Running as unit: rb-build-i386_10-49621.service ==================================================================================== Wed Apr 2 12:47:26 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_10) on jenkins, called using "ionos16-i386 ionos2-i386" as arguments. Wed Apr 2 12:47:26 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-g5sRR3A1" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Apr 2 12:47:26 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Wed Apr 2 12:47:26 UTC 2025 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-6AAzcQ' Wed Apr 2 12:47:26 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Wed Apr 2 12:47:26 UTC 2025 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-Lxt5qq' ok, let's check if librostlab is building anywhere yet… ok, librostlab is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of librostlab in unstable on i386 on jenkins now. 1st build will be done on ionos16-i386.debian.net. 2nd build will be done on ionos2-i386.debian.net. ============================================================================= Wed Apr 2 12:47:31 UTC 2025 I: starting to build librostlab/unstable/i386 on jenkins on '2025-04-02 12:47' Wed Apr 2 12:47:31 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_10/49621/console.log 1743598051 i386 unstable librostlab Wed Apr 2 12:47:31 UTC 2025 I: Downloading source for unstable/librostlab=1.0.20-14 --2025-04-02 12:47:31-- http://deb.debian.org/debian/pool/main/libr/librostlab/librostlab_1.0.20-14.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2434 (2.4K) [text/prs.lines.tag] Saving to: ‘librostlab_1.0.20-14.dsc’ 0K .. 100% 407M=0s 2025-04-02 12:47:31 (407 MB/s) - ‘librostlab_1.0.20-14.dsc’ saved [2434/2434] --2025-04-02 12:47:31-- http://deb.debian.org/debian/pool/main/libr/librostlab/librostlab_1.0.20-14.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2434 (2.4K) [text/prs.lines.tag] Saving to: ‘librostlab_1.0.20-14.dsc’ 0K .. 100% 407M=0s 2025-04-02 12:47:31 (407 MB/s) - ‘librostlab_1.0.20-14.dsc’ saved [2434/2434] Wed Apr 2 12:47:32 UTC 2025 I: librostlab_1.0.20-14.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: librostlab Binary: librostlab3t64, librostlab3-dev, librostlab-doc Architecture: any all Version: 1.0.20-14 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: https://rostlab.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/librostlab Vcs-Git: https://salsa.debian.org/med-team/librostlab.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper-compat (= 13), dh-linktree Build-Depends-Arch: dpkg-dev (>= 1.22.5), d-shlibs (>= 0.106~) Build-Depends-Indep: doxygen, graphviz, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, texlive-plain-generic, sphinx-common, python3-sphinxcontrib.jquery Package-List: librostlab-doc deb doc optional arch=all librostlab3-dev deb libdevel optional arch=any librostlab3t64 deb libs optional arch=any Checksums-Sha1: 03efd8b5399a0553bb834077f3bc214b22c7233b 354367 librostlab_1.0.20.orig.tar.gz ff0bbc0ee3a4f7e4e58240a7d83b0ccc1813a40c 6144 librostlab_1.0.20-14.debian.tar.xz Checksums-Sha256: db4295b8add574016048597216dc7d1fa95a719377b5ce962e39278198935efa 354367 librostlab_1.0.20.orig.tar.gz e659292e13e53480898df5b8d60f79dda24baf6f6e2fd42e2c1e8e91b92910f6 6144 librostlab_1.0.20-14.debian.tar.xz Files: 3a3bfdba83ade5cede3f0d4197f41f1f 354367 librostlab_1.0.20.orig.tar.gz 334eeeb4bb3deeba644cba95d0f8681a 6144 librostlab_1.0.20-14.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmdrHXQOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtEixA//eto2iXJdVXWSoEVDale6uUjKXoHUSQoUolsU VZCMlRazamB2PnY8dJTNTWI1fSX3A292FXQuUzHPlhd3b2gq69zEHLcMSPF66eMp kIZkRCw6WGVmQqT0OitdcuILQ+wITNCAOaLKejF8h7rux7TR+bNGr0/cnWc1ZV46 imjovGZLuSvqe1WzdQmO+JtKMxA+86gUlw68vqWuDC2QIqcWvZD1ZchXCf3jJmLS MssbxR/tqC83x1aED5ld25RJl7VyvZHi9i0HQPXWGEhTpPdqzrRMDH1q3woIDij+ rhwsR2ikDBK89SsxSuTeUFgerUzNH71+cyjIRuV+8nwW8L0z9OLimKjlcphrHwvl Oz7FA1xHcrKITtDs5JiV0TIinWON/K27beL+UvgtROQ8uv1zUNIEdOt7Ngvn2aDR 6ZMQ1uPWKxgy/sxKoxx9xROA34eX0Y0hesLrVQQpqI0Rh18wRtmiMUmg6EQsDg0l xbo3acDhiM7/Ee4ILOusjbpGYk6BKVLkrxwZvIfPpiEt/KAd3ue2xGqpc9O/lJcH Vk+i4IHuFkxM+KvIjIq/r4t9d2x9NgRxLkPVTdnHAn9XXJb3NsHncBfAgIxQjLLJ JbkuzCm3O0JP630zRUzzCOPY53pVysfzwcOEDnql+FaW4vOf3D+B1f8YNBFX+/nd 1xOrhXY= =hbzn -----END PGP SIGNATURE----- Wed Apr 2 12:47:32 UTC 2025 I: Checking whether the package is not for us Wed Apr 2 12:47:32 UTC 2025 I: Starting 1st build on remote node ionos16-i386.debian.net. Wed Apr 2 12:47:32 UTC 2025 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Wed Apr 2 12:47:32 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Wed Apr 2 12:47:32 UTC 2025 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-cWI1Z2' ==================================================================================== Tue May 5 19:10:31 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos16-i386, called using "1 librostlab unstable /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S 1.0.20-14" as arguments. Tue May 5 19:10:31 UTC 2026 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-4aqPwSXa" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Tue May 5 19:10:31 UTC 2026 I: Downloading source for unstable/librostlab=1.0.20-14 Reading package lists... NOTICE: 'librostlab' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/librostlab.git Please use: git clone https://salsa.debian.org/med-team/librostlab.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 363 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (tar) [354 kB] Get:3 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (diff) [6144 B] Fetched 363 kB in 0s (5210 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'librostlab' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/librostlab.git Please use: git clone https://salsa.debian.org/med-team/librostlab.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 363 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (tar) [354 kB] Get:3 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (diff) [6144 B] Fetched 363 kB in 0s (5210 kB/s) Download complete and in download only mode ============================================================================= Building librostlab in unstable on i386 on ionos16-i386 now. Date: Tue May 5 21:10:31 CEST 2026 Date UTC: Tue May 5 19:10:31 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Tue May 5 07:10:32 -12 2026 I: pbuilder-time-stamp: 1778008232 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [librostlab_1.0.20-14.dsc] I: copying [./librostlab_1.0.20.orig.tar.gz] I: copying [./librostlab_1.0.20-14.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./librostlab_1.0.20-14.dsc: unsupported subcommand dpkg-source: info: extracting librostlab in librostlab-1.0.20 dpkg-source: info: unpacking librostlab_1.0.20.orig.tar.gz dpkg-source: info: unpacking librostlab_1.0.20-14.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/86953/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='667ac293e08f4e75b20e5ffe38dddc15' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='86953' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_JwGM --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1 --logfile b1/build.log librostlab_1.0.20-14.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/86953/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-linktree, doxygen, graphviz, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, texlive-plain-generic, sphinx-common, python3-sphinxcontrib.jquery, dpkg-dev (>= 1.22.5), d-shlibs (>= 0.106~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19790 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-linktree; however: Package dh-linktree is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib.jquery; however: Package python3-sphinxcontrib.jquery is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs (>= 0.106~); however: Package d-shlibs is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-linktree{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libavif16{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp19{a} libclang1-19{a} libcommons-logging-java{a} libcommons-parent-java{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libfontbox-java{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libglib2.0-0t64{a} libgraphite2-3{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu76{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libkpathsea6{a} liblab-gamut1{a} liblerc4{a} libllvm19{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmpfi0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libpathplan4{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libptexenc1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsvtav1enc2{a} libsynctex2{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} preview-latex-style{a} procps{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-defusedxml{a} python3-docutils{a} python3-idna{a} python3-imagesize{a} python3-jinja2{a} python3-markupsafe{a} python3-minimal{a} python3-packaging{a} python3-pygments{a} python3-requests{a} python3-roman{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinxcontrib.jquery{a} python3-urllib3{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} xdg-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl default-jre dvisvgm fonts-liberation javascript-common libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmail-sendmail-perl libnet-dbus-perl libspreadsheet-parseexcel-perl libx11-protocol-perl linux-sysctl-defaults lmodern lynx psmisc python3-pil ruby shared-mime-info tex-gyre tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 184 newly installed, 0 to remove and 0 not upgraded. Need to get 259 MB of archives. After unpacking 957 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.2-3 [860 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.2-3 [2271 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.2-2 [27.1 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-1 [259 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.2-3 [1959 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.2-3 [746 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.2-2 [10.1 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.2-2 [28.1 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 openssl i386 3.4.1-1 [1432 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20241223 [164 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-4 [337 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-4 [117 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-4 [43.4 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libtext-charwidth-perl i386 0.04-11+b4 [9656 B] Get: 31 http://deb.debian.org/debian unstable/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 32 http://deb.debian.org/debian unstable/main i386 ucf all 3.0051 [42.8 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 d-shlibs all 0.109 [11.1 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 45 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 dh-linktree all 0.9 [11.3 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20250104-1 [98.1 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libllvm19 i386 1:19.1.7-3 [30.4 MB] Get: 59 http://deb.debian.org/debian unstable/main i386 libclang-cpp19 i386 1:19.1.7-3 [15.5 MB] Get: 60 http://deb.debian.org/debian unstable/main i386 libclang1-19 i386 1:19.1.7-3 [8999 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libfmt10 i386 10.1.1+ds1-4 [134 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2.1 [5224 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.2 [318 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.2 [402 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-2.2 [463 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.4-3 [40.7 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.4-3 [67.9 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.12.0-1 [1903 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.5.1-1 [336 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libabsl20240722 i386 20240722.0-1.5 [549 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-3+b1 [331 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 librav1e0.7 i386 0.7.1-9+b1 [675 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libsvtav1enc2 i386 2.3.0+dfsg-1 [1053 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0.1904.20250204-1 [112 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.2.1-1 [141 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.19.7-1 [12.0 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b3 [198 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.19.7-1 [16.0 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.19.7-1 [545 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.0-2 [1583 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-2 [360 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b3 [58.3 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-12+b1 [131 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.5.4-4 [417 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3+b1 [39.9 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2+b1 [50.3 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.56.3-1 [236 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.56.3-1 [59.6 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.56.3-1 [36.8 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.4-3 [42.6 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.4-3 [719 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.4-3 [203 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.4-3 [199 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.6-1 [38.0 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2+b2 [194 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b4 [60.8 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.16-1 [220 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.4-3 [583 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 33-2 [5852 B] Get: 132 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libicu76 i386 76.1-3 [9893 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2024.20240313.70630+ds-6 [160 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libmpfi0 i386 1.5.4+ds-4 [38.8 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libpaper2 i386 2.2.5-0.3+b2 [17.1 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 2.2.5-0.3+b2 [16.4 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b2 [24.5 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2024.20240313.70630+ds-6 [50.2 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2024.20240313.70630+ds-6 [65.8 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1+b1 [285 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2024.20240313.70630+ds-6 [129 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.2-1 [81.2 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.78+dfsg.1-0.1 [60.7 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 tex-common all 6.19 [29.4 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 python-babel-localedata all 2.17.0-1 [6050 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 python3-babel all 2.17.0-1 [117 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 158 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 python3-charset-normalizer i386 3.4.1-1+b1 [127 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 python3-roman all 5.0-1 [10.6 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 python3-idna all 3.10-1 [42.0 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 165 http://deb.debian.org/debian unstable/main i386 python3-markupsafe i386 2.1.5-1+b3 [14.0 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 python3-jinja2 all 3.1.6-1 [107 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 python3-urllib3 all 2.3.0-2 [114 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 sphinx-common all 8.1.3-5 [617 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 python3-sphinx all 8.1.3-5 [468 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 175 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2024.20240313.70630+ds-6 [8361 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.2.1-2 [75.8 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 texlive-base all 2024.20250309-1 [23.1 MB] Get: 179 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2024.20250309-1 [1294 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2024.20250309-1 [17.0 MB] Get: 183 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Get: 184 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2024.20250309-2 [29.0 MB] Fetched 259 MB in 7s (36.6 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19790 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-3_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.2-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.7.1-1_i386.deb ... Unpacking libexpat1:i386 (2.7.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.2-3_i386.deb ... Unpacking python3.13-minimal (3.13.2-3) ... Setting up libpython3.13-minimal:i386 (3.13.2-3) ... Setting up libexpat1:i386 (2.7.1-1) ... Setting up python3.13-minimal (3.13.2-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20124 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.2-2_i386.deb ... Unpacking python3-minimal (3.13.2-2) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-1_all.deb ... Unpacking tzdata (2025b-1) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../4-libffi8_3.4.7-1_i386.deb ... Unpacking libffi8:i386 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../6-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-3_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.2-3) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-3_i386.deb ... Unpacking python3.13 (3.13.2-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.13.2-2_i386.deb ... Unpacking libpython3-stdlib:i386 (3.13.2-2) ... Setting up python3-minimal (3.13.2-2) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21135 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.2-2_i386.deb ... Unpacking python3 (3.13.2-2) ... Selecting previously unselected package sgml-base. 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Setting up fontconfig (2.15.0-2.2) ... Regenerating fonts cache... done. Setting up libxi6:i386 (2:1.8.2-1) ... Setting up python3.13 (3.13.2-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:i386 (1.56.3-1) ... Setting up python3 (3.13.2-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-markupsafe (2.1.5-1+b3) ... Setting up libcairo2:i386 (1.18.4-1+b1) ... Setting up tex-common (6.19) ... update-language: texlive-base not installed and configured, doing nothing! Setting up python3-roman (5.0-1) ... Setting up python3-jinja2 (3.1.6-1) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up doxygen (1.9.8+ds-2.1) ... Setting up python3-packaging (24.2-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libraqm0:i386 (0.10.2-1) ... Setting up sphinx-common (8.1.3-5) ... Setting up libxt6t64:i386 (1:1.2.1-1.2+b2) ... Setting up python3-idna (3.10-1) ... Setting up python3-urllib3 (2.3.0-2) ... Setting up libpangoft2-1.0-0:i386 (1.56.3-1) ... Setting up libpangocairo-1.0-0:i386 (1.56.3-1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b4) ... Setting up python3-babel (2.17.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.1-1+b1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up preview-latex-style (13.2-1) ... Setting up debhelper (13.24.2) ... Setting up libxaw7:i386 (2:1.0.16-1) ... Setting up python3-requests (2.32.3+dfsg-5) ... Setting up texlive-binaries (2024.20240313.70630+ds-6) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2024.20250309-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up dh-linktree (0.9) ... Setting up texlive-plain-generic (2024.20250309-2) ... Setting up texlive-latex-base (2024.20250309-1) ... Setting up texlive-latex-recommended (2024.20250309-1) ... Setting up texlive-pictures (2024.20250309-1) ... Setting up texlive-fonts-recommended (2024.20250309-1) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/librostlab-1.0.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librostlab_1.0.20-14_source.changes dpkg-buildpackage: info: source package librostlab dpkg-buildpackage: info: source version 1.0.20-14 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with linktree dh_clean debian/rules binary dh binary --with linktree dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:9: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:9: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:7: installing './compile' configure.ac:5: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... 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PROJECT='librostlab' DOCDIR='../doxygen-doc' VERSION='1.0.20' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='YES' /usr/bin/doxygen ./Doxyfile warning: Tag 'SYMBOL_CACHE_SIZE' at line 290 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 490 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 761 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 841 of file './Doxyfile' has become obsolete. 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Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/librostlab-1.0.20/lib/rostlab Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/aux_functions.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/aux_functions.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/blosum62.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/blosum62.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/mapAA2int.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/mapAA2int.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/readFasta.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/readFasta.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdexcept.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdexcept.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdio.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdio.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdlib.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdlib.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/umask_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/umask_resource.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file rostlab/aux_functions.h... Generating code for file rostlab/blosum62.h... Generating code for file rostlab/cwd_resource.h... Generating code for file rostlab/cxxgrp.h... Generating code for file rostlab/cxxpwd.h... Generating code for file rostlab/euid_egid_resource.h... Generating code for file rostlab/file_lock_resource.h... Generating code for file rostlab/mapAA2int.h... Generating code for file rostlab/readFasta.h... Generating code for file rostlab/rostlab_stdexcept.h... Generating code for file rostlab/rostlab_stdio.h... Generating code for file rostlab/rostlab_stdlib.h... Generating code for file rostlab/umask_resource.h... Generating file documentation... Generating docs for file rostlab/aux_functions.h... Generating docs for file rostlab/blosum62.h... Generating docs for file rostlab/cwd_resource.h... Generating docs for file rostlab/cxxgrp.h... Generating docs for file rostlab/cxxpwd.h... Generating docs for file rostlab/euid_egid_resource.h... Generating docs for file rostlab/file_lock_resource.h... Generating docs for file rostlab/mapAA2int.h... Generating docs for file rostlab/readFasta.h... Generating docs for file rostlab/rostlab_stdexcept.h... Generating docs for file rostlab/rostlab_stdio.h... Generating docs for file rostlab/rostlab_stdlib.h... Generating docs for file rostlab/umask_resource.h... Generating page documentation... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace rostlab Generating docs for compound rostlab::cwd_resource... Generating docs for compound rostlab::cxx_group... Generating docs for compound rostlab::cxx_passwd... Generating docs for compound rostlab::error_backtracer... Generating docs for compound rostlab::euid_egid_resource... Generating docs for compound rostlab::exception... Generating docs for compound rostlab::file_lock_resource... Generating docs for nested compound rostlab::file_lock_resource::wouldblock... Generating docs for compound rostlab::gid_not_found_error... Generating docs for compound rostlab::gname_not_found_error... Generating docs for compound rostlab::runtime_error... Generating docs for compound rostlab::uid_not_found_error... Generating docs for compound rostlab::umask_resource... Generating docs for compound rostlab::uname_not_found_error... Generating docs for namespace rostlab::bio Generating docs for compound rostlab::bio::seq... Generating docs for namespace rostlab::bio::fmt Generating docs for compound rostlab::bio::fmt::fasta... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 25 parallel threads... 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symbol lookup cache used 446/65536 hits=4421 misses=446 finished... cd ../doxygen-doc/latex; \ rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \ /usr/bin/pdflatex refman.tex; \ /usr/bin/makeindex refman.idx; \ /usr/bin/pdflatex refman.tex; \ countdown=5; \ while /usr/bin/egrep 'Rerun (LaTeX|to get cross-references right)' \ refman.log > /dev/null 2>&1 \ && test $countdown -gt 0; do \ /usr/bin/pdflatex refman.tex; \ countdown=`expr $countdown - 1`; \ done; \ mv refman.pdf ../librostlab.pdf This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./refman.tex LaTeX2e <2024-11-01> patch level 2 L3 programming layer <2025-01-18> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2024/06/29 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) 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[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}{/usr/share/texlive/texmf- dist/fonts/enc/dvips/base/8r.enc}] [2] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [1] [2] [3] [4] [5] [6] Chapter 1. (./namespaces.tex) [1] [2] Chapter 2. (./hierarchy.tex) [3] [4] Chapter 3. (./annotated.tex) [5] [6] Chapter 4. (./files.tex) [7] [8] Chapter 5. (./namespacerostlab.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd) [9] [10] [11] [12] [13] [14] [15] [16]) (./namespacerostlab_1_1bio.tex) (./namespacerostlab_1_1bio_1_1fmt.tex) [17] [18] Chapter 6. (./classrostlab_1_1cwd__resource.tex [19]) (./structrostlab_1_1cxx__group.tex [20] [21]) (./structrostlab_1_1cxx__passwd.tex [22] [23]) (./classrostlab_1_1error__backtracer.tex <./classrostlab_1_1error__backtr acer__inherit__graph.pdf> [24]) (./classrostlab_1_1euid__egid__resource.tex [25]) (./classrostlab_1_1exception.tex <./classrostlab_1_1exception__inherit__g raph.pdf> <./classrostlab_1_1exception__coll__graph.pdf> [26]) (./classrostlab_1_1bio_1_1fmt_1_1fasta.tex) (./classrostlab_1_1file__lock__resource.tex [27] [28]) (./classrostlab_1_1gid__not__found__error.tex [29] <./classrostlab_1_1gid__not__found__error__inherit__graph.pdf> <./classros tlab_1_1gid__not__found__error__coll__graph.pdf> [30]) (./classrostlab_1_1gname__not__found__error.tex <./classrostlab_1_1gname_ _not__found__error__inherit__graph.pdf> [31] <./classrostlab_1_1gname__not__found__error__coll__graph.pdf> [32]) (./classrostlab_1_1runtime__error.tex <./classrostlab_1_1runtime__error__ inherit__graph.pdf> <./classrostlab_1_1runtime__error__coll__graph.pdf> [33]) (./classrostlab_1_1bio_1_1seq.tex [34]) (./classrostlab_1_1uid__not__found__error.tex <./classrostlab_1_1uid__not __found__error__inherit__graph.pdf> [35] <./classrostlab_1_1uid__not__found__error__coll__graph.pdf> [36]) (./classrostlab_1_1umask__resource.tex) (./classrostlab_1_1uname__not__found__error.tex [37] <./classrostlab_1_1uname__not__found__error__inherit__graph.pdf> <./classr ostlab_1_1uname__not__found__error__coll__graph.pdf> [38]) (./classrostlab_1_1file__lock__resource_1_1wouldblock.tex <./classrostlab _1_1file__lock__resource_1_1wouldblock__inherit__graph.pdf> <./classrostlab_1_1 file__lock__resource_1_1wouldblock__coll__graph.pdf> [39]) [40] Chapter 7. (./aux__functions_8h.tex <./aux__functions_8h__incl.pdf> [41]) (./aux__functions_8h_source.tex [42] [43]) (./blosum62_8h.tex [44]) (./blosum62_8h_source.tex) (./cwd__resource_8h.tex <./cwd__resource_8h__i ncl.pdf>) (./cwd__resource_8h_source.tex [45] [46]) (./cxxgrp_8h.tex <./cxxgrp_8h__incl.pdf>) (./cxxgrp_8h_source.tex [47] [48]) (./cxxpwd_8h.tex <./cxxpwd_8h__incl.pdf> [49]) (./cxxpwd_8h_source.tex [50] [51]) (./euid__egid__resource_8h.tex <./euid__egid__resource_8h__incl.pdf>) (./euid__egid__resource_8h_source.tex [52] [53]) (./file__lock__resource_8h.tex <./file__lock__resource_8h__incl.pdf>) (./file__lock__resource_8h_source.tex [54] [55]) (./mapAA2int_8h.tex <./mapAA2int_8h__incl.pdf>) (./mapAA2int_8h_source.tex [56] [57]) (./readFasta_8h.tex <./readFasta_8h__incl.pdf>) (./readFasta_8h_source.tex [58] [59]) (./rostlab__stdexcept_8h.tex <./rostlab__stdexcept_8h__incl.pdf> <./rostl ab__stdexcept_8h__dep__incl.pdf> [60]) (./rostlab__stdexcept_8h_source.tex [61]) (./rostlab__stdio_8h.tex <./rostlab__stdio_8h__incl.pdf>) (./rostlab__stdio_8h_source.tex [62]) (./rostlab__stdlib_8h.tex <./rostlab__stdlib_8h__incl.pdf> [63]) (./rostlab__stdlib_8h_source.tex [64] [65]) (./umask__resource_8h.tex <./umask__resource_8h__incl.pdf>) (./umask__resource_8h_source.tex [66]) [67] [68] (./refman.ind [69] [70] [71]) (./refman.aux) Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) Output written on refman.pdf (79 pages, 538222 bytes). Transcript written on refman.log. make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_build -Nlibrostlab-doc make -j22 make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make all-recursive make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making all in lib make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make all-am make[4]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c -o librostlab_la-blosum62.lo `test -f 'blosum62.cpp' || echo './'`blosum62.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c blosum62.cpp -fPIC -DPIC -o .libs/librostlab_la-blosum62.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c blosum62.cpp -o librostlab_la-blosum62.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wall -Wl,-z,relro -Wl,-z,now -o librostlab.la -rpath /usr/lib/i386-linux-gnu librostlab_la-blosum62.lo libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/14/crtbeginS.o .libs/librostlab_la-blosum62.o -L/usr/lib/gcc/i686-linux-gnu/14 -L/usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/14/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/14/crtendS.o /usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,librostlab.so.3 -o .libs/librostlab.so.3.0.0 libtool: link: (cd ".libs" && rm -f "librostlab.so.3" && ln -s "librostlab.so.3.0.0" "librostlab.so.3") libtool: link: (cd ".libs" && rm -f "librostlab.so" && ln -s "librostlab.so.3.0.0" "librostlab.so") libtool: link: ar cr .libs/librostlab.a librostlab_la-blosum62.o libtool: link: ranlib .libs/librostlab.a libtool: link: ( cd ".libs" && rm -f "librostlab.la" && ln -s "../librostlab.la" "librostlab.la" ) make[4]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_test make -j22 check "TESTSUITEFLAGS=-j22 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making check in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make check-am make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/librostlab-1.0.20/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making install in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make install-am make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[4]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c librostlab.la '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/librostlab.so.3.0.0 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so.3 || { rm -f librostlab.so.3 && ln -s librostlab.so.3.0.0 librostlab.so.3; }; }) libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so || { rm -f librostlab.so && ln -s librostlab.so.3.0.0 librostlab.so; }; }) libtool: install: /usr/bin/install -c .libs/librostlab.lai /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.la libtool: install: /usr/bin/install -c .libs/librostlab.a /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: install: chmod 644 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: install: ranlib /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/include/rostlab' /usr/bin/install -c -m 644 rostlab/aux_functions.h rostlab/blosum62.h rostlab/cwd_resource.h rostlab/cxxgrp.h rostlab/cxxpwd.h rostlab/euid_egid_resource.h rostlab/file_lock_resource.h rostlab/mapAA2int.h rostlab/readFasta.h rostlab/rostlab_stdexcept.h rostlab/rostlab_stdio.h rostlab/rostlab_stdlib.h rostlab/umask_resource.h '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/include/rostlab' make[4]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_install d-shlibmove --commit \ --t64 \ --multiarch \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/librostlab3-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/librostlab3t64/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/librostlab.a debian/librostlab3-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/librostlab.so debian/librostlab3-dev/usr/lib/i386-linux-gnu mv /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3 debian/librostlab3t64/usr/lib/i386-linux-gnu mv /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 debian/librostlab3t64/usr/lib/i386-linux-gnu PKGDEV=librostlab3-dev PKGSHL=librostlab3t64 install -d -m 755 debian/librostlab3-dev/usr/include mv debian/tmp/usr/include/rostlab debian/librostlab3-dev/usr/include find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_installdocs dh_installdocs: warning: Cannot auto-detect main package for librostlab-doc. If the default is wrong, please use --doc-main-package find debian -name "*_*.md5" -delete make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_installchangelogs dh_installexamples dh_lintian dh_perl dh_link dh_linktree dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_compress -Xlibrostlab.tag make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_fixperms debian/rules override_dh_missing make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_missing --list-missing make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package librostlab3t64: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${js:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab3t64: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'librostlab3t64' in '../librostlab3t64_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab3t64-dbgsym' in '../librostlab3t64-dbgsym_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab3-dev' in '../librostlab3-dev_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab-doc' in '../librostlab-doc_1.0.20-14_all.deb'. dpkg-genbuildinfo --build=binary -O../librostlab_1.0.20-14_i386.buildinfo dpkg-genchanges --build=binary -O../librostlab_1.0.20-14_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/86953 and its subdirectories I: Current time: Tue May 5 07:13:24 -12 2026 I: pbuilder-time-stamp: 1778008404 Tue May 5 19:13:24 UTC 2026 I: Signing ./b1/librostlab_1.0.20-14_i386.buildinfo as librostlab_1.0.20-14_i386.buildinfo.asc Tue May 5 19:13:24 UTC 2026 I: Signed ./b1/librostlab_1.0.20-14_i386.buildinfo as ./b1/librostlab_1.0.20-14_i386.buildinfo.asc Tue May 5 19:13:24 UTC 2026 - build #1 for librostlab/unstable/i386 on ionos16-i386 done. Starting cleanup. All cleanup done. Tue May 5 19:13:24 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-4aqPwSXa, removing. /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Apr 2 12:50 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 2 12:47 b2 -rw-r--r-- 1 jenkins jenkins 2434 Dec 24 20:58 librostlab_1.0.20-14.dsc -rw------- 1 jenkins jenkins 3566 Apr 2 12:47 rbuildlog.x6oQdH0 /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1: total 1164 -rw-r--r-- 1 jenkins jenkins 133351 Apr 2 12:50 build.log -rw-r--r-- 1 jenkins jenkins 982852 Apr 2 12:50 librostlab-doc_1.0.20-14_all.deb -rw-r--r-- 1 jenkins jenkins 12516 Apr 2 12:50 librostlab3-dev_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 2372 Apr 2 12:50 librostlab3t64-dbgsym_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 5084 Apr 2 12:50 librostlab3t64_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 6144 Apr 2 12:50 librostlab_1.0.20-14.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2434 Apr 2 12:50 librostlab_1.0.20-14.dsc -rw-r--r-- 1 jenkins jenkins 10594 Apr 2 12:50 librostlab_1.0.20-14_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 11476 Apr 2 12:50 librostlab_1.0.20-14_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2188 Apr 2 12:50 librostlab_1.0.20-14_i386.changes -rw-r--r-- 1 jenkins jenkins 1300 Apr 2 12:50 librostlab_1.0.20-14_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2: total 0 Wed Apr 2 12:50:26 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue May 5 07:10:32 -12 2026 I: pbuilder-time-stamp: 1778008232 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [librostlab_1.0.20-14.dsc] I: copying [./librostlab_1.0.20.orig.tar.gz] I: copying [./librostlab_1.0.20-14.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./librostlab_1.0.20-14.dsc: unsupported subcommand dpkg-source: info: extracting librostlab in librostlab-1.0.20 dpkg-source: info: unpacking librostlab_1.0.20.orig.tar.gz dpkg-source: info: unpacking librostlab_1.0.20-14.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/86953/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='667ac293e08f4e75b20e5ffe38dddc15' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='86953' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_JwGM --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1 --logfile b1/build.log librostlab_1.0.20-14.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/86953/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-linktree, doxygen, graphviz, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, texlive-plain-generic, sphinx-common, python3-sphinxcontrib.jquery, dpkg-dev (>= 1.22.5), d-shlibs (>= 0.106~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19790 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-linktree; however: Package dh-linktree is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib.jquery; however: Package python3-sphinxcontrib.jquery is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs (>= 0.106~); however: Package d-shlibs is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-linktree{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libavif16{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp19{a} libclang1-19{a} libcommons-logging-java{a} libcommons-parent-java{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libfontbox-java{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libglib2.0-0t64{a} libgraphite2-3{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu76{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libkpathsea6{a} liblab-gamut1{a} liblerc4{a} libllvm19{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmpfi0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libpathplan4{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libptexenc1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsvtav1enc2{a} libsynctex2{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} preview-latex-style{a} procps{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-defusedxml{a} python3-docutils{a} python3-idna{a} python3-imagesize{a} python3-jinja2{a} python3-markupsafe{a} python3-minimal{a} python3-packaging{a} python3-pygments{a} python3-requests{a} python3-roman{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinxcontrib.jquery{a} python3-urllib3{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} xdg-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl default-jre dvisvgm fonts-liberation javascript-common libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmail-sendmail-perl libnet-dbus-perl libspreadsheet-parseexcel-perl libx11-protocol-perl linux-sysctl-defaults lmodern lynx psmisc python3-pil ruby shared-mime-info tex-gyre tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 184 newly installed, 0 to remove and 0 not upgraded. Need to get 259 MB of archives. After unpacking 957 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.2-3 [860 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.2-3 [2271 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.2-2 [27.1 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-1 [259 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.2-3 [1959 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.2-3 [746 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.2-2 [10.1 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.2-2 [28.1 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 openssl i386 3.4.1-1 [1432 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20241223 [164 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-4 [337 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-4 [117 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-4 [43.4 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libtext-charwidth-perl i386 0.04-11+b4 [9656 B] Get: 31 http://deb.debian.org/debian unstable/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 32 http://deb.debian.org/debian unstable/main i386 ucf all 3.0051 [42.8 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 d-shlibs all 0.109 [11.1 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 45 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 dh-linktree all 0.9 [11.3 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20250104-1 [98.1 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libllvm19 i386 1:19.1.7-3 [30.4 MB] Get: 59 http://deb.debian.org/debian unstable/main i386 libclang-cpp19 i386 1:19.1.7-3 [15.5 MB] Get: 60 http://deb.debian.org/debian unstable/main i386 libclang1-19 i386 1:19.1.7-3 [8999 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libfmt10 i386 10.1.1+ds1-4 [134 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2.1 [5224 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.2 [318 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.2 [402 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-2.2 [463 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.4-3 [40.7 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.4-3 [67.9 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.12.0-1 [1903 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.5.1-1 [336 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libabsl20240722 i386 20240722.0-1.5 [549 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-3+b1 [331 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 librav1e0.7 i386 0.7.1-9+b1 [675 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libsvtav1enc2 i386 2.3.0+dfsg-1 [1053 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0.1904.20250204-1 [112 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.2.1-1 [141 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.19.7-1 [12.0 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b3 [198 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.19.7-1 [16.0 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.19.7-1 [545 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.0-2 [1583 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-2 [360 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b3 [58.3 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-12+b1 [131 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.5.4-4 [417 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3+b1 [39.9 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2+b1 [50.3 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.56.3-1 [236 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.56.3-1 [59.6 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.56.3-1 [36.8 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.4-3 [42.6 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.4-3 [719 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.4-3 [203 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.4-3 [199 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.6-1 [38.0 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2+b2 [194 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b4 [60.8 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.16-1 [220 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.4-3 [583 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 33-2 [5852 B] Get: 132 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libicu76 i386 76.1-3 [9893 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2024.20240313.70630+ds-6 [160 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libmpfi0 i386 1.5.4+ds-4 [38.8 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libpaper2 i386 2.2.5-0.3+b2 [17.1 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 2.2.5-0.3+b2 [16.4 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b2 [24.5 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2024.20240313.70630+ds-6 [50.2 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2024.20240313.70630+ds-6 [65.8 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1+b1 [285 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2024.20240313.70630+ds-6 [129 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.2-1 [81.2 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.78+dfsg.1-0.1 [60.7 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 tex-common all 6.19 [29.4 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 python-babel-localedata all 2.17.0-1 [6050 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 python3-babel all 2.17.0-1 [117 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 158 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 python3-charset-normalizer i386 3.4.1-1+b1 [127 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 python3-roman all 5.0-1 [10.6 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 python3-idna all 3.10-1 [42.0 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 165 http://deb.debian.org/debian unstable/main i386 python3-markupsafe i386 2.1.5-1+b3 [14.0 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 python3-jinja2 all 3.1.6-1 [107 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 python3-urllib3 all 2.3.0-2 [114 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 sphinx-common all 8.1.3-5 [617 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 python3-sphinx all 8.1.3-5 [468 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 175 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2024.20240313.70630+ds-6 [8361 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.2.1-2 [75.8 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 texlive-base all 2024.20250309-1 [23.1 MB] Get: 179 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2024.20250309-1 [1294 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2024.20250309-1 [17.0 MB] Get: 183 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Get: 184 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2024.20250309-2 [29.0 MB] Fetched 259 MB in 7s (36.6 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19790 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-3_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.2-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.7.1-1_i386.deb ... Unpacking libexpat1:i386 (2.7.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.2-3_i386.deb ... Unpacking python3.13-minimal (3.13.2-3) ... Setting up libpython3.13-minimal:i386 (3.13.2-3) ... Setting up libexpat1:i386 (2.7.1-1) ... Setting up python3.13-minimal (3.13.2-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20124 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.2-2_i386.deb ... Unpacking python3-minimal (3.13.2-2) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-1_all.deb ... Unpacking tzdata (2025b-1) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../4-libffi8_3.4.7-1_i386.deb ... Unpacking libffi8:i386 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../6-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-3_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.2-3) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-3_i386.deb ... Unpacking python3.13 (3.13.2-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.13.2-2_i386.deb ... Unpacking libpython3-stdlib:i386 (3.13.2-2) ... Setting up python3-minimal (3.13.2-2) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21135 files and directories currently installed.) Preparing to unpack .../000-python3_3.13.2-2_i386.deb ... Unpacking python3 (3.13.2-2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:i386. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-7_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-7_i386.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.4.1-1_i386.deb ... Unpacking openssl (3.4.1-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20241223_all.deb ... Unpacking ca-certificates (20241223) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.46-4_i386.deb ... Unpacking libmagic-mgc (1:5.46-4) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../008-libmagic1t64_1%3a5.46-4_i386.deb ... Unpacking libmagic1t64:i386 (1:5.46-4) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.46-4_i386.deb ... Unpacking file (1:5.46-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.40.4-5_i386.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../014-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libtext-charwidth-perl:i386. Preparing to unpack .../016-libtext-charwidth-perl_0.04-11+b4_i386.deb ... Unpacking libtext-charwidth-perl:i386 (0.04-11+b4) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../017-libtext-wrapi18n-perl_0.06-10_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-10) ... Selecting previously unselected package ucf. Preparing to unpack .../018-ucf_3.0051_all.deb ... Moving old data out of the way Unpacking ucf (3.0051) ... Selecting previously unselected package m4. Preparing to unpack .../019-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../020-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../021-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../022-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../023-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../024-d-shlibs_0.109_all.deb ... Unpacking d-shlibs (0.109) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../025-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../026-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../027-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../028-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../029-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../030-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../031-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../032-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../033-libunistring5_1.3-2_i386.deb ... Unpacking libunistring5:i386 (1.3-2) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../034-libxml2_2.12.7+dfsg+really2.9.14-0.4_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../035-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../036-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../037-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../038-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package dh-linktree. Preparing to unpack .../039-dh-linktree_0.9_all.deb ... Unpacking dh-linktree (0.9) ... Selecting previously unselected package xml-core. Preparing to unpack .../040-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package docutils-common. Preparing to unpack .../041-docutils-common_0.21.2+dfsg-2_all.deb ... Unpacking docutils-common (0.21.2+dfsg-2) ... Selecting previously unselected package libedit2:i386. Preparing to unpack .../042-libedit2_3.1-20250104-1_i386.deb ... Unpacking libedit2:i386 (3.1-20250104-1) ... Selecting previously unselected package libz3-4:i386. Preparing to unpack .../043-libz3-4_4.13.3-1_i386.deb ... Unpacking libz3-4:i386 (4.13.3-1) ... Selecting previously unselected package libllvm19:i386. Preparing to unpack .../044-libllvm19_1%3a19.1.7-3_i386.deb ... Unpacking libllvm19:i386 (1:19.1.7-3) ... Selecting previously unselected package libclang-cpp19. Preparing to unpack .../045-libclang-cpp19_1%3a19.1.7-3_i386.deb ... Unpacking libclang-cpp19 (1:19.1.7-3) ... Selecting previously unselected package libclang1-19. Preparing to unpack .../046-libclang1-19_1%3a19.1.7-3_i386.deb ... Unpacking libclang1-19 (1:19.1.7-3) ... Selecting previously unselected package libfmt10:i386. Preparing to unpack .../047-libfmt10_10.1.1+ds1-4_i386.deb ... Unpacking libfmt10:i386 (10.1.1+ds1-4) ... Selecting previously unselected package doxygen. Preparing to unpack .../048-doxygen_1.9.8+ds-2.1_i386.deb ... Unpacking doxygen (1.9.8+ds-2.1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../049-libbrotli1_1.1.0-2+b7_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../050-libpng16-16t64_1.6.47-1.1_i386.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/librostlab-1.0.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librostlab_1.0.20-14_source.changes dpkg-buildpackage: info: source package librostlab dpkg-buildpackage: info: source version 1.0.20-14 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with linktree dh_clean debian/rules binary dh binary --with linktree dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:9: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:9: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:7: installing './compile' configure.ac:5: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... 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(cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for egrep... /usr/bin/egrep checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating lib/Doxyfile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' /usr/bin/make -C lib doxygen-doc make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' rm -rf ../doxygen-doc SRCDIR='.' PROJECT='librostlab' DOCDIR='../doxygen-doc' VERSION='1.0.20' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='YES' /usr/bin/doxygen ./Doxyfile warning: Tag 'SYMBOL_CACHE_SIZE' at line 290 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 490 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 761 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 841 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 847 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'USE_INLINE_TREES' at line 1032 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1059 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1165 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1257 of file './Doxyfile' has become obsolete. 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To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1487 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1611 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. Doxygen version used: 1.9.8 Notice: Output directory '../doxygen-doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/librostlab-1.0.20/lib/rostlab Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/aux_functions.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/aux_functions.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/blosum62.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/blosum62.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/mapAA2int.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/mapAA2int.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/readFasta.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/readFasta.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdexcept.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdexcept.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdio.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdio.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdlib.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdlib.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/umask_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/umask_resource.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file rostlab/aux_functions.h... Generating code for file rostlab/blosum62.h... Generating code for file rostlab/cwd_resource.h... Generating code for file rostlab/cxxgrp.h... Generating code for file rostlab/cxxpwd.h... Generating code for file rostlab/euid_egid_resource.h... Generating code for file rostlab/file_lock_resource.h... Generating code for file rostlab/mapAA2int.h... Generating code for file rostlab/readFasta.h... Generating code for file rostlab/rostlab_stdexcept.h... Generating code for file rostlab/rostlab_stdio.h... Generating code for file rostlab/rostlab_stdlib.h... Generating code for file rostlab/umask_resource.h... Generating file documentation... Generating docs for file rostlab/aux_functions.h... Generating docs for file rostlab/blosum62.h... Generating docs for file rostlab/cwd_resource.h... Generating docs for file rostlab/cxxgrp.h... Generating docs for file rostlab/cxxpwd.h... Generating docs for file rostlab/euid_egid_resource.h... Generating docs for file rostlab/file_lock_resource.h... Generating docs for file rostlab/mapAA2int.h... Generating docs for file rostlab/readFasta.h... Generating docs for file rostlab/rostlab_stdexcept.h... Generating docs for file rostlab/rostlab_stdio.h... Generating docs for file rostlab/rostlab_stdlib.h... Generating docs for file rostlab/umask_resource.h... Generating page documentation... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace rostlab Generating docs for compound rostlab::cwd_resource... Generating docs for compound rostlab::cxx_group... Generating docs for compound rostlab::cxx_passwd... Generating docs for compound rostlab::error_backtracer... Generating docs for compound rostlab::euid_egid_resource... Generating docs for compound rostlab::exception... Generating docs for compound rostlab::file_lock_resource... Generating docs for nested compound rostlab::file_lock_resource::wouldblock... Generating docs for compound rostlab::gid_not_found_error... Generating docs for compound rostlab::gname_not_found_error... Generating docs for compound rostlab::runtime_error... Generating docs for compound rostlab::uid_not_found_error... Generating docs for compound rostlab::umask_resource... Generating docs for compound rostlab::uname_not_found_error... Generating docs for namespace rostlab::bio Generating docs for compound rostlab::bio::seq... Generating docs for namespace rostlab::bio::fmt Generating docs for compound rostlab::bio::fmt::fasta... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 25 parallel threads... Running dot for graph 1/66 Running dot for graph 2/66 Running dot for graph 3/66 Running dot for graph 4/66 Running dot for graph 5/66 Running dot for graph 6/66 Running dot for graph 7/66 Running dot for graph 8/66 Running dot for graph 9/66 Running dot for graph 10/66 Running dot for graph 11/66 Running dot for graph 12/66 Running dot for graph 13/66 Running dot for graph 14/66 Running dot for graph 15/66 Running dot for graph 16/66 Running dot for graph 17/66 Running dot for graph 18/66 Running dot for graph 19/66 Running dot for graph 20/66 Running dot for graph 21/66 Running dot for graph 22/66 Running dot for graph 23/66 Running dot for graph 24/66 Running dot for graph 25/66 Running dot for graph 26/66 Running dot for graph 27/66 Running dot for graph 28/66 Running dot for graph 29/66 Running dot for graph 30/66 Running dot for graph 31/66 Running dot for graph 32/66 Running dot for graph 33/66 Running dot for graph 34/66 Running dot for graph 35/66 Running dot for graph 36/66 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(./classrostlab_1_1cwd__resource.tex [19]) (./structrostlab_1_1cxx__group.tex [20] [21]) (./structrostlab_1_1cxx__passwd.tex [22] [23]) (./classrostlab_1_1error__backtracer.tex <./classrostlab_1_1error__backtr acer__inherit__graph.pdf> [24]) (./classrostlab_1_1euid__egid__resource.tex [25]) (./classrostlab_1_1exception.tex <./classrostlab_1_1exception__inherit__g raph.pdf> <./classrostlab_1_1exception__coll__graph.pdf> [26]) (./classrostlab_1_1bio_1_1fmt_1_1fasta.tex) (./classrostlab_1_1file__lock__resource.tex [27] [28]) (./classrostlab_1_1gid__not__found__error.tex [29] <./classrostlab_1_1gid__not__found__error__inherit__graph.pdf> <./classros tlab_1_1gid__not__found__error__coll__graph.pdf> [30]) (./classrostlab_1_1gname__not__found__error.tex <./classrostlab_1_1gname_ _not__found__error__inherit__graph.pdf> [31] <./classrostlab_1_1gname__not__found__error__coll__graph.pdf> [32]) (./classrostlab_1_1runtime__error.tex <./classrostlab_1_1runtime__error__ inherit__graph.pdf> <./classrostlab_1_1runtime__error__coll__graph.pdf> [33]) (./classrostlab_1_1bio_1_1seq.tex [34]) (./classrostlab_1_1uid__not__found__error.tex <./classrostlab_1_1uid__not __found__error__inherit__graph.pdf> [35] <./classrostlab_1_1uid__not__found__error__coll__graph.pdf> [36]) (./classrostlab_1_1umask__resource.tex) (./classrostlab_1_1uname__not__found__error.tex [37] <./classrostlab_1_1uname__not__found__error__inherit__graph.pdf> <./classr ostlab_1_1uname__not__found__error__coll__graph.pdf> [38]) (./classrostlab_1_1file__lock__resource_1_1wouldblock.tex <./classrostlab _1_1file__lock__resource_1_1wouldblock__inherit__graph.pdf> <./classrostlab_1_1 file__lock__resource_1_1wouldblock__coll__graph.pdf> [39]) [40] Chapter 7. 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-L/usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/14/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/14/crtendS.o /usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,librostlab.so.3 -o .libs/librostlab.so.3.0.0 libtool: link: (cd ".libs" && rm -f "librostlab.so.3" && ln -s "librostlab.so.3.0.0" "librostlab.so.3") libtool: link: (cd ".libs" && rm -f "librostlab.so" && ln -s "librostlab.so.3.0.0" "librostlab.so") libtool: link: ar cr .libs/librostlab.a librostlab_la-blosum62.o libtool: link: ranlib .libs/librostlab.a libtool: link: ( cd ".libs" && rm -f "librostlab.la" && ln -s "../librostlab.la" "librostlab.la" ) make[4]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_test make -j22 check "TESTSUITEFLAGS=-j22 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making check in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make check-am make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/librostlab-1.0.20/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making install in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make install-am make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[4]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c librostlab.la '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/librostlab.so.3.0.0 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so.3 || { rm -f librostlab.so.3 && ln -s librostlab.so.3.0.0 librostlab.so.3; }; }) libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so || { rm -f librostlab.so && ln -s librostlab.so.3.0.0 librostlab.so; }; }) libtool: install: /usr/bin/install -c .libs/librostlab.lai /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.la libtool: install: /usr/bin/install -c .libs/librostlab.a /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: install: chmod 644 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: install: ranlib /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/include/rostlab' /usr/bin/install -c -m 644 rostlab/aux_functions.h rostlab/blosum62.h rostlab/cwd_resource.h rostlab/cxxgrp.h rostlab/cxxpwd.h rostlab/euid_egid_resource.h rostlab/file_lock_resource.h rostlab/mapAA2int.h rostlab/readFasta.h rostlab/rostlab_stdexcept.h rostlab/rostlab_stdio.h rostlab/rostlab_stdlib.h rostlab/umask_resource.h '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/include/rostlab' make[4]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_install d-shlibmove --commit \ --t64 \ --multiarch \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/librostlab3-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/librostlab3t64/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/librostlab.a debian/librostlab3-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/librostlab.so debian/librostlab3-dev/usr/lib/i386-linux-gnu mv /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3 debian/librostlab3t64/usr/lib/i386-linux-gnu mv /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 debian/librostlab3t64/usr/lib/i386-linux-gnu PKGDEV=librostlab3-dev PKGSHL=librostlab3t64 install -d -m 755 debian/librostlab3-dev/usr/include mv debian/tmp/usr/include/rostlab debian/librostlab3-dev/usr/include find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_installdocs dh_installdocs: warning: Cannot auto-detect main package for librostlab-doc. If the default is wrong, please use --doc-main-package find debian -name "*_*.md5" -delete make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_installchangelogs dh_installexamples dh_lintian dh_perl dh_link dh_linktree dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_compress -Xlibrostlab.tag make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_fixperms debian/rules override_dh_missing make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_missing --list-missing make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package librostlab3t64: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${js:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab3t64: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'librostlab3t64' in '../librostlab3t64_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab3t64-dbgsym' in '../librostlab3t64-dbgsym_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab3-dev' in '../librostlab3-dev_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab-doc' in '../librostlab-doc_1.0.20-14_all.deb'. dpkg-genbuildinfo --build=binary -O../librostlab_1.0.20-14_i386.buildinfo dpkg-genchanges --build=binary -O../librostlab_1.0.20-14_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/86953 and its subdirectories I: Current time: Tue May 5 07:13:24 -12 2026 I: pbuilder-time-stamp: 1778008404 Wed Apr 2 12:50:27 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos2-i386.debian.net. Wed Apr 2 12:50:27 UTC 2025 I: Preparing to do remote build '2' on ionos2-i386.debian.net. Wed Apr 2 12:50:27 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Wed Apr 2 12:50:27 UTC 2025 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-y7AuvX' ==================================================================================== Wed Apr 2 12:50:28 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos2-i386, called using "2 librostlab unstable /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S 1.0.20-14" as arguments. Wed Apr 2 12:50:28 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-xYePcWII" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Apr 2 12:50:28 UTC 2025 I: Downloading source for unstable/librostlab=1.0.20-14 Reading package lists... NOTICE: 'librostlab' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/librostlab.git Please use: git clone https://salsa.debian.org/med-team/librostlab.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 363 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (tar) [354 kB] Get:3 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (diff) [6144 B] Fetched 363 kB in 0s (3587 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'librostlab' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/librostlab.git Please use: git clone https://salsa.debian.org/med-team/librostlab.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 363 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (dsc) [2434 B] Get:2 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (tar) [354 kB] Get:3 http://deb.debian.org/debian unstable/main librostlab 1.0.20-14 (diff) [6144 B] Fetched 363 kB in 0s (3587 kB/s) Download complete and in download only mode ============================================================================= Re-Building librostlab in unstable on i386 on ionos2-i386 now. Date: Wed Apr 2 14:50:30 CEST 2025 Date UTC: Wed Apr 2 12:50:30 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_bHn9 + case ${ARCH} in + let NUM_CPU-=3 + case $ARCH in + locale=de_CH + language=de + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' librostlab = debian-installer -o librostlab = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' librostlab = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_bHn9 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2 --logfile b2/build.log librostlab_1.0.20-14.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Apr 3 02:50:31 +14 2025 I: pbuilder-time-stamp: 1743598231 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [librostlab_1.0.20-14.dsc] I: copying [./librostlab_1.0.20.orig.tar.gz] I: copying [./librostlab_1.0.20-14.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./librostlab_1.0.20-14.dsc: unsupported subcommand dpkg-source: info: extracting librostlab in librostlab-1.0.20 dpkg-source: info: unpacking librostlab_1.0.20.orig.tar.gz dpkg-source: info: unpacking librostlab_1.0.20-14.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D01_modify_environment starting debug: Running on ionos2-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 2 12:50 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=925993cb211147e1a61e74ad5e308056 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=58606 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_bHn9 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2 --logfile b2/build.log librostlab_1.0.20-14.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-linktree, doxygen, graphviz, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, texlive-plain-generic, sphinx-common, python3-sphinxcontrib.jquery, dpkg-dev (>= 1.22.5), d-shlibs (>= 0.106~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19790 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-linktree; however: Package dh-linktree is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on texlive-plain-generic; however: Package texlive-plain-generic is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinxcontrib.jquery; however: Package python3-sphinxcontrib.jquery is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs (>= 0.106~); however: Package d-shlibs is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-linktree{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20240722{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libavif16{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp19{a} libclang1-19{a} libcommons-logging-java{a} libcommons-parent-java{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfmt10{a} libfontbox-java{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libglib2.0-0t64{a} libgraphite2-3{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu76{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libkpathsea6{a} liblab-gamut1{a} liblerc4{a} libllvm19{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmpfi0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper2{a} libpathplan4{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libptexenc1{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsvtav1enc2{a} libsynctex2{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} preview-latex-style{a} procps{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-defusedxml{a} python3-docutils{a} python3-idna{a} python3-imagesize{a} python3-jinja2{a} python3-markupsafe{a} python3-minimal{a} python3-packaging{a} python3-pygments{a} python3-requests{a} python3-roman{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinxcontrib.jquery{a} python3-urllib3{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} texlive-plain-generic{a} tzdata{a} ucf{a} x11-common{a} xdg-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl default-jre dvisvgm fonts-liberation javascript-common libarchive-cpio-perl libfile-mimeinfo-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmail-sendmail-perl libnet-dbus-perl libspreadsheet-parseexcel-perl libx11-protocol-perl linux-sysctl-defaults lmodern lynx psmisc python3-pil ruby shared-mime-info tex-gyre tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 184 newly installed, 0 to remove and 0 not upgraded. Need to get 259 MB of archives. After unpacking 957 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.2-3 [860 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.2-3 [2271 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.2-2 [27.1 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-1 [259 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.2-3 [1959 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.2-3 [746 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.2-2 [10.1 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.2-2 [28.1 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-7 [66.0 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-7 [876 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 openssl i386 3.4.1-1 [1432 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 ca-certificates all 20241223 [164 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-4 [337 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-4 [117 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-4 [43.4 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.4-5 [96.5 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libtext-charwidth-perl i386 0.04-11+b4 [9656 B] Get: 31 http://deb.debian.org/debian unstable/main i386 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get: 32 http://deb.debian.org/debian unstable/main i386 ucf all 3.0051 [42.8 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 d-shlibs all 0.109 [11.1 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 45 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 dh-linktree all 0.9 [11.3 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20250104-1 [98.1 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libllvm19 i386 1:19.1.7-3 [30.4 MB] Get: 59 http://deb.debian.org/debian unstable/main i386 libclang-cpp19 i386 1:19.1.7-3 [15.5 MB] Get: 60 http://deb.debian.org/debian unstable/main i386 libclang1-19 i386 1:19.1.7-3 [8999 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libfmt10 i386 10.1.1+ds1-4 [134 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2.1 [5224 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.2 [318 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.2 [402 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-2.2 [463 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.4-3 [40.7 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.4-3 [67.9 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.12.0-1 [1903 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.5.1-1 [336 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libabsl20240722 i386 20240722.0-1.5 [549 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-3+b1 [331 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 librav1e0.7 i386 0.7.1-9+b1 [675 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libsvtav1enc2 i386 2.3.0+dfsg-1 [1053 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0.1904.20250204-1 [112 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.2.1-1 [141 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.19.7-1 [12.0 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b3 [198 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.19.7-1 [16.0 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.19.7-1 [545 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.0-2 [1583 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-1+b1 [48.4 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-2 [360 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b3 [58.3 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-12+b1 [131 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.5.4-4 [417 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3+b1 [39.9 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2+b1 [50.3 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.56.3-1 [236 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.56.3-1 [59.6 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.56.3-1 [36.8 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.4-3 [42.6 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.4-3 [719 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.4-3 [203 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.4-3 [199 kB] Get: 124 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.6-1 [38.0 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2+b2 [194 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b4 [60.8 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.16-1 [220 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.4-3 [583 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libapache-pom-java all 33-2 [5852 B] Get: 132 http://deb.debian.org/debian unstable/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 135 http://deb.debian.org/debian unstable/main i386 libicu76 i386 76.1-3 [9893 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 8.1.3-5 [30.5 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libkpathsea6 i386 2024.20240313.70630+ds-6 [160 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 libmpfi0 i386 1.5.4+ds-4 [38.8 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 libpaper2 i386 2.2.5-0.3+b2 [17.1 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libpaper-utils i386 2.2.5-0.3+b2 [16.4 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 libpotrace0 i386 1.16-2+b2 [24.5 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libptexenc1 i386 2024.20240313.70630+ds-6 [50.2 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 libsynctex2 i386 2024.20240313.70630+ds-6 [65.8 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 libteckit0 i386 2.5.12+ds1-1+b1 [285 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 libtexlua53-5 i386 2024.20240313.70630+ds-6 [129 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 libxi6 i386 2:1.8.2-1 [81.2 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 libzzip-0-13t64 i386 0.13.78+dfsg.1-0.1 [60.7 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 tex-common all 6.19 [29.4 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 python-babel-localedata all 2.17.0-1 [6050 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 python3-babel all 2.17.0-1 [117 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 python3-certifi all 2025.1.31+ds-1 [9652 B] Get: 158 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 python3-charset-normalizer i386 3.4.1-1+b1 [127 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 python3-roman all 5.0-1 [10.6 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 python3-idna all 3.10-1 [42.0 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 165 http://deb.debian.org/debian unstable/main i386 python3-markupsafe i386 2.1.5-1+b3 [14.0 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 python3-jinja2 all 3.1.6-1 [107 kB] Get: 167 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-1 [55.3 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 python3-urllib3 all 2.3.0-2 [114 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 python3-requests all 2.32.3+dfsg-5 [72.2 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 sphinx-common all 8.1.3-5 [617 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 python3-sphinx all 8.1.3-5 [468 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 175 http://deb.debian.org/debian unstable/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 texlive-binaries i386 2024.20240313.70630+ds-6 [8361 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 xdg-utils all 1.2.1-2 [75.8 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 texlive-base all 2024.20250309-1 [23.1 MB] Get: 179 http://deb.debian.org/debian unstable/main i386 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 texlive-latex-base all 2024.20250309-1 [1294 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2024.20250309-1 [17.0 MB] Get: 183 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Get: 184 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2024.20250309-2 [29.0 MB] Fetched 259 MB in 4s (73.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19790 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-3_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.2-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.7.1-1_i386.deb ... Unpacking libexpat1:i386 (2.7.1-1) ... 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Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.2-3_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.2-3) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.2-3_i386.deb ... Unpacking python3.13 (3.13.2-3) ... Selecting previously unselected package libpython3-stdlib:i386. 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Setting up dh-autoreconf (20) ... Setting up libthai0:i386 (0.1.29-2+b1) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libglib2.0-0t64:i386 (2.84.0-2) ... No schema files found: doing nothing. Setting up libptexenc1:i386 (2024.20240313.70630+ds-6) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up ucf (3.0051) ... Setting up libjs-sphinxdoc (8.1.3-5) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up libgvpr2:i386 (2.42.4-3) ... Setting up groff-base (1.23.0-7) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:i386 (10.2.0-1+b1) ... Setting up libgts-0.7-5t64:i386 (0.7.6+darcs121130-5.2+b1) ... Setting up libfontconfig1:i386 (2.15.0-2.2) ... Setting up libsm6:i386 (2:1.2.6-1) ... Setting up libpython3.13-stdlib:i386 (3.13.2-3) ... Setting up libpython3-stdlib:i386 (3.13.2-2) ... Setting up libclang-cpp19 (1:19.1.7-3) ... Setting up fontconfig (2.15.0-2.2) ... Regenerating fonts cache... done. Setting up libxi6:i386 (2:1.8.2-1) ... Setting up python3.13 (3.13.2-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpango-1.0-0:i386 (1.56.3-1) ... Setting up python3 (3.13.2-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-markupsafe (2.1.5-1+b3) ... Setting up libcairo2:i386 (1.18.4-1+b1) ... Setting up tex-common (6.19) ... update-language: texlive-base not installed and configured, doing nothing! Setting up python3-roman (5.0-1) ... Setting up python3-jinja2 (3.1.6-1) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up doxygen (1.9.8+ds-2.1) ... Setting up python3-packaging (24.2-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-certifi (2025.1.31+ds-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libraqm0:i386 (0.10.2-1) ... Setting up sphinx-common (8.1.3-5) ... Setting up libxt6t64:i386 (1:1.2.1-1.2+b2) ... Setting up python3-idna (3.10-1) ... Setting up python3-urllib3 (2.3.0-2) ... Setting up libpangoft2-1.0-0:i386 (1.56.3-1) ... Setting up libpangocairo-1.0-0:i386 (1.56.3-1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b4) ... Setting up python3-babel (2.17.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.1-1+b1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up preview-latex-style (13.2-1) ... Setting up debhelper (13.24.2) ... Setting up libxaw7:i386 (2:1.0.16-1) ... Setting up python3-requests (2.32.3+dfsg-5) ... Setting up texlive-binaries (2024.20240313.70630+ds-6) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2024.20250309-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up dh-linktree (0.9) ... Setting up texlive-plain-generic (2024.20250309-2) ... Setting up texlive-latex-base (2024.20250309-1) ... Setting up texlive-latex-recommended (2024.20250309-1) ... Setting up texlive-pictures (2024.20250309-1) ... Setting up texlive-fonts-recommended (2024.20250309-1) ... Setting up texlive-latex-extra (2024.20250309-2) ... Setting up libheif-plugin-dav1d:i386 (1.19.7-1) ... Setting up libheif-plugin-libde265:i386 (1.19.7-1) ... Setting up libheif1:i386 (1.19.7-1) ... Setting up libgd3:i386 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-3) ... Setting up graphviz (2.42.4-3) ... Processing triggers for libc-bin (2.41-6) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-5) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for tex-common (6.19) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/58606/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/58606/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/librostlab-1.0.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../librostlab_1.0.20-14_source.changes dpkg-buildpackage: info: source package librostlab dpkg-buildpackage: info: source version 1.0.20-14 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with linktree dh_clean debian/rules binary dh binary --with linktree dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:9: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:9: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:7: installing './compile' configure.ac:5: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking build system type... i686-pc-linux-gnu checking host system type... i686-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert i686-pc-linux-gnu file names to i686-pc-linux-gnu format... func_convert_file_noop checking how to convert i686-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ranlib... ranlib checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for doxygen... /usr/bin/doxygen checking for perl... /usr/bin/perl checking for dot... /usr/bin/dot checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for egrep... /usr/bin/egrep checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating lib/Makefile config.status: creating lib/Doxyfile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' /usr/bin/make -C lib doxygen-doc make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' rm -rf ../doxygen-doc SRCDIR='.' PROJECT='librostlab' DOCDIR='../doxygen-doc' VERSION='1.0.20' PERL_PATH='/usr/bin/perl' HAVE_DOT='YES' DOT_PATH='/usr/bin' GENERATE_MAN='NO' GENERATE_RTF='NO' GENERATE_XML='NO' GENERATE_HTMLHELP='NO' GENERATE_CHI='NO' GENERATE_HTML='YES' GENERATE_LATEX='YES' /usr/bin/doxygen ./Doxyfile warning: Tag 'SYMBOL_CACHE_SIZE' at line 290 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 490 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 761 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 841 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 847 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'USE_INLINE_TREES' at line 1032 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1059 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1165 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1257 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1263 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1428 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 1441 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1450 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 1482 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1487 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1611 of file './Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. Doxygen version used: 1.9.8 Notice: Output directory '../doxygen-doc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/librostlab-1.0.20/lib/rostlab Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/aux_functions.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/aux_functions.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/blosum62.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/blosum62.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/mapAA2int.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/mapAA2int.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/readFasta.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/readFasta.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdexcept.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdexcept.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdio.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdio.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdlib.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/rostlab_stdlib.h... Preprocessing /build/reproducible-path/librostlab-1.0.20/lib/rostlab/umask_resource.h... Parsing file /build/reproducible-path/librostlab-1.0.20/lib/rostlab/umask_resource.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file rostlab/aux_functions.h... Generating code for file rostlab/blosum62.h... Generating code for file rostlab/cwd_resource.h... Generating code for file rostlab/cxxgrp.h... Generating code for file rostlab/cxxpwd.h... Generating code for file rostlab/euid_egid_resource.h... Generating code for file rostlab/file_lock_resource.h... Generating code for file rostlab/mapAA2int.h... Generating code for file rostlab/readFasta.h... Generating code for file rostlab/rostlab_stdexcept.h... Generating code for file rostlab/rostlab_stdio.h... Generating code for file rostlab/rostlab_stdlib.h... Generating code for file rostlab/umask_resource.h... Generating file documentation... Generating docs for file rostlab/aux_functions.h... Generating docs for file rostlab/blosum62.h... Generating docs for file rostlab/cwd_resource.h... Generating docs for file rostlab/cxxgrp.h... Generating docs for file rostlab/cxxpwd.h... Generating docs for file rostlab/euid_egid_resource.h... Generating docs for file rostlab/file_lock_resource.h... Generating docs for file rostlab/mapAA2int.h... Generating docs for file rostlab/readFasta.h... Generating docs for file rostlab/rostlab_stdexcept.h... Generating docs for file rostlab/rostlab_stdio.h... Generating docs for file rostlab/rostlab_stdlib.h... Generating docs for file rostlab/umask_resource.h... Generating page documentation... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for namespace rostlab Generating docs for compound rostlab::cwd_resource... Generating docs for compound rostlab::cxx_group... Generating docs for compound rostlab::cxx_passwd... Generating docs for compound rostlab::error_backtracer... Generating docs for compound rostlab::euid_egid_resource... Generating docs for compound rostlab::exception... Generating docs for compound rostlab::file_lock_resource... Generating docs for nested compound rostlab::file_lock_resource::wouldblock... Generating docs for compound rostlab::gid_not_found_error... Generating docs for compound rostlab::gname_not_found_error... Generating docs for compound rostlab::runtime_error... Generating docs for compound rostlab::uid_not_found_error... Generating docs for compound rostlab::umask_resource... Generating docs for compound rostlab::uname_not_found_error... Generating docs for namespace rostlab::bio Generating docs for compound rostlab::bio::seq... Generating docs for namespace rostlab::bio::fmt Generating docs for compound rostlab::bio::fmt::fasta... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... Running dot... Generating dot graphs using 14 parallel threads... 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(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex No file refman.toc. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/wasysym/uwasy.fd) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}{/usr/share/texlive/texmf- dist/fonts/enc/dvips/base/8r.enc}] [2] Chapter 1. (./namespaces.tex LaTeX Warning: Reference `namespacerostlab' on page 1 undefined on input line 3 . LaTeX Warning: Reference `namespacerostlab_1_1bio' on page 1 undefined on input line 4. LaTeX Warning: Reference `namespacerostlab_1_1bio_1_1fmt' on page 1 undefined o n input line 5. ) [1] [2] Chapter 2. (./hierarchy.tex LaTeX Warning: Reference `classrostlab_1_1cwd__resource' on page 3 undefined on input line 3. LaTeX Warning: Reference `structrostlab_1_1cxx__group' on page 3 undefined on i nput line 4. LaTeX Warning: Reference `structrostlab_1_1cxx__passwd' on page 3 undefined on input line 5. LaTeX Warning: Reference `classrostlab_1_1error__backtracer' on page 3 undefine d on input line 6. LaTeX Warning: Reference `classrostlab_1_1exception' on page 3 undefined on inp ut line 8. LaTeX Warning: Reference `classrostlab_1_1file__lock__resource_1_1wouldblock' o n page 3 undefined on input line 10. LaTeX Warning: Reference `classrostlab_1_1runtime__error' on page 3 undefined o n input line 12. LaTeX Warning: Reference `classrostlab_1_1gid__not__found__error' on page 3 und efined on input line 14. LaTeX Warning: Reference `classrostlab_1_1gname__not__found__error' on page 3 u ndefined on input line 15. 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(./annotated.tex LaTeX Warning: Reference `classrostlab_1_1cwd__resource' on page 5 undefined on input line 3. LaTeX Warning: Reference `structrostlab_1_1cxx__group' on page 5 undefined on i nput line 4. LaTeX Warning: Reference `structrostlab_1_1cxx__passwd' on page 5 undefined on input line 5. LaTeX Warning: Reference `classrostlab_1_1error__backtracer' on page 5 undefine d on input line 6. LaTeX Warning: Reference `classrostlab_1_1euid__egid__resource' on page 5 undef ined on input line 7. LaTeX Warning: Reference `classrostlab_1_1exception' on page 5 undefined on inp ut line 8. LaTeX Warning: Reference `classrostlab_1_1bio_1_1fmt_1_1fasta' on page 5 undefi ned on input line 9. LaTeX Warning: Reference `classrostlab_1_1file__lock__resource' on page 5 undef ined on input line 10. LaTeX Warning: Reference `classrostlab_1_1gid__not__found__error' on page 5 und efined on input line 11. LaTeX Warning: Reference `classrostlab_1_1gname__not__found__error' on page 5 u ndefined on input line 12. LaTeX Warning: Reference `classrostlab_1_1runtime__error' on page 5 undefined o n input line 13. LaTeX Warning: Reference `classrostlab_1_1bio_1_1seq' on page 5 undefined on in put line 14. LaTeX Warning: Reference `classrostlab_1_1uid__not__found__error' on page 5 und efined on input line 15. LaTeX Warning: Reference `classrostlab_1_1umask__resource' on page 5 undefined on input line 16. LaTeX Warning: Reference `classrostlab_1_1uname__not__found__error' on page 5 u ndefined on input line 17. LaTeX Warning: Reference `classrostlab_1_1file__lock__resource_1_1wouldblock' o n page 5 undefined on input line 18. ) [5] [6] Chapter 4. (./files.tex LaTeX Warning: Reference `aux__functions_8h' on page 7 undefined on input line 3. LaTeX Warning: Reference `blosum62_8h' on page 7 undefined on input line 4. LaTeX Warning: Reference `cwd__resource_8h' on page 7 undefined on input line 5 . LaTeX Warning: Reference `cxxgrp_8h' on page 7 undefined on input line 6. LaTeX Warning: Reference `cxxpwd_8h' on page 7 undefined on input line 7. LaTeX Warning: Reference `euid__egid__resource_8h' on page 7 undefined on input line 8. LaTeX Warning: Reference `file__lock__resource_8h' on page 7 undefined on input line 9. LaTeX Warning: Reference `mapAA2int_8h' on page 7 undefined on input line 10. LaTeX Warning: Reference `readFasta_8h' on page 7 undefined on input line 11. LaTeX Warning: Reference `rostlab__stdexcept_8h' on page 7 undefined on input l ine 12. LaTeX Warning: Reference `rostlab__stdio_8h' on page 7 undefined on input line 13. LaTeX Warning: Reference `rostlab__stdlib_8h' on page 7 undefined on input line 14. LaTeX Warning: Reference `umask__resource_8h' on page 7 undefined on input line 15. ) [7] [8] Chapter 5. (./namespacerostlab.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd) [9] [10] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [11] [12] [13] [14] [15] [16]) (./namespacerostlab_1_1bio.tex) (./namespacerostlab_1_1bio_1_1fmt.tex) [17] [18] Chapter 6. (./classrostlab_1_1cwd__resource.tex [19]) (./structrostlab_1_1cxx__group.tex [20] [21]) (./structrostlab_1_1cxx__passwd.tex [22] [23]) (./classrostlab_1_1error__backtracer.tex <./classrostlab_1_1error__backtr acer__inherit__graph.pdf> [24]) (./classrostlab_1_1euid__egid__resource.tex [25]) (./classrostlab_1_1exception.tex <./classrostlab_1_1exception__inherit__g raph.pdf> <./classrostlab_1_1exception__coll__graph.pdf> [26]) (./classrostlab_1_1bio_1_1fmt_1_1fasta.tex) (./classrostlab_1_1file__lock__resource.tex [27] [28]) (./classrostlab_1_1gid__not__found__error.tex [29] <./classrostlab_1_1gid__not__found__error__inherit__graph.pdf> <./classros tlab_1_1gid__not__found__error__coll__graph.pdf> [30]) (./classrostlab_1_1gname__not__found__error.tex <./classrostlab_1_1gname_ _not__found__error__inherit__graph.pdf> [31] <./classrostlab_1_1gname__not__found__error__coll__graph.pdf> [32]) (./classrostlab_1_1runtime__error.tex <./classrostlab_1_1runtime__error__ inherit__graph.pdf> <./classrostlab_1_1runtime__error__coll__graph.pdf> [33]) (./classrostlab_1_1bio_1_1seq.tex [34]) (./classrostlab_1_1uid__not__found__error.tex <./classrostlab_1_1uid__not __found__error__inherit__graph.pdf> [35] <./classrostlab_1_1uid__not__found__error__coll__graph.pdf> [36]) (./classrostlab_1_1umask__resource.tex) (./classrostlab_1_1uname__not__found__error.tex [37] <./classrostlab_1_1uname__not__found__error__inherit__graph.pdf> <./classr ostlab_1_1uname__not__found__error__coll__graph.pdf> [38]) (./classrostlab_1_1file__lock__resource_1_1wouldblock.tex <./classrostlab _1_1file__lock__resource_1_1wouldblock__inherit__graph.pdf> <./classrostlab_1_1 file__lock__resource_1_1wouldblock__coll__graph.pdf> [39]) [40] Chapter 7. (./aux__functions_8h.tex <./aux__functions_8h__incl.pdf> [41]) (./aux__functions_8h_source.tex [42] [43]) (./blosum62_8h.tex [44]) (./blosum62_8h_source.tex) (./cwd__resource_8h.tex <./cwd__resource_8h__i ncl.pdf>) (./cwd__resource_8h_source.tex [45] [46]) (./cxxgrp_8h.tex <./cxxgrp_8h__incl.pdf>) (./cxxgrp_8h_source.tex [47] [48]) (./cxxpwd_8h.tex <./cxxpwd_8h__incl.pdf> [49]) (./cxxpwd_8h_source.tex [50] [51]) (./euid__egid__resource_8h.tex <./euid__egid__resource_8h__incl.pdf>) (./euid__egid__resource_8h_source.tex [52] [53]) (./file__lock__resource_8h.tex <./file__lock__resource_8h__incl.pdf>) (./file__lock__resource_8h_source.tex [54] [55]) (./mapAA2int_8h.tex <./mapAA2int_8h__incl.pdf>) (./mapAA2int_8h_source.tex [56] [57]) (./readFasta_8h.tex <./readFasta_8h__incl.pdf>) (./readFasta_8h_source.tex [58] [59]) (./rostlab__stdexcept_8h.tex <./rostlab__stdexcept_8h__incl.pdf> <./rostl ab__stdexcept_8h__dep__incl.pdf> [60]) (./rostlab__stdexcept_8h_source.tex [61]) (./rostlab__stdio_8h.tex <./rostlab__stdio_8h__incl.pdf>) (./rostlab__stdio_8h_source.tex [62]) (./rostlab__stdlib_8h.tex <./rostlab__stdlib_8h__incl.pdf> [63]) (./rostlab__stdlib_8h_source.tex [64] [65]) (./umask__resource_8h.tex <./umask__resource_8h__incl.pdf>) (./umask__resource_8h_source.tex [66]) [67] [68] No file refman.ind. (./refman.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) Output written on refman.pdf (70 pages, 504551 bytes). Transcript written on refman.log. This is makeindex, version 2.17 [TeX Live 2025/dev] (kpathsea + Thai support). Scanning input file refman.idx....done (213 entries accepted, 0 rejected). Sorting entries.....done (1721 comparisons). Generating output file refman.ind....done (276 lines written, 0 warnings). Output written in refman.ind. Transcript written in refman.ilg. 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(./namespaces.tex) [1] [2] Chapter 2. (./hierarchy.tex) [3] [4] Chapter 3. (./annotated.tex) [5] [6] Chapter 4. (./files.tex) [7] [8] Chapter 5. (./namespacerostlab.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd) [9] [10] [11] [12] [13] [14] [15] [16]) (./namespacerostlab_1_1bio.tex) (./namespacerostlab_1_1bio_1_1fmt.tex) [17] [18] Chapter 6. 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directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_test make -j10 check "TESTSUITEFLAGS=-j10 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making check in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make check-am make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/librostlab-1.0.20/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making install in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make install-am make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[4]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' /bin/sh ../libtool --mode=install /usr/bin/install -c librostlab.la '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/librostlab.so.3.0.0 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so.3 || { rm -f librostlab.so.3 && ln -s librostlab.so.3.0.0 librostlab.so.3; }; }) libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so || { rm -f librostlab.so && ln -s librostlab.so.3.0.0 librostlab.so; }; }) libtool: install: /usr/bin/install -c .libs/librostlab.lai /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.la libtool: install: /usr/bin/install -c .libs/librostlab.a /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: install: chmod 644 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: install: ranlib /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.a libtool: warning: remember to run 'libtool --finish /usr/lib/i386-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/include/rostlab' /usr/bin/install -c -m 644 rostlab/aux_functions.h rostlab/blosum62.h rostlab/cwd_resource.h rostlab/cxxgrp.h rostlab/cxxpwd.h rostlab/euid_egid_resource.h rostlab/file_lock_resource.h rostlab/mapAA2int.h rostlab/readFasta.h rostlab/rostlab_stdexcept.h rostlab/rostlab_stdio.h rostlab/rostlab_stdlib.h rostlab/umask_resource.h '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/include/rostlab' make[4]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_install d-shlibmove --commit \ --t64 \ --multiarch \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/librostlab3-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/librostlab3t64/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/librostlab.a debian/librostlab3-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/librostlab.so debian/librostlab3-dev/usr/lib/i386-linux-gnu mv /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3 debian/librostlab3t64/usr/lib/i386-linux-gnu mv /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 debian/librostlab3t64/usr/lib/i386-linux-gnu PKGDEV=librostlab3-dev PKGSHL=librostlab3t64 install -d -m 755 debian/librostlab3-dev/usr/include mv debian/tmp/usr/include/rostlab debian/librostlab3-dev/usr/include find debian -name "lib*.la" -delete make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_installdocs dh_installdocs: warning: Cannot auto-detect main package for librostlab-doc. If the default is wrong, please use --doc-main-package find debian -name "*_*.md5" -delete make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_installchangelogs dh_installexamples dh_lintian dh_perl dh_link dh_linktree dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_compress -Xlibrostlab.tag make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_fixperms debian/rules override_dh_missing make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' dh_missing --list-missing make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package librostlab3t64: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${js:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab3t64: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'librostlab3t64' in '../librostlab3t64_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab3-dev' in '../librostlab3-dev_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab-doc' in '../librostlab-doc_1.0.20-14_all.deb'. dpkg-deb: building package 'librostlab3t64-dbgsym' in '../librostlab3t64-dbgsym_1.0.20-14_i386.deb'. dpkg-genbuildinfo --build=binary -O../librostlab_1.0.20-14_i386.buildinfo dpkg-genchanges --build=binary -O../librostlab_1.0.20-14_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/58606/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/58606/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/58606 and its subdirectories I: Current time: Thu Apr 3 02:56:24 +14 2025 I: pbuilder-time-stamp: 1743598584 + false + set +x Wed Apr 2 12:56:24 UTC 2025 I: Signing ./b2/librostlab_1.0.20-14_i386.buildinfo as librostlab_1.0.20-14_i386.buildinfo.asc Wed Apr 2 12:56:25 UTC 2025 I: Signed ./b2/librostlab_1.0.20-14_i386.buildinfo as ./b2/librostlab_1.0.20-14_i386.buildinfo.asc Wed Apr 2 12:56:25 UTC 2025 - build #2 for librostlab/unstable/i386 on ionos2-i386 done. Starting cleanup. All cleanup done. Wed Apr 2 12:56:25 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-xYePcWII, removing. /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S: total 152 drwxr-xr-x 2 jenkins jenkins 4096 Apr 2 12:50 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 2 12:56 b2 -rw-r--r-- 1 jenkins jenkins 2434 Dec 24 20:58 librostlab_1.0.20-14.dsc -rw------- 1 jenkins jenkins 137201 Apr 2 12:50 rbuildlog.x6oQdH0 /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1: total 1172 -rw-r--r-- 1 jenkins jenkins 133351 Apr 2 12:50 build.log -rw-r--r-- 1 jenkins jenkins 982852 Apr 2 12:50 librostlab-doc_1.0.20-14_all.deb -rw-r--r-- 1 jenkins jenkins 12516 Apr 2 12:50 librostlab3-dev_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 2372 Apr 2 12:50 librostlab3t64-dbgsym_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 5084 Apr 2 12:50 librostlab3t64_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 6144 Apr 2 12:50 librostlab_1.0.20-14.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2434 Apr 2 12:50 librostlab_1.0.20-14.dsc -rw-r--r-- 1 jenkins jenkins 10594 Apr 2 12:50 librostlab_1.0.20-14_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 11476 Apr 2 12:50 librostlab_1.0.20-14_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2188 Apr 2 12:50 librostlab_1.0.20-14_i386.changes -rw-r--r-- 1 jenkins jenkins 1300 Apr 2 12:50 librostlab_1.0.20-14_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2: total 1168 -rw-r--r-- 1 jenkins jenkins 135252 Apr 2 12:56 build.log -rw-r--r-- 1 jenkins jenkins 982948 Apr 2 12:56 librostlab-doc_1.0.20-14_all.deb -rw-r--r-- 1 jenkins jenkins 12516 Apr 2 12:56 librostlab3-dev_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 2372 Apr 2 12:56 librostlab3t64-dbgsym_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 5084 Apr 2 12:56 librostlab3t64_1.0.20-14_i386.deb -rw-r--r-- 1 jenkins jenkins 6144 Apr 2 12:56 librostlab_1.0.20-14.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2434 Apr 2 12:56 librostlab_1.0.20-14.dsc -rw-r--r-- 1 jenkins jenkins 10594 Apr 2 12:56 librostlab_1.0.20-14_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 11476 Apr 2 12:56 librostlab_1.0.20-14_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 2188 Apr 2 12:56 librostlab_1.0.20-14_i386.changes -rw-r--r-- 1 jenkins jenkins 1300 Apr 2 12:56 librostlab_1.0.20-14_source.changes Wed Apr 2 12:56:26 UTC 2025 I: Deleting $TMPDIR on ionos2-i386.debian.net. Wed Apr 2 12:56:26 UTC 2025 I: librostlab_1.0.20-14_i386.changes: Format: 1.8 Date: Tue, 24 Dec 2024 21:38:26 +0100 Source: librostlab Binary: librostlab-doc librostlab3-dev librostlab3t64 librostlab3t64-dbgsym Architecture: all i386 Version: 1.0.20-14 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librostlab-doc - C++ library for computational biology (documentation) librostlab3-dev - C++ library for computational biology (development) librostlab3t64 - C++ library for computational biology Closes: 1047025 Changes: librostlab (1.0.20-14) unstable; urgency=medium . * Fix clean target Closes: #1047025 * Standards-Version: 4.7.0 (routine-update) Checksums-Sha1: 4bbbecbffa1cb3aef7bdfa7de4dc795a1bad95a1 982852 librostlab-doc_1.0.20-14_all.deb 37a1f30a761b925326a63734c331103359abc258 12516 librostlab3-dev_1.0.20-14_i386.deb 09ca60c22473523b08bd62ee595c04f34a6c33ae 2372 librostlab3t64-dbgsym_1.0.20-14_i386.deb bc544af20ad40e95abd854224367dc586101db6c 5084 librostlab3t64_1.0.20-14_i386.deb f183a8944b5c49caf09dbe316aee570b3ef16cab 10594 librostlab_1.0.20-14_i386.buildinfo Checksums-Sha256: a250adf3efcff25fd78102b7da8ea85223c1e4a12d2286b5bef4e4af9ba1adbf 982852 librostlab-doc_1.0.20-14_all.deb 58af75d912342cffcd556ebbc33884e700d627560bd3dec4accb8b2f7f869a01 12516 librostlab3-dev_1.0.20-14_i386.deb 194663a4184e943ef20cb0473a8115dfb16a2cdfed0a28abd83b3530fcfbe135 2372 librostlab3t64-dbgsym_1.0.20-14_i386.deb 324b1f7bebd58df24b7ec06b8f43caacf34fb3cec63e3d0abfc561fce2c682e9 5084 librostlab3t64_1.0.20-14_i386.deb f752030fdd9404b5b2f2debf9deb629abc07a2b3b8dc78b8a9db516f93f8d3b4 10594 librostlab_1.0.20-14_i386.buildinfo Files: 6438f8d93ffccafe6612a53930e128bd 982852 doc optional librostlab-doc_1.0.20-14_all.deb 61cfab0d1047efb6ef2da56817f77642 12516 libdevel optional librostlab3-dev_1.0.20-14_i386.deb fd20e89235b8322c2f4b4a03a9e0a7a2 2372 debug optional librostlab3t64-dbgsym_1.0.20-14_i386.deb 3c891adff4553afdda2f5a1a7fe1e699 5084 libs optional librostlab3t64_1.0.20-14_i386.deb 05b0a49aba880cd0f16760c4afa3cee7 10594 science optional librostlab_1.0.20-14_i386.buildinfo removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/librostlab_1.0.20-14.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/librostlab_1.0.20-14.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/librostlab_1.0.20-14.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/librostlab_1.0.20-14.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/dbd/unstable/i386/librostlab_1.0.20-14.diffoscope.html' removed '/var/lib/jenkins/userContent/reproducible/debian/dbdtxt/unstable/i386/librostlab_1.0.20-14.diffoscope.txt.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/dbdjson/unstable/i386/librostlab_1.0.20-14.diffoscope.json.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/i386/librostlab_1.0.20-14_i386.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/librostlab_1.0.20-14.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-04-02 12:50:26.911593595 +0000 +++ b2/build.log 2025-04-02 12:56:26.047342965 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue May 5 07:10:32 -12 2026 -I: pbuilder-time-stamp: 1778008232 +I: Current time: Thu Apr 3 02:50:31 +14 2025 +I: pbuilder-time-stamp: 1743598231 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -23,54 +23,86 @@ dpkg-source: info: unpacking librostlab_1.0.20-14.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/86953/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 2 12:50 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='667ac293e08f4e75b20e5ffe38dddc15' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='86953' - PS1='# ' - PS2='> ' + INVOCATION_ID=925993cb211147e1a61e74ad5e308056 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=58606 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_JwGM --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1 --logfile b1/build.log librostlab_1.0.20-14.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/pbuilderrc_bHn9 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2 --logfile b2/build.log librostlab_1.0.20-14.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos16-i386 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/86953/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -310,7 +342,7 @@ Get: 182 http://deb.debian.org/debian unstable/main i386 texlive-pictures all 2024.20250309-1 [17.0 MB] Get: 183 http://deb.debian.org/debian unstable/main i386 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Get: 184 http://deb.debian.org/debian unstable/main i386 texlive-plain-generic all 2024.20250309-2 [29.0 MB] -Fetched 259 MB in 7s (36.6 MB/s) +Fetched 259 MB in 4s (73.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19790 files and directories currently installed.) @@ -914,8 +946,8 @@ Setting up tzdata (2025b-1) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue May 5 19:11:18 UTC 2026. -Universal Time is now: Tue May 5 19:11:18 UTC 2026. +Local time is now: Wed Apr 2 12:51:37 UTC 2025. +Universal Time is now: Wed Apr 2 12:51:37 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... @@ -1101,7 +1133,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/librostlab-1.0.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librostlab_1.0.20-14_source.changes +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/librostlab-1.0.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../librostlab_1.0.20-14_source.changes dpkg-buildpackage: info: source package librostlab dpkg-buildpackage: info: source version 1.0.20-14 dpkg-buildpackage: info: source distribution unstable @@ -1460,7 +1496,7 @@ writing tag file... Running plantuml with JAVA... Running dot... -Generating dot graphs using 25 parallel threads... +Generating dot graphs using 14 parallel threads... Running dot for graph 1/66 Running dot for graph 2/66 Running dot for graph 3/66 @@ -2024,7 +2060,7 @@ sr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb> -Output written on refman.pdf (70 pages, 504543 bytes). +Output written on refman.pdf (70 pages, 504551 bytes). Transcript written on refman.log. This is makeindex, version 2.17 [TeX Live 2025/dev] (kpathsea + Thai support). Scanning input file refman.idx....done (213 entries accepted, 0 rejected). @@ -2277,12 +2313,12 @@ sr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb> -Output written on refman.pdf (79 pages, 538222 bytes). +Output written on refman.pdf (79 pages, 538231 bytes). Transcript written on refman.log. make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20/lib' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_build -Nlibrostlab-doc - make -j22 + make -j10 make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' make all-recursive make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20' @@ -2290,10 +2326,10 @@ make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make all-am make[4]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c -o librostlab_la-blosum62.lo `test -f 'blosum62.cpp' || echo './'`blosum62.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c -o librostlab_la-blosum62.lo `test -f 'blosum62.cpp' || echo './'`blosum62.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c blosum62.cpp -fPIC -DPIC -o .libs/librostlab_la-blosum62.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -c blosum62.cpp -o librostlab_la-blosum62.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=link g++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wall -Wl,-z,relro -Wl,-z,now -o librostlab.la -rpath /usr/lib/i386-linux-gnu librostlab_la-blosum62.lo +/bin/sh ../libtool --tag=CXX --mode=link g++ -Wall -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 3:0:0 -Wall -Wl,-z,relro -Wl,-z,now -o librostlab.la -rpath /usr/lib/i386-linux-gnu librostlab_la-blosum62.lo libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu/crti.o /usr/lib/gcc/i686-linux-gnu/14/crtbeginS.o .libs/librostlab_la-blosum62.o -L/usr/lib/gcc/i686-linux-gnu/14 -L/usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu -L/usr/lib/gcc/i686-linux-gnu/14/../../../../lib -L/lib/i386-linux-gnu -L/lib/../lib -L/usr/lib/i386-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/i686-linux-gnu/14/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/i686-linux-gnu/14/crtendS.o /usr/lib/gcc/i686-linux-gnu/14/../../../i386-linux-gnu/crtn.o -g -O2 -ffile-prefix-map=/build/reproducible-path/librostlab-1.0.20=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,librostlab.so.3 -o .libs/librostlab.so.3.0.0 libtool: link: (cd ".libs" && rm -f "librostlab.so.3" && ln -s "librostlab.so.3.0.0" "librostlab.so.3") libtool: link: (cd ".libs" && rm -f "librostlab.so" && ln -s "librostlab.so.3.0.0" "librostlab.so") @@ -2307,7 +2343,7 @@ make[2]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' make[1]: Leaving directory '/build/reproducible-path/librostlab-1.0.20' dh_auto_test - make -j22 check "TESTSUITEFLAGS=-j22 --verbose" VERBOSE=1 + make -j10 check "TESTSUITEFLAGS=-j10 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librostlab-1.0.20' Making check in lib make[2]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' @@ -2330,7 +2366,7 @@ make[3]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' make[4]: Entering directory '/build/reproducible-path/librostlab-1.0.20/lib' /usr/bin/mkdir -p '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' - /bin/bash ../libtool --mode=install /usr/bin/install -c librostlab.la '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' + /bin/sh ../libtool --mode=install /usr/bin/install -c librostlab.la '/build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu' libtool: install: /usr/bin/install -c .libs/librostlab.so.3.0.0 /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu/librostlab.so.3.0.0 libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so.3 || { rm -f librostlab.so.3 && ln -s librostlab.so.3.0.0 librostlab.so.3; }; }) libtool: install: (cd /build/reproducible-path/librostlab-1.0.20/debian/tmp/usr/lib/i386-linux-gnu && { ln -s -f librostlab.so.3.0.0 librostlab.so || { rm -f librostlab.so && ln -s librostlab.so.3.0.0 librostlab.so; }; }) @@ -2409,9 +2445,9 @@ dh_md5sums dh_builddeb dpkg-deb: building package 'librostlab3t64' in '../librostlab3t64_1.0.20-14_i386.deb'. -dpkg-deb: building package 'librostlab3t64-dbgsym' in '../librostlab3t64-dbgsym_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab3-dev' in '../librostlab3-dev_1.0.20-14_i386.deb'. dpkg-deb: building package 'librostlab-doc' in '../librostlab-doc_1.0.20-14_all.deb'. +dpkg-deb: building package 'librostlab3t64-dbgsym' in '../librostlab3t64-dbgsym_1.0.20-14_i386.deb'. dpkg-genbuildinfo --build=binary -O../librostlab_1.0.20-14_i386.buildinfo dpkg-genchanges --build=binary -O../librostlab_1.0.20-14_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -2419,12 +2455,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/58606/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/86953 and its subdirectories -I: Current time: Tue May 5 07:13:24 -12 2026 -I: pbuilder-time-stamp: 1778008404 +I: removing directory /srv/workspace/pbuilder/58606 and its subdirectories +I: Current time: Thu Apr 3 02:56:24 +14 2025 +I: pbuilder-time-stamp: 1743598584 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/librostlab_1.0.20-14.diff: 72.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/librostlab_1.0.20-14.diff.gz b2/build.log: 82.8% -- replaced with stdout Compressing the 1st log... b1/build.log: 83.1% -- replaced with stdout Wed Apr 2 12:56:27 UTC 2025 I: diffoscope 293 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_librostlab_unstable_i386_1743598587 + touch /var/log/reproducible-builds/diffoscope_stamp_librostlab_unstable_i386_1743598587 + RESULT=0 + systemd-run '--description=diffoscope on librostlab/1.0.20-14 in unstable/i386' --slice=rb-build-diffoscope.slice -u rb-diffoscope-i386_10-49621 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S --run-session -c jenkins-reproducible-unstable-diffoscope-66213040-7d13-4e48-9003-85c907e4bfdb -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/dbd-tmp-r07jp4L ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/librostlab_1.0.20-14.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/librostlab_1.0.20-14.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/librostlab_1.0.20-14.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1/librostlab_1.0.20-14_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2/librostlab_1.0.20-14_i386.changes' + false + set +x Running as unit: rb-diffoscope-i386_10-49621.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/librostlab_1.0.20-14.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/librostlab_1.0.20-14.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/librostlab_1.0.20-14.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b1/librostlab_1.0.20-14_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.j3CwPu8S/b2/librostlab_1.0.20-14_i386.changes ## close_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.gzip.GzipContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 3.883s) 2.037s 11 calls dumppdf 1.562s 7 calls diff 0.176s 11 calls pdftotext 0.086s 6 calls xz 0.013s 2 calls gzip 0.004s 1 call cmp 0.004s 1 call cmp (external) 0.001s 13 calls cmp (internal) ## compare_files (cumulative) (total time: 46.740s) 7.979s 1 call abc.DotChangesFile 7.962s 1 call abc.DebFile 7.939s 2 calls abc.XzFile 7.813s 1 call abc.DebDataTarFile 7.512s 1 call abc.GzipFile 7.492s 1 call abc.PdfFile 0.033s 1 call abc.TarFile 0.010s 1 call abc.Md5sumsFile ## container_extract (total time: 0.192s) 0.086s 6 calls diffoscope.comparators.xz.XzContainer 0.085s 514 calls diffoscope.comparators.deb.DebTarContainer 0.014s 2 calls diffoscope.comparators.gzip.GzipContainer 0.005s 8 calls diffoscope.comparators.deb.DebContainer 0.002s 6 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.503s) 0.503s 12 calls linediff ## has_same_content_as (total time: 0.006s) 0.004s 1 call abc.DebDataTarFile 0.000s 4 calls abc.DebFile 0.000s 2 calls abc.Md5sumsFile 0.000s 2 calls abc.TextFile 0.000s 1 call diffoscope.comparators.binary.FilesystemFile 0.000s 2 calls abc.XzFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 1 call abc.TarFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call abc.GzipFile 0.000s 1 call abc.PdfFile ## main (total time: 9.335s) 9.334s 2 calls outputs 0.001s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer 0.000s 2 calls diffoscope.comparators.gzip.GzipContainer ## output (total time: 1.047s) 1.037s 1 call html 0.005s 1 call json 0.005s 1 call text ## recognizes (total time: 0.088s) 0.041s 584 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.023s 12 calls diffoscope.comparators.binary.FilesystemFile 0.018s 364 calls diffoscope.comparators.utils.archive.ArchiveMember 0.006s 216 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.355s) 0.355s 16 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 9.620s CPU time consumed: 10.333s Wed Apr 2 12:56:37 UTC 2025 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Wed Apr 2 12:56:37 UTC 2025 E: librostlab failed to build reproducibly in unstable on i386. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-04-02 12:56:38] INFO: Starting at 2025-04-02 12:56:38.965980 [2025-04-02 12:56:39] INFO: Generating the pages of 1 package(s) [2025-04-02 12:56:39] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/i386/librostlab didn't produce a buildlog, even though it has been built. [2025-04-02 12:56:39] INFO: Finished at 2025-04-02 12:56:39.537643, took: 0:00:00.571670 Wed Apr 2 12:56:39 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/i386/librostlab.html Wed Apr 2 12:56:39 UTC 2025 I: Submitting .buildinfo files to external archives: Wed Apr 2 12:56:39 UTC 2025 I: Submitting 12K b1/librostlab_1.0.20-14_i386.buildinfo.asc https://buildinfo.debian.net/f183a8944b5c49caf09dbe316aee570b3ef16cab/librostlab_1.0.20-14_all Wed Apr 2 12:56:40 UTC 2025 I: Submitting 12K b2/librostlab_1.0.20-14_i386.buildinfo.asc https://buildinfo.debian.net/38a719f83d9c60dc2ea9ba06681e1279a5b1b62c/librostlab_1.0.20-14_all Wed Apr 2 12:56:41 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Apr 2 12:56:41 UTC 2025 I: Done submitting .buildinfo files. Wed Apr 2 12:56:41 UTC 2025 I: Removing signed librostlab_1.0.20-14_i386.buildinfo.asc files: removed './b1/librostlab_1.0.20-14_i386.buildinfo.asc' removed './b2/librostlab_1.0.20-14_i386.buildinfo.asc' 1743598601 i386 unstable librostlab Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/librostlab_1.0.20-14.rbuild.log: 81.7% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/librostlab_1.0.20-14.rbuild.log.gz [2025-04-02 12:56:41] INFO: Starting at 2025-04-02 12:56:41.830718 [2025-04-02 12:56:41] INFO: Generating the pages of 1 package(s) [2025-04-02 12:56:42] INFO: Finished at 2025-04-02 12:56:42.568190, took: 0:00:00.737478 All cleanup done. Wed Apr 2 12:56:42 UTC 2025 - total duration: 0h 9m 12s. Wed Apr 2 12:56:42 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-g5sRR3A1, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 9min 16.652s CPU time consumed: 8.121s