Running as unit: rb-build-i386_11-33960.service ==================================================================================== Fri Nov 22 16:36:10 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_11) on jenkins, called using "ionos6-i386 ionos2-i386" as arguments. Fri Nov 22 16:36:10 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-1JaU6UE1" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 16:36:11 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos6-i386.debian.net is marked as down. Fri Nov 22 16:36:11 UTC 2024 - checking via ssh if ionos6-i386.debian.net is up. removed '/tmp/read-only-fs-test-olTET7' Fri Nov 22 16:36:11 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Fri Nov 22 16:36:11 UTC 2024 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-fAhTLp' ok, let's check if skewer is building anywhere yet… ok, skewer is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of skewer in trixie on i386 on jenkins now. 1st build will be done on ionos6-i386.debian.net. 2nd build will be done on ionos2-i386.debian.net. ============================================================================= Fri Nov 22 16:36:16 UTC 2024 I: starting to build skewer/trixie/i386 on jenkins on '2024-11-22 16:36' Fri Nov 22 16:36:16 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_11/33960/console.log 1732293376 i386 trixie skewer Fri Nov 22 16:36:16 UTC 2024 I: Downloading source for trixie/skewer=0.2.2-6 --2024-11-22 16:36:17-- http://deb.debian.org/debian/pool/main/s/skewer/skewer_0.2.2-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1941 (1.9K) [text/prs.lines.tag] Saving to: ‘skewer_0.2.2-6.dsc’ 0K . 100% 283M=0s 2024-11-22 16:36:17 (283 MB/s) - ‘skewer_0.2.2-6.dsc’ saved [1941/1941] --2024-11-22 16:36:17-- http://deb.debian.org/debian/pool/main/s/skewer/skewer_0.2.2-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1941 (1.9K) [text/prs.lines.tag] Saving to: ‘skewer_0.2.2-6.dsc’ 0K . 100% 283M=0s 2024-11-22 16:36:17 (283 MB/s) - ‘skewer_0.2.2-6.dsc’ saved [1941/1941] Fri Nov 22 16:36:17 UTC 2024 I: skewer_0.2.2-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: skewer Binary: skewer Architecture: any Version: 0.2.2-6 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/relipmoc/skewer Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/skewer Vcs-Git: https://salsa.debian.org/med-team/skewer.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: skewer deb science optional arch=any Checksums-Sha1: 110d99ccee1e420c06b0848a9281a5b509aa32bd 36382 skewer_0.2.2.orig.tar.gz f6b1939c59dd2009a1414218b51577e654648973 21760 skewer_0.2.2-6.debian.tar.xz Checksums-Sha256: bc37afccdf55de047502b87fe56d537cdf78674ccaec1a401b2d29552d6b2dfc 36382 skewer_0.2.2.orig.tar.gz 7f803eb0fcf8e686dba035f1a4650671dc7491e54f34a37166f523dd72f85f54 21760 skewer_0.2.2-6.debian.tar.xz Files: 082f62f7e1ff27cd1b7e66269d46653e 36382 skewer_0.2.2.orig.tar.gz 758e814eca486d235c243ff9e0825a8e 21760 skewer_0.2.2-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmF+q5QSHG5pbGVzaEBk ZWJpYW4ub3JnAAoJEAC650s0M2nxabYQAImxcUKepU7j25K1tLT2ECazMAxMz1ZH Herdl6/89IBfVfIyiqlD2U9wh66L28hukmRZP7gwZ0fivgivTZDD25uSDvhuaETU iOHncD5vN8bNLZTVMGW6env4m6j+jAujLNHgtGJhPC7dNazbfHWySBNmFkAgPimh MyAUhQf+8YtP+0XIwlW7Hfb+GrWczr7wq7cqFTxU4n26KDWR+3k2cpan4WwCnEKP ygHUut80G65cR1VuQM9uKj2QDdUyni9JbtwRlUz3fF+MUFMrIn7tfE6bnaBdkdEK 8VxGGHwYotD68yUBMO/qxgF9Q2/621bzKPmG/BGojVNaLf6Ui0KQtkQhym4gZwfK raiMqCOwViLMneaXTui+DISpahADTk1VOvVIynf3fUG6Dl2kGmE299kN8SjEknzF LTo21yOjam7EbzoqY2wLPEUgCblRFog5xvn04/fnddmLw5lzk179lrFGmTRWNqk2 TPJ5dl+CwOTGZK3c93PcD57++z3CQygh/h6MTQhAWUoDq9aZgX/74+GdCzT7rV5I jhBVE91dUI3rajDhU4h9iBbTCcf+iRQtTHFVELmzg3gKIdsuyOQ08oo4D7gkFF9a 9XFDq8mm9HT2GaLwZa4Rl24xVDOkWUUAXjRMO1pApKr7joUHSD02s9V6sBe+e92o 3gk3/rzgWk56 =vj6E -----END PGP SIGNATURE----- Fri Nov 22 16:36:17 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 16:36:17 UTC 2024 I: Starting 1st build on remote node ionos6-i386.debian.net. Fri Nov 22 16:36:17 UTC 2024 I: Preparing to do remote build '1' on ionos6-i386.debian.net. Fri Nov 22 16:36:17 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos6-i386.debian.net is marked as down. Fri Nov 22 16:36:17 UTC 2024 - checking via ssh if ionos6-i386.debian.net is up. removed '/tmp/read-only-fs-test-jnyGLF' ==================================================================================== Thu Dec 25 22:59:18 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos6-i386, called using "1 skewer trixie /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ 0.2.2-6" as arguments. Thu Dec 25 22:59:18 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-cFgvow3w" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Dec 25 22:59:19 UTC 2025 I: Downloading source for trixie/skewer=0.2.2-6 Reading package lists... NOTICE: 'skewer' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/skewer.git Please use: git clone https://salsa.debian.org/med-team/skewer.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 60.1 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (dsc) [1941 B] Get:2 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (tar) [36.4 kB] Get:3 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (diff) [21.8 kB] Fetched 60.1 kB in 0s (2342 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'skewer' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/skewer.git Please use: git clone https://salsa.debian.org/med-team/skewer.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 60.1 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (dsc) [1941 B] Get:2 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (tar) [36.4 kB] Get:3 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (diff) [21.8 kB] Fetched 60.1 kB in 0s (2342 kB/s) Download complete and in download only mode ============================================================================= Building skewer in trixie on i386 on ionos6-i386 now. Date: Thu Dec 25 23:59:24 CET 2025 Date UTC: Thu Dec 25 22:59:24 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 10:59:25 -12 2025 I: pbuilder-time-stamp: 1766703565 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [skewer_0.2.2-6.dsc] I: copying [./skewer_0.2.2.orig.tar.gz] I: copying [./skewer_0.2.2-6.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Oct 31 14:43:32 2021 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "nilesh@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./skewer_0.2.2-6.dsc: no acceptable signature found dpkg-source: info: extracting skewer in skewer-0.2.2 dpkg-source: info: unpacking skewer_0.2.2.orig.tar.gz dpkg-source: info: unpacking skewer_0.2.2-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixMakefile.patch dpkg-source: info: applying gcc11.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/115429/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='cc285042255244aa876a04bd2e5c6db4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='115429' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_PR2o --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1 --logfile b1/build.log skewer_0.2.2-6.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos6-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/115429/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Fetched 20.1 MB in 0s (82.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/skewer-0.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../skewer_0.2.2-6_source.changes dpkg-buildpackage: info: source package skewer dpkg-buildpackage: info: source version 0.2.2-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean make -j22 clean make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' rm -rf src/main.o src/parameter.o src/matrix.o src/fastq.o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/skewer.substvars debian/files rm -fr -- debian/skewer/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j22 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/main.cpp -o src/main.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/parameter.cpp -o src/parameter.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/matrix.cpp -o src/matrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/fastq.cpp -o src/fastq.o src/fastq.cpp: In function 'int64 gzsize(const char*)': src/fastq.cpp:230:92: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:230:110: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:230:104: warning: division by zero [-Wdiv-by-zero] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ src/fastq.cpp:230:124: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:219:30: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 219 | fread(buffer, 1, 4, fp); | ~~~~~^~~~~~~~~~~~~~~~~~ src/main.cpp: In function 'void cStats::printTime(const char*, FILE*, int)': src/main.cpp:501:62: warning: '%d' directive writing between 1 and 11 bytes into a region of size between 0 and 12 [-Wformat-overflow=] 501 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~ In member function 'char* cStats::timeStamp()', inlined from 'void cStats::printTime(const char*, FILE*, int)' at src/main.cpp:511:18: src/main.cpp:501:33: note: directive argument in the range [-2147481748, 2147483647] 501 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from src/main.cpp:32: In function 'int sprintf(char*, const char*, ...)', inlined from 'char* cStats::timeStamp()' at src/main.cpp:501:10, inlined from 'void cStats::printTime(const char*, FILE*, int)' at src/main.cpp:511:18: /usr/include/i386-linux-gnu/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 16 and 67 bytes into a destination of size 26 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -Wl,-z,relro -Wl,-z,now -pthread src/main.o src/parameter.o src/matrix.o src/fastq.o -o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_auto_test rm -fr -- /tmp/dh-xdg-rundir-NfnJy5RX create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/skewer.substvars rm -fr -- debian/.debhelper/generated/skewer/ debian/skewer/ debian/tmp/ dh_install install -m0755 -d debian/skewer/usr/bin cp --reflink=auto -a ./skewer debian/skewer/usr/bin/ dh_installdocs install -m0755 -d debian/skewer/usr/share/doc/skewer install -m0755 -d debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./README.md debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/README.test debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/tests/run-unit-test debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/tests/get-test-data debian/skewer/usr/share/doc/skewer chmod -R u\+rw,go=rX debian/skewer/usr/share/doc install -p -m0644 debian/copyright debian/skewer/usr/share/doc/skewer/copyright dh_installchangelogs install -m0755 -d debian/skewer/usr/share/doc/skewer install -p -m0644 debian/.debhelper/generated/skewer/dh_installchangelogs.dch.trimmed debian/skewer/usr/share/doc/skewer/changelog.Debian dh_installexamples install -m0755 -d debian/skewer/usr/share/doc/skewer/examples cp --reflink=auto -a ./debian/tests/data/adapters.fa debian/skewer/usr/share/doc/skewer/examples cp --reflink=auto -a ./debian/tests/data/data.fastq.gz debian/skewer/usr/share/doc/skewer/examples dh_perl dh_link dh_strip_nondeterminism Using 1635691247 as canonical time Normalizing debian/skewer/usr/share/doc/skewer/examples/data.fastq.gz using File::StripNondeterminism::handlers::gzip dh_compress cd debian/skewer chmod a-x usr/share/doc/skewer/changelog.Debian gzip -9nf usr/share/doc/skewer/changelog.Debian cd '/build/reproducible-path/skewer-0.2.2' dh_fixperms find debian/skewer ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/skewer/usr/share/doc -type f -a -true -a ! -regex 'debian/skewer/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/skewer/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/skewer -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/skewer/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/skewer/usr/bin/skewer dh_strip -a install -m0755 -d debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8 objcopy --only-keep-debug --compress-debug-sections debian/skewer/usr/bin/skewer debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug strip --remove-section=.comment --remove-section=.note debian/skewer/usr/bin/skewer objcopy --add-gnu-debuglink debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug debian/skewer/usr/bin/skewer install -m0755 -d debian/.debhelper/skewer/dbgsym-root/usr/share/doc ln -s skewer debian/.debhelper/skewer/dbgsym-root/usr/share/doc/skewer-dbgsym install -m0755 -d debian/.debhelper/skewer dh_makeshlibs -a rm -f debian/skewer/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/skewer/DEBIAN dpkg-shlibdeps -Tdebian/skewer.substvars debian/skewer/usr/bin/skewer dh_installdeb install -m0755 -d debian/skewer/DEBIAN dh_gencontrol install -m0755 -d debian/skewer/DEBIAN echo misc:Depends= >> debian/skewer.substvars echo misc:Pre-Depends= >> debian/skewer.substvars install -m0755 -d debian/.debhelper/skewer/dbgsym-root/DEBIAN dpkg-gencontrol -pskewer -ldebian/changelog -Tdebian/skewer.substvars -cdebian/control -Pdebian/.debhelper/skewer/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=skewer-dbgsym "-DDepends=skewer (= \${binary:Version})" "-DDescription=debug symbols for skewer" -DBuild-Ids=d8a8c8d72e55fad8a6db620801f17d3e2dd61686 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/DEBIAN/control dpkg-gencontrol -pskewer -ldebian/changelog -Tdebian/skewer.substvars -cdebian/control -Pdebian/skewer chmod 0644 -- debian/skewer/DEBIAN/control dh_md5sums install -m0755 -d debian/skewer/DEBIAN cd debian/skewer >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/skewer/DEBIAN/md5sums install -m0755 -d debian/.debhelper/skewer/dbgsym-root/DEBIAN cd debian/.debhelper/skewer/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/skewer .. dpkg-deb --root-owner-group --build debian/.debhelper/skewer/dbgsym-root .. dpkg-deb: building package 'skewer-dbgsym' in '../skewer-dbgsym_0.2.2-6_i386.deb'. dpkg-deb: building package 'skewer' in '../skewer_0.2.2-6_i386.deb'. dpkg-genbuildinfo --build=binary -O../skewer_0.2.2-6_i386.buildinfo dpkg-genchanges --build=binary -O../skewer_0.2.2-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/115429 and its subdirectories I: Current time: Thu Dec 25 11:00:07 -12 2025 I: pbuilder-time-stamp: 1766703607 Thu Dec 25 23:00:07 UTC 2025 I: Signing ./b1/skewer_0.2.2-6_i386.buildinfo as skewer_0.2.2-6_i386.buildinfo.asc Thu Dec 25 23:00:07 UTC 2025 I: Signed ./b1/skewer_0.2.2-6_i386.buildinfo as ./b1/skewer_0.2.2-6_i386.buildinfo.asc Thu Dec 25 23:00:07 UTC 2025 - build #1 for skewer/trixie/i386 on ionos6-i386 done. Starting cleanup. All cleanup done. Thu Dec 25 23:00:07 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-cFgvow3w, removing. /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 16:37 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 16:36 b2 -rw------- 1 jenkins jenkins 3026 Nov 22 16:36 rbuildlog.ihWTgj3 -rw-r--r-- 1 jenkins jenkins 1941 Oct 31 2021 skewer_0.2.2-6.dsc /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1: total 780 -rw-r--r-- 1 jenkins jenkins 27735 Nov 22 16:37 build.log -rw-r--r-- 1 jenkins jenkins 617428 Nov 22 16:37 skewer-dbgsym_0.2.2-6_i386.deb -rw-r--r-- 1 jenkins jenkins 21760 Nov 22 16:37 skewer_0.2.2-6.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1941 Nov 22 16:37 skewer_0.2.2-6.dsc -rw-r--r-- 1 jenkins jenkins 4874 Nov 22 16:37 skewer_0.2.2-6_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 5756 Nov 22 16:37 skewer_0.2.2-6_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1351 Nov 22 16:37 skewer_0.2.2-6_i386.changes -rw-r--r-- 1 jenkins jenkins 97384 Nov 22 16:37 skewer_0.2.2-6_i386.deb -rw-r--r-- 1 jenkins jenkins 1218 Nov 22 16:37 skewer_0.2.2-6_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2: total 0 Fri Nov 22 16:37:08 UTC 2024 I: Deleting $TMPDIR on ionos6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 10:59:25 -12 2025 I: pbuilder-time-stamp: 1766703565 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [skewer_0.2.2-6.dsc] I: copying [./skewer_0.2.2.orig.tar.gz] I: copying [./skewer_0.2.2-6.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Oct 31 14:43:32 2021 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "nilesh@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./skewer_0.2.2-6.dsc: no acceptable signature found dpkg-source: info: extracting skewer in skewer-0.2.2 dpkg-source: info: unpacking skewer_0.2.2.orig.tar.gz dpkg-source: info: unpacking skewer_0.2.2-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixMakefile.patch dpkg-source: info: applying gcc11.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/115429/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='cc285042255244aa876a04bd2e5c6db4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='115429' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_PR2o --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1 --logfile b1/build.log skewer_0.2.2-6.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos6-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/115429/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Fetched 20.1 MB in 0s (82.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/skewer-0.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../skewer_0.2.2-6_source.changes dpkg-buildpackage: info: source package skewer dpkg-buildpackage: info: source version 0.2.2-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean make -j22 clean make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' rm -rf src/main.o src/parameter.o src/matrix.o src/fastq.o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/skewer.substvars debian/files rm -fr -- debian/skewer/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j22 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/main.cpp -o src/main.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/parameter.cpp -o src/parameter.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/matrix.cpp -o src/matrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/fastq.cpp -o src/fastq.o src/fastq.cpp: In function 'int64 gzsize(const char*)': src/fastq.cpp:230:92: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:230:110: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:230:104: warning: division by zero [-Wdiv-by-zero] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ src/fastq.cpp:230:124: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:219:30: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 219 | fread(buffer, 1, 4, fp); | ~~~~~^~~~~~~~~~~~~~~~~~ src/main.cpp: In function 'void cStats::printTime(const char*, FILE*, int)': src/main.cpp:501:62: warning: '%d' directive writing between 1 and 11 bytes into a region of size between 0 and 12 [-Wformat-overflow=] 501 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~ In member function 'char* cStats::timeStamp()', inlined from 'void cStats::printTime(const char*, FILE*, int)' at src/main.cpp:511:18: src/main.cpp:501:33: note: directive argument in the range [-2147481748, 2147483647] 501 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from src/main.cpp:32: In function 'int sprintf(char*, const char*, ...)', inlined from 'char* cStats::timeStamp()' at src/main.cpp:501:10, inlined from 'void cStats::printTime(const char*, FILE*, int)' at src/main.cpp:511:18: /usr/include/i386-linux-gnu/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 16 and 67 bytes into a destination of size 26 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -Wl,-z,relro -Wl,-z,now -pthread src/main.o src/parameter.o src/matrix.o src/fastq.o -o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_auto_test rm -fr -- /tmp/dh-xdg-rundir-NfnJy5RX create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/skewer.substvars rm -fr -- debian/.debhelper/generated/skewer/ debian/skewer/ debian/tmp/ dh_install install -m0755 -d debian/skewer/usr/bin cp --reflink=auto -a ./skewer debian/skewer/usr/bin/ dh_installdocs install -m0755 -d debian/skewer/usr/share/doc/skewer install -m0755 -d debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./README.md debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/README.test debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/tests/run-unit-test debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/tests/get-test-data debian/skewer/usr/share/doc/skewer chmod -R u\+rw,go=rX debian/skewer/usr/share/doc install -p -m0644 debian/copyright debian/skewer/usr/share/doc/skewer/copyright dh_installchangelogs install -m0755 -d debian/skewer/usr/share/doc/skewer install -p -m0644 debian/.debhelper/generated/skewer/dh_installchangelogs.dch.trimmed debian/skewer/usr/share/doc/skewer/changelog.Debian dh_installexamples install -m0755 -d debian/skewer/usr/share/doc/skewer/examples cp --reflink=auto -a ./debian/tests/data/adapters.fa debian/skewer/usr/share/doc/skewer/examples cp --reflink=auto -a ./debian/tests/data/data.fastq.gz debian/skewer/usr/share/doc/skewer/examples dh_perl dh_link dh_strip_nondeterminism Using 1635691247 as canonical time Normalizing debian/skewer/usr/share/doc/skewer/examples/data.fastq.gz using File::StripNondeterminism::handlers::gzip dh_compress cd debian/skewer chmod a-x usr/share/doc/skewer/changelog.Debian gzip -9nf usr/share/doc/skewer/changelog.Debian cd '/build/reproducible-path/skewer-0.2.2' dh_fixperms find debian/skewer ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/skewer/usr/share/doc -type f -a -true -a ! -regex 'debian/skewer/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/skewer/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/skewer -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/skewer/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/skewer/usr/bin/skewer dh_strip -a install -m0755 -d debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8 objcopy --only-keep-debug --compress-debug-sections debian/skewer/usr/bin/skewer debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug strip --remove-section=.comment --remove-section=.note debian/skewer/usr/bin/skewer objcopy --add-gnu-debuglink debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug debian/skewer/usr/bin/skewer install -m0755 -d debian/.debhelper/skewer/dbgsym-root/usr/share/doc ln -s skewer debian/.debhelper/skewer/dbgsym-root/usr/share/doc/skewer-dbgsym install -m0755 -d debian/.debhelper/skewer dh_makeshlibs -a rm -f debian/skewer/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/skewer/DEBIAN dpkg-shlibdeps -Tdebian/skewer.substvars debian/skewer/usr/bin/skewer dh_installdeb install -m0755 -d debian/skewer/DEBIAN dh_gencontrol install -m0755 -d debian/skewer/DEBIAN echo misc:Depends= >> debian/skewer.substvars echo misc:Pre-Depends= >> debian/skewer.substvars install -m0755 -d debian/.debhelper/skewer/dbgsym-root/DEBIAN dpkg-gencontrol -pskewer -ldebian/changelog -Tdebian/skewer.substvars -cdebian/control -Pdebian/.debhelper/skewer/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=skewer-dbgsym "-DDepends=skewer (= \${binary:Version})" "-DDescription=debug symbols for skewer" -DBuild-Ids=d8a8c8d72e55fad8a6db620801f17d3e2dd61686 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/DEBIAN/control dpkg-gencontrol -pskewer -ldebian/changelog -Tdebian/skewer.substvars -cdebian/control -Pdebian/skewer chmod 0644 -- debian/skewer/DEBIAN/control dh_md5sums install -m0755 -d debian/skewer/DEBIAN cd debian/skewer >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/skewer/DEBIAN/md5sums install -m0755 -d debian/.debhelper/skewer/dbgsym-root/DEBIAN cd debian/.debhelper/skewer/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/skewer .. dpkg-deb --root-owner-group --build debian/.debhelper/skewer/dbgsym-root .. dpkg-deb: building package 'skewer-dbgsym' in '../skewer-dbgsym_0.2.2-6_i386.deb'. dpkg-deb: building package 'skewer' in '../skewer_0.2.2-6_i386.deb'. dpkg-genbuildinfo --build=binary -O../skewer_0.2.2-6_i386.buildinfo dpkg-genchanges --build=binary -O../skewer_0.2.2-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/115429 and its subdirectories I: Current time: Thu Dec 25 11:00:07 -12 2025 I: pbuilder-time-stamp: 1766703607 Fri Nov 22 16:37:08 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos2-i386.debian.net. Fri Nov 22 16:37:08 UTC 2024 I: Preparing to do remote build '2' on ionos2-i386.debian.net. Fri Nov 22 16:37:09 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Fri Nov 22 16:37:09 UTC 2024 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-630i7F' ==================================================================================== Fri Nov 22 16:37:09 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos2-i386, called using "2 skewer trixie /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ 0.2.2-6" as arguments. Fri Nov 22 16:37:09 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-YXc1DBQM" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri Nov 22 16:37:09 UTC 2024 I: Downloading source for trixie/skewer=0.2.2-6 Reading package lists... NOTICE: 'skewer' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/skewer.git Please use: git clone https://salsa.debian.org/med-team/skewer.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 60.1 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (dsc) [1941 B] Get:2 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (tar) [36.4 kB] Get:3 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (diff) [21.8 kB] Fetched 60.1 kB in 0s (1160 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'skewer' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/skewer.git Please use: git clone https://salsa.debian.org/med-team/skewer.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 60.1 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (dsc) [1941 B] Get:2 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (tar) [36.4 kB] Get:3 http://deb.debian.org/debian trixie/main skewer 0.2.2-6 (diff) [21.8 kB] Fetched 60.1 kB in 0s (1160 kB/s) Download complete and in download only mode ============================================================================= Re-Building skewer in trixie on i386 on ionos2-i386 now. Date: Fri Nov 22 17:37:10 CET 2024 Date UTC: Fri Nov 22 16:37:10 UTC 2024 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_tgw3 + case ${ARCH} in + let NUM_CPU-=3 + case $ARCH in + locale=de_CH + language=de + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' skewer = debian-installer -o skewer = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' skewer = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_tgw3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2 --logfile b2/build.log skewer_0.2.2-6.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 23 06:37:10 +14 2024 I: pbuilder-time-stamp: 1732293430 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [skewer_0.2.2-6.dsc] I: copying [./skewer_0.2.2.orig.tar.gz] I: copying [./skewer_0.2.2-6.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Oct 31 14:43:32 2021 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "nilesh@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./skewer_0.2.2-6.dsc: no acceptable signature found dpkg-source: info: extracting skewer in skewer-0.2.2 dpkg-source: info: unpacking skewer_0.2.2.orig.tar.gz dpkg-source: info: unpacking skewer_0.2.2-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixMakefile.patch dpkg-source: info: applying gcc11.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D01_modify_environment starting debug: Running on ionos2-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Nov 22 16:37 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=ebb816ae40514cf6a924ad2ff13c18b5 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=15031 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_tgw3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2 --logfile b2/build.log skewer_0.2.2-6.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Fetched 20.1 MB in 0s (69.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/15031/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/15031/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/skewer-0.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../skewer_0.2.2-6_source.changes dpkg-buildpackage: info: source package skewer dpkg-buildpackage: info: source version 0.2.2-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean make -j10 clean make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' rm -rf src/main.o src/parameter.o src/matrix.o src/fastq.o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/skewer.substvars debian/files rm -fr -- debian/skewer/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j10 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/main.cpp -o src/main.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/parameter.cpp -o src/parameter.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/matrix.cpp -o src/matrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/fastq.cpp -o src/fastq.o src/fastq.cpp: In function 'int64 gzsize(const char*)': src/fastq.cpp:230:92: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:230:110: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:230:104: warning: division by zero [-Wdiv-by-zero] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ src/fastq.cpp:230:124: warning: left shift count >= width of type [-Wshift-count-overflow] 230 | file_length += (((2 * compress_length) - file_length + (1L << 32) - 1) / (1L << 32)) * (1L << 32); | ~~~^~~~~ src/fastq.cpp:219:30: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 219 | fread(buffer, 1, 4, fp); | ~~~~~^~~~~~~~~~~~~~~~~~ src/main.cpp: In function 'void cStats::printTime(const char*, FILE*, int)': src/main.cpp:501:62: warning: '%d' directive writing between 1 and 11 bytes into a region of size between 0 and 12 [-Wformat-overflow=] 501 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~ In member function 'char* cStats::timeStamp()', inlined from 'void cStats::printTime(const char*, FILE*, int)' at src/main.cpp:511:18: src/main.cpp:501:33: note: directive argument in the range [-2147481748, 2147483647] 501 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:970, from src/main.cpp:32: In function 'int sprintf(char*, const char*, ...)', inlined from 'char* cStats::timeStamp()' at src/main.cpp:501:10, inlined from 'void cStats::printTime(const char*, FILE*, int)' at src/main.cpp:511:18: /usr/include/i386-linux-gnu/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output between 16 and 67 bytes into a destination of size 26 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -Wl,-z,relro -Wl,-z,now -pthread src/main.o src/parameter.o src/matrix.o src/fastq.o -o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_auto_test rm -fr -- /tmp/dh-xdg-rundir-O4B7GX3Z create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/skewer.substvars rm -fr -- debian/.debhelper/generated/skewer/ debian/skewer/ debian/tmp/ dh_install install -m0755 -d debian/skewer/usr/bin cp --reflink=auto -a ./skewer debian/skewer/usr/bin/ dh_installdocs install -m0755 -d debian/skewer/usr/share/doc/skewer install -m0755 -d debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./README.md debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/README.test debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/tests/run-unit-test debian/skewer/usr/share/doc/skewer cp --reflink=auto -a ./debian/tests/get-test-data debian/skewer/usr/share/doc/skewer chmod -R u\+rw,go=rX debian/skewer/usr/share/doc install -p -m0644 debian/copyright debian/skewer/usr/share/doc/skewer/copyright dh_installchangelogs install -m0755 -d debian/skewer/usr/share/doc/skewer install -p -m0644 debian/.debhelper/generated/skewer/dh_installchangelogs.dch.trimmed debian/skewer/usr/share/doc/skewer/changelog.Debian dh_installexamples install -m0755 -d debian/skewer/usr/share/doc/skewer/examples cp --reflink=auto -a ./debian/tests/data/adapters.fa debian/skewer/usr/share/doc/skewer/examples cp --reflink=auto -a ./debian/tests/data/data.fastq.gz debian/skewer/usr/share/doc/skewer/examples dh_perl dh_link dh_strip_nondeterminism Using 1635691247 as canonical time Normalizing debian/skewer/usr/share/doc/skewer/examples/data.fastq.gz using File::StripNondeterminism::handlers::gzip dh_compress cd debian/skewer chmod a-x usr/share/doc/skewer/changelog.Debian gzip -9nf usr/share/doc/skewer/changelog.Debian cd '/build/reproducible-path/skewer-0.2.2' dh_fixperms find debian/skewer ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/skewer/usr/share/doc -type f -a -true -a ! -regex 'debian/skewer/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/skewer/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/skewer -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/skewer/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing dh_dwz -a dwz -- debian/skewer/usr/bin/skewer dh_strip -a install -m0755 -d debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8 objcopy --only-keep-debug --compress-debug-sections debian/skewer/usr/bin/skewer debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug strip --remove-section=.comment --remove-section=.note debian/skewer/usr/bin/skewer objcopy --add-gnu-debuglink debian/.debhelper/skewer/dbgsym-root/usr/lib/debug/.build-id/d8/a8c8d72e55fad8a6db620801f17d3e2dd61686.debug debian/skewer/usr/bin/skewer install -m0755 -d debian/.debhelper/skewer/dbgsym-root/usr/share/doc ln -s skewer debian/.debhelper/skewer/dbgsym-root/usr/share/doc/skewer-dbgsym install -m0755 -d debian/.debhelper/skewer dh_makeshlibs -a rm -f debian/skewer/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/skewer/DEBIAN dpkg-shlibdeps -Tdebian/skewer.substvars debian/skewer/usr/bin/skewer dh_installdeb install -m0755 -d debian/skewer/DEBIAN dh_gencontrol install -m0755 -d debian/skewer/DEBIAN echo misc:Depends= >> debian/skewer.substvars echo misc:Pre-Depends= >> debian/skewer.substvars install -m0755 -d debian/.debhelper/skewer/dbgsym-root/DEBIAN dpkg-gencontrol -pskewer -ldebian/changelog -Tdebian/skewer.substvars -cdebian/control -Pdebian/.debhelper/skewer/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=skewer-dbgsym "-DDepends=skewer (= \${binary:Version})" "-DDescription=debug symbols for skewer" -DBuild-Ids=d8a8c8d72e55fad8a6db620801f17d3e2dd61686 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/DEBIAN/control dpkg-gencontrol -pskewer -ldebian/changelog -Tdebian/skewer.substvars -cdebian/control -Pdebian/skewer chmod 0644 -- debian/skewer/DEBIAN/control dh_md5sums install -m0755 -d debian/skewer/DEBIAN cd debian/skewer >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/skewer/DEBIAN/md5sums install -m0755 -d debian/.debhelper/skewer/dbgsym-root/DEBIAN cd debian/.debhelper/skewer/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/skewer/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --root-owner-group --build debian/skewer .. dpkg-deb --root-owner-group --build debian/.debhelper/skewer/dbgsym-root .. dpkg-deb: building package 'skewer' in '../skewer_0.2.2-6_i386.deb'. dpkg-deb: building package 'skewer-dbgsym' in '../skewer-dbgsym_0.2.2-6_i386.deb'. dpkg-genbuildinfo --build=binary -O../skewer_0.2.2-6_i386.buildinfo dpkg-genchanges --build=binary -O../skewer_0.2.2-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/15031/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/15031/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15031 and its subdirectories I: Current time: Sat Nov 23 06:37:51 +14 2024 I: pbuilder-time-stamp: 1732293471 + false + set +x Fri Nov 22 16:37:51 UTC 2024 I: Signing ./b2/skewer_0.2.2-6_i386.buildinfo as skewer_0.2.2-6_i386.buildinfo.asc Fri Nov 22 16:37:52 UTC 2024 I: Signed ./b2/skewer_0.2.2-6_i386.buildinfo as ./b2/skewer_0.2.2-6_i386.buildinfo.asc Fri Nov 22 16:37:52 UTC 2024 - build #2 for skewer/trixie/i386 on ionos2-i386 done. Starting cleanup. All cleanup done. Fri Nov 22 16:37:52 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-YXc1DBQM, removing. /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ: total 44 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 16:37 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 22 16:37 b2 -rw------- 1 jenkins jenkins 31044 Nov 22 16:37 rbuildlog.ihWTgj3 -rw-r--r-- 1 jenkins jenkins 1941 Oct 31 2021 skewer_0.2.2-6.dsc /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1: total 788 -rw-r--r-- 1 jenkins jenkins 27735 Nov 22 16:37 build.log -rw-r--r-- 1 jenkins jenkins 617428 Nov 22 16:37 skewer-dbgsym_0.2.2-6_i386.deb -rw-r--r-- 1 jenkins jenkins 21760 Nov 22 16:37 skewer_0.2.2-6.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1941 Nov 22 16:37 skewer_0.2.2-6.dsc -rw-r--r-- 1 jenkins jenkins 4874 Nov 22 16:37 skewer_0.2.2-6_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 5756 Nov 22 16:37 skewer_0.2.2-6_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1351 Nov 22 16:37 skewer_0.2.2-6_i386.changes -rw-r--r-- 1 jenkins jenkins 97384 Nov 22 16:37 skewer_0.2.2-6_i386.deb -rw-r--r-- 1 jenkins jenkins 1218 Nov 22 16:37 skewer_0.2.2-6_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2: total 784 -rw-r--r-- 1 jenkins jenkins 29637 Nov 22 16:37 build.log -rw-r--r-- 1 jenkins jenkins 617428 Nov 22 16:37 skewer-dbgsym_0.2.2-6_i386.deb -rw-r--r-- 1 jenkins jenkins 21760 Nov 22 16:37 skewer_0.2.2-6.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 1941 Nov 22 16:37 skewer_0.2.2-6.dsc -rw-r--r-- 1 jenkins jenkins 4874 Nov 22 16:37 skewer_0.2.2-6_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 5756 Nov 22 16:37 skewer_0.2.2-6_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1351 Nov 22 16:37 skewer_0.2.2-6_i386.changes -rw-r--r-- 1 jenkins jenkins 97384 Nov 22 16:37 skewer_0.2.2-6_i386.deb -rw-r--r-- 1 jenkins jenkins 1218 Nov 22 16:37 skewer_0.2.2-6_source.changes Fri Nov 22 16:37:52 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. Fri Nov 22 16:37:53 UTC 2024 I: skewer_0.2.2-6_i386.changes: Format: 1.8 Date: Sun, 31 Oct 2021 20:10:47 +0530 Source: skewer Binary: skewer skewer-dbgsym Architecture: i386 Version: 0.2.2-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: skewer - post-processing of high-throughput DNA sequence reads Closes: 984334 Changes: skewer (0.2.2-6) unstable; urgency=medium . * Team upload. * Add patch to fix FTBFS with gcc-11 (Closes: #984334) Checksums-Sha1: 4deeef566f3fc2abbdb26af1dc9487a1e8ed8815 617428 skewer-dbgsym_0.2.2-6_i386.deb 395f3467cfcbbb50e86fb38df36033906cd15824 4874 skewer_0.2.2-6_i386.buildinfo cf71f02c31cb46eab5f4ce3ea22c756acf21042e 97384 skewer_0.2.2-6_i386.deb Checksums-Sha256: 5f85b1162ee29f984ddcd2274dcd0d73b011dce9d182ad252cdac41881b7162d 617428 skewer-dbgsym_0.2.2-6_i386.deb 92fca843f5343b7b62cc3e77de692284a120a27bba1397dbc4f51993bd43122c 4874 skewer_0.2.2-6_i386.buildinfo eafc69cfcd866df40ed30fd6eb06bc665877a1d78af68e07e3bd555818deca0c 97384 skewer_0.2.2-6_i386.deb Files: 8ab29fe7bcf4925726447ab13b9f1990 617428 debug optional skewer-dbgsym_0.2.2-6_i386.deb 4e4d8913d660dbeb8e0db70c2806d10a 4874 science optional skewer_0.2.2-6_i386.buildinfo af1cfb304d9b5c8375fe8666a6272e27 97384 science optional skewer_0.2.2-6_i386.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/skewer_0.2.2-6.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/skewer_0.2.2-6.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/skewer_0.2.2-6.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/skewer_0.2.2-6.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/i386/skewer_0.2.2-6_i386.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/skewer_0.2.2-6.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-22 16:37:08.387874120 +0000 +++ b2/build.log 2024-11-22 16:37:52.617874563 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Dec 25 10:59:25 -12 2025 -I: pbuilder-time-stamp: 1766703565 +I: Current time: Sat Nov 23 06:37:10 +14 2024 +I: pbuilder-time-stamp: 1732293430 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -30,54 +30,86 @@ dpkg-source: info: applying gcc11.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/115429/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 22 16:37 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='cc285042255244aa876a04bd2e5c6db4' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='115429' - PS1='# ' - PS2='> ' + INVOCATION_ID=ebb816ae40514cf6a924ad2ff13c18b5 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15031 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_PR2o --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1 --logfile b1/build.log skewer_0.2.2-6.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/pbuilderrc_tgw3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2 --logfile b2/build.log skewer_0.2.2-6.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos6-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/115429/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -142,7 +174,7 @@ Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] -Fetched 20.1 MB in 0s (82.8 MB/s) +Fetched 20.1 MB in 0s (69.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) @@ -273,7 +305,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/skewer-0.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../skewer_0.2.2-6_source.changes +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/skewer-0.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../skewer_0.2.2-6_source.changes dpkg-buildpackage: info: source package skewer dpkg-buildpackage: info: source version 0.2.2-6 dpkg-buildpackage: info: source distribution unstable @@ -283,7 +319,7 @@ debian/rules clean dh clean dh_auto_clean - make -j22 clean + make -j10 clean make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' rm -rf src/main.o src/parameter.o src/matrix.o src/fastq.o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' @@ -306,7 +342,7 @@ dh_autoreconf dh_auto_configure dh_auto_build - make -j22 "INSTALL=install --strip-program=true" + make -j10 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/skewer-0.2.2' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/main.cpp -o src/main.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -c src/parameter.cpp -o src/parameter.o @@ -352,7 +388,7 @@ g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/skewer-0.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -O2 -Wl,-z,relro -Wl,-z,now -pthread src/main.o src/parameter.o src/matrix.o src/fastq.o -o skewer make[1]: Leaving directory '/build/reproducible-path/skewer-0.2.2' dh_auto_test - rm -fr -- /tmp/dh-xdg-rundir-NfnJy5RX + rm -fr -- /tmp/dh-xdg-rundir-O4B7GX3Z create-stamp debian/debhelper-build-stamp dh_prep rm -f -- debian/skewer.substvars @@ -430,8 +466,8 @@ dh_builddeb dpkg-deb --root-owner-group --build debian/skewer .. dpkg-deb --root-owner-group --build debian/.debhelper/skewer/dbgsym-root .. -dpkg-deb: building package 'skewer-dbgsym' in '../skewer-dbgsym_0.2.2-6_i386.deb'. dpkg-deb: building package 'skewer' in '../skewer_0.2.2-6_i386.deb'. +dpkg-deb: building package 'skewer-dbgsym' in '../skewer-dbgsym_0.2.2-6_i386.deb'. dpkg-genbuildinfo --build=binary -O../skewer_0.2.2-6_i386.buildinfo dpkg-genchanges --build=binary -O../skewer_0.2.2-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -439,12 +475,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15031/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/115429 and its subdirectories -I: Current time: Thu Dec 25 11:00:07 -12 2025 -I: pbuilder-time-stamp: 1766703607 +I: removing directory /srv/workspace/pbuilder/15031 and its subdirectories +I: Current time: Sat Nov 23 06:37:51 +14 2024 +I: pbuilder-time-stamp: 1732293471 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/skewer_0.2.2-6.diff: 67.9% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/skewer_0.2.2-6.diff.gz b2/build.log: 74.2% -- replaced with stdout Compressing the 1st log... b1/build.log: 74.8% -- replaced with stdout Fri Nov 22 16:37:54 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_skewer_trixie_i386_1732293474 + touch /var/log/reproducible-builds/diffoscope_stamp_skewer_trixie_i386_1732293474 + RESULT=0 + systemd-run '--description=diffoscope on skewer/0.2.2-6 in trixie/i386' --slice=rb-build-diffoscope.slice -u rb-diffoscope-i386_11-33960 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ --run-session -c jenkins-reproducible-trixie-diffoscope-6ac5d639-b9ce-4c33-9975-dc3958df7532 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/dbd-tmp-0wG4llz ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/skewer_0.2.2-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/skewer_0.2.2-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/skewer_0.2.2-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1/skewer_0.2.2-6_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2/skewer_0.2.2-6_i386.changes' + false + set +x Running as unit: rb-diffoscope-i386_11-33960.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/skewer_0.2.2-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/skewer_0.2.2-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/skewer_0.2.2-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b1/skewer_0.2.2-6_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.5fQ3J7WQ/b2/skewer_0.2.2-6_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.330s) 0.330s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.021s) 0.021s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 617ms CPU time consumed: 617ms _ ___| | _______ _____ _ __ / __| |/ / _ \ \ /\ / / _ \ '__| \__ \ < __/\ V V / __/ | |___/_|\_\___| \_/\_/ \___|_| Fri Nov 22 16:37:54 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Fri Nov 22 16:37:54 UTC 2024 I: skewer from trixie built successfully and reproducibly on i386. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-22 16:37:55] INFO: Starting at 2024-11-22 16:37:55.541074 [2024-11-22 16:37:55] INFO: Generating the pages of 1 package(s) [2024-11-22 16:37:55] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/i386/skewer didn't produce a buildlog, even though it has been built. [2024-11-22 16:37:55] INFO: Finished at 2024-11-22 16:37:55.882876, took: 0:00:00.341808 Fri Nov 22 16:37:55 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/i386/skewer.html Fri Nov 22 16:37:55 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Nov 22 16:37:55 UTC 2024 I: Submitting 8.0K b1/skewer_0.2.2-6_i386.buildinfo.asc https://buildinfo.debian.net/395f3467cfcbbb50e86fb38df36033906cd15824/skewer_0.2.2-6_i386 Fri Nov 22 16:37:57 UTC 2024 I: Submitting 8.0K b2/skewer_0.2.2-6_i386.buildinfo.asc https://buildinfo.debian.net/013200ff7c95905f019f943e3af851cd684ec0f4/skewer_0.2.2-6_i386 Fri Nov 22 16:37:58 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Nov 22 16:37:58 UTC 2024 I: Done submitting .buildinfo files. Fri Nov 22 16:37:58 UTC 2024 I: Removing signed skewer_0.2.2-6_i386.buildinfo.asc files: removed './b1/skewer_0.2.2-6_i386.buildinfo.asc' removed './b2/skewer_0.2.2-6_i386.buildinfo.asc' 1732293478 i386 trixie skewer Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/skewer_0.2.2-6.rbuild.log: 71.8% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/skewer_0.2.2-6.rbuild.log.gz [2024-11-22 16:37:58] INFO: Starting at 2024-11-22 16:37:58.775470 [2024-11-22 16:37:58] INFO: Generating the pages of 1 package(s) [2024-11-22 16:37:59] INFO: Finished at 2024-11-22 16:37:59.108731, took: 0:00:00.333269 All cleanup done. Fri Nov 22 16:37:59 UTC 2024 - total duration: 0h 1m 43s. Fri Nov 22 16:37:59 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-1JaU6UE1, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1min 48.290s CPU time consumed: 6.679s