Running as unit: rb-build-i386_10-32260.service ==================================================================================== Thu Nov 21 19:56:23 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_10) on jenkins, called using "ionos16-i386 ionos12-i386" as arguments. Thu Nov 21 19:56:23 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-qM7JVO1c" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 19:56:24 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Thu Nov 21 19:56:24 UTC 2024 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-7hjFys' Thu Nov 21 19:56:24 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos12-i386.debian.net is marked as down. Thu Nov 21 19:56:24 UTC 2024 - checking via ssh if ionos12-i386.debian.net is up. removed '/tmp/read-only-fs-test-73Z79P' ok, let's check if lefse is building anywhere yet… ok, lefse is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of lefse in trixie on i386 on jenkins now. 1st build will be done on ionos16-i386.debian.net. 2nd build will be done on ionos12-i386.debian.net. ============================================================================= Thu Nov 21 19:56:38 UTC 2024 I: starting to build lefse/trixie/i386 on jenkins on '2024-11-21 19:56' Thu Nov 21 19:56:38 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_10/32260/console.log 1732218998 i386 trixie lefse Thu Nov 21 19:56:38 UTC 2024 I: Downloading source for trixie/lefse=1.1.2-1 --2024-11-21 19:56:38-- http://deb.debian.org/debian/pool/main/l/lefse/lefse_1.1.2-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1970 (1.9K) [text/prs.lines.tag] Saving to: ‘lefse_1.1.2-1.dsc’ 0K . 100% 255M=0s 2024-11-21 19:56:38 (255 MB/s) - ‘lefse_1.1.2-1.dsc’ saved [1970/1970] --2024-11-21 19:56:38-- http://deb.debian.org/debian/pool/main/l/lefse/lefse_1.1.2-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1970 (1.9K) [text/prs.lines.tag] Saving to: ‘lefse_1.1.2-1.dsc’ 0K . 100% 255M=0s 2024-11-21 19:56:38 (255 MB/s) - ‘lefse_1.1.2-1.dsc’ saved [1970/1970] Thu Nov 21 19:56:38 UTC 2024 I: lefse_1.1.2-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: lefse Binary: lefse Architecture: all Version: 1.1.2-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/SegataLab/lefse Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/lefse Vcs-Git: https://salsa.debian.org/med-team/lefse.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools Package-List: lefse deb science optional arch=all Checksums-Sha1: cc372012f73084725cf0af9e3e5b39cbb70282b8 64149 lefse_1.1.2.orig.tar.gz 19ae27edf1f817ca1aee645dcae8f907b0831a8a 12512 lefse_1.1.2-1.debian.tar.xz Checksums-Sha256: ff4fcd792e11cd7f76597ca3b14c75521b442a965e3a708862dcbac8d4af65e1 64149 lefse_1.1.2.orig.tar.gz d26aa3f97f83a8a960d1b2d89b804fb67cab2bfd9641793375d1388f4e83f99a 12512 lefse_1.1.2-1.debian.tar.xz Files: a1350f72bfd877301f5f8de6fd679f4c 64149 lefse_1.1.2.orig.tar.gz 124c83f436c125530c55a0081d70eff8 12512 lefse_1.1.2-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmFStV0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGoQw//buNSVofYCTn5PMctZKlY8F8bY8lnuD/d Bt9XNEcp/+jHS8/4NzJo6ra9Q5gqslZarcf3rKHbPaU/Y8tYYtMFgtyXL3EfyuAv l1JDiu7UvEWoMnxHukalqaexAOxEKfIhyGJ9u424pWkQVK7mBzWmDbVPLrt69EL0 FhVhopfw+buTbI1oU9l67G/A5424AIIwslPx6ekKwwa8v0QqyHvPY0XPhYKdG4m/ 1Hly2ylgLtKYBBL0o11ka8RbcVIDx6P4K/lJcs/jXOZ5lv28LiypOZaMQCKGtGxB n8/6yMEPglUqLn5Of7liO78CYCy2T71lwhQjReIeDKXLFvOWuJz4lFDUkR6E1YzO Rvcp950IfJWhVMEMe6yy1xeSEdfSY74y5AQfKBh3NGxc/K8ExKlvnvlxeweqiijX QVgiXINH8r1qBHbDuLZsQDc2+DfDvmYpJg7P5IPtc5V/R2/rXSJhmcThxHtjGtdX /Q3pyBiSwJ4z3xBZnFUDuX9nFAcxOWcscO2UPH74uqgeiI1CVzhj1ApyavyrJGOT vNv3We5R1VqE7FOiF4zDZBCAneedRzhl2KMOCex9HOJwjOkGKWDZP3tNTTdj9AlD 64lD64dKjrI6AmzPq/fb4qqm6U9gWRyxEzqNeFWjLxFkWJccnDCGzAJJ9qGdqjqy 6oQ2or8w8Hc= =lXpe -----END PGP SIGNATURE----- Thu Nov 21 19:56:38 UTC 2024 I: Checking whether the package is not for us Thu Nov 21 19:56:38 UTC 2024 I: Starting 1st build on remote node ionos16-i386.debian.net. Thu Nov 21 19:56:38 UTC 2024 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Thu Nov 21 19:56:38 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Thu Nov 21 19:56:38 UTC 2024 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-OHuxxB' ==================================================================================== Thu Dec 25 02:19:38 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos16-i386, called using "1 lefse trixie /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm 1.1.2-1" as arguments. Thu Dec 25 02:19:38 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-uGi492Uy" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Dec 25 02:19:38 UTC 2025 I: Downloading source for trixie/lefse=1.1.2-1 Reading package lists... NOTICE: 'lefse' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lefse.git Please use: git clone https://salsa.debian.org/med-team/lefse.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 78.6 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (dsc) [1970 B] Get:2 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (tar) [64.1 kB] Get:3 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (diff) [12.5 kB] Fetched 78.6 kB in 0s (1765 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'lefse' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lefse.git Please use: git clone https://salsa.debian.org/med-team/lefse.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 78.6 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (dsc) [1970 B] Get:2 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (tar) [64.1 kB] Get:3 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (diff) [12.5 kB] Fetched 78.6 kB in 0s (1765 kB/s) Download complete and in download only mode ============================================================================= Building lefse in trixie on i386 on ionos16-i386 now. Date: Thu Dec 25 03:19:39 CET 2025 Date UTC: Thu Dec 25 02:19:39 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 24 14:19:39 -12 2025 I: pbuilder-time-stamp: 1766629179 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [lefse_1.1.2-1.dsc] I: copying [./lefse_1.1.2.orig.tar.gz] I: copying [./lefse_1.1.2-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Sep 28 06:25:33 2021 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lefse_1.1.2-1.dsc: no acceptable signature found dpkg-source: info: extracting lefse in lefse-1.1.2 dpkg-source: info: unpacking lefse_1.1.2.orig.tar.gz dpkg-source: info: unpacking lefse_1.1.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/112263/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='7239004b33634ddeac3daf561e303a4f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='112263' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_ITVs --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1 --logfile b1/build.log lefse_1.1.2-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/112263/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 28.6 MB of archives. After unpacking 110 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 12 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] Fetched 28.6 MB in 0s (91.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.7-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_i386.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:i386 (3.12.7-3) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20276 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_i386.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_i386.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21338 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_i386.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../09-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../22-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../24-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../30-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../31-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../32-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../33-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../34-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../35-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../36-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../37-python3-pkg-resources_74.1.2-2_all.deb ... Unpacking python3-pkg-resources (74.1.2-2) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../38-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../39-python3-setuptools_74.1.2-2_all.deb ... Unpacking python3-setuptools (74.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../40-dh-python_6.20241024_all.deb ... Unpacking dh-python (6.20241024) ... Selecting previously unselected package python3-all. Preparing to unpack .../41-python3-all_3.12.6-1_i386.deb ... Unpacking python3-all (3.12.6-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libkeyutils1:i386 (1.6.3-4) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Dec 25 02:19:57 UTC 2025. Universal Time is now: Thu Dec 25 02:19:57 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/lefse-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lefse_1.1.2-1_source.changes dpkg-buildpackage: info: source package lefse dpkg-buildpackage: info: source version 1.1.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build; python3.12 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/lefse/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/lefse-1.1.2/debian/lefse running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12 creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py to lefse_format_input.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py:274: SyntaxWarning: invalid escape sequence '\|' byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_cladogram.py to lefse_plot_cladogram.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_res.py to lefse_plot_res.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse.py to lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/qiime2lefse.py to qiime2lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_features.py to lefse_plot_features.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse2circlader.py to lefse2circlader.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_run.py to lefse_run.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/CClade.py to CClade.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py to AbundanceTable.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py:387: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ConstantsBreadCrumbs.py to ConstantsBreadCrumbs.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ValidateData.py to ValidateData.cpython-312.pyc running install_egg_info running egg_info creating lefse.egg-info writing lefse.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:161: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to lefse.egg-info/dependency_links.txt writing entry points to lefse.egg-info/entry_points.txt writing requirements to lefse.egg-info/requires.txt writing top-level names to lefse.egg-info/top_level.txt writing manifest file 'lefse.egg-info/SOURCES.txt' reading manifest file 'lefse.egg-info/SOURCES.txt' writing manifest file 'lefse.egg-info/SOURCES.txt' Copying lefse.egg-info to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse-1.1.2.egg-info Skipping SOURCES.txt running install_scripts Installing lefse2circlader.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_format_input.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_cladogram.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_features.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_res.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_run.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing qiime2lefse.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_python3 --shebang=/usr/bin/python3 I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_format_input.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_cladogram.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_res.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/qiime2lefse.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_features.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse2circlader.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_run.py make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'lefse' in '../lefse_1.1.2-1_all.deb'. dpkg-genbuildinfo --build=binary -O../lefse_1.1.2-1_i386.buildinfo dpkg-genchanges --build=binary -O../lefse_1.1.2-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/112263 and its subdirectories I: Current time: Wed Dec 24 14:20:08 -12 2025 I: pbuilder-time-stamp: 1766629208 Thu Dec 25 02:20:08 UTC 2025 I: Signing ./b1/lefse_1.1.2-1_i386.buildinfo as lefse_1.1.2-1_i386.buildinfo.asc Thu Dec 25 02:20:08 UTC 2025 I: Signed ./b1/lefse_1.1.2-1_i386.buildinfo as ./b1/lefse_1.1.2-1_i386.buildinfo.asc Thu Dec 25 02:20:08 UTC 2025 - build #1 for lefse/trixie/i386 on ionos16-i386 done. Starting cleanup. All cleanup done. Thu Dec 25 02:20:08 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-uGi492Uy, removing. /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 19:57 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 19:56 b2 -rw-r--r-- 1 jenkins jenkins 1970 Sep 28 2021 lefse_1.1.2-1.dsc -rw------- 1 jenkins jenkins 3050 Nov 21 19:56 rbuildlog.dXO8sAA /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1: total 212 -rw-r--r-- 1 jenkins jenkins 43838 Nov 21 19:57 build.log -rw-r--r-- 1 jenkins jenkins 12512 Nov 21 19:57 lefse_1.1.2-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1970 Nov 21 19:57 lefse_1.1.2-1.dsc -rw-r--r-- 1 jenkins jenkins 57392 Nov 21 19:57 lefse_1.1.2-1_all.deb -rw-r--r-- 1 jenkins jenkins 5704 Nov 21 19:57 lefse_1.1.2-1_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 6586 Nov 21 19:57 lefse_1.1.2-1_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1608 Nov 21 19:57 lefse_1.1.2-1_i386.changes -rw-r--r-- 1 jenkins jenkins 2001 Nov 21 19:57 lefse_1.1.2-1_source.changes -rw-r--r-- 1 jenkins jenkins 64149 Nov 21 19:57 lefse_1.1.2.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2: total 0 Thu Nov 21 19:57:10 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 24 14:19:39 -12 2025 I: pbuilder-time-stamp: 1766629179 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [lefse_1.1.2-1.dsc] I: copying [./lefse_1.1.2.orig.tar.gz] I: copying [./lefse_1.1.2-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Sep 28 06:25:33 2021 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lefse_1.1.2-1.dsc: no acceptable signature found dpkg-source: info: extracting lefse in lefse-1.1.2 dpkg-source: info: unpacking lefse_1.1.2.orig.tar.gz dpkg-source: info: unpacking lefse_1.1.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/112263/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='7239004b33634ddeac3daf561e303a4f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='112263' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_ITVs --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1 --logfile b1/build.log lefse_1.1.2-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/112263/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 28.6 MB of archives. After unpacking 110 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 12 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] Fetched 28.6 MB in 0s (91.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.7-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_i386.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:i386 (3.12.7-3) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20276 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_i386.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_i386.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21338 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_i386.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. 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Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../30-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../31-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../32-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../33-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../34-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../35-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../36-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Dec 25 02:19:57 UTC 2025. Universal Time is now: Thu Dec 25 02:19:57 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/lefse-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lefse_1.1.2-1_source.changes dpkg-buildpackage: info: source package lefse dpkg-buildpackage: info: source version 1.1.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build; python3.12 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/lefse/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/lefse-1.1.2/debian/lefse running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12 creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py to lefse_format_input.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py:274: SyntaxWarning: invalid escape sequence '\|' byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_cladogram.py to lefse_plot_cladogram.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_res.py to lefse_plot_res.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse.py to lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/qiime2lefse.py to qiime2lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_features.py to lefse_plot_features.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse2circlader.py to lefse2circlader.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_run.py to lefse_run.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/CClade.py to CClade.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py to AbundanceTable.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py:387: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ConstantsBreadCrumbs.py to ConstantsBreadCrumbs.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ValidateData.py to ValidateData.cpython-312.pyc running install_egg_info running egg_info creating lefse.egg-info writing lefse.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:161: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to lefse.egg-info/dependency_links.txt writing entry points to lefse.egg-info/entry_points.txt writing requirements to lefse.egg-info/requires.txt writing top-level names to lefse.egg-info/top_level.txt writing manifest file 'lefse.egg-info/SOURCES.txt' reading manifest file 'lefse.egg-info/SOURCES.txt' writing manifest file 'lefse.egg-info/SOURCES.txt' Copying lefse.egg-info to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse-1.1.2.egg-info Skipping SOURCES.txt running install_scripts Installing lefse2circlader.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_format_input.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_cladogram.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_features.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_res.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_run.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing qiime2lefse.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_python3 --shebang=/usr/bin/python3 I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_format_input.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_cladogram.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_res.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/qiime2lefse.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_features.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse2circlader.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_run.py make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'lefse' in '../lefse_1.1.2-1_all.deb'. dpkg-genbuildinfo --build=binary -O../lefse_1.1.2-1_i386.buildinfo dpkg-genchanges --build=binary -O../lefse_1.1.2-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/112263 and its subdirectories I: Current time: Wed Dec 24 14:20:08 -12 2025 I: pbuilder-time-stamp: 1766629208 Thu Nov 21 19:57:10 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Thu Nov 21 19:57:10 UTC 2024 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Thu Nov 21 19:57:10 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos12-i386.debian.net is marked as down. Thu Nov 21 19:57:10 UTC 2024 - checking via ssh if ionos12-i386.debian.net is up. removed '/tmp/read-only-fs-test-8KRHjw' ==================================================================================== Thu Nov 21 19:57:13 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos12-i386, called using "2 lefse trixie /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm 1.1.2-1" as arguments. Thu Nov 21 19:57:13 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-3ED7JWwL" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 19:57:13 UTC 2024 I: Downloading source for trixie/lefse=1.1.2-1 Reading package lists... NOTICE: 'lefse' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lefse.git Please use: git clone https://salsa.debian.org/med-team/lefse.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 78.6 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (dsc) [1970 B] Get:2 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (tar) [64.1 kB] Get:3 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (diff) [12.5 kB] Fetched 78.6 kB in 0s (2114 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'lefse' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/lefse.git Please use: git clone https://salsa.debian.org/med-team/lefse.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 78.6 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (dsc) [1970 B] Get:2 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (tar) [64.1 kB] Get:3 http://deb.debian.org/debian trixie/main lefse 1.1.2-1 (diff) [12.5 kB] Fetched 78.6 kB in 0s (2114 kB/s) Download complete and in download only mode ============================================================================= Re-Building lefse in trixie on i386 on ionos12-i386 now. Date: Thu Nov 21 20:57:13 CET 2024 Date UTC: Thu Nov 21 19:57:13 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_sFkw + case ${ARCH} in + let NUM_CPU-=3 + case $ARCH in + locale=de_CH + language=de + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' lefse = debian-installer -o lefse = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' lefse = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_sFkw --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2 --logfile b2/build.log lefse_1.1.2-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 09:57:14 +14 2024 I: pbuilder-time-stamp: 1732219034 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [lefse_1.1.2-1.dsc] I: copying [./lefse_1.1.2.orig.tar.gz] I: copying [./lefse_1.1.2-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Sep 28 06:25:33 2021 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lefse_1.1.2-1.dsc: no acceptable signature found dpkg-source: info: extracting lefse in lefse-1.1.2 dpkg-source: info: unpacking lefse_1.1.2.orig.tar.gz dpkg-source: info: unpacking lefse_1.1.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D01_modify_environment starting debug: Running on ionos12-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 21 19:57 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=80d36628cee74db4ae80c97eb52d3073 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=47562 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_sFkw --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2 --logfile b2/build.log lefse_1.1.2-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 28.6 MB of archives. After unpacking 110 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 12 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] Fetched 28.6 MB in 1s (53.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.7-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_i386.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:i386 (3.12.7-3) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20276 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_i386.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_i386.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21338 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_i386.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../09-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../22-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../24-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../30-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../31-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../32-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../33-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../34-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../35-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../36-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../37-python3-pkg-resources_74.1.2-2_all.deb ... Unpacking python3-pkg-resources (74.1.2-2) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../38-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../39-python3-setuptools_74.1.2-2_all.deb ... Unpacking python3-setuptools (74.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../40-dh-python_6.20241024_all.deb ... Unpacking dh-python (6.20241024) ... Selecting previously unselected package python3-all. Preparing to unpack .../41-python3-all_3.12.6-1_i386.deb ... Unpacking python3-all (3.12.6-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libkeyutils1:i386 (1.6.3-4) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Nov 21 19:57:45 UTC 2024. Universal Time is now: Thu Nov 21 19:57:45 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/47562/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/47562/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/lefse-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lefse_1.1.2-1_source.changes dpkg-buildpackage: info: source package lefse dpkg-buildpackage: info: source version 1.1.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build; python3.12 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/lefse/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/lefse-1.1.2/debian/lefse running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12 creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/CClade.py to CClade.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ValidateData.py to ValidateData.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ConstantsBreadCrumbs.py to ConstantsBreadCrumbs.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py to AbundanceTable.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py:387: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_cladogram.py to lefse_plot_cladogram.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_run.py to lefse_run.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py to lefse_format_input.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py:274: SyntaxWarning: invalid escape sequence '\|' byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_res.py to lefse_plot_res.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse.py to lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/qiime2lefse.py to qiime2lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_features.py to lefse_plot_features.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse2circlader.py to lefse2circlader.cpython-312.pyc running install_egg_info running egg_info creating lefse.egg-info writing lefse.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:161: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to lefse.egg-info/dependency_links.txt writing entry points to lefse.egg-info/entry_points.txt writing requirements to lefse.egg-info/requires.txt writing top-level names to lefse.egg-info/top_level.txt writing manifest file 'lefse.egg-info/SOURCES.txt' reading manifest file 'lefse.egg-info/SOURCES.txt' writing manifest file 'lefse.egg-info/SOURCES.txt' Copying lefse.egg-info to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse-1.1.2.egg-info Skipping SOURCES.txt running install_scripts Installing lefse2circlader.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_format_input.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_cladogram.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_features.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_plot_res.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing lefse_run.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin Installing qiime2lefse.py script to /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_installman --language=C make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_python3 --shebang=/usr/bin/python3 I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_cladogram.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_run.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_format_input.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_res.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/qiime2lefse.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_features.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse2circlader.py make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'lefse' in '../lefse_1.1.2-1_all.deb'. dpkg-genbuildinfo --build=binary -O../lefse_1.1.2-1_i386.buildinfo dpkg-genchanges --build=binary -O../lefse_1.1.2-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/47562/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/47562/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/47562 and its subdirectories I: Current time: Fri Nov 22 09:58:06 +14 2024 I: pbuilder-time-stamp: 1732219086 + false + set +x Thu Nov 21 19:58:06 UTC 2024 I: Signing ./b2/lefse_1.1.2-1_i386.buildinfo as lefse_1.1.2-1_i386.buildinfo.asc Thu Nov 21 19:58:06 UTC 2024 I: Signed ./b2/lefse_1.1.2-1_i386.buildinfo as ./b2/lefse_1.1.2-1_i386.buildinfo.asc Thu Nov 21 19:58:06 UTC 2024 - build #2 for lefse/trixie/i386 on ionos12-i386 done. Starting cleanup. All cleanup done. Thu Nov 21 19:58:06 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-3ED7JWwL, removing. /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm: total 60 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 19:57 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 19:58 b2 -rw-r--r-- 1 jenkins jenkins 1970 Sep 28 2021 lefse_1.1.2-1.dsc -rw------- 1 jenkins jenkins 47174 Nov 21 19:57 rbuildlog.dXO8sAA /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1: total 220 -rw-r--r-- 1 jenkins jenkins 43838 Nov 21 19:57 build.log -rw-r--r-- 1 jenkins jenkins 12512 Nov 21 19:57 lefse_1.1.2-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1970 Nov 21 19:57 lefse_1.1.2-1.dsc -rw-r--r-- 1 jenkins jenkins 57392 Nov 21 19:57 lefse_1.1.2-1_all.deb -rw-r--r-- 1 jenkins jenkins 5704 Nov 21 19:57 lefse_1.1.2-1_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 6586 Nov 21 19:57 lefse_1.1.2-1_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1608 Nov 21 19:57 lefse_1.1.2-1_i386.changes -rw-r--r-- 1 jenkins jenkins 2001 Nov 21 19:57 lefse_1.1.2-1_source.changes -rw-r--r-- 1 jenkins jenkins 64149 Nov 21 19:57 lefse_1.1.2.orig.tar.gz /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2: total 216 -rw-r--r-- 1 jenkins jenkins 45740 Nov 21 19:58 build.log -rw-r--r-- 1 jenkins jenkins 12512 Nov 21 19:58 lefse_1.1.2-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1970 Nov 21 19:58 lefse_1.1.2-1.dsc -rw-r--r-- 1 jenkins jenkins 57392 Nov 21 19:58 lefse_1.1.2-1_all.deb -rw-r--r-- 1 jenkins jenkins 5704 Nov 21 19:58 lefse_1.1.2-1_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 6586 Nov 21 19:58 lefse_1.1.2-1_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1608 Nov 21 19:58 lefse_1.1.2-1_i386.changes -rw-r--r-- 1 jenkins jenkins 2001 Nov 21 19:58 lefse_1.1.2-1_source.changes -rw-r--r-- 1 jenkins jenkins 64149 Nov 21 19:58 lefse_1.1.2.orig.tar.gz Thu Nov 21 19:58:07 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. Thu Nov 21 19:58:07 UTC 2024 I: lefse_1.1.2-1_i386.changes: Format: 1.8 Date: Tue, 28 Sep 2021 08:23:43 +0200 Source: lefse Binary: lefse Architecture: all Version: 1.1.2-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: lefse - determine features of organisms, clades, taxonomic units, genes Changes: lefse (1.1.2-1) unstable; urgency=medium . * Fix Homepage * Fix watch file * New upstream version * Standards-Version: 4.6.0 (routine-update) * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. * debian/rules: - buildsystem=pybuild - remove unneeded overrides * Build-Depends: python3-setuptools * Remove debian/get-orig-source * lintian-overrides: script-with-language-extension * Fix script names in autopkgtest * Inform users about changed names in debian/NEWS Checksums-Sha1: 4b77f59bf5e03780ea1b7471c3aa9bd99ae73ca2 57392 lefse_1.1.2-1_all.deb 29a15bc4af830cd643b25d525f0680ca86d92419 5704 lefse_1.1.2-1_i386.buildinfo Checksums-Sha256: cca388aed6f6d45d3c91bb490c7cff3dd68070650e9db84d676fcc4623d61654 57392 lefse_1.1.2-1_all.deb 68f58f71da49202518a505f1f190d488789324cb47c59ce157221b272b893a66 5704 lefse_1.1.2-1_i386.buildinfo Files: 52ed16762c0102c9bb7dd0b441ff7663 57392 science optional lefse_1.1.2-1_all.deb e3ebc2ddfad68e88771c44a547c4ecb1 5704 science optional lefse_1.1.2-1_i386.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/lefse_1.1.2-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/lefse_1.1.2-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/lefse_1.1.2-1.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/lefse_1.1.2-1.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/i386/lefse_1.1.2-1_i386.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/lefse_1.1.2-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-21 19:57:10.177701498 +0000 +++ b2/build.log 2024-11-21 19:58:06.995133419 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Dec 24 14:19:39 -12 2025 -I: pbuilder-time-stamp: 1766629179 +I: Current time: Fri Nov 22 09:57:14 +14 2024 +I: pbuilder-time-stamp: 1732219034 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,54 +29,86 @@ dpkg-source: info: applying 2to3.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/112263/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D01_modify_environment starting +debug: Running on ionos12-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 21 19:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='7239004b33634ddeac3daf561e303a4f' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='112263' - PS1='# ' - PS2='> ' + INVOCATION_ID=80d36628cee74db4ae80c97eb52d3073 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=47562 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_ITVs --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1 --logfile b1/build.log lefse_1.1.2-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/pbuilderrc_sFkw --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2 --logfile b2/build.log lefse_1.1.2-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/112263/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -181,7 +213,7 @@ Get: 61 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] -Fetched 28.6 MB in 0s (91.4 MB/s) +Fetched 28.6 MB in 1s (53.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) @@ -404,8 +436,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Dec 25 02:19:57 UTC 2025. -Universal Time is now: Thu Dec 25 02:19:57 UTC 2025. +Local time is now: Thu Nov 21 19:57:45 UTC 2024. +Universal Time is now: Thu Nov 21 19:57:45 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -462,7 +494,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/lefse-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lefse_1.1.2-1_source.changes +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/lefse-1.1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../lefse_1.1.2-1_source.changes dpkg-buildpackage: info: source package lefse dpkg-buildpackage: info: source version 1.1.2-1 dpkg-buildpackage: info: source distribution unstable @@ -491,21 +527,21 @@ running build running build_py creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse -copying lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse +copying lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse +copying lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse +copying lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse -copying lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse copying lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse -copying lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse creating /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom -copying lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom -copying lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom -copying lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom copying lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom +copying lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom +copying lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom +copying lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build; python3.12 -m unittest discover -v @@ -539,42 +575,42 @@ creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12 creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages +creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_cladogram.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_format_input.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_res.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/qiime2lefse.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__pycache__ -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_run.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse -creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/CClade.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/AbundanceTable.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__init__.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ConstantsBreadCrumbs.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom -creating /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__pycache__ -copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefsebiom/ValidateData.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse_plot_features.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse +copying /build/reproducible-path/lefse-1.1.2/.pybuild/cpython3_3.12_lefse/build/lefse/lefse2circlader.py -> /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/CClade.py to CClade.cpython-312.pyc +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ValidateData.py to ValidateData.cpython-312.pyc +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ConstantsBreadCrumbs.py to ConstantsBreadCrumbs.cpython-312.pyc +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py to AbundanceTable.cpython-312.pyc +/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py:387: SyntaxWarning: invalid escape sequence '\.' +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_cladogram.py to lefse_plot_cladogram.cpython-312.pyc +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_run.py to lefse_run.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py to lefse_format_input.cpython-312.pyc /usr/lib/python3.12/dist-packages/lefse/lefse_format_input.py:274: SyntaxWarning: invalid escape sequence '\|' -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_cladogram.py to lefse_plot_cladogram.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_res.py to lefse_plot_res.cpython-312.pyc +byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse.py to lefse.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/qiime2lefse.py to qiime2lefse.cpython-312.pyc -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_plot_features.py to lefse_plot_features.cpython-312.pyc byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse2circlader.py to lefse2circlader.cpython-312.pyc -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefse/lefse_run.py to lefse_run.cpython-312.pyc -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/CClade.py to CClade.cpython-312.pyc -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py to AbundanceTable.cpython-312.pyc -/usr/lib/python3.12/dist-packages/lefsebiom/AbundanceTable.py:387: SyntaxWarning: invalid escape sequence '\.' -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/__init__.py to __init__.cpython-312.pyc -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ConstantsBreadCrumbs.py to ConstantsBreadCrumbs.cpython-312.pyc -byte-compiling /build/reproducible-path/lefse-1.1.2/debian/lefse/usr/lib/python3.12/dist-packages/lefsebiom/ValidateData.py to ValidateData.cpython-312.pyc running install_egg_info running egg_info creating lefse.egg-info @@ -614,13 +650,13 @@ debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/lefse-1.1.2' dh_python3 --shebang=/usr/bin/python3 -I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_format_input.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_cladogram.py +I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_run.py +I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_format_input.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_res.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/qiime2lefse.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_plot_features.py I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse2circlader.py -I: dh_python3 tools:113: replacing shebang in debian/lefse/usr/bin/lefse_run.py make[1]: Leaving directory '/build/reproducible-path/lefse-1.1.2' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild @@ -642,12 +678,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/47562/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/112263 and its subdirectories -I: Current time: Wed Dec 24 14:20:08 -12 2025 -I: pbuilder-time-stamp: 1766629208 +I: removing directory /srv/workspace/pbuilder/47562 and its subdirectories +I: Current time: Fri Nov 22 09:58:06 +14 2024 +I: pbuilder-time-stamp: 1732219086 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/lefse_1.1.2-1.diff: 82.0% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/lefse_1.1.2-1.diff.gz b2/build.log: 81.1% -- replaced with stdout Compressing the 1st log... b1/build.log: 81.7% -- replaced with stdout Thu Nov 21 19:58:08 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_lefse_trixie_i386_1732219088 + touch /var/log/reproducible-builds/diffoscope_stamp_lefse_trixie_i386_1732219088 + RESULT=0 + systemd-run '--description=diffoscope on lefse/1.1.2-1 in trixie/i386' --slice=rb-build-diffoscope.slice -u rb-diffoscope-i386_10-32260 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm --run-session -c jenkins-reproducible-trixie-diffoscope-521862ff-8db1-4a83-86c9-caeb0f1e556b -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/dbd-tmp-JX7Pgr6 ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/lefse_1.1.2-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/lefse_1.1.2-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/lefse_1.1.2-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1/lefse_1.1.2-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2/lefse_1.1.2-1_i386.changes' + false + set +x Running as unit: rb-diffoscope-i386_10-32260.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/lefse_1.1.2-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/lefse_1.1.2-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/lefse_1.1.2-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b1/lefse_1.1.2-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.SPhyj9nm/b2/lefse_1.1.2-1_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.362s) 0.362s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.017s) 0.017s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 697ms CPU time consumed: 698ms _ __ | | ___ / _|___ ___ | |/ _ \ |_/ __|/ _ \ | | __/ _\__ \ __/ |_|\___|_| |___/\___| Thu Nov 21 19:58:09 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Thu Nov 21 19:58:09 UTC 2024 I: lefse from trixie built successfully and reproducibly on i386. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-21 19:58:10] INFO: Starting at 2024-11-21 19:58:10.172540 [2024-11-21 19:58:10] INFO: Generating the pages of 1 package(s) [2024-11-21 19:58:10] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/i386/lefse didn't produce a buildlog, even though it has been built. [2024-11-21 19:58:10] INFO: Finished at 2024-11-21 19:58:10.614707, took: 0:00:00.442176 Thu Nov 21 19:58:10 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/i386/lefse.html Thu Nov 21 19:58:10 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Nov 21 19:58:10 UTC 2024 I: Submitting 8.0K b1/lefse_1.1.2-1_i386.buildinfo.asc https://buildinfo.debian.net/29a15bc4af830cd643b25d525f0680ca86d92419/lefse_1.1.2-1_all Thu Nov 21 19:58:12 UTC 2024 I: Submitting 8.0K b2/lefse_1.1.2-1_i386.buildinfo.asc https://buildinfo.debian.net/c959b9571239a929c7c9a8298add000a384f380c/lefse_1.1.2-1_all Thu Nov 21 19:58:13 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Nov 21 19:58:13 UTC 2024 I: Done submitting .buildinfo files. Thu Nov 21 19:58:13 UTC 2024 I: Removing signed lefse_1.1.2-1_i386.buildinfo.asc files: removed './b1/lefse_1.1.2-1_i386.buildinfo.asc' removed './b2/lefse_1.1.2-1_i386.buildinfo.asc' 1732219093 i386 trixie lefse Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/lefse_1.1.2-1.rbuild.log: 78.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/lefse_1.1.2-1.rbuild.log.gz [2024-11-21 19:58:13] INFO: Starting at 2024-11-21 19:58:13.438230 [2024-11-21 19:58:13] INFO: Generating the pages of 1 package(s) [2024-11-21 19:58:13] INFO: Finished at 2024-11-21 19:58:13.848898, took: 0:00:00.410675 All cleanup done. Thu Nov 21 19:58:13 UTC 2024 - total duration: 0h 1m 46s. Thu Nov 21 19:58:13 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-qM7JVO1c, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1min 50.053s CPU time consumed: 7.155s