Running as unit: rb-build-i386_1-45443.service ==================================================================================== Fri Nov 22 14:24:28 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_1) on jenkins, called using "ionos2-i386 ionos6-i386" as arguments. Fri Nov 22 14:24:28 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-T8BE0Und" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 14:24:28 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Fri Nov 22 14:24:28 UTC 2024 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-8FvPI3' Fri Nov 22 14:24:29 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos6-i386.debian.net is marked as down. Fri Nov 22 14:24:29 UTC 2024 - checking via ssh if ionos6-i386.debian.net is up. removed '/tmp/read-only-fs-test-PwwdPZ' ok, let's check if q2-quality-control is building anywhere yet… ok, q2-quality-control is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of q2-quality-control in unstable on i386 on jenkins now. 1st build will be done on ionos2-i386.debian.net. 2nd build will be done on ionos6-i386.debian.net. ============================================================================= Fri Nov 22 14:24:45 UTC 2024 I: starting to build q2-quality-control/unstable/i386 on jenkins on '2024-11-22 14:24' Fri Nov 22 14:24:45 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_1/45443/console.log 1732285485 i386 unstable q2-quality-control Fri Nov 22 14:24:45 UTC 2024 I: Downloading source for unstable/q2-quality-control=2024.5.0-1 --2024-11-22 14:24:45-- http://deb.debian.org/debian/pool/main/q/q2-quality-control/q2-quality-control_2024.5.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2701 (2.6K) [text/prs.lines.tag] Saving to: ‘q2-quality-control_2024.5.0-1.dsc’ 0K .. 100% 396M=0s 2024-11-22 14:24:45 (396 MB/s) - ‘q2-quality-control_2024.5.0-1.dsc’ saved [2701/2701] --2024-11-22 14:24:45-- http://deb.debian.org/debian/pool/main/q/q2-quality-control/q2-quality-control_2024.5.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2701 (2.6K) [text/prs.lines.tag] Saving to: ‘q2-quality-control_2024.5.0-1.dsc’ 0K .. 100% 396M=0s 2024-11-22 14:24:45 (396 MB/s) - ‘q2-quality-control_2024.5.0-1.dsc’ saved [2701/2701] Fri Nov 22 14:24:45 UTC 2024 I: q2-quality-control_2024.5.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: q2-quality-control Binary: q2-quality-control Architecture: all Version: 2024.5.0-1 Maintainer: Debian Med Packaging Team Uploaders: Liubov Chuprikova , Steffen Moeller , Étienne Mollier Homepage: https://qiime2.org/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/q2-quality-control Vcs-Git: https://salsa.debian.org/med-team/q2-quality-control.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pytest-cov Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-pytest-cov , python3-biom-format , python3-h5py , python3-numpy , python3-pandas , python3-scipy (>= 1.10~) , python3-seaborn , qiime (>= 2024.5) , q2templates (>= 2024.5) , q2-taxa (>= 2024.5) , q2-feature-table (>= 2024.5) , r-base-core , bowtie2 , ncbi-blast+ , samtools , vsearch Package-List: q2-quality-control deb science optional arch=all Checksums-Sha1: b371cecd66833fcd11a4a6534f279686f130ddf3 1125387 q2-quality-control_2024.5.0.orig.tar.gz 89fe795d26649897be6444bd8eddd23a62bee21a 7180 q2-quality-control_2024.5.0-1.debian.tar.xz Checksums-Sha256: cce17c4825687dcd65fe2e979e976958a3ba932f78433ad3fb911bce6e8b816c 1125387 q2-quality-control_2024.5.0.orig.tar.gz 7f5fb5a54d8f0bed192d9464045ede75acaec76f613bd9022eabb25ef7b8f776 7180 q2-quality-control_2024.5.0-1.debian.tar.xz Files: 5ddd91a837081b32314763ec6d71ceb9 1125387 q2-quality-control_2024.5.0.orig.tar.gz 83cefeeb5e9825e3950ae9a824041c10 7180 q2-quality-control_2024.5.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmZ8CXUACgkQPCZ2P2xn 5uLS2g//QV8o+rBUvyn4ST6jAWH9XvbN3pNUGL+8Y+h0NZ8N3PGLC3vgEviV5Iox tyH1QkeZZtlCZaz4Aw/gp3fQwSGeApDpVnm8ByY0wekqBJHL0F6ZXy7tkZvn7OVf txKcQv0G/k1h4eaZwM7GeIVZ1WWc2F4zvQlN9g8oQ4sHR7O64zpntsjsUSE+m7YX ymifL+sIxupFrosZVZ7nZCrz9N/TpNTXVBU1iueHFH7bjbjHRvtpObkVLim3fexq 2qrL+aARKHiMNfvwOs8fbbvYt0Whnrkw/QkWeXqLkR/QxySS1FMcNfxTrpNCypcx XdjXsf/f2WNHYS/vW6OCUFwaN9U6/IKpupHAYzW8r36N/X/hvvJiKMT2bn33MyHe HSFjGsGJae2ulb1e0NtVxITewEZuSncYzBCax+BiXwcy0uegC08OwJJFXKTIrwgn AYqUzAB2zwokEQMq1CEirMY70O74TDVpfGl8WxsUtc9rWs6oFkqAD0LllfWJ57VG ZCiQCIN9WBfnZTYCIGT9ZhsFAbyHSD7aiMnYzwIKnoN0fYy3k9nnGGVQ4lQeEnfC 4whagIrq35NJ597AqtWMkkOCxvda+v8jBzL8QwLZZHaGTFaPEkTz9jeUFJDc7OYa tseBXP8VaIeLtHtZuqoAR0jphAKD+LcoLQFq59beRFtcvmmjn7I= =uVEW -----END PGP SIGNATURE----- Fri Nov 22 14:24:45 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 14:24:45 UTC 2024 I: Starting 1st build on remote node ionos2-i386.debian.net. Fri Nov 22 14:24:45 UTC 2024 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Fri Nov 22 14:24:45 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Fri Nov 22 14:24:45 UTC 2024 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-nscGlh' ==================================================================================== Fri Nov 22 14:24:46 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos2-i386, called using "1 q2-quality-control unstable /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC 2024.5.0-1" as arguments. Fri Nov 22 14:24:46 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-FHfY3dh8" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 14:24:46 UTC 2024 I: Downloading source for unstable/q2-quality-control=2024.5.0-1 Reading package lists... NOTICE: 'q2-quality-control' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/q2-quality-control.git Please use: git clone https://salsa.debian.org/med-team/q2-quality-control.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1135 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main q2-quality-control 2024.5.0-1 (dsc) [2701 B] Get:2 http://deb.debian.org/debian unstable/main q2-quality-control 2024.5.0-1 (tar) [1125 kB] Get:3 http://deb.debian.org/debian unstable/main q2-quality-control 2024.5.0-1 (diff) [7180 B] Fetched 1135 kB in 0s (16.2 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'q2-quality-control' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/q2-quality-control.git Please use: git clone https://salsa.debian.org/med-team/q2-quality-control.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1135 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main q2-quality-control 2024.5.0-1 (dsc) [2701 B] Get:2 http://deb.debian.org/debian unstable/main q2-quality-control 2024.5.0-1 (tar) [1125 kB] Get:3 http://deb.debian.org/debian unstable/main q2-quality-control 2024.5.0-1 (diff) [7180 B] Fetched 1135 kB in 0s (16.2 MB/s) Download complete and in download only mode ============================================================================= Building q2-quality-control in unstable on i386 on ionos2-i386 now. Date: Fri Nov 22 15:24:47 CET 2024 Date UTC: Fri Nov 22 14:24:47 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 02:24:47 -12 2024 I: pbuilder-time-stamp: 1732285487 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [q2-quality-control_2024.5.0-1.dsc] I: copying [./q2-quality-control_2024.5.0.orig.tar.gz] I: copying [./q2-quality-control_2024.5.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Jun 26 12:28:37 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./q2-quality-control_2024.5.0-1.dsc: no acceptable signature found dpkg-source: info: extracting q2-quality-control in q2-quality-control-2024.5.0 dpkg-source: info: unpacking q2-quality-control_2024.5.0.orig.tar.gz dpkg-source: info: unpacking q2-quality-control_2024.5.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying configparser.patch dpkg-source: info: applying pandas2.0.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15413/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='eceb2c705c6a492b9d367935054212c4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15413' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC/pbuilderrc_6niz --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC/b1 --logfile b1/build.log q2-quality-control_2024.5.0-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15413/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-h5py, python3-numpy, python3-pandas, python3-scipy (>= 1.10~), python3-seaborn, qiime (>= 2024.5), q2templates (>= 2024.5), q2-taxa (>= 2024.5), q2-feature-table (>= 2024.5), r-base-core, bowtie2, ncbi-blast+, samtools, vsearch dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.10~); however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on qiime (>= 2024.5); however: Package qiime is not installed. pbuilder-satisfydepends-dummy depends on q2templates (>= 2024.5); however: Package q2templates is not installed. pbuilder-satisfydepends-dummy depends on q2-taxa (>= 2024.5); however: Package q2-taxa is not installed. pbuilder-satisfydepends-dummy depends on q2-feature-table (>= 2024.5); however: Package q2-feature-table is not installed. pbuilder-satisfydepends-dummy depends on r-base-core; however: Package r-base-core is not installed. pbuilder-satisfydepends-dummy depends on bowtie2; however: Package bowtie2 is not installed. pbuilder-satisfydepends-dummy depends on ncbi-blast+; however: Package ncbi-blast+ is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. pbuilder-satisfydepends-dummy depends on vsearch; however: Package vsearch is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhts3t64{a} libhtscodecs2{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblmdb0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libnsl2{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libsodium23{a} libssh2-1t64{a} libsz2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} ncbi-blast+{a} ncbi-data{a} netbase{a} node-fortawesome-fontawesome-free{a} node-normalize.css{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-bcrypt{a} python3-bibtexparser{a} python3-biom-format{a} python3-blinker{a} python3-brotli{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cryptography{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-globus-sdk{a} python3-greenlet{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jwt{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parsl{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-sympy{a} python3-tblib{a} python3-tk{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-minimal{a} python3.13-tk{a} q2templates{a} qiime{a} r-base-core{a} readline-common{a} samtools{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} unzip{a} x11-common{a} xdg-utils{a} zip{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libx11-protocol-perl lynx node-jquery publicsuffix python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-pooch python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-simplejson python3-sqlalchemy-ext python3-tables q2-demux q2-feature-classifier q2-quality-filter q2cli r-base-dev r-cran-plotly r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 262 newly installed, 0 to remove and 0 not upgraded. Need to get 195 MB of archives. After unpacking 848 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: q2-taxa (>= 2024.5) but it is not installable Depends: q2-feature-table (>= 2024.5) but it is not installable Depends: bowtie2 which is a virtual package and is not provided by any available package Depends: vsearch which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhts3t64{a} libhtscodecs2{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblmdb0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libnsl2{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libsodium23{a} libssh2-1t64{a} libsz2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} ncbi-blast+{a} ncbi-data{a} netbase{a} node-fortawesome-fontawesome-free{a} node-normalize.css{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-bcrypt{a} python3-bibtexparser{a} python3-biom-format{a} python3-blinker{a} python3-brotli{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cryptography{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-globus-sdk{a} python3-greenlet{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jwt{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parsl{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-sympy{a} python3-tblib{a} python3-tk{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-minimal{a} python3.13-tk{a} q2templates{a} qiime{a} r-base-core{a} readline-common{a} samtools{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} unzip{a} x11-common{a} xdg-utils{a} zip{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libx11-protocol-perl lynx node-jquery publicsuffix python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-pooch python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-simplejson python3-sqlalchemy-ext python3-tables q2-demux q2-feature-classifier q2-quality-filter q2cli r-base-dev r-cran-plotly r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 262 newly installed, 0 to remove and 0 not upgraded. Need to get 195 MB of archives. After unpacking 848 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15413 and its subdirectories Starting cleanup. All cleanup done. Fri Nov 22 14:25:09 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-FHfY3dh8, removing. /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 14:25 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 14:24 b2 -rw-r--r-- 1 jenkins jenkins 2701 Jun 26 12:31 q2-quality-control_2024.5.0-1.dsc -rw------- 1 jenkins jenkins 3888 Nov 22 14:24 rbuildlog.Crcgspj /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC/b1: total 20 -rw-r--r-- 1 jenkins jenkins 19294 Nov 22 14:25 build.log /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC/b2: total 0 Fri Nov 22 14:25:10 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 02:24:47 -12 2024 I: pbuilder-time-stamp: 1732285487 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [q2-quality-control_2024.5.0-1.dsc] I: copying [./q2-quality-control_2024.5.0.orig.tar.gz] I: copying [./q2-quality-control_2024.5.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Jun 26 12:28:37 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./q2-quality-control_2024.5.0-1.dsc: no acceptable signature found dpkg-source: info: extracting q2-quality-control in q2-quality-control-2024.5.0 dpkg-source: info: unpacking q2-quality-control_2024.5.0.orig.tar.gz dpkg-source: info: unpacking q2-quality-control_2024.5.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying configparser.patch dpkg-source: info: applying pandas2.0.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15413/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='eceb2c705c6a492b9d367935054212c4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15413' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC/pbuilderrc_6niz --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.62xUFOXC/b1 --logfile b1/build.log q2-quality-control_2024.5.0-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos2-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15413/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-h5py, python3-numpy, python3-pandas, python3-scipy (>= 1.10~), python3-seaborn, qiime (>= 2024.5), q2templates (>= 2024.5), q2-taxa (>= 2024.5), q2-feature-table (>= 2024.5), r-base-core, bowtie2, ncbi-blast+, samtools, vsearch dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.10~); however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on qiime (>= 2024.5); however: Package qiime is not installed. pbuilder-satisfydepends-dummy depends on q2templates (>= 2024.5); however: Package q2templates is not installed. pbuilder-satisfydepends-dummy depends on q2-taxa (>= 2024.5); however: Package q2-taxa is not installed. pbuilder-satisfydepends-dummy depends on q2-feature-table (>= 2024.5); however: Package q2-feature-table is not installed. pbuilder-satisfydepends-dummy depends on r-base-core; however: Package r-base-core is not installed. pbuilder-satisfydepends-dummy depends on bowtie2; however: Package bowtie2 is not installed. pbuilder-satisfydepends-dummy depends on ncbi-blast+; however: Package ncbi-blast+ is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. pbuilder-satisfydepends-dummy depends on vsearch; however: Package vsearch is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhts3t64{a} libhtscodecs2{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblmdb0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libnsl2{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libsodium23{a} libssh2-1t64{a} libsz2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} ncbi-blast+{a} ncbi-data{a} netbase{a} node-fortawesome-fontawesome-free{a} node-normalize.css{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-bcrypt{a} python3-bibtexparser{a} python3-biom-format{a} python3-blinker{a} python3-brotli{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cryptography{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-globus-sdk{a} python3-greenlet{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jwt{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parsl{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-sympy{a} python3-tblib{a} python3-tk{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-minimal{a} python3.13-tk{a} q2templates{a} qiime{a} r-base-core{a} readline-common{a} samtools{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} unzip{a} x11-common{a} xdg-utils{a} zip{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libx11-protocol-perl lynx node-jquery publicsuffix python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-pooch python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-simplejson python3-sqlalchemy-ext python3-tables q2-demux q2-feature-classifier q2-quality-filter q2cli r-base-dev r-cran-plotly r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 262 newly installed, 0 to remove and 0 not upgraded. Need to get 195 MB of archives. After unpacking 848 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: q2-taxa (>= 2024.5) but it is not installable Depends: q2-feature-table (>= 2024.5) but it is not installable Depends: bowtie2 which is a virtual package and is not provided by any available package Depends: vsearch which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhts3t64{a} libhtscodecs2{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblmdb0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libnsl2{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libsodium23{a} libssh2-1t64{a} libsz2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} ncbi-blast+{a} ncbi-data{a} netbase{a} node-fortawesome-fontawesome-free{a} node-normalize.css{a} openssl{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-bcrypt{a} python3-bibtexparser{a} python3-biom-format{a} python3-blinker{a} python3-brotli{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cryptography{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-fonttools{a} python3-fs{a} python3-globus-sdk{a} python3-greenlet{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-jwt{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parsl{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-scipy{a} python3-seaborn{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-sympy{a} python3-tblib{a} python3-tk{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-ufolib2{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-minimal{a} python3.13-tk{a} q2templates{a} qiime{a} r-base-core{a} readline-common{a} samtools{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} unzip{a} x11-common{a} xdg-utils{a} zip{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libx11-protocol-perl lynx node-jquery publicsuffix python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-openssl python3-pooch python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-simplejson python3-sqlalchemy-ext python3-tables q2-demux q2-feature-classifier q2-quality-filter q2cli r-base-dev r-cran-plotly r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 262 newly installed, 0 to remove and 0 not upgraded. Need to get 195 MB of archives. After unpacking 848 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15413 and its subdirectories q2-quality-control failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/q2-quality-control_2024.5.0-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/q2-quality-control_2024.5.0-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/q2-quality-control_2024.5.0-1.build1.log.gz' Fri Nov 22 14:25:11 UTC 2024 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 75.9% -- replaced with stdout Fri Nov 22 14:25:11 UTC 2024 W: Downloading the build dependencies failed Fri Nov 22 14:25:11 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Fri Nov 22 14:25:11 UTC 2024 W: Network problems are automatically rescheduled after some hours. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-22 14:25:11] INFO: Starting at 2024-11-22 14:25:11.810103 [2024-11-22 14:25:11] INFO: Generating the pages of 1 package(s) [2024-11-22 14:25:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/q2-quality-control_2024.5.0-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/q2-quality-control_2024.5.0-1.diff.gz is missing [2024-11-22 14:25:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/q2-quality-control_2024.5.0-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/q2-quality-control_2024.5.0-1.diff.gz is missing [2024-11-22 14:25:12] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/i386/q2-quality-control didn't produce a buildlog, even though it has been built. [2024-11-22 14:25:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/q2-quality-control_2022.11.1-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/q2-quality-control_2022.11.1-2.diff.gz is missing [2024-11-22 14:25:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/q2-quality-control_2022.11.1-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/q2-quality-control_2022.11.1-2.diff.gz is missing [2024-11-22 14:25:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/armhf/q2-quality-control_2020.11.1-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/armhf/q2-quality-control_2020.11.1-3.diff.gz is missing [2024-11-22 14:25:12] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/i386/q2-quality-control_2020.11.1-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/i386/q2-quality-control_2020.11.1-3.diff.gz is missing [2024-11-22 14:25:12] INFO: Finished at 2024-11-22 14:25:12.470542, took: 0:00:00.660444 Fri Nov 22 14:25:12 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/i386/q2-quality-control.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/q2-quality-control_2024.5.0-1.rbuild.log: 72.3% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/q2-quality-control_2024.5.0-1.rbuild.log.gz [2024-11-22 14:25:12] INFO: Starting at 2024-11-22 14:25:12.859255 [2024-11-22 14:25:12] INFO: Generating the pages of 1 package(s) [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/q2-quality-control_2024.5.0-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/q2-quality-control_2024.5.0-1.diff.gz is missing [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/q2-quality-control_2024.5.0-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/q2-quality-control_2024.5.0-1.diff.gz is missing [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/q2-quality-control_2024.5.0-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/q2-quality-control_2024.5.0-1.diff.gz is missing [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/q2-quality-control_2022.11.1-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/q2-quality-control_2022.11.1-2.diff.gz is missing [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/q2-quality-control_2022.11.1-2.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/q2-quality-control_2022.11.1-2.diff.gz is missing [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/armhf/q2-quality-control_2020.11.1-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/armhf/q2-quality-control_2020.11.1-3.diff.gz is missing [2024-11-22 14:25:13] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/i386/q2-quality-control_2020.11.1-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/i386/q2-quality-control_2020.11.1-3.diff.gz is missing [2024-11-22 14:25:13] INFO: Finished at 2024-11-22 14:25:13.562467, took: 0:00:00.703220 All cleanup done. Fri Nov 22 14:25:13 UTC 2024 - total duration: 0h 0m 43s. Fri Nov 22 14:25:13 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-T8BE0Und, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 44.922s CPU time consumed: 5.645s