get: 159 http://deb.debian.org/debian trixie/main armhf python3-scipy armhf 1.13.1-6 [17.6 MB] Get: 160 http://deb.debian.org/debian trixie/main armhf python3-mpmath all 1.3.0-1 [419 kB] Get: 161 http://deb.debian.org/debian trixie/main armhf python3-sympy all 1.13.3-1 [4147 kB] Get: 162 http://deb.debian.org/debian trixie/main armhf python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 163 http://deb.debian.org/debian trixie/main armhf unicode-data all 15.1.0-1 [8547 kB] Get: 164 http://deb.debian.org/debian trixie/main armhf python3-fonttools armhf 4.54.1-4+b1 [1527 kB] Get: 165 http://deb.debian.org/debian trixie/main armhf python3-imagesize all 1.4.1-1 [6688 B] Get: 166 http://deb.debian.org/debian trixie/main armhf python3-iniconfig all 1.1.1-2 [6396 B] Get: 167 http://deb.debian.org/debian trixie/main armhf python3-markupsafe armhf 2.1.5-1+b2 [13.4 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf python3-jinja2 all 3.1.3-1 [119 kB] Get: 169 http://deb.debian.org/debian trixie/main armhf python3-joblib all 1.3.2-5 [216 kB] Get: 170 http://deb.debian.org/debian trixie/main armhf python3-rpds-py armhf 0.21.0-2 [255 kB] Get: 171 http://deb.debian.org/debian trixie/main armhf python3-referencing all 0.35.1-1 [23.5 kB] Get: 172 http://deb.debian.org/debian trixie/main armhf python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 173 http://deb.debian.org/debian trixie/main armhf python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 174 http://deb.debian.org/debian trixie/main armhf python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 175 http://deb.debian.org/debian trixie/main armhf python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 176 http://deb.debian.org/debian trixie/main armhf python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 177 http://deb.debian.org/debian trixie/main armhf python3-kiwisolver armhf 1.4.7-2+b1 [64.9 kB] Get: 178 http://deb.debian.org/debian trixie/main armhf python3-latexcodec all 3.0.0-1 [17.5 kB] Get: 179 http://deb.debian.org/debian trixie/main armhf python3-mdurl all 0.1.2-1 [9444 B] Get: 180 http://deb.debian.org/debian trixie/main armhf python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 181 http://deb.debian.org/debian trixie/main armhf python3-pil armhf 10.4.0-1+b1 [478 kB] Get: 182 http://deb.debian.org/debian trixie/main armhf python3.12-tk armhf 3.12.7-3 [109 kB] Get: 183 http://deb.debian.org/debian trixie/main armhf python3.13-tk armhf 3.13.0-2 [99.7 kB] Get: 184 http://deb.debian.org/debian trixie/main armhf python3-tk armhf 3.12.7-1 [9444 B] Get: 185 http://deb.debian.org/debian trixie/main armhf python3-pil.imagetk armhf 10.4.0-1+b1 [79.3 kB] Get: 186 http://deb.debian.org/debian trixie/main armhf python3-pyparsing all 3.1.2-1 [146 kB] Get: 187 http://deb.debian.org/debian trixie/main armhf python3-matplotlib armhf 3.8.3-3+b1 [5579 kB] Get: 188 http://deb.debian.org/debian trixie/main armhf python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 189 http://deb.debian.org/debian trixie/main armhf python3-pandas-lib armhf 2.2.3+dfsg-5+b1 [6440 kB] Get: 190 http://deb.debian.org/debian trixie/main armhf python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 191 http://deb.debian.org/debian trixie/main armhf python3-pydantic-core armhf 2.23.4-2+b2 [1399 kB] Get: 192 http://deb.debian.org/debian trixie/main armhf python3-pydantic armhf 2.9.2-2 [343 kB] Get: 193 http://deb.debian.org/debian trixie/main armhf python3-tqdm all 4.67.0-1 [90.2 kB] Get: 194 http://deb.debian.org/debian trixie/main armhf python3-monty all 2024.7.29-1 [43.1 kB] Get: 195 http://deb.debian.org/debian trixie/main armhf sphinx-common all 7.4.7-4 [731 kB] Get: 196 http://deb.debian.org/debian trixie/main armhf python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 197 http://deb.debian.org/debian trixie/main armhf python3-urllib3 all 2.0.7-2 [111 kB] Get: 198 http://deb.debian.org/debian trixie/main armhf python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 199 http://deb.debian.org/debian trixie/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 200 http://deb.debian.org/debian trixie/main armhf python3-sphinx all 7.4.7-4 [588 kB] Get: 201 http://deb.debian.org/debian trixie/main armhf python3-yaml armhf 6.0.2-1+b1 [158 kB] Get: 202 http://deb.debian.org/debian trixie/main armhf python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 203 http://deb.debian.org/debian trixie/main armhf python3-nbformat all 5.9.1-1 [45.1 kB] Get: 204 http://deb.debian.org/debian trixie/main armhf python3-networkx all 3.2.1-4 [14.2 MB] Get: 205 http://deb.debian.org/debian trixie/main armhf python3-palettable all 3.3.3-1 [69.7 kB] Get: 206 http://deb.debian.org/debian trixie/main armhf python3-tenacity all 8.4.2+really8.4.1-1 [46.0 kB] Get: 207 http://deb.debian.org/debian trixie/main armhf python3-plotly all 5.20.0+dfsg-1 [2726 kB] Get: 208 http://deb.debian.org/debian trixie/main armhf python3-pluggy all 1.5.0-1 [26.9 kB] Get: 209 http://deb.debian.org/debian trixie/main armhf python3-psutil armhf 5.9.8-2 [225 kB] Get: 210 http://deb.debian.org/debian trixie/main armhf python3-pybtex all 0.24.0-4 [74.6 kB] Get: 211 http://deb.debian.org/debian trixie/main armhf python3-ruamel.yaml.clib armhf 0.2.8+ds-2+b1 [149 kB] Get: 212 http://deb.debian.org/debian trixie/main armhf python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get: 213 http://deb.debian.org/debian trixie/main armhf python3-spglib armhf 2.5.0-1+b1 [51.1 kB] Get: 214 http://deb.debian.org/debian trixie/main armhf python3-tabulate all 0.9.0-1 [45.9 kB] Get: 215 http://deb.debian.org/debian trixie/main armhf python3-uncertainties all 3.2.2-1 [54.7 kB] Get: 216 http://deb.debian.org/debian trixie/main armhf python3-pymatgen armhf 2024.10.29+dfsg1-3+b1 [2561 kB] Get: 217 http://deb.debian.org/debian trixie/main armhf python3-pytest all 8.3.3-1 [249 kB] Fetched 134 MB in 4s (30.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.7-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_armhf.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:armhf (3.12.7-3) ... Setting up libexpat1:armhf (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20010 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_armhf.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ... Unpacking libkrb5support0:armhf (1.21.3-3) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../06-libk5crypto3_1.21.3-3_armhf.deb ... Unpacking libk5crypto3:armhf (1.21.3-3) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../07-libkeyutils1_1.6.3-4_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-4) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../08-libkrb5-3_1.21.3-3_armhf.deb ... Unpacking libkrb5-3:armhf (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:armhf. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_armhf.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21072 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_armhf.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.3.2-2_armhf.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../008-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.22.5-2_armhf.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-5_armhf.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. 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Unpacking libxcb1:armhf (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../032-libx11-data_2%3a1.8.10-2_all.deb ... Unpacking libx11-data (2:1.8.10-2) ... Selecting previously unselected package libx11-6:armhf. Preparing to unpack .../033-libx11-6_2%3a1.8.10-2_armhf.deb ... Unpacking libx11-6:armhf (2:1.8.10-2) ... Selecting previously unselected package libxrender1:armhf. Preparing to unpack .../034-libxrender1_1%3a0.9.10-1.1+b2_armhf.deb ... Unpacking libxrender1:armhf (1:0.9.10-1.1+b2) ... Selecting previously unselected package libxft2:armhf. Preparing to unpack .../035-libxft2_2.3.6-1+b2_armhf.deb ... Unpacking libxft2:armhf (2.3.6-1+b2) ... Selecting previously unselected package libxext6:armhf. Preparing to unpack .../036-libxext6_2%3a1.3.4-1+b2_armhf.deb ... Unpacking libxext6:armhf (2:1.3.4-1+b2) ... Selecting previously unselected package x11-common. Preparing to unpack .../037-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package libxss1:armhf. Preparing to unpack .../038-libxss1_1%3a1.2.3-1+b2_armhf.deb ... Unpacking libxss1:armhf (1:1.2.3-1+b2) ... Selecting previously unselected package libtk8.6:armhf. Preparing to unpack .../039-libtk8.6_8.6.15-1_armhf.deb ... Unpacking libtk8.6:armhf (8.6.15-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../040-tk8.6-blt2.5_2.5.3+dfsg-7_armhf.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... Selecting previously unselected package blt. Preparing to unpack .../041-blt_2.5.3+dfsg-7_armhf.deb ... Unpacking blt (2.5.3+dfsg-7) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../042-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../043-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... 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Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../050-libicu72_72.1-5+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-5+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../051-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_armhf.deb ... Unpacking libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../052-gettext_0.22.5-2_armhf.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../053-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../054-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../055-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../056-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../057-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../058-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../059-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../060-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. 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Unpacking python3-requests (2.32.3+dfsg-1) ... Selecting previously unselected package python3-snowballstemmer. Preparing to unpack .../177-python3-snowballstemmer_2.2.0-4_all.deb ... Unpacking python3-snowballstemmer (2.2.0-4) ... Selecting previously unselected package python3-sphinx. Preparing to unpack .../178-python3-sphinx_7.4.7-4_all.deb ... Unpacking python3-sphinx (7.4.7-4) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../179-python3-yaml_6.0.2-1+b1_armhf.deb ... Unpacking python3-yaml (6.0.2-1+b1) ... Selecting previously unselected package python3-myst-parser. Preparing to unpack .../180-python3-myst-parser_4.0.0-1_all.deb ... Unpacking python3-myst-parser (4.0.0-1) ... Selecting previously unselected package python3-nbformat. Preparing to unpack .../181-python3-nbformat_5.9.1-1_all.deb ... Unpacking python3-nbformat (5.9.1-1) ... Selecting previously unselected package python3-networkx. 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Selecting previously unselected package python3-pybtex. Preparing to unpack .../188-python3-pybtex_0.24.0-4_all.deb ... Unpacking python3-pybtex (0.24.0-4) ... Selecting previously unselected package python3-ruamel.yaml.clib:armhf. Preparing to unpack .../189-python3-ruamel.yaml.clib_0.2.8+ds-2+b1_armhf.deb ... Unpacking python3-ruamel.yaml.clib:armhf (0.2.8+ds-2+b1) ... Selecting previously unselected package python3-ruamel.yaml. Preparing to unpack .../190-python3-ruamel.yaml_0.18.6+ds-3_all.deb ... Unpacking python3-ruamel.yaml (0.18.6+ds-3) ... Selecting previously unselected package python3-spglib. Preparing to unpack .../191-python3-spglib_2.5.0-1+b1_armhf.deb ... Unpacking python3-spglib (2.5.0-1+b1) ... Selecting previously unselected package python3-tabulate. Preparing to unpack .../192-python3-tabulate_0.9.0-1_all.deb ... Unpacking python3-tabulate (0.9.0-1) ... Selecting previously unselected package python3-uncertainties. Preparing to unpack .../193-python3-uncertainties_3.2.2-1_all.deb ... Unpacking python3-uncertainties (3.2.2-1) ... Selecting previously unselected package python3-pymatgen. Preparing to unpack .../194-python3-pymatgen_2024.10.29+dfsg1-3+b1_armhf.deb ... Unpacking python3-pymatgen (2024.10.29+dfsg1-3+b1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../195-python3-pytest_8.3.3-1_all.deb ... Unpacking python3-pytest (8.3.3-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libgraphite2-3:armhf (1.3.14-2+b1) ... Setting up liblcms2-2:armhf (2.16-2) ... Setting up libsharpyuv0:armhf (1.4.0-0.1+b1) ... Setting up libxau6:armhf (1:1.0.11-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3+b2) ... Setting up libkeyutils1:armhf (1.6.3-4) ... Setting up libxcb1:armhf (1.17.0-2+b1) ... Setting up libicu72:armhf (72.1-5+b1) ... Setting up liblerc4:armhf (4.0.0+ds-5) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.5-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:armhf (1.1.0-2+b6) ... Setting up libmagic1t64:armhf (1:5.45-3+b1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:armhf (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:armhf (2020.2-6+b2) ... Setting up libcom-err2:armhf (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:armhf (2.1-6.1+b2) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up python-babel-localedata (2.16.0-1) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Nov 21 01:14:58 UTC 2024. Universal Time is now: Thu Nov 21 01:14:58 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up libsymspg2:armhf (2.5.0-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:armhf (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libjpeg62-turbo:armhf (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libfribidi0:armhf (1.0.15-1) ... Setting up libimagequant0:armhf (2.18.0-1+b2) ... Setting up libproc2-0:armhf (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:armhf (1.6.44-2) ... Setting up libtcl8.6:armhf (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:armhf (1.21.3-3) ... Setting up libgfortran5:armhf (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:armhf (1.4.0-0.1+b1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:armhf (4.5.1+git230720-5) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libjson-perl (4.10000-1) ... Setting up libopenjp2-7:armhf (2.5.0-2+b4) ... Setting up libx11-6:armhf (2:1.8.10-2) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:armhf (1.21.3-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:armhf (1.4.0-0.1+b1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:armhf (1.4.0-0.1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:armhf (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:armhf (10.0.1-1) ... Setting up libxss1:armhf (1:1.2.3-1+b2) ... Setting up libfontconfig1:armhf (2.15.0-1.1+b1) ... Setting up liblbfgsb0:armhf (3.0+dfsg.4-1+b2) ... Setting up libxft2:armhf (2.3.6-1+b2) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:armhf (8.6.15-1) ... Setting up python3.12-tk (3.12.7-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3.13-tk (3.13.0-2) ... Setting up libraqm0:armhf (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libnsl2:armhf (1.3.0-3+b3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libpython3.12-stdlib:armhf (3.12.7-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b2) ... Setting up python3-wheel (0.45.0-1) ... Setting up python3-annotated-types (0.7.0-1) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-bson (4.10.1-2) ... Setting up python3-pil:armhf (10.4.0-1+b1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2+b1) ... Setting up python3-idna (3.8-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.21.0-2) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:armhf (5.3.0-1+b1) ... Setting up python3-dnspython (2.6.1-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-email-validator (2.2.0-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pydantic-core (2.23.4-2+b2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b5) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-tenacity (8.4.2+really8.4.1-1) ... Setting up python3-tqdm (4.67.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-ruamel.yaml.clib:armhf (0.2.8+ds-2+b1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-latexcodec (3.0.0-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:armhf (3.12.7-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:armhf (10.4.0-1+b1) ... Setting up python3-pydantic (2.9.2-2) ... Setting up python3-ruamel.yaml (0.18.6+ds-3) ... Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-joblib (1.3.2-5) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-networkx (3.2.1-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-palettable (3.3.3-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up python3-pybtex (0.24.0-4) ... Setting up python3-contourpy (1.3.0-2+b1) ... Setting up python3-spglib (2.5.0-1+b1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-uncertainties (3.2.2-1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-6) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5+b1) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-monty (2024.7.29-1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-plotly (5.20.0+dfsg-1) ... Setting up python3-fonttools (4.54.1-4+b1) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up python3-pymatgen (2024.10.29+dfsg1-3+b1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-myst-parser (4.0.0-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/custodian-2024.6.24/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../custodian_2024.6.24-1_source.changes dpkg-buildpackage: info: source package custodian dpkg-buildpackage: info: source version 2024.6.24-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from custodian-2024.6.24/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' dh_clean --exclude=tests/files make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' debian/rules binary dh binary --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/custodian copying custodian/custodian.py -> build/lib/custodian copying custodian/utils.py -> build/lib/custodian copying custodian/__init__.py -> build/lib/custodian creating build/lib/custodian/ansible copying custodian/ansible/actions.py -> build/lib/custodian/ansible copying custodian/ansible/interpreter.py -> build/lib/custodian/ansible copying custodian/ansible/__init__.py -> build/lib/custodian/ansible creating build/lib/custodian/qchem copying custodian/qchem/handlers.py -> build/lib/custodian/qchem copying custodian/qchem/jobs.py -> build/lib/custodian/qchem copying custodian/qchem/utils.py -> build/lib/custodian/qchem copying custodian/qchem/__init__.py -> build/lib/custodian/qchem creating build/lib/custodian/vasp copying custodian/vasp/handlers.py -> build/lib/custodian/vasp copying custodian/vasp/interpreter.py -> build/lib/custodian/vasp copying custodian/vasp/jobs.py -> build/lib/custodian/vasp copying custodian/vasp/utils.py -> build/lib/custodian/vasp copying custodian/vasp/__init__.py -> build/lib/custodian/vasp copying custodian/vasp/validators.py -> build/lib/custodian/vasp copying custodian/vasp/io.py -> build/lib/custodian/vasp creating build/lib/custodian/nwchem copying custodian/nwchem/handlers.py -> build/lib/custodian/nwchem copying custodian/nwchem/jobs.py -> build/lib/custodian/nwchem copying custodian/nwchem/__init__.py -> build/lib/custodian/nwchem creating build/lib/custodian/cp2k copying custodian/cp2k/handlers.py -> build/lib/custodian/cp2k copying custodian/cp2k/interpreter.py -> build/lib/custodian/cp2k copying custodian/cp2k/jobs.py -> build/lib/custodian/cp2k copying custodian/cp2k/utils.py -> build/lib/custodian/cp2k copying custodian/cp2k/__init__.py -> build/lib/custodian/cp2k copying custodian/cp2k/validators.py -> build/lib/custodian/cp2k creating build/lib/custodian/cli copying custodian/cli/cstdn.py -> build/lib/custodian/cli copying custodian/cli/run_nwchem.py -> build/lib/custodian/cli copying custodian/cli/run_vasp.py -> build/lib/custodian/cli copying custodian/cli/converge_kpoints.py -> build/lib/custodian/cli copying custodian/cli/__init__.py -> build/lib/custodian/cli copying custodian/cli/converge_geometry.py -> build/lib/custodian/cli creating build/lib/custodian/feff copying custodian/feff/handlers.py -> build/lib/custodian/feff copying custodian/feff/interpreter.py -> build/lib/custodian/feff copying custodian/feff/jobs.py -> build/lib/custodian/feff copying custodian/feff/__init__.py -> build/lib/custodian/feff creating build/lib/custodian/lobster copying custodian/lobster/handlers.py -> build/lib/custodian/lobster copying custodian/lobster/jobs.py -> build/lib/custodian/lobster copying custodian/lobster/__init__.py -> build/lib/custodian/lobster creating build/lib/custodian/gaussian copying custodian/gaussian/handlers.py -> build/lib/custodian/gaussian copying custodian/gaussian/jobs.py -> build/lib/custodian/gaussian copying custodian/gaussian/__init__.py -> build/lib/custodian/gaussian running egg_info creating custodian.egg-info writing custodian.egg-info/PKG-INFO writing dependency_links to custodian.egg-info/dependency_links.txt writing entry points to custodian.egg-info/entry_points.txt writing requirements to custodian.egg-info/requires.txt writing top-level names to custodian.egg-info/top_level.txt writing manifest file 'custodian.egg-info/SOURCES.txt' reading manifest file 'custodian.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'custodian.egg-info/SOURCES.txt' installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/custodian creating build/bdist.linux-armv7l/wheel/custodian/ansible copying build/lib/custodian/ansible/actions.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/custodian.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/qchem copying build/lib/custodian/qchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/utils.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/vasp copying build/lib/custodian/vasp/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/io.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp creating build/bdist.linux-armv7l/wheel/custodian/nwchem copying build/lib/custodian/nwchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/cp2k copying build/lib/custodian/cp2k/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k creating build/bdist.linux-armv7l/wheel/custodian/cli copying build/lib/custodian/cli/cstdn.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/run_nwchem.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/run_vasp.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/converge_kpoints.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/converge_geometry.py -> build/bdist.linux-armv7l/wheel/./custodian/cli creating build/bdist.linux-armv7l/wheel/custodian/feff copying build/lib/custodian/feff/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/feff creating build/bdist.linux-armv7l/wheel/custodian/lobster copying build/lib/custodian/lobster/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster copying build/lib/custodian/lobster/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster copying build/lib/custodian/lobster/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster creating build/bdist.linux-armv7l/wheel/custodian/gaussian copying build/lib/custodian/gaussian/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian copying build/lib/custodian/gaussian/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian copying build/lib/custodian/gaussian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian running install_egg_info Copying custodian.egg-info to build/bdist.linux-armv7l/wheel/./custodian-2024.6.24.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/custodian-2024.6.24.dist-info/WHEEL creating '/build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/.tmp-94x5lnt0/custodian-2024.6.24-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'custodian/__init__.py' adding 'custodian/custodian.py' adding 'custodian/utils.py' adding 'custodian/ansible/__init__.py' adding 'custodian/ansible/actions.py' adding 'custodian/ansible/interpreter.py' adding 'custodian/cli/__init__.py' adding 'custodian/cli/converge_geometry.py' adding 'custodian/cli/converge_kpoints.py' adding 'custodian/cli/cstdn.py' adding 'custodian/cli/run_nwchem.py' adding 'custodian/cli/run_vasp.py' adding 'custodian/cp2k/__init__.py' adding 'custodian/cp2k/handlers.py' adding 'custodian/cp2k/interpreter.py' adding 'custodian/cp2k/jobs.py' adding 'custodian/cp2k/utils.py' adding 'custodian/cp2k/validators.py' adding 'custodian/feff/__init__.py' adding 'custodian/feff/handlers.py' adding 'custodian/feff/interpreter.py' adding 'custodian/feff/jobs.py' adding 'custodian/gaussian/__init__.py' adding 'custodian/gaussian/handlers.py' adding 'custodian/gaussian/jobs.py' adding 'custodian/lobster/__init__.py' adding 'custodian/lobster/handlers.py' adding 'custodian/lobster/jobs.py' adding 'custodian/nwchem/__init__.py' adding 'custodian/nwchem/handlers.py' adding 'custodian/nwchem/jobs.py' adding 'custodian/qchem/__init__.py' adding 'custodian/qchem/handlers.py' adding 'custodian/qchem/jobs.py' adding 'custodian/qchem/utils.py' adding 'custodian/vasp/__init__.py' adding 'custodian/vasp/handlers.py' adding 'custodian/vasp/interpreter.py' adding 'custodian/vasp/io.py' adding 'custodian/vasp/jobs.py' adding 'custodian/vasp/utils.py' adding 'custodian/vasp/validators.py' adding 'custodian-2024.6.24.dist-info/LICENSE' adding 'custodian-2024.6.24.dist-info/METADATA' adding 'custodian-2024.6.24.dist-info/WHEEL' adding 'custodian-2024.6.24.dist-info/entry_points.txt' adding 'custodian-2024.6.24.dist-info/top_level.txt' adding 'custodian-2024.6.24.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Successfully built custodian-2024.6.24-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' PYTHONPATH=. python3 -m sphinx -N -bhtml \ docs/ .pybuild/docs/html # HTML generator Running Sphinx v7.4.7 loading translations [en]... done making output directory... done WARNING: html_static_path entry '_static' does not exist myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 45 source files that are out of date updating environment: [new config] 45 added, 0 changed, 0 removed reading sources... 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[100%] index /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:16: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:21: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:22: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.add_to_set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:23: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.inc' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:24: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pop' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:25: WARNING: local id not found in doc 'custodian.ansible.actions': 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'custodian.ansible.actions.FileActions.file_modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:37: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_move' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:38: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.get_nested_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:40: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:41: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:42: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify_object' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:103: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:112: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:113: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:115: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:116: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.double_job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:117: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.gga_static_to_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:118: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:119: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.pre_screen_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:120: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:121: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:122: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:124: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_diag' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:125: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:126: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.can_use_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:127: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.cleanup_input' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:128: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.get_conv' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:129: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.restart' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:130: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.tail' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:132: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:133: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:134: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:135: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:136: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:137: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:138: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:139: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:140: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:141: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:144: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:152: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:153: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:154: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:155: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:157: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:158: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:160: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:161: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:162: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:163: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:166: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:174: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:175: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:176: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:177: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:178: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:179: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:181: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:182: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:183: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:184: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:187: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:192: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:193: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:194: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:196: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:197: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:198: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:199: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:202: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:215: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.perturb_coordinates' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:216: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.vector_list_diff' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:219: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:233: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:234: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:235: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:236: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:237: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:238: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:239: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:240: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:241: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:242: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:243: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:244: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:245: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:246: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:247: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:248: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:249: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:250: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:251: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:252: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:253: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:254: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:255: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:256: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:257: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:258: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:259: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:260: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:261: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:262: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:263: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:264: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:265: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:266: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:267: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:268: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:269: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:270: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.from_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:271: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:272: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:273: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:274: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:275: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:276: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:277: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:278: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:279: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:280: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:281: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:282: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:283: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:284: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:285: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:286: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:287: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:288: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:289: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:290: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:291: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:292: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:293: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:294: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:295: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:296: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:297: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:298: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:299: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:300: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:301: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:302: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:303: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:304: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:305: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:306: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:307: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:308: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:310: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:311: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:313: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:314: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:315: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:316: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:317: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:318: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.constrained_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:319: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.double_relaxation_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:320: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.full_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:321: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.metagga_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:322: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:323: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:324: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:325: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:326: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:327: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:328: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:329: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:331: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:332: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:333: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:334: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:335: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:336: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:337: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:338: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:339: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.check_broken_chgcar' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:341: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:342: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.LOG_FILE' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:343: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.from_spec' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:344: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:345: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.run_interrupted' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:346: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.CustodianError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:347: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:348: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:349: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:350: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:351: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:352: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.max_num_corrections' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:353: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.n_applied_corrections' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:354: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.raise_on_max' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:355: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:356: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:357: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.name' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:358: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:359: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:360: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:361: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:362: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:363: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsPerHandlerError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:364: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsPerJobError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:365: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.NonRecoverableError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:366: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ReturnCodeError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:367: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ValidationError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:368: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:369: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:371: WARNING: local id not found in doc 'custodian.utils': 'custodian.utils.backup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:372: WARNING: local id not found in doc 'custodian.utils': 'custodian.utils.get_execution_host_info' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:20: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:25: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:26: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.add_to_set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:27: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.inc' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:28: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pop' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:29: WARNING: local id 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'custodian.ansible.actions.DictActions.set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:35: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.unset' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:36: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:37: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_copy' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:38: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_create' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:39: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_delete' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:40: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:41: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_move' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:42: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.get_nested_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:44: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:45: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:46: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify_object' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.interpreter.md:39: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:12: WARNING: local id not found in doc 'custodian.cli.converge_geometry': 'custodian.cli.converge_geometry.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:13: WARNING: local id not found in doc 'custodian.cli.converge_geometry': 'custodian.cli.converge_geometry.get_runs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:15: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:16: 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/build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:24: WARNING: local id not found in doc 'custodian.cli.run_nwchem': 'custodian.cli.run_nwchem.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:26: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:27: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.get_jobs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:28: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.load_class' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:29: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:22: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:23: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:25: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:26: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.double_job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:27: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.gga_static_to_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:28: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:29: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.pre_screen_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:30: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:31: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:32: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:34: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_diag' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:35: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:36: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.can_use_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:37: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.cleanup_input' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:38: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.get_conv' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:39: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.restart' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:40: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.tail' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:42: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:43: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:44: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:45: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:46: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:47: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:48: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:49: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:50: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:51: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.interpreter.md:23: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.validators.md:41: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:21: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:22: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:23: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:24: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:26: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:27: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:29: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:30: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:31: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:32: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.handlers.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.interpreter.md:19: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:13: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:14: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.GRID_NAMES' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:15: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.MEM_UNITS' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:16: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.activate_better_guess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:17: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:18: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.conv_criteria' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:19: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.convert_mem' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:20: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:21: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.error_defs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:22: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.error_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:23: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.grid_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:24: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.recom_mem_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:25: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:26: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:27: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:28: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:30: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:31: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.generate_better_guess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:32: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:33: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:34: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:35: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:21: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:22: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:23: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:24: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:25: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:26: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:28: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:29: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:30: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:31: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:27: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:42: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:18: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:19: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:20: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:22: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:23: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:24: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:25: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.handlers.md:14: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:26: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.perturb_coordinates' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:27: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.vector_list_diff' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:27: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:28: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:29: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:30: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:31: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:32: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:33: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:34: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:35: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:36: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:37: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:38: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:39: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:40: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:41: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:42: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:43: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:44: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:45: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:46: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:47: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:48: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:49: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:50: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:51: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:52: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:53: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:54: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:55: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:56: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:57: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:58: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:59: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:60: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:61: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:62: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:63: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:64: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.from_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:65: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:66: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:67: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:68: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:69: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:70: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:71: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:72: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:73: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:74: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:75: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:76: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:77: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:78: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:79: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:80: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:81: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:82: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:83: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:84: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:85: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:86: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:87: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:88: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:89: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:90: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:91: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:92: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:93: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:94: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:95: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:96: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:97: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:98: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:99: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:100: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:101: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:102: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:104: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:105: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:107: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:108: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:109: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:110: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:111: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:112: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.constrained_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:113: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.double_relaxation_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:114: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.full_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:115: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.metagga_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:116: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:117: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:118: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:119: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:120: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:121: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:122: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:123: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:125: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:126: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:127: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:128: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:129: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:130: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:131: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:132: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:133: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.check_broken_chgcar' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:15: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:24: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:50: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:98: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:117: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:125: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:152: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:185: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:212: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:222: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:248: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:257: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:283: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:322: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:353: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:389: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:422: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:432: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:458: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:502: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:532: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:540: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:595: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.interpreter.md:20: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.jobs.md:38: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:25: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:41: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:54: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' generating indices... genindex done writing additional pages... search done copying images... [100%] assets/custodian_logo.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 538 warnings. The HTML pages are in .pybuild/docs/html. make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' rm -rf .pybuild/tests cp -r tests .pybuild # pymatgen is needed for tests but # spglib is only available on the default python version CUSTODIAN_TEST_DIR=/build/reproducible-path/custodian-2024.6.24/.pybuild/tests pybuild --test --test-pytest -p 3.12 \ --test-args='-k "not (test_fileman_cpscf_nseg_error or test_gdm_neg_precon_error or test_OptFF or test_first_step)"' I: pybuild base:311: cd /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/build; python3.12 -m pytest -k "not (test_fileman_cpscf_nseg_error or test_gdm_neg_precon_error or test_OptFF or test_first_step)" ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 178 items / 16 deselected / 1 skipped / 162 selected tests/ansible/test_interpreter.py .... [ 2%] tests/cp2k/test_handlers.py ........ [ 7%] tests/cp2k/test_jobs.py .. [ 8%] tests/feff/test_handlers.py . [ 9%] tests/feff/test_jobs.py ... [ 11%] tests/gaussian/test_handlers.py ...................... [ 24%] tests/gaussian/test_jobs.py .. [ 25%] tests/lobster/test_handlers.py .......... [ 32%] tests/lobster/test_jobs.py ... [ 33%] tests/nwchem/test_handlers.py . [ 34%] tests/qchem/test_jobs.py sss [ 36%] tests/test_custodian.py .......... [ 42%] tests/test_utils.py . [ 43%] tests/vasp/test_handlers.py ............................................ [ 70%] ........................... [ 87%] tests/vasp/test_io.py .. [ 88%] tests/vasp/test_jobs.py .......... [ 94%] tests/vasp/test_utils.py .. [ 95%] tests/vasp/test_validators.py ....... [100%] ========== 159 passed, 4 skipped, 16 deselected in 447.23s (0:07:27) =========== make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-custodian-doc. If the default is wrong, please use --doc-main-package debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' for f in `find debian/python-custodian-doc/usr/share/doc/python-custodian-doc/html -name *.html`; do \ sed "s|.google-analytics.com/ga.js|privacy/ga.js|g" -i $f; \ done make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' dh_sphinxdoc -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package python-custodian-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-custodian-doc' in '../python-custodian-doc_2024.6.24-1_all.deb'. dpkg-deb: building package 'python3-custodian' in '../python3-custodian_2024.6.24-1_all.deb'. dpkg-genbuildinfo --build=binary -O../custodian_2024.6.24-1_armhf.buildinfo dpkg-genchanges --build=binary -O../custodian_2024.6.24-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from custodian-2024.6.24/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21225 and its subdirectories I: Current time: Wed Nov 20 13:26:54 -12 2024 I: pbuilder-time-stamp: 1732152414 Thu Nov 21 01:26:54 UTC 2024 I: Signing ./b1/custodian_2024.6.24-1_armhf.buildinfo as custodian_2024.6.24-1_armhf.buildinfo.asc Thu Nov 21 01:26:55 UTC 2024 I: Signed ./b1/custodian_2024.6.24-1_armhf.buildinfo as ./b1/custodian_2024.6.24-1_armhf.buildinfo.asc Thu Nov 21 01:26:55 UTC 2024 - build #1 for custodian/trixie/armhf on virt32b done. Starting cleanup. All cleanup done. Thu Nov 21 01:26:55 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-YfZnic0i, removing. /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 01:28 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 01:13 b2 -rw-r--r-- 1 jenkins jenkins 2322 Aug 5 23:43 custodian_2024.6.24-1.dsc -rw------- 1 jenkins jenkins 3460 Nov 21 01:13 rbuildlog.aojmA8K /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1: total 46072 -rw-r--r-- 1 jenkins jenkins 201147 Nov 21 01:26 build.log -rw-r--r-- 1 jenkins jenkins 8232 Nov 21 01:26 custodian_2024.6.24-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2322 Nov 21 01:26 custodian_2024.6.24-1.dsc -rw-r--r-- 1 jenkins jenkins 11033 Nov 21 01:26 custodian_2024.6.24-1_armhf.buildinfo -rw-r--r-- 1 jenkins jenkins 11915 Nov 21 01:26 custodian_2024.6.24-1_armhf.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1720 Nov 21 01:26 custodian_2024.6.24-1_armhf.changes -rw-r--r-- 1 jenkins jenkins 1722 Nov 21 01:26 custodian_2024.6.24-1_source.changes -rw-r--r-- 1 jenkins jenkins 46582319 Nov 21 01:28 custodian_2024.6.24.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 184348 Nov 21 01:28 python-custodian-doc_2024.6.24-1_all.deb -rw-r--r-- 1 jenkins jenkins 94560 Nov 21 01:28 python3-custodian_2024.6.24-1_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2: total 0 Thu Nov 21 01:28:57 UTC 2024 I: Deleting $TMPDIR on virt32b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 20 13:13:32 -12 2024 I: pbuilder-time-stamp: 1732151612 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [custodian_2024.6.24-1.dsc] I: copying [./custodian_2024.6.24.orig.tar.gz] I: copying [./custodian_2024.6.24-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Aug 5 23:32:47 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./custodian_2024.6.24-1.dsc: no acceptable signature found dpkg-source: info: extracting custodian in custodian-2024.6.24 dpkg-source: info: unpacking custodian_2024.6.24.orig.tar.gz dpkg-source: info: unpacking custodian_2024.6.24-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying doc_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21225/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='c103cef6577a4601b9ab623d7cb1b332' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21225' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_SUkF --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1 --logfile b1/build.log custodian_2024.6.24-1.dsc' SUDO_GID='112' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32b 6.1.0-27-armmp-lpae #1 SMP Debian 6.1.115-1 (2024-11-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21225/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-setuptools, python3-all, python3-psutil, python3-pymatgen, python3-pytest, python3-sphinx, python3-myst-parser dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pymatgen; however: Package python3-pymatgen is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsymspg2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-annotated-types{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-bson{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dnspython{a} python3-docutils{a} python3-email-validator{a} python3-fastjsonschema{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jinja2{a} python3-joblib{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-monty{a} python3-more-itertools{a} python3-mpmath{a} python3-myst-parser{a} python3-nbformat{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-palettable{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-plotly{a} python3-pluggy{a} python3-psutil{a} python3-pybtex{a} python3-pydantic{a} python3-pydantic-core{a} python3-pygments{a} python3-pymatgen{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-spglib{a} python3-sphinx{a} python3-sympy{a} python3-tabulate{a} python3-tenacity{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-uncertainties{a} python3-urllib3{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils linux-sysctl-defaults lynx psmisc python-monty-doc python3-ase python3-bottleneck python3-bs4 python3-bson-ext python3-cryptography python3-cssselect python3-gdal python3-h2 python3-html5lib python3-httpcore python3-httpx python3-json-pointer python3-numexpr python3-odf python3-olefile python3-openbabel python3-openpyxl python3-pydot python3-pygraphviz python3-rfc3987 python3-simplejson python3-tables python3-uritemplate python3-vtk9 python3-webcolors shared-mime-info wget xdg-user-dirs 0 packages upgraded, 217 newly installed, 0 to remove and 0 not upgraded. Need to get 134 MB of archives. After unpacking 630 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.7-3 [800 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.7-3 [1808 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 12 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1819 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-2 [1348 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-11 [83.6 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libtcl8.6 armhf 8.6.15+dfsg-2 [934 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1+b1 [318 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1+b1 [371 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b2 [23.0 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.10-2 [337 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b2 [25.0 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libxft2 armhf 2.3.6-1+b2 [46.5 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libxss1 armhf 1:1.2.3-1+b2 [16.4 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libtk8.6 armhf 8.6.15-1 [697 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7 [481 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf blt armhf 2.5.3+dfsg-7 [6024 B] Get: 64 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-8 [517 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 70 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 84 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 74.1.2-2 [213 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf python3-zipp all 3.21.0-1 [10.6 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 74.1.2-2 [736 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20241024 [109 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf xml-core all 0.19 [20.1 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf fonts-lyx all 2.4.2.1-1 [190 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3+b1 [111 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-8 [263 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.2-2 [1326 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 10.0.1-1 [418 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libjson-perl all 4.10000-1 [87.5 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3+b1 [1828 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1+b2 [25.6 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf liblcms2-2 armhf 2.16-2 [131 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libopenjp2-7 armhf 2.5.0-2+b4 [179 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf libqhull-r8.0 armhf 2020.2-6+b2 [220 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b2 [11.8 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1+b1 [111 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf libsymspg2 armhf 2.5.0-1+b1 [184 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1+b1 [266 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf libwebpdemux2 armhf 1.4.0-0.1+b1 [110 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libwebpmux3 armhf 1.4.0-0.1+b1 [120 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libxslt1.1 armhf 1.1.35-1.1+b1 [212 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libyaml-0-2 armhf 0.2.5-1+b2 [45.4 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.1-1 [45.8 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf python3-toml all 0.10.2-1 [16.2 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf python3-wheel all 0.45.0-1 [56.7 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf python3-build all 1.2.2-1 [36.0 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf python-babel-localedata all 2.16.0-1 [5696 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 131 http://deb.debian.org/debian trixie/main armhf python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 132 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.12.6-1 [1040 B] Get: 133 http://deb.debian.org/debian trixie/main armhf python3-annotated-types all 0.7.0-1 [18.8 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf python3-appdirs all 1.4.4-4 [12.5 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf python3-attr all 23.2.0-2 [65.5 kB] Get: 136 http://deb.debian.org/debian trixie/main armhf python3-babel all 2.16.0-1 [114 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf python3-brotli armhf 1.1.0-2+b6 [302 kB] Get: 138 http://deb.debian.org/debian trixie/main armhf python3-bson all 4.10.1-2 [87.0 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 140 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf python3-charset-normalizer armhf 3.4.0-1+b1 [126 kB] Get: 142 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.26.4+ds-12 [3676 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf python3-contourpy armhf 1.3.0-2+b1 [217 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf python3-cycler all 0.12.1-1 [9496 B] Get: 145 http://deb.debian.org/debian trixie/main armhf python3-dateutil all 2.9.0-3 [79.3 kB] Get: 146 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf python3-dnspython all 2.6.1-1 [161 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf python3-roman all 4.2-1 [10.4 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf python3-idna all 3.8-2 [41.6 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf python3-email-validator all 2.2.0-1 [31.6 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 154 http://deb.debian.org/debian trixie/main armhf python3-tz all 2024.1-2 [30.9 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf python3-six all 1.16.0-7 [16.4 kB] Get: 156 http://deb.debian.org/debian trixie/main armhf python3-fs all 2.4.16-4 [95.4 kB] Get: 157 http://deb.debian.org/debian trixie/main armhf python3-lxml armhf 5.3.0-1+b1 [1468 kB] Get: 158 http://deb.debian.org/debian trixie/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b5 [24.0 kB] Get: 159 http://deb.debian.org/debian trixie/main armhf python3-scipy armhf 1.13.1-6 [17.6 MB] Get: 160 http://deb.debian.org/debian trixie/main armhf python3-mpmath all 1.3.0-1 [419 kB] Get: 161 http://deb.debian.org/debian trixie/main armhf python3-sympy all 1.13.3-1 [4147 kB] Get: 162 http://deb.debian.org/debian trixie/main armhf python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 163 http://deb.debian.org/debian trixie/main armhf unicode-data all 15.1.0-1 [8547 kB] Get: 164 http://deb.debian.org/debian trixie/main armhf python3-fonttools armhf 4.54.1-4+b1 [1527 kB] Get: 165 http://deb.debian.org/debian trixie/main armhf python3-imagesize all 1.4.1-1 [6688 B] Get: 166 http://deb.debian.org/debian trixie/main armhf python3-iniconfig all 1.1.1-2 [6396 B] Get: 167 http://deb.debian.org/debian trixie/main armhf python3-markupsafe armhf 2.1.5-1+b2 [13.4 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf python3-jinja2 all 3.1.3-1 [119 kB] Get: 169 http://deb.debian.org/debian trixie/main armhf python3-joblib all 1.3.2-5 [216 kB] Get: 170 http://deb.debian.org/debian trixie/main armhf python3-rpds-py armhf 0.21.0-2 [255 kB] Get: 171 http://deb.debian.org/debian trixie/main armhf python3-referencing all 0.35.1-1 [23.5 kB] Get: 172 http://deb.debian.org/debian trixie/main armhf python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 173 http://deb.debian.org/debian trixie/main armhf python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 174 http://deb.debian.org/debian trixie/main armhf python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 175 http://deb.debian.org/debian trixie/main armhf python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 176 http://deb.debian.org/debian trixie/main armhf python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 177 http://deb.debian.org/debian trixie/main armhf python3-kiwisolver armhf 1.4.7-2+b1 [64.9 kB] Get: 178 http://deb.debian.org/debian trixie/main armhf python3-latexcodec all 3.0.0-1 [17.5 kB] Get: 179 http://deb.debian.org/debian trixie/main armhf python3-mdurl all 0.1.2-1 [9444 B] Get: 180 http://deb.debian.org/debian trixie/main armhf python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 181 http://deb.debian.org/debian trixie/main armhf python3-pil armhf 10.4.0-1+b1 [478 kB] Get: 182 http://deb.debian.org/debian trixie/main armhf python3.12-tk armhf 3.12.7-3 [109 kB] Get: 183 http://deb.debian.org/debian trixie/main armhf python3.13-tk armhf 3.13.0-2 [99.7 kB] Get: 184 http://deb.debian.org/debian trixie/main armhf python3-tk armhf 3.12.7-1 [9444 B] Get: 185 http://deb.debian.org/debian trixie/main armhf python3-pil.imagetk armhf 10.4.0-1+b1 [79.3 kB] Get: 186 http://deb.debian.org/debian trixie/main armhf python3-pyparsing all 3.1.2-1 [146 kB] Get: 187 http://deb.debian.org/debian trixie/main armhf python3-matplotlib armhf 3.8.3-3+b1 [5579 kB] Get: 188 http://deb.debian.org/debian trixie/main armhf python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 189 http://deb.debian.org/debian trixie/main armhf python3-pandas-lib armhf 2.2.3+dfsg-5+b1 [6440 kB] Get: 190 http://deb.debian.org/debian trixie/main armhf python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 191 http://deb.debian.org/debian trixie/main armhf python3-pydantic-core armhf 2.23.4-2+b2 [1399 kB] Get: 192 http://deb.debian.org/debian trixie/main armhf python3-pydantic armhf 2.9.2-2 [343 kB] Get: 193 http://deb.debian.org/debian trixie/main armhf python3-tqdm all 4.67.0-1 [90.2 kB] Get: 194 http://deb.debian.org/debian trixie/main armhf python3-monty all 2024.7.29-1 [43.1 kB] Get: 195 http://deb.debian.org/debian trixie/main armhf sphinx-common all 7.4.7-4 [731 kB] Get: 196 http://deb.debian.org/debian trixie/main armhf python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 197 http://deb.debian.org/debian trixie/main armhf python3-urllib3 all 2.0.7-2 [111 kB] Get: 198 http://deb.debian.org/debian trixie/main armhf python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 199 http://deb.debian.org/debian trixie/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 200 http://deb.debian.org/debian trixie/main armhf python3-sphinx all 7.4.7-4 [588 kB] Get: 201 http://deb.debian.org/debian trixie/main armhf python3-yaml armhf 6.0.2-1+b1 [158 kB] Get: 202 http://deb.debian.org/debian trixie/main armhf python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 203 http://deb.debian.org/debian trixie/main armhf python3-nbformat all 5.9.1-1 [45.1 kB] Get: 204 http://deb.debian.org/debian trixie/main armhf python3-networkx all 3.2.1-4 [14.2 MB] Get: 205 http://deb.debian.org/debian trixie/main armhf python3-palettable all 3.3.3-1 [69.7 kB] Get: 206 http://deb.debian.org/debian trixie/main armhf python3-tenacity all 8.4.2+really8.4.1-1 [46.0 kB] Get: 207 http://deb.debian.org/debian trixie/main armhf python3-plotly all 5.20.0+dfsg-1 [2726 kB] Get: 208 http://deb.debian.org/debian trixie/main armhf python3-pluggy all 1.5.0-1 [26.9 kB] Get: 209 http://deb.debian.org/debian trixie/main armhf python3-psutil armhf 5.9.8-2 [225 kB] Get: 210 http://deb.debian.org/debian trixie/main armhf python3-pybtex all 0.24.0-4 [74.6 kB] Get: 211 http://deb.debian.org/debian trixie/main armhf python3-ruamel.yaml.clib armhf 0.2.8+ds-2+b1 [149 kB] Get: 212 http://deb.debian.org/debian trixie/main armhf python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get: 213 http://deb.debian.org/debian trixie/main armhf python3-spglib armhf 2.5.0-1+b1 [51.1 kB] Get: 214 http://deb.debian.org/debian trixie/main armhf python3-tabulate all 0.9.0-1 [45.9 kB] Get: 215 http://deb.debian.org/debian trixie/main armhf python3-uncertainties all 3.2.2-1 [54.7 kB] Get: 216 http://deb.debian.org/debian trixie/main armhf python3-pymatgen armhf 2024.10.29+dfsg1-3+b1 [2561 kB] Get: 217 http://deb.debian.org/debian trixie/main armhf python3-pytest all 8.3.3-1 [249 kB] Fetched 134 MB in 4s (30.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.7-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_armhf.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:armhf (3.12.7-3) ... Setting up libexpat1:armhf (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20010 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_armhf.deb ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_armhf.deb ... Unpacking python3.12 (3.12.7-3) ... 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Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.5-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:armhf (1.1.0-2+b6) ... Setting up libmagic1t64:armhf (1:5.45-3+b1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:armhf (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:armhf (2020.2-6+b2) ... Setting up libcom-err2:armhf (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:armhf (2.1-6.1+b2) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up python-babel-localedata (2.16.0-1) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Nov 21 01:14:58 UTC 2024. Universal Time is now: Thu Nov 21 01:14:58 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up libsymspg2:armhf (2.5.0-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:armhf (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libjpeg62-turbo:armhf (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libfribidi0:armhf (1.0.15-1) ... Setting up libimagequant0:armhf (2.18.0-1+b2) ... Setting up libproc2-0:armhf (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:armhf (1.6.44-2) ... Setting up libtcl8.6:armhf (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:armhf (1.21.3-3) ... Setting up libgfortran5:armhf (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:armhf (1.4.0-0.1+b1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:armhf (4.5.1+git230720-5) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libjson-perl (4.10000-1) ... Setting up libopenjp2-7:armhf (2.5.0-2+b4) ... Setting up libx11-6:armhf (2:1.8.10-2) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:armhf (1.21.3-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:armhf (1.4.0-0.1+b1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:armhf (1.4.0-0.1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:armhf (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:armhf (10.0.1-1) ... Setting up libxss1:armhf (1:1.2.3-1+b2) ... Setting up libfontconfig1:armhf (2.15.0-1.1+b1) ... Setting up liblbfgsb0:armhf (3.0+dfsg.4-1+b2) ... Setting up libxft2:armhf (2.3.6-1+b2) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:armhf (8.6.15-1) ... Setting up python3.12-tk (3.12.7-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3.13-tk (3.13.0-2) ... Setting up libraqm0:armhf (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libnsl2:armhf (1.3.0-3+b3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libpython3.12-stdlib:armhf (3.12.7-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b2) ... Setting up python3-wheel (0.45.0-1) ... Setting up python3-annotated-types (0.7.0-1) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-bson (4.10.1-2) ... Setting up python3-pil:armhf (10.4.0-1+b1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2+b1) ... Setting up python3-idna (3.8-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.21.0-2) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:armhf (5.3.0-1+b1) ... Setting up python3-dnspython (2.6.1-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-email-validator (2.2.0-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pydantic-core (2.23.4-2+b2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b5) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-tenacity (8.4.2+really8.4.1-1) ... Setting up python3-tqdm (4.67.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-ruamel.yaml.clib:armhf (0.2.8+ds-2+b1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-latexcodec (3.0.0-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:armhf (3.12.7-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:armhf (10.4.0-1+b1) ... Setting up python3-pydantic (2.9.2-2) ... Setting up python3-ruamel.yaml (0.18.6+ds-3) ... Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-joblib (1.3.2-5) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-networkx (3.2.1-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-palettable (3.3.3-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up python3-pybtex (0.24.0-4) ... Setting up python3-contourpy (1.3.0-2+b1) ... Setting up python3-spglib (2.5.0-1+b1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-uncertainties (3.2.2-1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-6) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5+b1) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-monty (2024.7.29-1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-plotly (5.20.0+dfsg-1) ... Setting up python3-fonttools (4.54.1-4+b1) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up python3-pymatgen (2024.10.29+dfsg1-3+b1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-myst-parser (4.0.0-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/custodian-2024.6.24/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../custodian_2024.6.24-1_source.changes dpkg-buildpackage: info: source package custodian dpkg-buildpackage: info: source version 2024.6.24-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from custodian-2024.6.24/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' dh_clean --exclude=tests/files make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' debian/rules binary dh binary --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/custodian copying custodian/custodian.py -> build/lib/custodian copying custodian/utils.py -> build/lib/custodian copying custodian/__init__.py -> build/lib/custodian creating build/lib/custodian/ansible copying custodian/ansible/actions.py -> build/lib/custodian/ansible copying custodian/ansible/interpreter.py -> build/lib/custodian/ansible copying custodian/ansible/__init__.py -> build/lib/custodian/ansible creating build/lib/custodian/qchem copying custodian/qchem/handlers.py -> build/lib/custodian/qchem copying custodian/qchem/jobs.py -> build/lib/custodian/qchem copying custodian/qchem/utils.py -> build/lib/custodian/qchem copying custodian/qchem/__init__.py -> build/lib/custodian/qchem creating build/lib/custodian/vasp copying custodian/vasp/handlers.py -> build/lib/custodian/vasp copying custodian/vasp/interpreter.py -> build/lib/custodian/vasp copying custodian/vasp/jobs.py -> build/lib/custodian/vasp copying custodian/vasp/utils.py -> build/lib/custodian/vasp copying custodian/vasp/__init__.py -> build/lib/custodian/vasp copying custodian/vasp/validators.py -> build/lib/custodian/vasp copying custodian/vasp/io.py -> build/lib/custodian/vasp creating build/lib/custodian/nwchem copying custodian/nwchem/handlers.py -> build/lib/custodian/nwchem copying custodian/nwchem/jobs.py -> build/lib/custodian/nwchem copying custodian/nwchem/__init__.py -> build/lib/custodian/nwchem creating build/lib/custodian/cp2k copying custodian/cp2k/handlers.py -> build/lib/custodian/cp2k copying custodian/cp2k/interpreter.py -> build/lib/custodian/cp2k copying custodian/cp2k/jobs.py -> build/lib/custodian/cp2k copying custodian/cp2k/utils.py -> build/lib/custodian/cp2k copying custodian/cp2k/__init__.py -> build/lib/custodian/cp2k copying custodian/cp2k/validators.py -> build/lib/custodian/cp2k creating build/lib/custodian/cli copying custodian/cli/cstdn.py -> build/lib/custodian/cli copying custodian/cli/run_nwchem.py -> build/lib/custodian/cli copying custodian/cli/run_vasp.py -> build/lib/custodian/cli copying custodian/cli/converge_kpoints.py -> build/lib/custodian/cli copying custodian/cli/__init__.py -> build/lib/custodian/cli copying custodian/cli/converge_geometry.py -> build/lib/custodian/cli creating build/lib/custodian/feff copying custodian/feff/handlers.py -> build/lib/custodian/feff copying custodian/feff/interpreter.py -> build/lib/custodian/feff copying custodian/feff/jobs.py -> build/lib/custodian/feff copying custodian/feff/__init__.py -> build/lib/custodian/feff creating build/lib/custodian/lobster copying custodian/lobster/handlers.py -> build/lib/custodian/lobster copying custodian/lobster/jobs.py -> build/lib/custodian/lobster copying custodian/lobster/__init__.py -> build/lib/custodian/lobster creating build/lib/custodian/gaussian copying custodian/gaussian/handlers.py -> build/lib/custodian/gaussian copying custodian/gaussian/jobs.py -> build/lib/custodian/gaussian copying custodian/gaussian/__init__.py -> build/lib/custodian/gaussian running egg_info creating custodian.egg-info writing custodian.egg-info/PKG-INFO writing dependency_links to custodian.egg-info/dependency_links.txt writing entry points to custodian.egg-info/entry_points.txt writing requirements to custodian.egg-info/requires.txt writing top-level names to custodian.egg-info/top_level.txt writing manifest file 'custodian.egg-info/SOURCES.txt' reading manifest file 'custodian.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'custodian.egg-info/SOURCES.txt' installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/custodian creating build/bdist.linux-armv7l/wheel/custodian/ansible copying build/lib/custodian/ansible/actions.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/custodian.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/qchem copying build/lib/custodian/qchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/utils.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/vasp copying build/lib/custodian/vasp/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/io.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp creating build/bdist.linux-armv7l/wheel/custodian/nwchem copying build/lib/custodian/nwchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/cp2k copying build/lib/custodian/cp2k/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k creating build/bdist.linux-armv7l/wheel/custodian/cli copying build/lib/custodian/cli/cstdn.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/run_nwchem.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/run_vasp.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/converge_kpoints.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/converge_geometry.py -> build/bdist.linux-armv7l/wheel/./custodian/cli creating build/bdist.linux-armv7l/wheel/custodian/feff copying build/lib/custodian/feff/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/feff creating build/bdist.linux-armv7l/wheel/custodian/lobster copying build/lib/custodian/lobster/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster copying build/lib/custodian/lobster/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster copying build/lib/custodian/lobster/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster creating build/bdist.linux-armv7l/wheel/custodian/gaussian copying build/lib/custodian/gaussian/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian copying build/lib/custodian/gaussian/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian copying build/lib/custodian/gaussian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian running install_egg_info Copying custodian.egg-info to build/bdist.linux-armv7l/wheel/./custodian-2024.6.24.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/custodian-2024.6.24.dist-info/WHEEL creating '/build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/.tmp-94x5lnt0/custodian-2024.6.24-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'custodian/__init__.py' adding 'custodian/custodian.py' adding 'custodian/utils.py' adding 'custodian/ansible/__init__.py' adding 'custodian/ansible/actions.py' adding 'custodian/ansible/interpreter.py' adding 'custodian/cli/__init__.py' adding 'custodian/cli/converge_geometry.py' adding 'custodian/cli/converge_kpoints.py' adding 'custodian/cli/cstdn.py' adding 'custodian/cli/run_nwchem.py' adding 'custodian/cli/run_vasp.py' adding 'custodian/cp2k/__init__.py' adding 'custodian/cp2k/handlers.py' adding 'custodian/cp2k/interpreter.py' adding 'custodian/cp2k/jobs.py' adding 'custodian/cp2k/utils.py' adding 'custodian/cp2k/validators.py' adding 'custodian/feff/__init__.py' adding 'custodian/feff/handlers.py' adding 'custodian/feff/interpreter.py' adding 'custodian/feff/jobs.py' adding 'custodian/gaussian/__init__.py' adding 'custodian/gaussian/handlers.py' adding 'custodian/gaussian/jobs.py' adding 'custodian/lobster/__init__.py' adding 'custodian/lobster/handlers.py' adding 'custodian/lobster/jobs.py' adding 'custodian/nwchem/__init__.py' adding 'custodian/nwchem/handlers.py' adding 'custodian/nwchem/jobs.py' adding 'custodian/qchem/__init__.py' adding 'custodian/qchem/handlers.py' adding 'custodian/qchem/jobs.py' adding 'custodian/qchem/utils.py' adding 'custodian/vasp/__init__.py' adding 'custodian/vasp/handlers.py' adding 'custodian/vasp/interpreter.py' adding 'custodian/vasp/io.py' adding 'custodian/vasp/jobs.py' adding 'custodian/vasp/utils.py' adding 'custodian/vasp/validators.py' adding 'custodian-2024.6.24.dist-info/LICENSE' adding 'custodian-2024.6.24.dist-info/METADATA' adding 'custodian-2024.6.24.dist-info/WHEEL' adding 'custodian-2024.6.24.dist-info/entry_points.txt' adding 'custodian-2024.6.24.dist-info/top_level.txt' adding 'custodian-2024.6.24.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Successfully built custodian-2024.6.24-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' PYTHONPATH=. python3 -m sphinx -N -bhtml \ docs/ .pybuild/docs/html # HTML generator Running Sphinx v7.4.7 loading translations [en]... done making output directory... done WARNING: html_static_path entry '_static' does not exist myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 45 source files that are out of date updating environment: [new config] 45 added, 0 changed, 0 removed reading sources... 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'custodian.ansible.actions.FileActions.file_modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:37: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_move' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:38: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.get_nested_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:40: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:41: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:42: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify_object' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:103: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:112: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:113: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:115: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:116: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.double_job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:117: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.gga_static_to_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:118: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:119: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.pre_screen_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:120: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:121: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:122: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:124: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_diag' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:125: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:126: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.can_use_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:127: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.cleanup_input' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:128: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.get_conv' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:129: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.restart' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:130: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.tail' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:132: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:133: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:134: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:135: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:136: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:137: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:138: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:139: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:140: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:141: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:144: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:152: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:153: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:154: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:155: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:157: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:158: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:160: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:161: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:162: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:163: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:166: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:174: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:175: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:176: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:177: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:178: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:179: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:181: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:182: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:183: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:184: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:187: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:192: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:193: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:194: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:196: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:197: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:198: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:199: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:202: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:215: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.perturb_coordinates' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:216: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.vector_list_diff' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:219: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:233: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:234: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:235: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:236: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:237: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:238: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:239: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:240: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:241: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:242: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:243: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:244: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:245: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:246: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:247: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:248: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:249: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:250: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:251: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:252: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:253: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:254: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:255: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:256: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:257: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:258: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:259: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:260: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:261: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:262: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:263: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:264: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:265: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:266: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:267: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:268: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:269: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:270: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.from_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:271: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:272: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:273: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:274: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:275: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:276: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:277: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:278: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:279: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:280: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:281: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:282: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:283: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:284: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:285: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:286: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:287: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:288: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:289: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:290: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:291: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:292: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:293: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:294: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:295: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:296: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:297: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:298: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:299: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:300: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:301: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:302: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:303: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:304: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:305: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:306: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:307: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:308: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:310: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:311: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:313: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:314: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:315: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:316: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:317: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:318: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.constrained_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:319: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.double_relaxation_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:320: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.full_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:321: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.metagga_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:322: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:323: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:324: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:325: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:326: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:327: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:328: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:329: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:331: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:332: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:333: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:334: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:335: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:336: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:337: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:338: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:339: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.check_broken_chgcar' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:341: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:342: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.LOG_FILE' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:343: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.from_spec' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:344: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:345: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.run_interrupted' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:346: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.CustodianError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:347: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:348: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:349: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:350: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:351: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:352: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.max_num_corrections' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:353: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.n_applied_corrections' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:354: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.raise_on_max' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:355: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:356: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:357: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.name' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:358: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:359: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:360: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:361: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:362: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:363: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsPerHandlerError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:364: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsPerJobError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:365: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.NonRecoverableError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:366: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ReturnCodeError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:367: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ValidationError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:368: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:369: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:371: WARNING: local id not found in doc 'custodian.utils': 'custodian.utils.backup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:372: WARNING: local id not found in doc 'custodian.utils': 'custodian.utils.get_execution_host_info' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:20: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:25: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:26: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.add_to_set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:27: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.inc' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:28: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pop' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:29: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pull' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:30: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pull_all' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:31: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.push' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:32: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.push_all' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:33: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.rename' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:34: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:35: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.unset' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:36: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:37: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_copy' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:38: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_create' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:39: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_delete' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:40: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:41: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_move' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:42: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.get_nested_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:44: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:45: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:46: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify_object' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.interpreter.md:39: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:12: WARNING: local id not found in doc 'custodian.cli.converge_geometry': 'custodian.cli.converge_geometry.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:13: WARNING: local id not found in doc 'custodian.cli.converge_geometry': 'custodian.cli.converge_geometry.get_runs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:15: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:16: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.get_runs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:17: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:19: WARNING: local id not found in doc 'custodian.cli.cstdn': 'custodian.cli.cstdn.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:20: WARNING: local id not found in doc 'custodian.cli.cstdn': 'custodian.cli.cstdn.print_example' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:21: WARNING: local id not found in doc 'custodian.cli.cstdn': 'custodian.cli.cstdn.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:23: WARNING: local id not found in doc 'custodian.cli.run_nwchem': 'custodian.cli.run_nwchem.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:24: WARNING: local id not found in doc 'custodian.cli.run_nwchem': 'custodian.cli.run_nwchem.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:26: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:27: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.get_jobs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:28: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.load_class' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:29: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:22: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:23: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:25: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:26: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.double_job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:27: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.gga_static_to_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:28: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:29: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.pre_screen_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:30: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:31: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:32: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:34: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_diag' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:35: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:36: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.can_use_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:37: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.cleanup_input' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:38: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.get_conv' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:39: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.restart' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:40: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.tail' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:42: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:43: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:44: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:45: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:46: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:47: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:48: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:49: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:50: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:51: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.interpreter.md:23: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.validators.md:41: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:21: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:22: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:23: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:24: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:26: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:27: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:29: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:30: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:31: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:32: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.handlers.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.interpreter.md:19: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:13: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:14: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.GRID_NAMES' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:15: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.MEM_UNITS' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:16: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.activate_better_guess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:17: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:18: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.conv_criteria' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:19: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.convert_mem' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:20: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:21: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.error_defs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:22: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.error_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:23: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.grid_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:24: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.recom_mem_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:25: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:26: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:27: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:28: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:30: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:31: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.generate_better_guess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:32: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:33: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:34: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:35: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:21: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:22: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:23: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:24: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:25: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:26: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:28: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:29: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:30: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:31: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:27: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:42: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:18: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:19: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:20: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:22: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:23: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:24: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:25: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.handlers.md:14: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:26: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.perturb_coordinates' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:27: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.vector_list_diff' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:27: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:28: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:29: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:30: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:31: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:32: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:33: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:34: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:35: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:36: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:37: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:38: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:39: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:40: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:41: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:42: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:43: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:44: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:45: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:46: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:47: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:48: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:49: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:50: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:51: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:52: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:53: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:54: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:55: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:56: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:57: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:58: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:59: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:60: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:61: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:62: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:63: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:64: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.from_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:65: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:66: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:67: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:68: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:69: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:70: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:71: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:72: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:73: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:74: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:75: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:76: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:77: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:78: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:79: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:80: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:81: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:82: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:83: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:84: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:85: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:86: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:87: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:88: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:89: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:90: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:91: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:92: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:93: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:94: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:95: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:96: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:97: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:98: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:99: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:100: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:101: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:102: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:104: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:105: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:107: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:108: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:109: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:110: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:111: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:112: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.constrained_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:113: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.double_relaxation_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:114: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.full_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:115: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.metagga_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:116: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:117: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:118: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:119: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:120: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:121: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:122: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:123: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:125: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:126: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:127: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:128: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:129: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:130: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:131: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:132: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:133: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.check_broken_chgcar' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:15: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:24: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:50: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:98: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:117: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:125: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:152: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:185: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:212: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:222: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:248: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:257: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:283: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:322: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:353: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:389: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:422: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:432: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:458: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:502: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:532: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:540: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:595: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.interpreter.md:20: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.jobs.md:38: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:25: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:41: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:54: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' generating indices... genindex done writing additional pages... search done copying images... [100%] assets/custodian_logo.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 538 warnings. The HTML pages are in .pybuild/docs/html. make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' rm -rf .pybuild/tests cp -r tests .pybuild # pymatgen is needed for tests but # spglib is only available on the default python version CUSTODIAN_TEST_DIR=/build/reproducible-path/custodian-2024.6.24/.pybuild/tests pybuild --test --test-pytest -p 3.12 \ --test-args='-k "not (test_fileman_cpscf_nseg_error or test_gdm_neg_precon_error or test_OptFF or test_first_step)"' I: pybuild base:311: cd /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/build; python3.12 -m pytest -k "not (test_fileman_cpscf_nseg_error or test_gdm_neg_precon_error or test_OptFF or test_first_step)" ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 178 items / 16 deselected / 1 skipped / 162 selected tests/ansible/test_interpreter.py .... [ 2%] tests/cp2k/test_handlers.py ........ [ 7%] tests/cp2k/test_jobs.py .. [ 8%] tests/feff/test_handlers.py . [ 9%] tests/feff/test_jobs.py ... [ 11%] tests/gaussian/test_handlers.py ...................... [ 24%] tests/gaussian/test_jobs.py .. [ 25%] tests/lobster/test_handlers.py .......... [ 32%] tests/lobster/test_jobs.py ... [ 33%] tests/nwchem/test_handlers.py . [ 34%] tests/qchem/test_jobs.py sss [ 36%] tests/test_custodian.py .......... [ 42%] tests/test_utils.py . [ 43%] tests/vasp/test_handlers.py ............................................ [ 70%] ........................... [ 87%] tests/vasp/test_io.py .. [ 88%] tests/vasp/test_jobs.py .......... [ 94%] tests/vasp/test_utils.py .. [ 95%] tests/vasp/test_validators.py ....... [100%] ========== 159 passed, 4 skipped, 16 deselected in 447.23s (0:07:27) =========== make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-custodian-doc. If the default is wrong, please use --doc-main-package debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' for f in `find debian/python-custodian-doc/usr/share/doc/python-custodian-doc/html -name *.html`; do \ sed "s|.google-analytics.com/ga.js|privacy/ga.js|g" -i $f; \ done make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' dh_sphinxdoc -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package python-custodian-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-custodian-doc' in '../python-custodian-doc_2024.6.24-1_all.deb'. dpkg-deb: building package 'python3-custodian' in '../python3-custodian_2024.6.24-1_all.deb'. dpkg-genbuildinfo --build=binary -O../custodian_2024.6.24-1_armhf.buildinfo dpkg-genchanges --build=binary -O../custodian_2024.6.24-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from custodian-2024.6.24/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21225 and its subdirectories I: Current time: Wed Nov 20 13:26:54 -12 2024 I: pbuilder-time-stamp: 1732152414 Thu Nov 21 01:28:59 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64b-armhf-rb.debian.net. Thu Nov 21 01:28:59 UTC 2024 I: Preparing to do remote build '2' on virt64b-armhf-rb.debian.net. Thu Nov 21 01:28:59 UTC 2024 - checking /var/lib/jenkins/offline_nodes if virt64b-armhf-rb.debian.net is marked as down. Thu Nov 21 01:28:59 UTC 2024 - checking via ssh if virt64b-armhf-rb.debian.net is up. removed '/tmp/read-only-fs-test-0TcGKb' ==================================================================================== Thu Nov 21 01:29:04 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on virt64b, called using "2 custodian trixie /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5 2024.6.24-1" as arguments. Thu Nov 21 01:29:04 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-wpLFGx2Y" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 01:29:04 UTC 2024 I: Downloading source for trixie/custodian=2024.6.24-1 Reading package lists... NOTICE: 'custodian' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/custodian.git Please use: git clone https://salsa.debian.org/debichem-team/custodian.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.6 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (dsc) [2322 B] Get:2 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (tar) [46.6 MB] Get:3 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (diff) [8232 B] Fetched 46.6 MB in 1s (34.7 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'custodian' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/custodian.git Please use: git clone https://salsa.debian.org/debichem-team/custodian.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 46.6 MB of source archives. Get:1 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (dsc) [2322 B] Get:2 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (tar) [46.6 MB] Get:3 http://deb.debian.org/debian trixie/main custodian 2024.6.24-1 (diff) [8232 B] Fetched 46.6 MB in 1s (34.7 MB/s) Download complete and in download only mode ============================================================================= Re-Building custodian in trixie on armhf on virt64b now. Date: Wed Nov 20 17:29:06 PST 2024 Date UTC: Thu Nov 21 01:29:06 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5 + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_M7JT + case ${ARCH} in + case $NUM_CPU in + case $ARCH in + locale=it_CH + language=it + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' custodian = debian-installer -o custodian = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' custodian = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_M7JT --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2 --logfile b2/build.log custodian_2024.6.24-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Nov 21 15:29:06 +14 2024 I: pbuilder-time-stamp: 1732152546 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [custodian_2024.6.24-1.dsc] I: copying [./custodian_2024.6.24.orig.tar.gz] I: copying [./custodian_2024.6.24-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Aug 5 23:32:47 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./custodian_2024.6.24-1.dsc: no acceptable signature found dpkg-source: info: extracting custodian in custodian-2024.6.24 dpkg-source: info: unpacking custodian_2024.6.24.orig.tar.gz dpkg-source: info: unpacking custodian_2024.6.24-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying doc_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D01_modify_environment starting debug: Running on virt64b. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 21 01:29 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=cd86f5d8d06349678055e73663baad57 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=9046 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_M7JT --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2 --logfile b2/build.log custodian_2024.6.24-1.dsc' SUDO_GID=113 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-27-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-setuptools, python3-all, python3-psutil, python3-pymatgen, python3-pytest, python3-sphinx, python3-myst-parser dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pymatgen; however: Package python3-pymatgen is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-myst-parser; however: Package python3-myst-parser is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libsymspg2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-annotated-types{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-bson{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dnspython{a} python3-docutils{a} python3-email-validator{a} python3-fastjsonschema{a} python3-fonttools{a} python3-fs{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jinja2{a} python3-joblib{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lxml{a} python3-lz4{a} python3-markdown-it{a} python3-markupsafe{a} python3-matplotlib{a} python3-mdit-py-plugins{a} python3-mdurl{a} python3-minimal{a} python3-monty{a} python3-more-itertools{a} python3-mpmath{a} python3-myst-parser{a} python3-nbformat{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-palettable{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-plotly{a} python3-pluggy{a} python3-psutil{a} python3-pybtex{a} python3-pydantic{a} python3-pydantic-core{a} python3-pygments{a} python3-pymatgen{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-spglib{a} python3-sphinx{a} python3-sympy{a} python3-tabulate{a} python3-tenacity{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-uncertainties{a} python3-urllib3{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils linux-sysctl-defaults lynx psmisc python-monty-doc python3-ase python3-bottleneck python3-bs4 python3-bson-ext python3-cryptography python3-cssselect python3-gdal python3-h2 python3-html5lib python3-httpcore python3-httpx python3-json-pointer python3-numexpr python3-odf python3-olefile python3-openbabel python3-openpyxl python3-pydot python3-pygraphviz python3-rfc3987 python3-simplejson python3-tables python3-uritemplate python3-vtk9 python3-webcolors shared-mime-info wget xdg-user-dirs 0 packages upgraded, 217 newly installed, 0 to remove and 0 not upgraded. Need to get 134 MB of archives. After unpacking 630 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.7-3 [800 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.7-3 [1808 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 12 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1819 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-2 [1348 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-11 [83.6 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf libtcl8.6 armhf 8.6.15+dfsg-2 [934 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libpng16-16t64 armhf 1.6.44-2 [263 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf fontconfig-config armhf 2.15.0-1.1+b1 [318 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libfontconfig1 armhf 2.15.0-1.1+b1 [371 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libxdmcp6 armhf 1:1.1.2-3+b2 [23.0 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libx11-data all 2:1.8.10-2 [337 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libxrender1 armhf 1:0.9.10-1.1+b2 [25.0 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf libxft2 armhf 2.3.6-1+b2 [46.5 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf x11-common all 1:7.7+23.1 [216 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libxss1 armhf 1:1.2.3-1+b2 [16.4 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libtk8.6 armhf 8.6.15-1 [697 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7 [481 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf blt armhf 2.5.3+dfsg-7 [6024 B] Get: 64 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-8 [517 kB] Get: 66 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 70 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 84 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 74.1.2-2 [213 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf python3-zipp all 3.21.0-1 [10.6 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf python3-setuptools all 74.1.2-2 [736 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf dh-python all 6.20241024 [109 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf xml-core all 0.19 [20.1 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf fonts-lyx all 2.4.2.1-1 [190 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf libblas3 armhf 3.12.0-3+b1 [111 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf libdeflate0 armhf 1.22-1 [36.3 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf libfribidi0 armhf 1.0.15-1 [70.0 kB] Get: 95 http://deb.debian.org/debian trixie/main armhf libgfortran5 armhf 14.2.0-8 [263 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf libglib2.0-0t64 armhf 2.82.2-2 [1326 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf libharfbuzz0b armhf 10.0.1-1 [418 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf libimagequant0 armhf 2.18.0-1+b2 [30.5 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 106 http://deb.debian.org/debian trixie/main armhf libjson-perl all 4.10000-1 [87.5 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf liblapack3 armhf 3.12.0-3+b1 [1828 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1+b2 [25.6 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf liblcms2-2 armhf 2.16-2 [131 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf libopenjp2-7 armhf 2.5.0-2+b4 [179 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf libqhull-r8.0 armhf 2020.2-6+b2 [220 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf libraqm0 armhf 0.10.1-1+b2 [11.8 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf libsharpyuv0 armhf 1.4.0-0.1+b1 [111 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf libsymspg2 armhf 2.5.0-1+b1 [184 kB] Get: 116 http://deb.debian.org/debian trixie/main armhf libwebp7 armhf 1.4.0-0.1+b1 [266 kB] Get: 117 http://deb.debian.org/debian trixie/main armhf libtiff6 armhf 4.5.1+git230720-5 [302 kB] Get: 118 http://deb.debian.org/debian trixie/main armhf libwebpdemux2 armhf 1.4.0-0.1+b1 [110 kB] Get: 119 http://deb.debian.org/debian trixie/main armhf libwebpmux3 armhf 1.4.0-0.1+b1 [120 kB] Get: 120 http://deb.debian.org/debian trixie/main armhf libxslt1.1 armhf 1.1.35-1.1+b1 [212 kB] Get: 121 http://deb.debian.org/debian trixie/main armhf libyaml-0-2 armhf 0.2.5-1+b2 [45.4 kB] Get: 122 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.1-1 [45.8 kB] Get: 123 http://deb.debian.org/debian trixie/main armhf python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 124 http://deb.debian.org/debian trixie/main armhf python3-toml all 0.10.2-1 [16.2 kB] Get: 125 http://deb.debian.org/debian trixie/main armhf python3-wheel all 0.45.0-1 [56.7 kB] Get: 126 http://deb.debian.org/debian trixie/main armhf python3-build all 1.2.2-1 [36.0 kB] Get: 127 http://deb.debian.org/debian trixie/main armhf python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 128 http://deb.debian.org/debian trixie/main armhf pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 129 http://deb.debian.org/debian trixie/main armhf python-babel-localedata all 2.16.0-1 [5696 kB] Get: 130 http://deb.debian.org/debian trixie/main armhf python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 131 http://deb.debian.org/debian trixie/main armhf python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 132 http://deb.debian.org/debian trixie/main armhf python3-all armhf 3.12.6-1 [1040 B] Get: 133 http://deb.debian.org/debian trixie/main armhf python3-annotated-types all 0.7.0-1 [18.8 kB] Get: 134 http://deb.debian.org/debian trixie/main armhf python3-appdirs all 1.4.4-4 [12.5 kB] Get: 135 http://deb.debian.org/debian trixie/main armhf python3-attr all 23.2.0-2 [65.5 kB] Get: 136 http://deb.debian.org/debian trixie/main armhf python3-babel all 2.16.0-1 [114 kB] Get: 137 http://deb.debian.org/debian trixie/main armhf python3-brotli armhf 1.1.0-2+b6 [302 kB] Get: 138 http://deb.debian.org/debian trixie/main armhf python3-bson all 4.10.1-2 [87.0 kB] Get: 139 http://deb.debian.org/debian trixie/main armhf python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 140 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 141 http://deb.debian.org/debian trixie/main armhf python3-charset-normalizer armhf 3.4.0-1+b1 [126 kB] Get: 142 http://deb.debian.org/debian trixie/main armhf python3-numpy armhf 1:1.26.4+ds-12 [3676 kB] Get: 143 http://deb.debian.org/debian trixie/main armhf python3-contourpy armhf 1.3.0-2+b1 [217 kB] Get: 144 http://deb.debian.org/debian trixie/main armhf python3-cycler all 0.12.1-1 [9496 B] Get: 145 http://deb.debian.org/debian trixie/main armhf python3-dateutil all 2.9.0-3 [79.3 kB] Get: 146 http://deb.debian.org/debian trixie/main armhf python3-decorator all 5.1.1-5 [15.1 kB] Get: 147 http://deb.debian.org/debian trixie/main armhf python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 148 http://deb.debian.org/debian trixie/main armhf python3-dnspython all 2.6.1-1 [161 kB] Get: 149 http://deb.debian.org/debian trixie/main armhf python3-roman all 4.2-1 [10.4 kB] Get: 150 http://deb.debian.org/debian trixie/main armhf python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 151 http://deb.debian.org/debian trixie/main armhf python3-idna all 3.8-2 [41.6 kB] Get: 152 http://deb.debian.org/debian trixie/main armhf python3-email-validator all 2.2.0-1 [31.6 kB] Get: 153 http://deb.debian.org/debian trixie/main armhf python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 154 http://deb.debian.org/debian trixie/main armhf python3-tz all 2024.1-2 [30.9 kB] Get: 155 http://deb.debian.org/debian trixie/main armhf python3-six all 1.16.0-7 [16.4 kB] Get: 156 http://deb.debian.org/debian trixie/main armhf python3-fs all 2.4.16-4 [95.4 kB] Get: 157 http://deb.debian.org/debian trixie/main armhf python3-lxml armhf 5.3.0-1+b1 [1468 kB] Get: 158 http://deb.debian.org/debian trixie/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b5 [24.0 kB] Get: 159 http://deb.debian.org/debian trixie/main armhf python3-scipy armhf 1.13.1-6 [17.6 MB] Get: 160 http://deb.debian.org/debian trixie/main armhf python3-mpmath all 1.3.0-1 [419 kB] Get: 161 http://deb.debian.org/debian trixie/main armhf python3-sympy all 1.13.3-1 [4147 kB] Get: 162 http://deb.debian.org/debian trixie/main armhf python3-ufolib2 all 0.16.1+dfsg1-1 [32.9 kB] Get: 163 http://deb.debian.org/debian trixie/main armhf unicode-data all 15.1.0-1 [8547 kB] Get: 164 http://deb.debian.org/debian trixie/main armhf python3-fonttools armhf 4.54.1-4+b1 [1527 kB] Get: 165 http://deb.debian.org/debian trixie/main armhf python3-imagesize all 1.4.1-1 [6688 B] Get: 166 http://deb.debian.org/debian trixie/main armhf python3-iniconfig all 1.1.1-2 [6396 B] Get: 167 http://deb.debian.org/debian trixie/main armhf python3-markupsafe armhf 2.1.5-1+b2 [13.4 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf python3-jinja2 all 3.1.3-1 [119 kB] Get: 169 http://deb.debian.org/debian trixie/main armhf python3-joblib all 1.3.2-5 [216 kB] Get: 170 http://deb.debian.org/debian trixie/main armhf python3-rpds-py armhf 0.21.0-2 [255 kB] Get: 171 http://deb.debian.org/debian trixie/main armhf python3-referencing all 0.35.1-1 [23.5 kB] Get: 172 http://deb.debian.org/debian trixie/main armhf python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 173 http://deb.debian.org/debian trixie/main armhf python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 174 http://deb.debian.org/debian trixie/main armhf python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 175 http://deb.debian.org/debian trixie/main armhf python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 176 http://deb.debian.org/debian trixie/main armhf python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 177 http://deb.debian.org/debian trixie/main armhf python3-kiwisolver armhf 1.4.7-2+b1 [64.9 kB] Get: 178 http://deb.debian.org/debian trixie/main armhf python3-latexcodec all 3.0.0-1 [17.5 kB] Get: 179 http://deb.debian.org/debian trixie/main armhf python3-mdurl all 0.1.2-1 [9444 B] Get: 180 http://deb.debian.org/debian trixie/main armhf python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 181 http://deb.debian.org/debian trixie/main armhf python3-pil armhf 10.4.0-1+b1 [478 kB] Get: 182 http://deb.debian.org/debian trixie/main armhf python3.12-tk armhf 3.12.7-3 [109 kB] Get: 183 http://deb.debian.org/debian trixie/main armhf python3.13-tk armhf 3.13.0-2 [99.7 kB] Get: 184 http://deb.debian.org/debian trixie/main armhf python3-tk armhf 3.12.7-1 [9444 B] Get: 185 http://deb.debian.org/debian trixie/main armhf python3-pil.imagetk armhf 10.4.0-1+b1 [79.3 kB] Get: 186 http://deb.debian.org/debian trixie/main armhf python3-pyparsing all 3.1.2-1 [146 kB] Get: 187 http://deb.debian.org/debian trixie/main armhf python3-matplotlib armhf 3.8.3-3+b1 [5579 kB] Get: 188 http://deb.debian.org/debian trixie/main armhf python3-mdit-py-plugins all 0.4.2-1 [32.4 kB] Get: 189 http://deb.debian.org/debian trixie/main armhf python3-pandas-lib armhf 2.2.3+dfsg-5+b1 [6440 kB] Get: 190 http://deb.debian.org/debian trixie/main armhf python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 191 http://deb.debian.org/debian trixie/main armhf python3-pydantic-core armhf 2.23.4-2+b2 [1399 kB] Get: 192 http://deb.debian.org/debian trixie/main armhf python3-pydantic armhf 2.9.2-2 [343 kB] Get: 193 http://deb.debian.org/debian trixie/main armhf python3-tqdm all 4.67.0-1 [90.2 kB] Get: 194 http://deb.debian.org/debian trixie/main armhf python3-monty all 2024.7.29-1 [43.1 kB] Get: 195 http://deb.debian.org/debian trixie/main armhf sphinx-common all 7.4.7-4 [731 kB] Get: 196 http://deb.debian.org/debian trixie/main armhf python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 197 http://deb.debian.org/debian trixie/main armhf python3-urllib3 all 2.0.7-2 [111 kB] Get: 198 http://deb.debian.org/debian trixie/main armhf python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 199 http://deb.debian.org/debian trixie/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 200 http://deb.debian.org/debian trixie/main armhf python3-sphinx all 7.4.7-4 [588 kB] Get: 201 http://deb.debian.org/debian trixie/main armhf python3-yaml armhf 6.0.2-1+b1 [158 kB] Get: 202 http://deb.debian.org/debian trixie/main armhf python3-myst-parser all 4.0.0-1 [78.7 kB] Get: 203 http://deb.debian.org/debian trixie/main armhf python3-nbformat all 5.9.1-1 [45.1 kB] Get: 204 http://deb.debian.org/debian trixie/main armhf python3-networkx all 3.2.1-4 [14.2 MB] Get: 205 http://deb.debian.org/debian trixie/main armhf python3-palettable all 3.3.3-1 [69.7 kB] Get: 206 http://deb.debian.org/debian trixie/main armhf python3-tenacity all 8.4.2+really8.4.1-1 [46.0 kB] Get: 207 http://deb.debian.org/debian trixie/main armhf python3-plotly all 5.20.0+dfsg-1 [2726 kB] Get: 208 http://deb.debian.org/debian trixie/main armhf python3-pluggy all 1.5.0-1 [26.9 kB] Get: 209 http://deb.debian.org/debian trixie/main armhf python3-psutil armhf 5.9.8-2 [225 kB] Get: 210 http://deb.debian.org/debian trixie/main armhf python3-pybtex all 0.24.0-4 [74.6 kB] Get: 211 http://deb.debian.org/debian trixie/main armhf python3-ruamel.yaml.clib armhf 0.2.8+ds-2+b1 [149 kB] Get: 212 http://deb.debian.org/debian trixie/main armhf python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get: 213 http://deb.debian.org/debian trixie/main armhf python3-spglib armhf 2.5.0-1+b1 [51.1 kB] Get: 214 http://deb.debian.org/debian trixie/main armhf python3-tabulate all 0.9.0-1 [45.9 kB] Get: 215 http://deb.debian.org/debian trixie/main armhf python3-uncertainties all 3.2.2-1 [54.7 kB] Get: 216 http://deb.debian.org/debian trixie/main armhf python3-pymatgen armhf 2024.10.29+dfsg1-3+b1 [2561 kB] Get: 217 http://deb.debian.org/debian trixie/main armhf python3-pytest all 8.3.3-1 [249 kB] Fetched 134 MB in 3s (43.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.7-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_armhf.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:armhf (3.12.7-3) ... Setting up libexpat1:armhf (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20010 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_armhf.deb ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_armhf.deb ... Unpacking python3.12 (3.12.7-3) ... 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Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.5-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:armhf (1.1.0-2+b6) ... Setting up libmagic1t64:armhf (1:5.45-3+b1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:armhf (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:armhf (2020.2-6+b2) ... Setting up libcom-err2:armhf (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:armhf (2.1-6.1+b2) ... Setting up libelf1t64:armhf (0.192-4) ... Setting up python-babel-localedata (2.16.0-1) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Nov 21 01:30:34 UTC 2024. Universal Time is now: Thu Nov 21 01:30:34 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up libsymspg2:armhf (2.5.0-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:armhf (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libjpeg62-turbo:armhf (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libfribidi0:armhf (1.0.15-1) ... Setting up libimagequant0:armhf (2.18.0-1+b2) ... Setting up libproc2-0:armhf (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:armhf (1.6.44-2) ... Setting up libtcl8.6:armhf (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:armhf (1.21.3-3) ... Setting up libgfortran5:armhf (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:armhf (1.4.0-0.1+b1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:armhf (4.5.1+git230720-5) ... Setting up libuchardet0:armhf (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libjson-perl (4.10000-1) ... Setting up libopenjp2-7:armhf (2.5.0-2+b4) ... Setting up libx11-6:armhf (2:1.8.10-2) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:armhf (1.21.3-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:armhf (1.4.0-0.1+b1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:armhf (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:armhf (1.4.0-0.1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:armhf (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:armhf (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:armhf (10.0.1-1) ... Setting up libxss1:armhf (1:1.2.3-1+b2) ... Setting up libfontconfig1:armhf (2.15.0-1.1+b1) ... Setting up liblbfgsb0:armhf (3.0+dfsg.4-1+b2) ... Setting up libxft2:armhf (2.3.6-1+b2) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:armhf (8.6.15-1) ... Setting up python3.12-tk (3.12.7-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3.13-tk (3.13.0-2) ... Setting up libraqm0:armhf (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libnsl2:armhf (1.3.0-3+b3) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libpython3.12-stdlib:armhf (3.12.7-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b2) ... Setting up python3-wheel (0.45.0-1) ... Setting up python3-annotated-types (0.7.0-1) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-bson (4.10.1-2) ... Setting up python3-pil:armhf (10.4.0-1+b1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2+b1) ... Setting up python3-idna (3.8-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-rpds-py (0.21.0-2) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:armhf (5.3.0-1+b1) ... Setting up python3-dnspython (2.6.1-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-email-validator (2.2.0-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pydantic-core (2.23.4-2+b2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b5) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-tenacity (8.4.2+really8.4.1-1) ... Setting up python3-tqdm (4.67.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-ruamel.yaml.clib:armhf (0.2.8+ds-2+b1) ... Setting up python3-mdit-py-plugins (0.4.2-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-latexcodec (3.0.0-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:armhf (3.12.7-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:armhf (10.4.0-1+b1) ... Setting up python3-pydantic (2.9.2-2) ... Setting up python3-ruamel.yaml (0.18.6+ds-3) ... Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-joblib (1.3.2-5) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-networkx (3.2.1-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-palettable (3.3.3-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up python3-pybtex (0.24.0-4) ... Setting up python3-contourpy (1.3.0-2+b1) ... Setting up python3-spglib (2.5.0-1+b1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-uncertainties (3.2.2-1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-6) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:armhf (2.2.3+dfsg-5+b1) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-monty (2024.7.29-1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-plotly (5.20.0+dfsg-1) ... Setting up python3-fonttools (4.54.1-4+b1) ... Setting up python3-ufolib2 (0.16.1+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up python3-pymatgen (2024.10.29+dfsg1-3+b1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-myst-parser (4.0.0-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/9046/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/9046/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/custodian-2024.6.24/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../custodian_2024.6.24-1_source.changes dpkg-buildpackage: info: source package custodian dpkg-buildpackage: info: source version 2024.6.24-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from custodian-2024.6.24/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' dh_clean --exclude=tests/files make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' debian/rules binary dh binary --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/custodian copying custodian/utils.py -> build/lib/custodian copying custodian/custodian.py -> build/lib/custodian copying custodian/__init__.py -> build/lib/custodian creating build/lib/custodian/lobster copying custodian/lobster/handlers.py -> build/lib/custodian/lobster copying custodian/lobster/__init__.py -> build/lib/custodian/lobster copying custodian/lobster/jobs.py -> build/lib/custodian/lobster creating build/lib/custodian/feff copying custodian/feff/handlers.py -> build/lib/custodian/feff copying custodian/feff/interpreter.py -> build/lib/custodian/feff copying custodian/feff/__init__.py -> build/lib/custodian/feff copying custodian/feff/jobs.py -> build/lib/custodian/feff creating build/lib/custodian/gaussian copying custodian/gaussian/handlers.py -> build/lib/custodian/gaussian copying custodian/gaussian/__init__.py -> build/lib/custodian/gaussian copying custodian/gaussian/jobs.py -> build/lib/custodian/gaussian creating build/lib/custodian/ansible copying custodian/ansible/actions.py -> build/lib/custodian/ansible copying custodian/ansible/interpreter.py -> build/lib/custodian/ansible copying custodian/ansible/__init__.py -> build/lib/custodian/ansible creating build/lib/custodian/vasp copying custodian/vasp/handlers.py -> build/lib/custodian/vasp copying custodian/vasp/validators.py -> build/lib/custodian/vasp copying custodian/vasp/utils.py -> build/lib/custodian/vasp copying custodian/vasp/interpreter.py -> build/lib/custodian/vasp copying custodian/vasp/io.py -> build/lib/custodian/vasp copying custodian/vasp/__init__.py -> build/lib/custodian/vasp copying custodian/vasp/jobs.py -> build/lib/custodian/vasp creating build/lib/custodian/cli copying custodian/cli/run_vasp.py -> build/lib/custodian/cli copying custodian/cli/converge_kpoints.py -> build/lib/custodian/cli copying custodian/cli/cstdn.py -> build/lib/custodian/cli copying custodian/cli/run_nwchem.py -> build/lib/custodian/cli copying custodian/cli/__init__.py -> build/lib/custodian/cli copying custodian/cli/converge_geometry.py -> build/lib/custodian/cli creating build/lib/custodian/qchem copying custodian/qchem/handlers.py -> build/lib/custodian/qchem copying custodian/qchem/utils.py -> build/lib/custodian/qchem copying custodian/qchem/__init__.py -> build/lib/custodian/qchem copying custodian/qchem/jobs.py -> build/lib/custodian/qchem creating build/lib/custodian/nwchem copying custodian/nwchem/handlers.py -> build/lib/custodian/nwchem copying custodian/nwchem/__init__.py -> build/lib/custodian/nwchem copying custodian/nwchem/jobs.py -> build/lib/custodian/nwchem creating build/lib/custodian/cp2k copying custodian/cp2k/handlers.py -> build/lib/custodian/cp2k copying custodian/cp2k/validators.py -> build/lib/custodian/cp2k copying custodian/cp2k/utils.py -> build/lib/custodian/cp2k copying custodian/cp2k/interpreter.py -> build/lib/custodian/cp2k copying custodian/cp2k/__init__.py -> build/lib/custodian/cp2k copying custodian/cp2k/jobs.py -> build/lib/custodian/cp2k running egg_info creating custodian.egg-info writing custodian.egg-info/PKG-INFO writing dependency_links to custodian.egg-info/dependency_links.txt writing entry points to custodian.egg-info/entry_points.txt writing requirements to custodian.egg-info/requires.txt writing top-level names to custodian.egg-info/top_level.txt writing manifest file 'custodian.egg-info/SOURCES.txt' reading manifest file 'custodian.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'custodian.egg-info/SOURCES.txt' installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/custodian creating build/bdist.linux-armv7l/wheel/custodian/lobster copying build/lib/custodian/lobster/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster copying build/lib/custodian/lobster/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster copying build/lib/custodian/lobster/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster creating build/bdist.linux-armv7l/wheel/custodian/feff copying build/lib/custodian/feff/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/feff/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/feff copying build/lib/custodian/utils.py -> build/bdist.linux-armv7l/wheel/./custodian copying build/lib/custodian/custodian.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/gaussian copying build/lib/custodian/gaussian/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian copying build/lib/custodian/gaussian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian copying build/lib/custodian/gaussian/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian creating build/bdist.linux-armv7l/wheel/custodian/ansible copying build/lib/custodian/ansible/actions.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible creating build/bdist.linux-armv7l/wheel/custodian/vasp copying build/lib/custodian/vasp/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/io.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp creating build/bdist.linux-armv7l/wheel/custodian/cli copying build/lib/custodian/cli/run_vasp.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/converge_kpoints.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/cstdn.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/run_nwchem.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/cli/converge_geometry.py -> build/bdist.linux-armv7l/wheel/./custodian/cli copying build/lib/custodian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/qchem copying build/lib/custodian/qchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem copying build/lib/custodian/qchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem creating build/bdist.linux-armv7l/wheel/custodian/nwchem copying build/lib/custodian/nwchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem creating build/bdist.linux-armv7l/wheel/custodian/cp2k copying build/lib/custodian/cp2k/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k running install_egg_info Copying custodian.egg-info to build/bdist.linux-armv7l/wheel/./custodian-2024.6.24.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/custodian-2024.6.24.dist-info/WHEEL creating '/build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/.tmp-q4iufw2e/custodian-2024.6.24-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'custodian/__init__.py' adding 'custodian/custodian.py' adding 'custodian/utils.py' adding 'custodian/ansible/__init__.py' adding 'custodian/ansible/actions.py' adding 'custodian/ansible/interpreter.py' adding 'custodian/cli/__init__.py' adding 'custodian/cli/converge_geometry.py' adding 'custodian/cli/converge_kpoints.py' adding 'custodian/cli/cstdn.py' adding 'custodian/cli/run_nwchem.py' adding 'custodian/cli/run_vasp.py' adding 'custodian/cp2k/__init__.py' adding 'custodian/cp2k/handlers.py' adding 'custodian/cp2k/interpreter.py' adding 'custodian/cp2k/jobs.py' adding 'custodian/cp2k/utils.py' adding 'custodian/cp2k/validators.py' adding 'custodian/feff/__init__.py' adding 'custodian/feff/handlers.py' adding 'custodian/feff/interpreter.py' adding 'custodian/feff/jobs.py' adding 'custodian/gaussian/__init__.py' adding 'custodian/gaussian/handlers.py' adding 'custodian/gaussian/jobs.py' adding 'custodian/lobster/__init__.py' adding 'custodian/lobster/handlers.py' adding 'custodian/lobster/jobs.py' adding 'custodian/nwchem/__init__.py' adding 'custodian/nwchem/handlers.py' adding 'custodian/nwchem/jobs.py' adding 'custodian/qchem/__init__.py' adding 'custodian/qchem/handlers.py' adding 'custodian/qchem/jobs.py' adding 'custodian/qchem/utils.py' adding 'custodian/vasp/__init__.py' adding 'custodian/vasp/handlers.py' adding 'custodian/vasp/interpreter.py' adding 'custodian/vasp/io.py' adding 'custodian/vasp/jobs.py' adding 'custodian/vasp/utils.py' adding 'custodian/vasp/validators.py' adding 'custodian-2024.6.24.dist-info/LICENSE' adding 'custodian-2024.6.24.dist-info/METADATA' adding 'custodian-2024.6.24.dist-info/WHEEL' adding 'custodian-2024.6.24.dist-info/entry_points.txt' adding 'custodian-2024.6.24.dist-info/top_level.txt' adding 'custodian-2024.6.24.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Successfully built custodian-2024.6.24-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' PYTHONPATH=. python3 -m sphinx -N -bhtml \ docs/ .pybuild/docs/html # HTML generator Running Sphinx v7.4.7 loading translations [en]... done making output directory... done WARNING: html_static_path entry '_static' does not exist myst v4.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=3, heading_slug_func=None, html_meta={}, footnote_sort=True, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 45 source files that are out of date updating environment: [new config] 45 added, 0 changed, 0 removed reading sources... 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'custodian.ansible.actions.FileActions.file_modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:37: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_move' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:38: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.get_nested_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:40: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:41: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:42: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify_object' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:103: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:112: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:113: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:115: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:116: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.double_job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:117: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.gga_static_to_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:118: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:119: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.pre_screen_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:120: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:121: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:122: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:124: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_diag' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:125: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:126: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.can_use_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:127: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.cleanup_input' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:128: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.get_conv' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:129: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.restart' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:130: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.tail' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:132: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:133: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:134: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:135: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:136: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:137: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:138: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:139: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:140: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:141: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:144: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:152: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:153: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:154: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:155: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:157: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:158: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:160: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:161: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:162: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:163: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:166: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:174: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:175: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:176: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:177: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:178: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:179: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:181: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:182: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:183: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:184: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:187: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:192: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:193: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:194: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:196: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:197: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:198: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:199: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:202: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:215: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.perturb_coordinates' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:216: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.vector_list_diff' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:219: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:233: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:234: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:235: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:236: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:237: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:238: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:239: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:240: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:241: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:242: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:243: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:244: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:245: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:246: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:247: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:248: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:249: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:250: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:251: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:252: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:253: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:254: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:255: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:256: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:257: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:258: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:259: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:260: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:261: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:262: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:263: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:264: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:265: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:266: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:267: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:268: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:269: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:270: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.from_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:271: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:272: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:273: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:274: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:275: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:276: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:277: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:278: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:279: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:280: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:281: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:282: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:283: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:284: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:285: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:286: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:287: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:288: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:289: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:290: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:291: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:292: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:293: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:294: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:295: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:296: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:297: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:298: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:299: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:300: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:301: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:302: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:303: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:304: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:305: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:306: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:307: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:308: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:310: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:311: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:313: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:314: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:315: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:316: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:317: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:318: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.constrained_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:319: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.double_relaxation_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:320: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.full_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:321: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.metagga_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:322: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:323: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:324: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:325: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:326: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:327: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:328: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:329: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:331: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:332: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:333: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:334: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:335: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:336: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:337: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:338: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:339: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.check_broken_chgcar' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:341: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:342: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.LOG_FILE' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:343: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.from_spec' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:344: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:345: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Custodian.run_interrupted' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:346: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.CustodianError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:347: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:348: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:349: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:350: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:351: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:352: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.max_num_corrections' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:353: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.n_applied_corrections' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:354: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.raise_on_max' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:355: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:356: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:357: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.name' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:358: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:359: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:360: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:361: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:362: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:363: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsPerHandlerError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:364: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.MaxCorrectionsPerJobError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:365: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.NonRecoverableError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:366: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ReturnCodeError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:367: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ValidationError' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:368: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:369: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:371: WARNING: local id not found in doc 'custodian.utils': 'custodian.utils.backup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.md:372: WARNING: local id not found in doc 'custodian.utils': 'custodian.utils.get_execution_host_info' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:20: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:25: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:26: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.add_to_set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:27: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.inc' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:28: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pop' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:29: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pull' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:30: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.pull_all' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:31: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.push' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:32: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.push_all' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:33: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.rename' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:34: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.set' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:35: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.DictActions.unset' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:36: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:37: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_copy' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:38: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_create' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:39: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_delete' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:40: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:41: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.FileActions.file_move' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:42: WARNING: local id not found in doc 'custodian.ansible.actions': 'custodian.ansible.actions.get_nested_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:44: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:45: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.md:46: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder.modify_object' /build/reproducible-path/custodian-2024.6.24/docs/custodian.ansible.interpreter.md:39: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:12: WARNING: local id not found in doc 'custodian.cli.converge_geometry': 'custodian.cli.converge_geometry.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:13: WARNING: local id not found in doc 'custodian.cli.converge_geometry': 'custodian.cli.converge_geometry.get_runs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:15: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:16: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.get_runs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:17: WARNING: local id not found in doc 'custodian.cli.converge_kpoints': 'custodian.cli.converge_kpoints.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:19: WARNING: local id not found in doc 'custodian.cli.cstdn': 'custodian.cli.cstdn.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:20: WARNING: local id not found in doc 'custodian.cli.cstdn': 'custodian.cli.cstdn.print_example' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:21: WARNING: local id not found in doc 'custodian.cli.cstdn': 'custodian.cli.cstdn.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:23: WARNING: local id not found in doc 'custodian.cli.run_nwchem': 'custodian.cli.run_nwchem.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:24: WARNING: local id not found in doc 'custodian.cli.run_nwchem': 'custodian.cli.run_nwchem.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:26: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.do_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:27: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.get_jobs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:28: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.load_class' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cli.md:29: WARNING: local id not found in doc 'custodian.cli.run_vasp': 'custodian.cli.run_vasp.main' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:22: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:23: WARNING: local id not found in doc 'custodian.cp2k.interpreter': 'custodian.cp2k.interpreter.Cp2kModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:25: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:26: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.double_job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:27: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.gga_static_to_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:28: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:29: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.pre_screen_hybrid' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:30: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:31: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:32: WARNING: local id not found in doc 'custodian.cp2k.jobs': 'custodian.cp2k.jobs.Cp2kJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:34: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_diag' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:35: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.activate_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:36: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.can_use_ot' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:37: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.cleanup_input' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:38: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.get_conv' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:39: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.restart' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:40: WARNING: local id not found in doc 'custodian.cp2k.utils': 'custodian.cp2k.utils.tail' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:42: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:43: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:44: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:45: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:46: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kOutputValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:47: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:48: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:49: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.exit' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:50: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.kill' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.md:51: WARNING: local id not found in doc 'custodian.cp2k.validators': 'custodian.cp2k.validators.Cp2kValidator.no_children' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.interpreter.md:23: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.cp2k.validators.md:41: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:21: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:22: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:23: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:24: WARNING: local id not found in doc 'custodian.feff.handlers': 'custodian.feff.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:26: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:27: WARNING: local id not found in doc 'custodian.feff.interpreter': 'custodian.feff.interpreter.FeffModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:29: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:30: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:31: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.md:32: WARNING: local id not found in doc 'custodian.feff.jobs': 'custodian.feff.jobs.FeffJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.handlers.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.interpreter.md:19: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.feff.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:13: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:14: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.GRID_NAMES' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:15: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.MEM_UNITS' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:16: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.activate_better_guess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:17: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:18: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.conv_criteria' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:19: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.convert_mem' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:20: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:21: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.error_defs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:22: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.error_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:23: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.grid_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:24: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.GaussianErrorHandler.recom_mem_patt' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:25: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:26: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:27: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:28: WARNING: local id not found in doc 'custodian.gaussian.handlers': 'custodian.gaussian.handlers.WallTimeErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:30: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:31: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.generate_better_guess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:32: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:33: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:34: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.gaussian.md:35: WARNING: local id not found in doc 'custodian.gaussian.jobs': 'custodian.gaussian.jobs.GaussianJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:21: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:22: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.ChargeSpillingValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:23: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:24: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.EnoughBandsValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:25: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:26: WARNING: local id not found in doc 'custodian.lobster.handlers': 'custodian.lobster.handlers.LobsterFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:28: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:29: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:30: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.md:31: WARNING: local id not found in doc 'custodian.lobster.jobs': 'custodian.lobster.jobs.LobsterJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:27: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.handlers.md:42: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.lobster.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:18: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:19: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:20: WARNING: local id not found in doc 'custodian.nwchem.handlers': 'custodian.nwchem.handlers.NwchemErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:22: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:23: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:24: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.md:25: WARNING: local id not found in doc 'custodian.nwchem.jobs': 'custodian.nwchem.jobs.NwchemJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.handlers.md:14: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.nwchem.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:26: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.perturb_coordinates' /build/reproducible-path/custodian-2024.6.24/docs/custodian.qchem.md:27: WARNING: local id not found in doc 'custodian.qchem.utils': 'custodian.qchem.utils.vector_list_diff' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:13: WARNING: 'myst' cross-reference target not found: '' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:27: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:28: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:29: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:30: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:31: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.AliasingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:32: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:33: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:34: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:35: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:36: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.CheckpointHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:37: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:38: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:39: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.DriftErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:40: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:41: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:42: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:43: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.FrozenJobErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:44: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:45: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:46: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:47: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.IncorrectSmearingHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:48: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:49: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:50: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:51: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LargeSigmaHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:52: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:53: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:54: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:55: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:56: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.LrfCommutatorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:57: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:58: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:59: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:60: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.MeshSymmetryErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:61: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:62: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:63: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:64: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.from_dict' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:65: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.NonConvergingErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:66: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:67: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:68: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:69: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PositiveEnergyErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:70: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:71: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:72: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:73: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.PotimErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:74: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:75: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:76: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:77: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.ScanMetalHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:78: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:79: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:80: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:81: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:82: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StdErrHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:83: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:84: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:85: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:86: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:87: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.StoppedRunHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:88: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:89: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:90: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:91: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.UnconvergedErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:92: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:93: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:94: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:95: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.error_msgs' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:96: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.VaspErrorHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:97: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:98: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:99: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.correct' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:100: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_monitor' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:101: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.is_terminating' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:102: WARNING: local id not found in doc 'custodian.vasp.handlers': 'custodian.vasp.handlers.WalltimeHandler.raises_runtime_error' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:104: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:105: WARNING: local id not found in doc 'custodian.vasp.interpreter': 'custodian.vasp.interpreter.VaspModder.apply_actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:107: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:108: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:109: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:110: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.GenerateVaspInputJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:111: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:112: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.constrained_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:113: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.double_relaxation_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:114: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.full_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:115: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.metagga_opt_run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:116: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:117: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:118: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:119: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob.terminate' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:120: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:121: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.postprocess' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:122: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.run' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:123: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspNEBJob.setup' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:125: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:126: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspAECCARValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:127: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:128: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspFilesValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:129: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:130: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VaspNpTMDValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:131: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:132: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.VasprunXMLValidator.check' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.md:133: WARNING: local id not found in doc 'custodian.vasp.validators': 'custodian.vasp.validators.check_broken_chgcar' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:15: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:24: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:50: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:98: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:117: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:125: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:152: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:185: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:212: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:222: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:248: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:257: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:283: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:322: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:353: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:389: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:422: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:432: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:458: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:502: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:532: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:540: WARNING: local id not found in doc 'custodian.vasp.jobs': 'custodian.vasp.jobs.VaspJob' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.handlers.md:595: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.ErrorHandler' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.interpreter.md:13: WARNING: local id not found in doc 'custodian.ansible.interpreter': 'custodian.ansible.interpreter.Modder' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.interpreter.md:20: WARNING: local id not found in doc 'custodian.ansible.actions': 'module-custodian.ansible.actions' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.jobs.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.jobs.md:38: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Job' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:13: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:25: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:41: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' /build/reproducible-path/custodian-2024.6.24/docs/custodian.vasp.validators.md:54: WARNING: local id not found in doc 'custodian.custodian': 'custodian.custodian.Validator' generating indices... genindex done writing additional pages... search done copying images... [100%] assets/custodian_logo.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 538 warnings. The HTML pages are in .pybuild/docs/html. make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' rm -rf .pybuild/tests cp -r tests .pybuild # pymatgen is needed for tests but # spglib is only available on the default python version CUSTODIAN_TEST_DIR=/build/reproducible-path/custodian-2024.6.24/.pybuild/tests pybuild --test --test-pytest -p 3.12 \ --test-args='-k "not (test_fileman_cpscf_nseg_error or test_gdm_neg_precon_error or test_OptFF or test_first_step)"' I: pybuild base:311: cd /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/build; python3.12 -m pytest -k "not (test_fileman_cpscf_nseg_error or test_gdm_neg_precon_error or test_OptFF or test_first_step)" ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 178 items / 16 deselected / 1 skipped / 162 selected tests/ansible/test_interpreter.py .... [ 2%] tests/cp2k/test_handlers.py ........ [ 7%] tests/cp2k/test_jobs.py .. [ 8%] tests/feff/test_handlers.py . [ 9%] tests/feff/test_jobs.py ... [ 11%] tests/gaussian/test_handlers.py ...................... [ 24%] tests/gaussian/test_jobs.py .. [ 25%] tests/lobster/test_handlers.py .......... [ 32%] tests/lobster/test_jobs.py ... [ 33%] tests/nwchem/test_handlers.py . [ 34%] tests/qchem/test_jobs.py sss [ 36%] tests/test_custodian.py .......... [ 42%] tests/test_utils.py . [ 43%] tests/vasp/test_handlers.py ............................................ [ 70%] ........................... [ 87%] tests/vasp/test_io.py .. [ 88%] tests/vasp/test_jobs.py .......... [ 94%] tests/vasp/test_utils.py .. [ 95%] tests/vasp/test_validators.py ....... [100%] ========== 159 passed, 4 skipped, 16 deselected in 296.55s (0:04:56) =========== make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-custodian-doc. If the default is wrong, please use --doc-main-package debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/custodian-2024.6.24' for f in `find debian/python-custodian-doc/usr/share/doc/python-custodian-doc/html -name *.html`; do \ sed "s|.google-analytics.com/ga.js|privacy/ga.js|g" -i $f; \ done make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' dh_sphinxdoc -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package python-custodian-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-custodian-doc' in '../python-custodian-doc_2024.6.24-1_all.deb'. dpkg-deb: building package 'python3-custodian' in '../python3-custodian_2024.6.24-1_all.deb'. dpkg-genbuildinfo --build=binary -O../custodian_2024.6.24-1_armhf.buildinfo dpkg-genchanges --build=binary -O../custodian_2024.6.24-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from custodian-2024.6.24/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/9046/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/9046/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/9046 and its subdirectories I: Current time: Thu Nov 21 15:39:08 +14 2024 I: pbuilder-time-stamp: 1732153148 + false + set +x Thu Nov 21 01:39:08 UTC 2024 I: Signing ./b2/custodian_2024.6.24-1_armhf.buildinfo as custodian_2024.6.24-1_armhf.buildinfo.asc Thu Nov 21 01:39:08 UTC 2024 I: Signed ./b2/custodian_2024.6.24-1_armhf.buildinfo as ./b2/custodian_2024.6.24-1_armhf.buildinfo.asc Thu Nov 21 01:39:08 UTC 2024 - build #2 for custodian/trixie/armhf on virt64b done. Starting cleanup. All cleanup done. Thu Nov 21 01:39:08 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-wpLFGx2Y, removing. /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5: total 220 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 01:28 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 01:40 b2 -rw-r--r-- 1 jenkins jenkins 2322 Aug 5 23:43 custodian_2024.6.24-1.dsc -rw------- 1 jenkins jenkins 204905 Nov 21 01:28 rbuildlog.aojmA8K /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1: total 46084 -rw-r--r-- 1 jenkins jenkins 201147 Nov 21 01:26 build.log -rw-r--r-- 1 jenkins jenkins 8232 Nov 21 01:26 custodian_2024.6.24-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2322 Nov 21 01:26 custodian_2024.6.24-1.dsc -rw-r--r-- 1 jenkins jenkins 11033 Nov 21 01:26 custodian_2024.6.24-1_armhf.buildinfo -rw-r--r-- 1 jenkins jenkins 11915 Nov 21 01:26 custodian_2024.6.24-1_armhf.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1720 Nov 21 01:26 custodian_2024.6.24-1_armhf.changes -rw-r--r-- 1 jenkins jenkins 1722 Nov 21 01:26 custodian_2024.6.24-1_source.changes -rw-r--r-- 1 jenkins jenkins 46582319 Nov 21 01:28 custodian_2024.6.24.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 184348 Nov 21 01:28 python-custodian-doc_2024.6.24-1_all.deb -rw-r--r-- 1 jenkins jenkins 94560 Nov 21 01:28 python3-custodian_2024.6.24-1_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2: total 46072 -rw-r--r-- 1 jenkins jenkins 203070 Nov 21 01:39 build.log -rw-r--r-- 1 jenkins jenkins 8232 Nov 21 01:39 custodian_2024.6.24-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2322 Nov 21 01:39 custodian_2024.6.24-1.dsc -rw-r--r-- 1 jenkins jenkins 11028 Nov 21 01:39 custodian_2024.6.24-1_armhf.buildinfo -rw-r--r-- 1 jenkins jenkins 11910 Nov 21 01:39 custodian_2024.6.24-1_armhf.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1720 Nov 21 01:39 custodian_2024.6.24-1_armhf.changes -rw-r--r-- 1 jenkins jenkins 1722 Nov 21 01:39 custodian_2024.6.24-1_source.changes -rw-r--r-- 1 jenkins jenkins 46582319 Nov 21 01:40 custodian_2024.6.24.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 184348 Nov 21 01:40 python-custodian-doc_2024.6.24-1_all.deb -rw-r--r-- 1 jenkins jenkins 94560 Nov 21 01:40 python3-custodian_2024.6.24-1_all.deb Thu Nov 21 01:40:48 UTC 2024 I: Deleting $TMPDIR on virt64b-armhf-rb.debian.net. Thu Nov 21 01:40:50 UTC 2024 I: custodian_2024.6.24-1_armhf.changes: Format: 1.8 Date: Tue, 06 Aug 2024 01:13:32 +0200 Source: custodian Binary: python-custodian-doc python3-custodian Architecture: all Version: 2024.6.24-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: python-custodian-doc - flexible just-in-time job management framework in Python (doc) python3-custodian - flexible just-in-time job management framework in Python Changes: custodian (2024.6.24-1) unstable; urgency=medium . * New upstream release. - deprecates debian patches env_test_dir.patch and test_skip.patch * debian/tests: copy tests complete with name to use as module. Run all tests. CUSTODIAN_TEST_DIR no longer needed. * Standards-Version: 4.7.0 Checksums-Sha1: e5cbbb5b23083841c65e2218740f8ff81bf578ef 11033 custodian_2024.6.24-1_armhf.buildinfo 714831129dffaebf810488c016734bd68bbb1f64 184348 python-custodian-doc_2024.6.24-1_all.deb da267c608bccfc834d17dc360356b52ffa1239fd 94560 python3-custodian_2024.6.24-1_all.deb Checksums-Sha256: 34e9ce615c3726dfaeb9ad76ec6b2e65e50c5aa84d69d124967e302b718d879d 11033 custodian_2024.6.24-1_armhf.buildinfo a84be7397c9e6a9a31e6aeecfc114b0f6f3088245248d471fe6d0ca08f7e2eda 184348 python-custodian-doc_2024.6.24-1_all.deb 7269b3899e3d3105a03a46c8d87097a930ec6e812d2b75ba966a7fe595f82a07 94560 python3-custodian_2024.6.24-1_all.deb Files: 43e2c305b843297c83343ef921935f0d 11033 python optional custodian_2024.6.24-1_armhf.buildinfo 69a5d8453dd5a7a998ed96f75dd06a4d 184348 doc optional python-custodian-doc_2024.6.24-1_all.deb 62770c6e551a0f2f4f5f9a1864026d82 94560 python optional python3-custodian_2024.6.24-1_all.deb Diff of the two buildlogs: -- --- b1/build.log 2024-11-21 01:26:59.720057312 +0000 +++ b2/build.log 2024-11-21 01:39:13.666934877 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Nov 20 13:13:32 -12 2024 -I: pbuilder-time-stamp: 1732151612 +I: Current time: Thu Nov 21 15:29:06 +14 2024 +I: pbuilder-time-stamp: 1732152546 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying doc_build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/21225/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D01_modify_environment starting +debug: Running on virt64b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 21 01:29 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='c103cef6577a4601b9ab623d7cb1b332' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='21225' - PS1='# ' - PS2='> ' + INVOCATION_ID=cd86f5d8d06349678055e73663baad57 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=9046 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_SUkF --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1 --logfile b1/build.log custodian_2024.6.24-1.dsc' - SUDO_GID='112' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/pbuilderrc_M7JT --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2 --logfile b2/build.log custodian_2024.6.24-1.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32b 6.1.0-27-armmp-lpae #1 SMP Debian 6.1.115-1 (2024-11-01) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/21225/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -343,7 +375,7 @@ Get: 215 http://deb.debian.org/debian trixie/main armhf python3-uncertainties all 3.2.2-1 [54.7 kB] Get: 216 http://deb.debian.org/debian trixie/main armhf python3-pymatgen armhf 2024.10.29+dfsg1-3+b1 [2561 kB] Get: 217 http://deb.debian.org/debian trixie/main armhf python3-pytest all 8.3.3-1 [249 kB] -Fetched 134 MB in 4s (30.8 MB/s) +Fetched 134 MB in 3s (43.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) @@ -1045,8 +1077,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Nov 21 01:14:58 UTC 2024. -Universal Time is now: Thu Nov 21 01:14:58 UTC 2024. +Local time is now: Thu Nov 21 01:30:34 UTC 2024. +Universal Time is now: Thu Nov 21 01:30:34 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -1255,7 +1287,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/custodian-2024.6.24/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../custodian_2024.6.24-1_source.changes +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/custodian-2024.6.24/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../custodian_2024.6.24-1_source.changes dpkg-buildpackage: info: source package custodian dpkg-buildpackage: info: source version 2024.6.24-1 dpkg-buildpackage: info: source distribution unstable @@ -1286,57 +1322,57 @@ creating build creating build/lib creating build/lib/custodian -copying custodian/custodian.py -> build/lib/custodian copying custodian/utils.py -> build/lib/custodian +copying custodian/custodian.py -> build/lib/custodian copying custodian/__init__.py -> build/lib/custodian +creating build/lib/custodian/lobster +copying custodian/lobster/handlers.py -> build/lib/custodian/lobster +copying custodian/lobster/__init__.py -> build/lib/custodian/lobster +copying custodian/lobster/jobs.py -> build/lib/custodian/lobster +creating build/lib/custodian/feff +copying custodian/feff/handlers.py -> build/lib/custodian/feff +copying custodian/feff/interpreter.py -> build/lib/custodian/feff +copying custodian/feff/__init__.py -> build/lib/custodian/feff +copying custodian/feff/jobs.py -> build/lib/custodian/feff +creating build/lib/custodian/gaussian +copying custodian/gaussian/handlers.py -> build/lib/custodian/gaussian +copying custodian/gaussian/__init__.py -> build/lib/custodian/gaussian +copying custodian/gaussian/jobs.py -> build/lib/custodian/gaussian creating build/lib/custodian/ansible copying custodian/ansible/actions.py -> build/lib/custodian/ansible copying custodian/ansible/interpreter.py -> build/lib/custodian/ansible copying custodian/ansible/__init__.py -> build/lib/custodian/ansible -creating build/lib/custodian/qchem -copying custodian/qchem/handlers.py -> build/lib/custodian/qchem -copying custodian/qchem/jobs.py -> build/lib/custodian/qchem -copying custodian/qchem/utils.py -> build/lib/custodian/qchem -copying custodian/qchem/__init__.py -> build/lib/custodian/qchem creating build/lib/custodian/vasp copying custodian/vasp/handlers.py -> build/lib/custodian/vasp -copying custodian/vasp/interpreter.py -> build/lib/custodian/vasp -copying custodian/vasp/jobs.py -> build/lib/custodian/vasp -copying custodian/vasp/utils.py -> build/lib/custodian/vasp -copying custodian/vasp/__init__.py -> build/lib/custodian/vasp copying custodian/vasp/validators.py -> build/lib/custodian/vasp +copying custodian/vasp/utils.py -> build/lib/custodian/vasp +copying custodian/vasp/interpreter.py -> build/lib/custodian/vasp copying custodian/vasp/io.py -> build/lib/custodian/vasp +copying custodian/vasp/__init__.py -> build/lib/custodian/vasp +copying custodian/vasp/jobs.py -> build/lib/custodian/vasp +creating build/lib/custodian/cli +copying custodian/cli/run_vasp.py -> build/lib/custodian/cli +copying custodian/cli/converge_kpoints.py -> build/lib/custodian/cli +copying custodian/cli/cstdn.py -> build/lib/custodian/cli +copying custodian/cli/run_nwchem.py -> build/lib/custodian/cli +copying custodian/cli/__init__.py -> build/lib/custodian/cli +copying custodian/cli/converge_geometry.py -> build/lib/custodian/cli +creating build/lib/custodian/qchem +copying custodian/qchem/handlers.py -> build/lib/custodian/qchem +copying custodian/qchem/utils.py -> build/lib/custodian/qchem +copying custodian/qchem/__init__.py -> build/lib/custodian/qchem +copying custodian/qchem/jobs.py -> build/lib/custodian/qchem creating build/lib/custodian/nwchem copying custodian/nwchem/handlers.py -> build/lib/custodian/nwchem -copying custodian/nwchem/jobs.py -> build/lib/custodian/nwchem copying custodian/nwchem/__init__.py -> build/lib/custodian/nwchem +copying custodian/nwchem/jobs.py -> build/lib/custodian/nwchem creating build/lib/custodian/cp2k copying custodian/cp2k/handlers.py -> build/lib/custodian/cp2k -copying custodian/cp2k/interpreter.py -> build/lib/custodian/cp2k -copying custodian/cp2k/jobs.py -> build/lib/custodian/cp2k +copying custodian/cp2k/validators.py -> build/lib/custodian/cp2k copying custodian/cp2k/utils.py -> build/lib/custodian/cp2k +copying custodian/cp2k/interpreter.py -> build/lib/custodian/cp2k copying custodian/cp2k/__init__.py -> build/lib/custodian/cp2k -copying custodian/cp2k/validators.py -> build/lib/custodian/cp2k -creating build/lib/custodian/cli -copying custodian/cli/cstdn.py -> build/lib/custodian/cli -copying custodian/cli/run_nwchem.py -> build/lib/custodian/cli -copying custodian/cli/run_vasp.py -> build/lib/custodian/cli -copying custodian/cli/converge_kpoints.py -> build/lib/custodian/cli -copying custodian/cli/__init__.py -> build/lib/custodian/cli -copying custodian/cli/converge_geometry.py -> build/lib/custodian/cli -creating build/lib/custodian/feff -copying custodian/feff/handlers.py -> build/lib/custodian/feff -copying custodian/feff/interpreter.py -> build/lib/custodian/feff -copying custodian/feff/jobs.py -> build/lib/custodian/feff -copying custodian/feff/__init__.py -> build/lib/custodian/feff -creating build/lib/custodian/lobster -copying custodian/lobster/handlers.py -> build/lib/custodian/lobster -copying custodian/lobster/jobs.py -> build/lib/custodian/lobster -copying custodian/lobster/__init__.py -> build/lib/custodian/lobster -creating build/lib/custodian/gaussian -copying custodian/gaussian/handlers.py -> build/lib/custodian/gaussian -copying custodian/gaussian/jobs.py -> build/lib/custodian/gaussian -copying custodian/gaussian/__init__.py -> build/lib/custodian/gaussian +copying custodian/cp2k/jobs.py -> build/lib/custodian/cp2k running egg_info creating custodian.egg-info writing custodian.egg-info/PKG-INFO @@ -1354,62 +1390,62 @@ creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/custodian +creating build/bdist.linux-armv7l/wheel/custodian/lobster +copying build/lib/custodian/lobster/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster +copying build/lib/custodian/lobster/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster +copying build/lib/custodian/lobster/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster +creating build/bdist.linux-armv7l/wheel/custodian/feff +copying build/lib/custodian/feff/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/feff +copying build/lib/custodian/feff/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/feff +copying build/lib/custodian/feff/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/feff +copying build/lib/custodian/feff/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/feff +copying build/lib/custodian/utils.py -> build/bdist.linux-armv7l/wheel/./custodian +copying build/lib/custodian/custodian.py -> build/bdist.linux-armv7l/wheel/./custodian +creating build/bdist.linux-armv7l/wheel/custodian/gaussian +copying build/lib/custodian/gaussian/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian +copying build/lib/custodian/gaussian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian +copying build/lib/custodian/gaussian/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian creating build/bdist.linux-armv7l/wheel/custodian/ansible copying build/lib/custodian/ansible/actions.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible copying build/lib/custodian/ansible/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/ansible -copying build/lib/custodian/custodian.py -> build/bdist.linux-armv7l/wheel/./custodian -creating build/bdist.linux-armv7l/wheel/custodian/qchem -copying build/lib/custodian/qchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem -copying build/lib/custodian/qchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem -copying build/lib/custodian/qchem/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem -copying build/lib/custodian/qchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem -copying build/lib/custodian/utils.py -> build/bdist.linux-armv7l/wheel/./custodian creating build/bdist.linux-armv7l/wheel/custodian/vasp copying build/lib/custodian/vasp/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp -copying build/lib/custodian/vasp/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp -copying build/lib/custodian/vasp/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp -copying build/lib/custodian/vasp/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp -copying build/lib/custodian/vasp/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp +copying build/lib/custodian/vasp/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp +copying build/lib/custodian/vasp/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp copying build/lib/custodian/vasp/io.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp +copying build/lib/custodian/vasp/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp +copying build/lib/custodian/vasp/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/vasp +creating build/bdist.linux-armv7l/wheel/custodian/cli +copying build/lib/custodian/cli/run_vasp.py -> build/bdist.linux-armv7l/wheel/./custodian/cli +copying build/lib/custodian/cli/converge_kpoints.py -> build/bdist.linux-armv7l/wheel/./custodian/cli +copying build/lib/custodian/cli/cstdn.py -> build/bdist.linux-armv7l/wheel/./custodian/cli +copying build/lib/custodian/cli/run_nwchem.py -> build/bdist.linux-armv7l/wheel/./custodian/cli +copying build/lib/custodian/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cli +copying build/lib/custodian/cli/converge_geometry.py -> build/bdist.linux-armv7l/wheel/./custodian/cli +copying build/lib/custodian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian +creating build/bdist.linux-armv7l/wheel/custodian/qchem +copying build/lib/custodian/qchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem +copying build/lib/custodian/qchem/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem +copying build/lib/custodian/qchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem +copying build/lib/custodian/qchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/qchem creating build/bdist.linux-armv7l/wheel/custodian/nwchem copying build/lib/custodian/nwchem/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem -copying build/lib/custodian/nwchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem copying build/lib/custodian/nwchem/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem -copying build/lib/custodian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian +copying build/lib/custodian/nwchem/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/nwchem creating build/bdist.linux-armv7l/wheel/custodian/cp2k copying build/lib/custodian/cp2k/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k -copying build/lib/custodian/cp2k/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k -copying build/lib/custodian/cp2k/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k +copying build/lib/custodian/cp2k/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/utils.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k +copying build/lib/custodian/cp2k/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k copying build/lib/custodian/cp2k/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k -copying build/lib/custodian/cp2k/validators.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k -creating build/bdist.linux-armv7l/wheel/custodian/cli -copying build/lib/custodian/cli/cstdn.py -> build/bdist.linux-armv7l/wheel/./custodian/cli -copying build/lib/custodian/cli/run_nwchem.py -> build/bdist.linux-armv7l/wheel/./custodian/cli -copying build/lib/custodian/cli/run_vasp.py -> build/bdist.linux-armv7l/wheel/./custodian/cli -copying build/lib/custodian/cli/converge_kpoints.py -> build/bdist.linux-armv7l/wheel/./custodian/cli -copying build/lib/custodian/cli/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/cli -copying build/lib/custodian/cli/converge_geometry.py -> build/bdist.linux-armv7l/wheel/./custodian/cli -creating build/bdist.linux-armv7l/wheel/custodian/feff -copying build/lib/custodian/feff/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/feff -copying build/lib/custodian/feff/interpreter.py -> build/bdist.linux-armv7l/wheel/./custodian/feff -copying build/lib/custodian/feff/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/feff -copying build/lib/custodian/feff/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/feff -creating build/bdist.linux-armv7l/wheel/custodian/lobster -copying build/lib/custodian/lobster/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster -copying build/lib/custodian/lobster/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster -copying build/lib/custodian/lobster/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/lobster -creating build/bdist.linux-armv7l/wheel/custodian/gaussian -copying build/lib/custodian/gaussian/handlers.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian -copying build/lib/custodian/gaussian/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian -copying build/lib/custodian/gaussian/__init__.py -> build/bdist.linux-armv7l/wheel/./custodian/gaussian +copying build/lib/custodian/cp2k/jobs.py -> build/bdist.linux-armv7l/wheel/./custodian/cp2k running install_egg_info Copying custodian.egg-info to build/bdist.linux-armv7l/wheel/./custodian-2024.6.24.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/custodian-2024.6.24.dist-info/WHEEL -creating '/build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/.tmp-94x5lnt0/custodian-2024.6.24-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it +creating '/build/reproducible-path/custodian-2024.6.24/.pybuild/cpython3_3.12_custodian/.tmp-q4iufw2e/custodian-2024.6.24-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'custodian/__init__.py' adding 'custodian/custodian.py' adding 'custodian/utils.py' @@ -2157,7 +2193,7 @@ tests/vasp/test_utils.py .. [ 95%] tests/vasp/test_validators.py ....... [100%] -========== 159 passed, 4 skipped, 16 deselected in 447.23s (0:07:27) =========== +========== 159 passed, 4 skipped, 16 deselected in 296.55s (0:04:56) =========== make[1]: Leaving directory '/build/reproducible-path/custodian-2024.6.24' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild @@ -2198,12 +2234,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/9046/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/21225 and its subdirectories -I: Current time: Wed Nov 20 13:26:54 -12 2024 -I: pbuilder-time-stamp: 1732152414 +I: removing directory /srv/workspace/pbuilder/9046 and its subdirectories +I: Current time: Thu Nov 21 15:39:08 +14 2024 +I: pbuilder-time-stamp: 1732153148 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/custodian_2024.6.24-1.diff: 81.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/custodian_2024.6.24-1.diff.gz b2/build.log: 87.6% -- replaced with stdout Compressing the 1st log... b1/build.log: 87.8% -- replaced with stdout Thu Nov 21 01:40:51 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_custodian_trixie_armhf_1732153251 + touch /var/log/reproducible-builds/diffoscope_stamp_custodian_trixie_armhf_1732153251 + RESULT=0 + systemd-run '--description=diffoscope on custodian/2024.6.24-1 in trixie/armhf' --slice=rb-build-diffoscope.slice -u rb-diffoscope-armhf_17-10588 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5 --run-session -c jenkins-reproducible-trixie-diffoscope-bb13fe26-2dab-4a74-a047-b64b9809ffc9 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/dbd-tmp-DoL0R2w ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/custodian_2024.6.24-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/custodian_2024.6.24-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/custodian_2024.6.24-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1/custodian_2024.6.24-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2/custodian_2024.6.24-1_armhf.changes' + false + set +x Running as unit: rb-diffoscope-armhf_17-10588.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/custodian_2024.6.24-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/custodian_2024.6.24-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/custodian_2024.6.24-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b1/custodian_2024.6.24-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.oAZcjsy5/b2/custodian_2024.6.24-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.340s) 0.340s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.018s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 642ms CPU time consumed: 642ms _ _ _ ___ _ _ ___| |_ ___ __| (_) __ _ _ __ / __| | | / __| __/ _ \ / _` | |/ _` | '_ \ | (__| |_| \__ \ || (_) | (_| | | (_| | | | | \___|\__,_|___/\__\___/ \__,_|_|\__,_|_| |_| Thu Nov 21 01:40:52 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Thu Nov 21 01:40:52 UTC 2024 I: custodian from trixie built successfully and reproducibly on armhf. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-21 01:40:53] INFO: Starting at 2024-11-21 01:40:53.512683 [2024-11-21 01:40:53] INFO: Generating the pages of 1 package(s) [2024-11-21 01:40:53] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/custodian_2024.6.24-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/custodian_2024.6.24-1.diff.gz is missing [2024-11-21 01:40:53] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/armhf/custodian didn't produce a buildlog, even though it has been built. [2024-11-21 01:40:53] INFO: Finished at 2024-11-21 01:40:53.754070, took: 0:00:00.241393 Thu Nov 21 01:40:53 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/armhf/custodian.html Thu Nov 21 01:40:53 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Nov 21 01:40:53 UTC 2024 I: Submitting 12K b1/custodian_2024.6.24-1_armhf.buildinfo.asc https://buildinfo.debian.net/e5cbbb5b23083841c65e2218740f8ff81bf578ef/custodian_2024.6.24-1_all Thu Nov 21 01:40:54 UTC 2024 I: Submitting 12K b2/custodian_2024.6.24-1_armhf.buildinfo.asc https://buildinfo.debian.net/7afeb6bd878f4577d50831cf95836da27c832880/custodian_2024.6.24-1_all Thu Nov 21 01:40:55 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Nov 21 01:40:55 UTC 2024 I: Done submitting .buildinfo files. Thu Nov 21 01:40:55 UTC 2024 I: Removing signed custodian_2024.6.24-1_armhf.buildinfo.asc files: removed './b1/custodian_2024.6.24-1_armhf.buildinfo.asc' removed './b2/custodian_2024.6.24-1_armhf.buildinfo.asc' 1732153255 armhf trixie custodian Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/armhf/custodian_2024.6.24-1.rbuild.log: 86.7% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/armhf/custodian_2024.6.24-1.rbuild.log.gz [2024-11-21 01:40:55] INFO: Starting at 2024-11-21 01:40:55.681365 [2024-11-21 01:40:55] INFO: Generating the pages of 1 package(s) [2024-11-21 01:40:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/arm64/custodian_2024.6.24-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/arm64/custodian_2024.6.24-1.diff.gz is missing [2024-11-21 01:40:55] INFO: Finished at 2024-11-21 01:40:55.910716, took: 0:00:00.229356 All cleanup done. Thu Nov 21 01:40:56 UTC 2024 - total duration: 0h 28m 0s. Thu Nov 21 01:40:56 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-4XvAbbSW, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 28min 3.527s CPU time consumed: 10.550s