Running as unit: rb-build-i386_10-32323.service ==================================================================================== Fri Nov 22 01:41:27 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_10) on jenkins, called using "ionos16-i386 ionos12-i386" as arguments. Fri Nov 22 01:41:27 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-qW3IEnXZ" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 01:41:27 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Fri Nov 22 01:41:27 UTC 2024 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-OBHn01' Fri Nov 22 01:41:28 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos12-i386.debian.net is marked as down. Fri Nov 22 01:41:28 UTC 2024 - checking via ssh if ionos12-i386.debian.net is up. removed '/tmp/read-only-fs-test-Otw4X7' ok, let's check if libghemical is building anywhere yet… ok, libghemical is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of libghemical in unstable on i386 on jenkins now. 1st build will be done on ionos16-i386.debian.net. 2nd build will be done on ionos12-i386.debian.net. ============================================================================= Fri Nov 22 01:41:39 UTC 2024 I: starting to build libghemical/unstable/i386 on jenkins on '2024-11-22 01:41' Fri Nov 22 01:41:39 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_10/32323/console.log 1732239699 i386 unstable libghemical Fri Nov 22 01:41:39 UTC 2024 I: Downloading source for unstable/libghemical=3.0.0-4.4 --2024-11-22 01:41:39-- http://deb.debian.org/debian/pool/main/libg/libghemical/libghemical_3.0.0-4.4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2314 (2.3K) [text/prs.lines.tag] Saving to: ‘libghemical_3.0.0-4.4.dsc’ 0K .. 100% 354M=0s 2024-11-22 01:41:39 (354 MB/s) - ‘libghemical_3.0.0-4.4.dsc’ saved [2314/2314] --2024-11-22 01:41:39-- http://deb.debian.org/debian/pool/main/libg/libghemical/libghemical_3.0.0-4.4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2314 (2.3K) [text/prs.lines.tag] Saving to: ‘libghemical_3.0.0-4.4.dsc’ 0K .. 100% 354M=0s 2024-11-22 01:41:39 (354 MB/s) - ‘libghemical_3.0.0-4.4.dsc’ saved [2314/2314] Fri Nov 22 01:41:39 UTC 2024 I: libghemical_3.0.0-4.4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libghemical Binary: libghemical-dev, libghemical5t64, libghemical-data Architecture: any all Version: 3.0.0-4.4 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: http://bioinformatics.org/ghemical/ghemical/ Standards-Version: 4.5.0 Vcs-Browser: https:https://salsa.debian.org/debichem-team/libghemical Vcs-Git: https://salsa.debian.org:/debichem-team/libghemical.git Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev Package-List: libghemical-data deb science optional arch=all libghemical-dev deb libdevel optional arch=any libghemical5t64 deb libs optional arch=any Checksums-Sha1: 330fd33968182ba383d0309e72a36f3c8bd02904 787947 libghemical_3.0.0.orig.tar.gz e4d47989f0b1c4a97ad5eb0b0507d988e40b5f4d 5424 libghemical_3.0.0-4.4.debian.tar.xz Checksums-Sha256: db8c3add0aa1f94c21016d60fa3f66fb194e56b8e9fceaa3860c603700efc3ac 787947 libghemical_3.0.0.orig.tar.gz 28a19e988ebf73a99a6092e74dbff5f49b70d742ed69045ea05e192797c617c8 5424 libghemical_3.0.0-4.4.debian.tar.xz Files: 1d5c9c19bb119470d2bb41a7e681eafd 787947 libghemical_3.0.0.orig.tar.gz b468f08e1ccbc59b8ea4bae43b65f136 5424 libghemical_3.0.0-4.4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEpi0s+9ULm1vzYNVLFZ61xO/Id0wFAmXfI/oACgkQFZ61xO/I d0yZcA/9F95dUdQuK385F4FJLpsoYBn9lR+Bh6Lphsf+LU8A7AUfWfnj2J7IelSo jmK2jtXOwbkLM+37nuz8q+1fkP6GOs9iuU41rZ5rP7PsApLs2XhRepKvnxDQFvSk kCXIoBV5D1kfhzDx90llkg3OLw1KGckpJunMNPQCk3jsXFANDWVdMJCBo99ZJem4 HfOvnSyUv9rBP4APzPN2Hu6fGduCdFArFQLczG3rKGkVyxuM1R2CAkCZcxBT6fMi OKUoau0gUZIRkRlHrVLLX6cJCyX+kQOy2BTAGtCOj6gHFidM9lQCCAnYk1NHt6DF gEON1j4agxeqgWXWUxFjqF6Ab6vRdE2TFX64rDacJEULqDDybWz1fp5KtLdAjoYw ftD61qQpVPQXDwQHJLh7jBKshNWnJbj6PWDrp3AhvEiZxOU4SC+gWvD0KKd/QriP iPQ01OpXl7wzpI9rQEewaxhPdbsGNV/Mf5PLU074R5YTfDFd8WLkWBsmFj451BIF TdZM8DwxcEN/4I8cT4G4wC83+LWe8URHcEDTjCTzLFxJ2wlkitVFrvJb0loVu6ri ZfrnKOSz1lFqz+40Ez5krpM2XgQOVSgMHvwUuOhckZJfkBp/+PFR5p0xVuR8F+LI ahOok5e+D2+tr0RcmRQ5q71+oqjqR/vZDJFAxuOQPOVF9bcg/IA= =G7an -----END PGP SIGNATURE----- Fri Nov 22 01:41:39 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 01:41:39 UTC 2024 I: Starting 1st build on remote node ionos16-i386.debian.net. Fri Nov 22 01:41:39 UTC 2024 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Fri Nov 22 01:41:40 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Fri Nov 22 01:41:40 UTC 2024 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-DwZvFg' ==================================================================================== Thu Dec 25 08:04:40 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos16-i386, called using "1 libghemical unstable /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU 3.0.0-4.4" as arguments. Thu Dec 25 08:04:40 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-Zg6CFt0O" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Dec 25 08:04:41 UTC 2025 I: Downloading source for unstable/libghemical=3.0.0-4.4 Reading package lists... NOTICE: 'libghemical' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org:/debichem-team/libghemical.git Please use: git clone https://salsa.debian.org:/debichem-team/libghemical.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 796 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libghemical 3.0.0-4.4 (dsc) [2314 B] Get:2 http://deb.debian.org/debian unstable/main libghemical 3.0.0-4.4 (tar) [788 kB] Get:3 http://deb.debian.org/debian unstable/main libghemical 3.0.0-4.4 (diff) [5424 B] Fetched 796 kB in 0s (12.0 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'libghemical' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org:/debichem-team/libghemical.git Please use: git clone https://salsa.debian.org:/debichem-team/libghemical.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 796 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main libghemical 3.0.0-4.4 (dsc) [2314 B] Get:2 http://deb.debian.org/debian unstable/main libghemical 3.0.0-4.4 (tar) [788 kB] Get:3 http://deb.debian.org/debian unstable/main libghemical 3.0.0-4.4 (diff) [5424 B] Fetched 796 kB in 0s (12.0 MB/s) Download complete and in download only mode ============================================================================= Building libghemical in unstable on i386 on ionos16-i386 now. Date: Thu Dec 25 09:04:41 CET 2025 Date UTC: Thu Dec 25 08:04:41 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 24 20:04:41 -12 2025 I: pbuilder-time-stamp: 1766649881 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libghemical_3.0.0-4.4.dsc] I: copying [./libghemical_3.0.0.orig.tar.gz] I: copying [./libghemical_3.0.0-4.4.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 28 12:15:54 2024 gpgv: using RSA key A62D2CFBD50B9B5BF360D54B159EB5C4EFC8774C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libghemical_3.0.0-4.4.dsc: no acceptable signature found dpkg-source: info: extracting libghemical in libghemical-3.0.0 dpkg-source: info: unpacking libghemical_3.0.0.orig.tar.gz dpkg-source: info: unpacking libghemical_3.0.0-4.4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-underlinking.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16679/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='7e630a97353b47689d324a04fa197449' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16679' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU/pbuilderrc_EPBH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU/b1 --logfile b1/build.log libghemical_3.0.0-4.4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/16679/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran | fortran-compiler; however: Package gfortran is not installed. Package fortran-compiler is not installed. pbuilder-satisfydepends-dummy depends on flex; however: Package flex is not installed. pbuilder-satisfydepends-dummy depends on intltool (>= 0.40.0); however: Package intltool is not installed. pbuilder-satisfydepends-dummy depends on pkg-config (>= 0.9.0); however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmopac7-dev (>= 1.14); however: Package libmopac7-dev is not installed. pbuilder-satisfydepends-dummy depends on libsc-dev (>= 2.3.1-2); however: Package libsc-dev is not installed. pbuilder-satisfydepends-dummy depends on mesa-common-dev; however: Package mesa-common-dev is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} flex{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} girepository-tools{a} groff-base{a} hwloc-nox{a} intltool{a} intltool-debian{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libblkid-dev{a} libclone-perl{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1t64{a} libencode-locale-perl{a} libexpat1{a} libffi-dev{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libgbm1{a} libgfortran-14-dev{a} libgfortran5{a} libgio-2.0-dev{a} libgio-2.0-dev-bin{a} libgirepository-2.0-0{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgssapi-krb5-2{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhwloc-dev{a} libhwloc15{a} libicu72{a} libint1{a} libio-html-perl{a} libio-socket-ssl-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libllvm19{a} libltdl-dev{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmopac7-1gf{a} libmopac7-dev{a} libmount-dev{a} libmpich-dev{a} libmpich12{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libpciaccess-dev{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpkgconf3{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libsc-data{a} libsc-dev{a} libsc7v5{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libslurm41t64{a} libsysprof-capture-4-dev{a} libtimedate-perl{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libvulkan1{a} libwayland-server0{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxml-parser-perl{a} libxml2{a} libxshmfence1{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} mesa-common-dev{a} mesa-libgallium{a} mpi-default-dev{a} mpich{a} native-architecture{a} netbase{a} openssl{a} perl-openssl-defaults{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-minimal{a} python3-packaging{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} uuid-dev{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libdata-dump-perl libfl-dev libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libhwloc-plugins libio-compress-brotli-perl libmail-sendmail-perl libmailtools-perl lynx mesa-vulkan-drivers shared-mime-info wget xdg-user-dirs 0 packages upgraded, 185 newly installed, 0 to remove and 0 not upgraded. Need to get 135 MB of archives. After unpacking 561 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 flex i386 2.6.4-8.2+b3 [412 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.12.7-1 [26.8 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 tzdata all 2024b-3 [255 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 14 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-5 [69.3 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.12.7-1 [9712 B] Get: 24 http://deb.debian.org/debian unstable/main i386 python3 i386 3.12.7-1 [27.8 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 openssl i386 3.3.2-2 [1387 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 autopoint all 0.22.5-2 [723 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-8 [517 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 47 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 debhelper all 13.20 [915 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-8 [735 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libgfortran-14-dev i386 14.2.0-8 [800 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 gfortran-14-i686-linux-gnu i386 14.2.0-8 [12.5 MB] Get: 58 http://deb.debian.org/debian unstable/main i386 gfortran-14 i386 14.2.0-8 [12.2 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 gfortran-i686-linux-gnu i386 4:14.2.0-1 [1280 B] Get: 60 http://deb.debian.org/debian unstable/main i386 gfortran i386 4:14.2.0-1 [1432 B] Get: 61 http://deb.debian.org/debian unstable/main i386 native-architecture all 0.2.3 [2108 B] Get: 62 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.82.2-3 [1571 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libgirepository-2.0-0 i386 2.82.2-3 [144 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 girepository-tools i386 2.82.2-3 [153 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libhwloc15 i386 2.11.2-1 [177 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 hwloc-nox i386 2.11.2-1 [229 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 liburi-perl all 5.30-1 [105 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libhtml-parser-perl i386 3.83-1+b1 [101 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libhtml-tree-perl all 5.07-3 [211 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libclone-perl i386 0.47-1+b1 [14.0 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libio-html-perl all 1.004-3 [16.2 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libhttp-message-perl all 7.00-2 [79.8 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 perl-openssl-defaults i386 7+b2 [6720 B] Get: 82 http://deb.debian.org/debian unstable/main i386 libnet-ssleay-perl i386 1.94-2 [340 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libnet-http-perl all 6.23-1 [23.9 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libwww-perl all 6.77-1 [183 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libxml-parser-perl i386 2.47-1+b3 [200 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 intltool all 0.51.0-6 [50.8 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.0-4 [143 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libblas-dev i386 3.12.0-4 [155 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 uuid-dev i386 2.40.2-11 [47.5 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libblkid-dev i386 2.40.2-11 [227 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libdrm-common all 2.4.123-1 [8084 B] Get: 96 http://deb.debian.org/debian unstable/main i386 libdrm2 i386 2.4.123-1 [41.8 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libdrm-amdgpu1 i386 2.4.123-1 [25.0 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libpciaccess0 i386 0.17-3+b2 [53.8 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libdrm-intel1 i386 2.4.123-1 [66.8 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libdrm-radeon1 i386 2.4.123-1 [23.0 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libdrm-nouveau2 i386 2.4.123-1 [21.1 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libpciaccess-dev i386 0.17-3+b2 [58.2 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libdrm-dev i386 2.4.123-1 [306 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20240808-1 [98.0 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libffi-dev i386 3.4.6-1 [57.8 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libwayland-server0 i386 1.23.0-1+b1 [35.9 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libxcb-randr0 i386 1.17.0-2+b1 [118 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libglapi-mesa i386 24.2.7-1 [38.6 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libllvm19 i386 1:19.1.3-2 [30.4 MB] Get: 114 http://deb.debian.org/debian unstable/main i386 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libsensors5 i386 1:3.6.0-10+b1 [35.8 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libx11-xcb1 i386 2:1.8.10-2 [241 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libxcb-dri2-0 i386 1.17.0-2+b1 [107 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libxcb-dri3-0 i386 1.17.0-2+b1 [107 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libxcb-present0 i386 1.17.0-2+b1 [106 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libxcb-sync1 i386 1.17.0-2+b1 [109 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libxcb-xfixes0 i386 1.17.0-2+b1 [110 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 libxshmfence1 i386 1.3-1+b2 [8992 B] Get: 125 http://deb.debian.org/debian unstable/main i386 mesa-libgallium i386 24.2.7-1 [9409 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libgbm1 i386 24.2.7-1 [43.9 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libsepol-dev i386 3.7-1 [405 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.44-4 [258 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libpcre2-32-0 i386 10.44-4 [246 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 libpcre2-posix3 i386 10.44-4 [60.4 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libpcre2-dev i386 10.44-4 [799 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libselinux1-dev i386 3.7-3+b1 [168 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libmount-dev i386 2.40.2-11 [29.0 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libsysprof-capture-4-dev i386 47.1-1 [52.1 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-4 [38.4 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-4 [30.6 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-4 [26.2 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libgio-2.0-dev i386 2.82.2-3 [1791 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libgio-2.0-dev-bin i386 2.82.2-3 [163 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libglvnd0 i386 1.7.0-1+b2 [44.1 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libxcb-glx0 i386 1.17.0-2+b1 [124 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b2 [52.6 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libxfixes3 i386 1:6.0.0-2+b2 [20.7 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libxxf86vm1 i386 1:1.1.4-1+b3 [20.1 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libvulkan1 i386 1.3.296.0-1 [136 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dri i386 24.2.7-1 [42.5 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libglx-mesa0 i386 24.2.7-1 [160 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libglx0 i386 1.7.0-1+b2 [36.8 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libgl1 i386 1.7.0-1+b2 [82.7 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libxau-dev i386 1:1.0.11-1 [24.0 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libxdmcp-dev i386 1:1.1.5-1 [45.0 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libxcb1-dev i386 1.17.0-2+b1 [186 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libx11-dev i386 2:1.8.10-2 [917 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libglx-dev i386 1.7.0-1+b2 [15.8 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libgl-dev i386 1.7.0-1+b2 [101 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libglib2.0-data all 2.82.2-3 [1275 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libglib2.0-bin i386 2.82.2-3 [130 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libglib2.0-dev-bin i386 2.82.2-3 [51.5 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libglib2.0-dev i386 2.82.2-3 [52.2 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 libnuma1 i386 2.0.18-1+b1 [23.9 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 libnuma-dev i386 2.0.18-1+b1 [38.8 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-8 [395 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libltdl-dev i386 2.4.7-8 [167 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 libhwloc-dev i386 2.11.2-1 [271 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 libint1 i386 1.2.1-6 [6255 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.0-4 [2194 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 liblapack-dev i386 3.12.0-4 [4452 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 libmopac7-1gf i386 1.15-7 [450 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 libmopac7-dev i386 1.15-7 [567 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 libmpich12 i386 4.2.0-14 [1518 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 libslurm41t64 i386 24.05.4-1 [739 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 mpich i386 4.2.0-14 [235 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 libmpich-dev i386 4.2.0-14 [2494 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 libsc-data all 2.3.1-22 [111 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 libsc7v5 i386 2.3.1-22+b2 [2226 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 mpi-default-dev i386 1.17 [3144 B] Get: 183 http://deb.debian.org/debian unstable/main i386 libsc-dev i386 2.3.1-22+b2 [291 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 mesa-common-dev i386 24.2.7-1 [2697 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-4 [14.0 kB] Fetched 135 MB in 2s (68.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../archives/m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package flex. Preparing to unpack .../flex_2.6.4-8.2+b3_i386.deb ... Unpacking flex (2.6.4-8.2+b3) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.7-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_i386.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:i386 (3.12.7-3) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20455 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_i386.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21517 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_i386.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-2_i386.deb ... Unpacking openssl (3.3.2-2) ... 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Setting up libwayland-server0:i386 (1.23.0-1+b1) ... Setting up libpciaccess0:i386 (0.17-3+b2) ... Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libkeyutils1:i386 (1.6.3-4) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up native-architecture (0.2.3) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up libpciaccess-dev:i386 (0.17-3+b2) ... Setting up libxcb-xfixes0:i386 (1.17.0-2+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:i386 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:i386 (1.7.0-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libxcb-glx0:i386 (1.17.0-2+b1) ... Setting up libdebhelper-perl (13.20) ... Setting up libedit2:i386 (3.1-20240808-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libsensors-config (1:3.6.0-10) ... Setting up perl-openssl-defaults:i386 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up libint1 (1.2.1-6) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libffi-dev:i386 (3.4.6-1) ... Setting up libpcre2-16-0:i386 (10.44-4) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Dec 25 08:05:09 UTC 2025. Universal Time is now: Thu Dec 25 08:05:09 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:i386 (1.17.0-2+b1) ... Setting up libsysprof-capture-4-dev:i386 (47.1-1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:i386 (4.13.3-1) ... Setting up libpcre2-32-0:i386 (10.44-4) ... Setting up libglib2.0-0t64:i386 (2.82.2-3) ... No schema files found: doing nothing. Setting up libblas3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libglib2.0-data (2.82.2-3) ... Setting up libpkgconf3:i386 (1.8.1-4) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libxcb-sync1:i386 (1.17.0-2+b1) ... Setting up uuid-dev:i386 (2.40.2-11) ... Setting up libhwloc15:i386 (2.11.2-1) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up libsc-data (2.3.1-22) ... Setting up libsepol-dev:i386 (3.7-1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:i386 (1:3.6.0-10+b1) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libltdl7:i386 (2.4.7-8) ... Setting up libglapi-mesa:i386 (24.2.7-1) ... Setting up libgfortran5:i386 (14.2.0-8) ... Setting up libvulkan1:i386 (1.3.296.0-1) ... Setting up autoconf (2.72-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libxcb-dri2-0:i386 (1.17.0-2+b1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libnuma1:i386 (2.0.18-1+b1) ... Setting up libpcre2-posix3:i386 (10.44-4) ... Setting up dwz (0.15-1+b1) ... Setting up libmpich12:i386 (4.2.0-14) ... Setting up sensible-utils (0.0.24) ... Setting up libxshmfence1:i386 (1.3-1+b2) ... Setting up libxcb-randr0:i386 (1.17.0-2+b1) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libx11-6:i386 (2:1.8.10-2) ... Setting up libslurm41t64 (24.05.4-1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libdrm-common (2.4.123-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up libblas-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libnet-ssleay-perl:i386 (1.94-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:i386 (14.2.0-8) ... Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:i386 (1.17.0-2+b1) ... Setting up libblkid-dev:i386 (2.40.2-11) ... Setting up libllvm19:i386 (1:19.1.3-2) ... Setting up libx11-xcb1:i386 (2:1.8.10-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up flex (2.6.4-8.2+b3) ... Setting up liblapack3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxau-dev:i386 (1:1.0.11-1) ... Setting up libpcre2-dev:i386 (10.44-4) ... Setting up libtool (2.4.7-8) ... Setting up libgirepository-2.0-0:i386 (2.82.2-3) ... Setting up libselinux1-dev:i386 (3.7-3+b1) ... Setting up hwloc-nox (2.11.2-1) ... Setting up libxext6:i386 (2:1.3.4-1+b2) ... Setting up libglib2.0-bin (2.82.2-3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libmopac7-1gf (1.15-7) ... Setting up pkgconf:i386 (1.8.1-4) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:i386 (2.0.18-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:i386 (2.4.7-8) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:i386 (1:1.1.5-1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b2) ... Setting up libsc7v5 (2.3.1-22+b2) ... Setting up liblapack-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up gfortran-14-i686-linux-gnu (14.2.0-8) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up pkg-config:i386 (1.8.1-4) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:i386 (2.4.123-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:i386 (3.83-1+b1) ... Setting up libhwloc-dev:i386 (2.11.2-1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libmount-dev:i386 (2.40.2-11) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libdrm-amdgpu1:i386 (2.4.123-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libdrm-nouveau2:i386 (2.4.123-1) ... Setting up libgio-2.0-dev:i386 (2.82.2-3) ... Setting up girepository-tools:i386 (2.82.2-3) ... Setting up libxcb1-dev:i386 (1.17.0-2+b1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libdrm-radeon1:i386 (2.4.123-1) ... Setting up mpich (4.2.0-14) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libmopac7-dev (1.15-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libdrm-intel1:i386 (2.4.123-1) ... Setting up libx11-dev:i386 (2:1.8.10-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-i686-linux-gnu (4:14.2.0-1) ... Setting up libmpich-dev:i386 (4.2.0-14) ... update-alternatives: using /usr/include/i386-linux-gnu/mpich to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up mpi-default-dev (1.17) ... Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up mesa-libgallium:i386 (24.2.7-1) ... Setting up libdrm-dev:i386 (2.4.123-1) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up libgbm1:i386 (24.2.7-1) ... Setting up python3.12 (3.12.7-3) ... Setting up libgl1-mesa-dri:i386 (24.2.7-1) ... Setting up debhelper (13.20) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libsc-dev (2.3.1-22+b2) ... Setting up libpython3-stdlib:i386 (3.12.7-1) ... Setting up libglx-mesa0:i386 (24.2.7-1) ... Setting up libglx0:i386 (1.7.0-1+b2) ... Setting up python3 (3.12.7-1) ... Setting up python3-packaging (24.2-1) ... Setting up libgl1:i386 (1.7.0-1+b2) ... Setting up libglx-dev:i386 (1.7.0-1+b2) ... Setting up libgl-dev:i386 (1.7.0-1+b2) ... Setting up libgio-2.0-dev-bin (2.82.2-3) ... Setting up mesa-common-dev:i386 (24.2.7-1) ... Setting up libglib2.0-dev-bin (2.82.2-3) ... Setting up libglib2.0-dev:i386 (2.82.2-3) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libxml-parser-perl (2.47-1+b3) ... Setting up intltool (0.51.0-6) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libghemical-3.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libghemical_3.0.0-4.4_source.changes dpkg-buildpackage: info: source package libghemical dpkg-buildpackage: info: source version 3.0.0-4.4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Benjamin Drung dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --parallel --with autoreconf dh_clean debian/rules build dh build --parallel --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10887: AM_CONFIG_HEADER is expanded from... configure.ac:26: the top level configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10887: AM_CONFIG_HEADER is expanded from... configure.ac:32: the top level configure.ac:91: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:91: You should run autoupdate. aclocal.m4:799: AC_PROG_LIBTOOL is expanded from... configure.ac:91: the top level configure.ac:105: warning: The macro 'GLIB_GNU_GETTEXT' is obsolete. configure.ac:105: You should run autoupdate. aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:690: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... aclocal.m4:73: GLIB_LC_MESSAGES is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:690: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_OUTPUT_COMMANDS' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:126: warning: The macro 'AC_TRY_RUN' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2995: AC_TRY_RUN is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:126: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:164: warning: The macro 'AC_PROG_CC_STDC' is obsolete. configure.ac:164: You should run autoupdate. ./lib/autoconf/c.m4:1669: AC_PROG_CC_STDC is expanded from... configure.ac:164: the top level configure.ac:176: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:176: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:176: the top level configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_configure -- --enable-mpqc --enable-mopac7 --disable-sctest ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpqc --enable-mopac7 --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/bash checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.40.0 checking for XML::Parser... ok checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lblas... yes checking for main in -llapack... yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for libmopac7 >= 1.13... yes Package mpi-cxx was not found in the pkg-config search path. Perhaps you should add the directory containing `mpi-cxx.pc' to the PKG_CONFIG_PATH environment variable Package 'mpi-cxx', required by 'virtual:world', not found Package mpi-cxx was not found in the pkg-config search path. Perhaps you should add the directory containing `mpi-cxx.pc' to the PKG_CONFIG_PATH environment variable Package 'mpi-cxx', required by 'virtual:world', not found checking for GL/gl.h... yes checking for inline... inline checking for an ANSI C-conforming const... yes checking for egrep... (cached) /usr/bin/grep -E configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_build make -j22 make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making all in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make all-am make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o atom.lo atom.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bond.lo bond.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o constraint.lo constraint.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o model.lo model.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o engine.lo engine.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o typerule.lo typerule.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utility.lo utility.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o chn_info.lo chn_info.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat 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-I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src 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-D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_ua.cpp -o eng1_sf_ua.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eng1_sf_cg.lo eng1_sf_cg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_cg.cpp -o eng1_sf_cg.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eng2_qm_mm.lo eng2_qm_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from /usr/include/sc/util/group/linkage.h:32, from /usr/include/sc/math/scmat/linkage.h:34, from /usr/include/sc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/sc/scconfig.h:281:9: warning: "PACKAGE_NAME" redefined 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:102:9: note: this is the location of the previous definition 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: warning: "PACKAGE_STRING" redefined 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:105:9: note: this is the location of the previous definition 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: warning: "PACKAGE_TARNAME" redefined 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:108:9: note: this is the location of the previous definition 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: warning: "PACKAGE_VERSION" redefined 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: note: this is the location of the previous definition 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ In file included from /usr/include/sc/util/group/linkage.h:57: /usr/include/sc/util/group/memmtmpi.h:38:10: fatal error: mpi.h: No such file or directory 38 | #include | ^~~~~~~ compilation terminated. make[3]: *** [Makefile:645: eng1_qm_mpqc.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()': eng1_qm_mopac.cpp:178:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 33 | element element::current_element = element("C"); | ^~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c constraint.cpp -o constraint.o >/dev/null 2>&1 In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 172 | i32s tmp1[2] = { strlen(buffer), 0 }; | ~~~~~~^~~~~~~~ utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; | ^~ utility.cpp:309:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 309 | i32s tmp2[2] = { n1, n2 + 4 }; | ^~ utility.cpp:349:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:349:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:352:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:352:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:355:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:355:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:358:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:358:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:361:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:361:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:364:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:364:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:367:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c bond.cpp -o bond.o >/dev/null 2>&1 utility.cpp:367:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:370:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c chn_info.cpp -o chn_info.o >/dev/null 2>&1 In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c atom.cpp -o atom.o >/dev/null 2>&1 In file included from eng2_qm_mm.h:28: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_qm_mopac.cpp -o eng1_qm_mopac.o >/dev/null 2>&1 eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm.cpp -o eng1_mm.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_qm.cpp -o eng1_qm.o >/dev/null 2>&1 typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 183 | newring[tmp1[1]] = 0; | ~~~~~~~~~~~~~~~~~^~~ typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new []' 182 | signed char * newring = new signed char[tmp1[1] + 1]; | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c utility.cpp -o utility.o >/dev/null 2>&1 model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c typerule.cpp -o typerule.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng2_qm_mm.cpp -o eng2_qm_mm.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c engine.cpp -o engine.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c mfinder.cpp -o mfinder.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_prmfit.cpp -o tab_mm_prmfit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_tripos52.cpp -o tab_mm_tripos52.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_prmfit.cpp -o eng1_mm_prmfit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_tripos52.cpp -o eng1_mm_tripos52.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_default.cpp -o eng1_mm_default.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c seqbuild.cpp -o seqbuild.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_default.cpp -o tab_mm_default.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c model.cpp -o model.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf.cpp -o eng1_sf.o >/dev/null 2>&1 make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' make[2]: *** [Makefile:485: all] Error 2 make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' make[1]: *** [Makefile:486: all-recursive] Error 1 make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_build: error: make -j22 returned exit code 2 make: *** [debian/rules:10: build] Error 25 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16679 and its subdirectories Starting cleanup. All cleanup done. Thu Dec 25 08:05:48 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Zg6CFt0O, removing. /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 01:42 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 01:41 b2 -rw-r--r-- 1 jenkins jenkins 2314 Feb 28 2024 libghemical_3.0.0-4.4.dsc -rw------- 1 jenkins jenkins 3453 Nov 22 01:41 rbuildlog.nVrUPGH /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU/b1: total 136 -rw-r--r-- 1 jenkins jenkins 138594 Nov 22 01:42 build.log /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU/b2: total 0 Fri Nov 22 01:42:49 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 24 20:04:41 -12 2025 I: pbuilder-time-stamp: 1766649881 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libghemical_3.0.0-4.4.dsc] I: copying [./libghemical_3.0.0.orig.tar.gz] I: copying [./libghemical_3.0.0-4.4.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 28 12:15:54 2024 gpgv: using RSA key A62D2CFBD50B9B5BF360D54B159EB5C4EFC8774C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libghemical_3.0.0-4.4.dsc: no acceptable signature found dpkg-source: info: extracting libghemical in libghemical-3.0.0 dpkg-source: info: unpacking libghemical_3.0.0.orig.tar.gz dpkg-source: info: unpacking libghemical_3.0.0-4.4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-underlinking.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16679/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='7e630a97353b47689d324a04fa197449' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16679' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU/pbuilderrc_EPBH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.uYPIHkeU/b1 --logfile b1/build.log libghemical_3.0.0-4.4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/16679/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran | fortran-compiler; however: Package gfortran is not installed. Package fortran-compiler is not installed. pbuilder-satisfydepends-dummy depends on flex; however: Package flex is not installed. pbuilder-satisfydepends-dummy depends on intltool (>= 0.40.0); however: Package intltool is not installed. pbuilder-satisfydepends-dummy depends on pkg-config (>= 0.9.0); however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmopac7-dev (>= 1.14); however: Package libmopac7-dev is not installed. pbuilder-satisfydepends-dummy depends on libsc-dev (>= 2.3.1-2); however: Package libsc-dev is not installed. pbuilder-satisfydepends-dummy depends on mesa-common-dev; however: Package mesa-common-dev is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} flex{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} girepository-tools{a} groff-base{a} hwloc-nox{a} intltool{a} intltool-debian{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libblkid-dev{a} libclone-perl{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1t64{a} libencode-locale-perl{a} libexpat1{a} libffi-dev{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libgbm1{a} libgfortran-14-dev{a} libgfortran5{a} libgio-2.0-dev{a} libgio-2.0-dev-bin{a} libgirepository-2.0-0{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgssapi-krb5-2{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhwloc-dev{a} libhwloc15{a} libicu72{a} libint1{a} libio-html-perl{a} libio-socket-ssl-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libllvm19{a} libltdl-dev{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmopac7-1gf{a} libmopac7-dev{a} libmount-dev{a} libmpich-dev{a} libmpich12{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libpciaccess-dev{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpkgconf3{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libsc-data{a} libsc-dev{a} libsc7v5{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libslurm41t64{a} libsysprof-capture-4-dev{a} libtimedate-perl{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libvulkan1{a} libwayland-server0{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxml-parser-perl{a} libxml2{a} libxshmfence1{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} mesa-common-dev{a} mesa-libgallium{a} mpi-default-dev{a} mpich{a} native-architecture{a} netbase{a} openssl{a} perl-openssl-defaults{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-minimal{a} python3-packaging{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} uuid-dev{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libdata-dump-perl libfl-dev libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libhwloc-plugins libio-compress-brotli-perl libmail-sendmail-perl libmailtools-perl lynx mesa-vulkan-drivers shared-mime-info wget xdg-user-dirs 0 packages upgraded, 185 newly installed, 0 to remove and 0 not upgraded. Need to get 135 MB of archives. After unpacking 561 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 flex i386 2.6.4-8.2+b3 [412 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.12.7-1 [26.8 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 tzdata all 2024b-3 [255 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 14 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-5 [69.3 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.12.7-1 [9712 B] Get: 24 http://deb.debian.org/debian unstable/main i386 python3 i386 3.12.7-1 [27.8 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 openssl i386 3.3.2-2 [1387 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 autopoint all 0.22.5-2 [723 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-8 [517 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 47 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 debhelper all 13.20 [915 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-8 [735 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libgfortran-14-dev i386 14.2.0-8 [800 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 gfortran-14-i686-linux-gnu i386 14.2.0-8 [12.5 MB] Get: 58 http://deb.debian.org/debian unstable/main i386 gfortran-14 i386 14.2.0-8 [12.2 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 gfortran-i686-linux-gnu i386 4:14.2.0-1 [1280 B] Get: 60 http://deb.debian.org/debian unstable/main i386 gfortran i386 4:14.2.0-1 [1432 B] Get: 61 http://deb.debian.org/debian unstable/main i386 native-architecture all 0.2.3 [2108 B] Get: 62 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.82.2-3 [1571 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libgirepository-2.0-0 i386 2.82.2-3 [144 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 girepository-tools i386 2.82.2-3 [153 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libhwloc15 i386 2.11.2-1 [177 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 hwloc-nox i386 2.11.2-1 [229 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 liburi-perl all 5.30-1 [105 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libhtml-parser-perl i386 3.83-1+b1 [101 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libhtml-tree-perl all 5.07-3 [211 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libclone-perl i386 0.47-1+b1 [14.0 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libio-html-perl all 1.004-3 [16.2 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libhttp-message-perl all 7.00-2 [79.8 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 perl-openssl-defaults i386 7+b2 [6720 B] Get: 82 http://deb.debian.org/debian unstable/main i386 libnet-ssleay-perl i386 1.94-2 [340 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libnet-http-perl all 6.23-1 [23.9 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libwww-perl all 6.77-1 [183 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libxml-parser-perl i386 2.47-1+b3 [200 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 intltool all 0.51.0-6 [50.8 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.0-4 [143 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libblas-dev i386 3.12.0-4 [155 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 uuid-dev i386 2.40.2-11 [47.5 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libblkid-dev i386 2.40.2-11 [227 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libdrm-common all 2.4.123-1 [8084 B] Get: 96 http://deb.debian.org/debian unstable/main i386 libdrm2 i386 2.4.123-1 [41.8 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libdrm-amdgpu1 i386 2.4.123-1 [25.0 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libpciaccess0 i386 0.17-3+b2 [53.8 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libdrm-intel1 i386 2.4.123-1 [66.8 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libdrm-radeon1 i386 2.4.123-1 [23.0 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libdrm-nouveau2 i386 2.4.123-1 [21.1 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libpciaccess-dev i386 0.17-3+b2 [58.2 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libdrm-dev i386 2.4.123-1 [306 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20240808-1 [98.0 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libffi-dev i386 3.4.6-1 [57.8 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libwayland-server0 i386 1.23.0-1+b1 [35.9 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libxcb-randr0 i386 1.17.0-2+b1 [118 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libglapi-mesa i386 24.2.7-1 [38.6 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libllvm19 i386 1:19.1.3-2 [30.4 MB] Get: 114 http://deb.debian.org/debian unstable/main i386 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libsensors5 i386 1:3.6.0-10+b1 [35.8 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libx11-xcb1 i386 2:1.8.10-2 [241 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libxcb-dri2-0 i386 1.17.0-2+b1 [107 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libxcb-dri3-0 i386 1.17.0-2+b1 [107 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libxcb-present0 i386 1.17.0-2+b1 [106 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libxcb-sync1 i386 1.17.0-2+b1 [109 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libxcb-xfixes0 i386 1.17.0-2+b1 [110 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 libxshmfence1 i386 1.3-1+b2 [8992 B] Get: 125 http://deb.debian.org/debian unstable/main i386 mesa-libgallium i386 24.2.7-1 [9409 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libgbm1 i386 24.2.7-1 [43.9 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libsepol-dev i386 3.7-1 [405 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.44-4 [258 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libpcre2-32-0 i386 10.44-4 [246 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 libpcre2-posix3 i386 10.44-4 [60.4 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libpcre2-dev i386 10.44-4 [799 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libselinux1-dev i386 3.7-3+b1 [168 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libmount-dev i386 2.40.2-11 [29.0 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libsysprof-capture-4-dev i386 47.1-1 [52.1 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-4 [38.4 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-4 [30.6 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-4 [26.2 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libgio-2.0-dev i386 2.82.2-3 [1791 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libgio-2.0-dev-bin i386 2.82.2-3 [163 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libglvnd0 i386 1.7.0-1+b2 [44.1 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libxcb-glx0 i386 1.17.0-2+b1 [124 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b2 [52.6 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libxfixes3 i386 1:6.0.0-2+b2 [20.7 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libxxf86vm1 i386 1:1.1.4-1+b3 [20.1 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libvulkan1 i386 1.3.296.0-1 [136 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dri i386 24.2.7-1 [42.5 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libglx-mesa0 i386 24.2.7-1 [160 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libglx0 i386 1.7.0-1+b2 [36.8 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 libgl1 i386 1.7.0-1+b2 [82.7 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libxau-dev i386 1:1.0.11-1 [24.0 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libxdmcp-dev i386 1:1.1.5-1 [45.0 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libxcb1-dev i386 1.17.0-2+b1 [186 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 libx11-dev i386 2:1.8.10-2 [917 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libglx-dev i386 1.7.0-1+b2 [15.8 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libgl-dev i386 1.7.0-1+b2 [101 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libglib2.0-data all 2.82.2-3 [1275 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 libglib2.0-bin i386 2.82.2-3 [130 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libglib2.0-dev-bin i386 2.82.2-3 [51.5 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 libglib2.0-dev i386 2.82.2-3 [52.2 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 libnuma1 i386 2.0.18-1+b1 [23.9 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 libnuma-dev i386 2.0.18-1+b1 [38.8 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-8 [395 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libltdl-dev i386 2.4.7-8 [167 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 libhwloc-dev i386 2.11.2-1 [271 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 libint1 i386 1.2.1-6 [6255 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.0-4 [2194 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 liblapack-dev i386 3.12.0-4 [4452 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 libmopac7-1gf i386 1.15-7 [450 kB] Get: 175 http://deb.debian.org/debian unstable/main i386 libmopac7-dev i386 1.15-7 [567 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 libmpich12 i386 4.2.0-14 [1518 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 libslurm41t64 i386 24.05.4-1 [739 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 mpich i386 4.2.0-14 [235 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 libmpich-dev i386 4.2.0-14 [2494 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 libsc-data all 2.3.1-22 [111 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 libsc7v5 i386 2.3.1-22+b2 [2226 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 mpi-default-dev i386 1.17 [3144 B] Get: 183 http://deb.debian.org/debian unstable/main i386 libsc-dev i386 2.3.1-22+b2 [291 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 mesa-common-dev i386 24.2.7-1 [2697 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-4 [14.0 kB] Fetched 135 MB in 2s (68.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../archives/m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package flex. Preparing to unpack .../flex_2.6.4-8.2+b3_i386.deb ... Unpacking flex (2.6.4-8.2+b3) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.7-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.4-1_i386.deb ... Unpacking libexpat1:i386 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_i386.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:i386 (3.12.7-3) ... Setting up libexpat1:i386 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20455 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_i386.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.7-3) ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21517 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_i386.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-2_i386.deb ... Unpacking openssl (3.3.2-2) ... 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Setting up libwayland-server0:i386 (1.23.0-1+b1) ... Setting up libpciaccess0:i386 (0.17-3+b2) ... Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libkeyutils1:i386 (1.6.3-4) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up native-architecture (0.2.3) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up libpciaccess-dev:i386 (0.17-3+b2) ... Setting up libxcb-xfixes0:i386 (1.17.0-2+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libclone-perl:i386 (0.47-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:i386 (1.7.0-1+b2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libxcb-glx0:i386 (1.17.0-2+b1) ... Setting up libdebhelper-perl (13.20) ... Setting up libedit2:i386 (3.1-20240808-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libsensors-config (1:3.6.0-10) ... Setting up perl-openssl-defaults:i386 (7+b2) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up libint1 (1.2.1-6) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libffi-dev:i386 (3.4.6-1) ... Setting up libpcre2-16-0:i386 (10.44-4) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Dec 25 08:05:09 UTC 2025. Universal Time is now: Thu Dec 25 08:05:09 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:i386 (1.17.0-2+b1) ... Setting up libsysprof-capture-4-dev:i386 (47.1-1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:i386 (4.13.3-1) ... Setting up libpcre2-32-0:i386 (10.44-4) ... Setting up libglib2.0-0t64:i386 (2.82.2-3) ... No schema files found: doing nothing. Setting up libblas3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libglib2.0-data (2.82.2-3) ... Setting up libpkgconf3:i386 (1.8.1-4) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libxcb-sync1:i386 (1.17.0-2+b1) ... Setting up uuid-dev:i386 (2.40.2-11) ... Setting up libhwloc15:i386 (2.11.2-1) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.22.5-2) ... Setting up libsc-data (2.3.1-22) ... Setting up libsepol-dev:i386 (3.7-1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:i386 (1:3.6.0-10+b1) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libltdl7:i386 (2.4.7-8) ... Setting up libglapi-mesa:i386 (24.2.7-1) ... Setting up libgfortran5:i386 (14.2.0-8) ... Setting up libvulkan1:i386 (1.3.296.0-1) ... Setting up autoconf (2.72-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libxcb-dri2-0:i386 (1.17.0-2+b1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libnuma1:i386 (2.0.18-1+b1) ... Setting up libpcre2-posix3:i386 (10.44-4) ... Setting up dwz (0.15-1+b1) ... Setting up libmpich12:i386 (4.2.0-14) ... Setting up sensible-utils (0.0.24) ... Setting up libxshmfence1:i386 (1.3-1+b2) ... Setting up libxcb-randr0:i386 (1.17.0-2+b1) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libx11-6:i386 (2:1.8.10-2) ... Setting up libslurm41t64 (24.05.4-1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libdrm-common (2.4.123-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liburi-perl (5.30-1) ... Setting up libblas-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libnet-ssleay-perl:i386 (1.94-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:i386 (14.2.0-8) ... Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:i386 (1.17.0-2+b1) ... Setting up libblkid-dev:i386 (2.40.2-11) ... Setting up libllvm19:i386 (1:19.1.3-2) ... Setting up libx11-xcb1:i386 (2:1.8.10-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up flex (2.6.4-8.2+b3) ... Setting up liblapack3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxau-dev:i386 (1:1.0.11-1) ... Setting up libpcre2-dev:i386 (10.44-4) ... Setting up libtool (2.4.7-8) ... Setting up libgirepository-2.0-0:i386 (2.82.2-3) ... Setting up libselinux1-dev:i386 (3.7-3+b1) ... Setting up hwloc-nox (2.11.2-1) ... Setting up libxext6:i386 (2:1.3.4-1+b2) ... Setting up libglib2.0-bin (2.82.2-3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libmopac7-1gf (1.15-7) ... Setting up pkgconf:i386 (1.8.1-4) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:i386 (2.0.18-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:i386 (2.4.7-8) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:i386 (1:1.1.5-1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b2) ... Setting up libsc7v5 (2.3.1-22+b2) ... Setting up liblapack-dev:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up gfortran-14-i686-linux-gnu (14.2.0-8) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up pkg-config:i386 (1.8.1-4) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:i386 (2.4.123-1) ... Setting up groff-base (1.23.0-5) ... Setting up libhtml-parser-perl:i386 (3.83-1+b1) ... Setting up libhwloc-dev:i386 (2.11.2-1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libmount-dev:i386 (2.40.2-11) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libdrm-amdgpu1:i386 (2.4.123-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libdrm-nouveau2:i386 (2.4.123-1) ... Setting up libgio-2.0-dev:i386 (2.82.2-3) ... Setting up girepository-tools:i386 (2.82.2-3) ... Setting up libxcb1-dev:i386 (1.17.0-2+b1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libdrm-radeon1:i386 (2.4.123-1) ... Setting up mpich (4.2.0-14) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libmopac7-dev (1.15-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libdrm-intel1:i386 (2.4.123-1) ... Setting up libx11-dev:i386 (2:1.8.10-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-i686-linux-gnu (4:14.2.0-1) ... Setting up libmpich-dev:i386 (4.2.0-14) ... update-alternatives: using /usr/include/i386-linux-gnu/mpich to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up mpi-default-dev (1.17) ... Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up mesa-libgallium:i386 (24.2.7-1) ... Setting up libdrm-dev:i386 (2.4.123-1) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up libgbm1:i386 (24.2.7-1) ... Setting up python3.12 (3.12.7-3) ... Setting up libgl1-mesa-dri:i386 (24.2.7-1) ... Setting up debhelper (13.20) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libsc-dev (2.3.1-22+b2) ... Setting up libpython3-stdlib:i386 (3.12.7-1) ... Setting up libglx-mesa0:i386 (24.2.7-1) ... Setting up libglx0:i386 (1.7.0-1+b2) ... Setting up python3 (3.12.7-1) ... Setting up python3-packaging (24.2-1) ... Setting up libgl1:i386 (1.7.0-1+b2) ... Setting up libglx-dev:i386 (1.7.0-1+b2) ... Setting up libgl-dev:i386 (1.7.0-1+b2) ... Setting up libgio-2.0-dev-bin (2.82.2-3) ... Setting up mesa-common-dev:i386 (24.2.7-1) ... Setting up libglib2.0-dev-bin (2.82.2-3) ... Setting up libglib2.0-dev:i386 (2.82.2-3) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libxml-parser-perl (2.47-1+b3) ... Setting up intltool (0.51.0-6) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libghemical-3.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libghemical_3.0.0-4.4_source.changes dpkg-buildpackage: info: source package libghemical dpkg-buildpackage: info: source version 3.0.0-4.4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Benjamin Drung dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --parallel --with autoreconf dh_clean debian/rules build dh build --parallel --with autoreconf dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10887: AM_CONFIG_HEADER is expanded from... configure.ac:26: the top level configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10887: AM_CONFIG_HEADER is expanded from... configure.ac:32: the top level configure.ac:91: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:91: You should run autoupdate. aclocal.m4:799: AC_PROG_LIBTOOL is expanded from... configure.ac:91: the top level configure.ac:105: warning: The macro 'GLIB_GNU_GETTEXT' is obsolete. configure.ac:105: You should run autoupdate. aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:690: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... aclocal.m4:73: GLIB_LC_MESSAGES is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:690: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:697: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro 'AC_OUTPUT_COMMANDS' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:126: warning: The macro 'AC_TRY_RUN' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2995: AC_TRY_RUN is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:126: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:164: warning: The macro 'AC_PROG_CC_STDC' is obsolete. configure.ac:164: You should run autoupdate. ./lib/autoconf/c.m4:1669: AC_PROG_CC_STDC is expanded from... configure.ac:164: the top level configure.ac:176: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:176: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:176: the top level configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_configure -- --enable-mpqc --enable-mopac7 --disable-sctest ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpqc --enable-mopac7 --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/bash checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.40.0 checking for XML::Parser... ok checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lblas... yes checking for main in -llapack... yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for libmopac7 >= 1.13... yes Package mpi-cxx was not found in the pkg-config search path. Perhaps you should add the directory containing `mpi-cxx.pc' to the PKG_CONFIG_PATH environment variable Package 'mpi-cxx', required by 'virtual:world', not found Package mpi-cxx was not found in the pkg-config search path. Perhaps you should add the directory containing `mpi-cxx.pc' to the PKG_CONFIG_PATH environment variable Package 'mpi-cxx', required by 'virtual:world', not found checking for GL/gl.h... yes checking for inline... inline checking for an ANSI C-conforming const... yes checking for egrep... (cached) /usr/bin/grep -E configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_build make -j22 make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making all in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make all-am make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o atom.lo atom.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o bond.lo bond.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o constraint.lo constraint.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o model.lo model.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o engine.lo engine.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o typerule.lo typerule.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utility.lo utility.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o chn_info.lo chn_info.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o seqbuild.lo seqbuild.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mfinder.lo mfinder.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eng1_qm.lo eng1_qm.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 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--tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 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-I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_tripos52.cpp -fPIC -DPIC -o .libs/eng1_mm_tripos52.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_qm_mopac.cpp -fPIC -DPIC -o .libs/eng1_qm_mopac.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_default.cpp -fPIC -DPIC -o .libs/eng1_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_prmfit.cpp -fPIC -DPIC -o .libs/eng1_mm_prmfit.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_ua.cpp -o eng1_sf_ua.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eng1_sf_cg.lo eng1_sf_cg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf_cg.cpp -o eng1_sf_cg.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eng2_qm_mm.lo eng2_qm_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from /usr/include/sc/util/group/linkage.h:32, from /usr/include/sc/math/scmat/linkage.h:34, from /usr/include/sc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/sc/scconfig.h:281:9: warning: "PACKAGE_NAME" redefined 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:102:9: note: this is the location of the previous definition 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: warning: "PACKAGE_STRING" redefined 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:105:9: note: this is the location of the previous definition 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: warning: "PACKAGE_TARNAME" redefined 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:108:9: note: this is the location of the previous definition 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: warning: "PACKAGE_VERSION" redefined 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: note: this is the location of the previous definition 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ In file included from /usr/include/sc/util/group/linkage.h:57: /usr/include/sc/util/group/memmtmpi.h:38:10: fatal error: mpi.h: No such file or directory 38 | #include | ^~~~~~~ compilation terminated. make[3]: *** [Makefile:645: eng1_qm_mpqc.lo] Error 1 make[3]: *** Waiting for unfinished jobs.... In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | ^~~~~~~~~~~~ In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/sc/scconfig.h:281:9: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | ^~~~~~~~~~~~ libghemicalconfig.h:105:9: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | ^~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:284:9: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | ^~~~~~~~~~~~~~ libghemicalconfig.h:108:9: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:287:9: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | ^~~~~~~~~~~~~~~ libghemicalconfig.h:114:9: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | ^~~~~~~~~~~~~~~ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()': eng1_qm_mopac.cpp:178:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 33 | element element::current_element = element("C"); | ^~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c constraint.cpp -o constraint.o >/dev/null 2>&1 In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 172 | i32s tmp1[2] = { strlen(buffer), 0 }; | ~~~~~~^~~~~~~~ utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; | ^~ utility.cpp:309:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 309 | i32s tmp2[2] = { n1, n2 + 4 }; | ^~ utility.cpp:349:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:349:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:352:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:352:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:355:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:355:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:358:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:358:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:361:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:361:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:364:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:364:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:367:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c bond.cpp -o bond.o >/dev/null 2>&1 utility.cpp:367:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:370:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c chn_info.cpp -o chn_info.o >/dev/null 2>&1 In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c atom.cpp -o atom.o >/dev/null 2>&1 In file included from eng2_qm_mm.h:28: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_qm_mopac.cpp -o eng1_qm_mopac.o >/dev/null 2>&1 eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm.cpp -o eng1_mm.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_qm.cpp -o eng1_qm.o >/dev/null 2>&1 typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 183 | newring[tmp1[1]] = 0; | ~~~~~~~~~~~~~~~~~^~~ typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new []' 182 | signed char * newring = new signed char[tmp1[1] + 1]; | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c utility.cpp -o utility.o >/dev/null 2>&1 model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c typerule.cpp -o typerule.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng2_qm_mm.cpp -o eng2_qm_mm.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c engine.cpp -o engine.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c mfinder.cpp -o mfinder.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_prmfit.cpp -o tab_mm_prmfit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_tripos52.cpp -o tab_mm_tripos52.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_prmfit.cpp -o eng1_mm_prmfit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_tripos52.cpp -o eng1_mm_tripos52.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_mm_default.cpp -o eng1_mm_default.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c seqbuild.cpp -o seqbuild.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c tab_mm_default.cpp -o tab_mm_default.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c model.cpp -o model.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -c eng1_sf.cpp -o eng1_sf.o >/dev/null 2>&1 make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' make[2]: *** [Makefile:485: all] Error 2 make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' make[1]: *** [Makefile:486: all-recursive] Error 1 make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_build: error: make -j22 returned exit code 2 make: *** [debian/rules:10: build] Error 25 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16679 and its subdirectories libghemical failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/libghemical_3.0.0-4.4.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/libghemical_3.0.0-4.4.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/libghemical_3.0.0-4.4.build1.log.gz' Fri Nov 22 01:42:50 UTC 2024 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 86.5% -- replaced with stdout INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-22 01:42:51] INFO: Starting at 2024-11-22 01:42:51.170293 [2024-11-22 01:42:51] INFO: Generating the pages of 1 package(s) [2024-11-22 01:42:51] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/libghemical_3.0.0-4.4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/libghemical_3.0.0-4.4.diff.gz is missing [2024-11-22 01:42:51] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/libghemical_3.0.0-4.4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/libghemical_3.0.0-4.4.diff.gz is missing [2024-11-22 01:42:51] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/i386/libghemical didn't produce a buildlog, even though it has been built. [2024-11-22 01:42:51] INFO: Finished at 2024-11-22 01:42:51.630526, took: 0:00:00.460239 Fri Nov 22 01:42:51 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/i386/libghemical.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/libghemical_3.0.0-4.4.rbuild.log: 85.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/libghemical_3.0.0-4.4.rbuild.log.gz [2024-11-22 01:42:52] INFO: Starting at 2024-11-22 01:42:52.012781 [2024-11-22 01:42:52] INFO: Generating the pages of 1 package(s) [2024-11-22 01:42:52] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/amd64/libghemical_3.0.0-4.4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/amd64/libghemical_3.0.0-4.4.diff.gz is missing [2024-11-22 01:42:52] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/arm64/libghemical_3.0.0-4.4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/arm64/libghemical_3.0.0-4.4.diff.gz is missing [2024-11-22 01:42:52] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/libghemical_3.0.0-4.4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/libghemical_3.0.0-4.4.diff.gz is missing [2024-11-22 01:42:52] INFO: Finished at 2024-11-22 01:42:52.468263, took: 0:00:00.455488 All cleanup done. Fri Nov 22 01:42:52 UTC 2024 - total duration: 0h 1m 23s. Fri Nov 22 01:42:52 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-qW3IEnXZ, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1min 25.133s CPU time consumed: 5.051s