Running as unit: rb-build-i386_17-28561.service ==================================================================================== Thu Nov 21 09:54:34 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_17) on jenkins, called using "infom07-i386 infom08-i386" as arguments. Thu Nov 21 09:54:34 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-PPuyt5Ug" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 09:54:34 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom07-i386.debian.net is marked as down. Thu Nov 21 09:54:34 UTC 2024 - checking via ssh if infom07-i386.debian.net is up. removed '/tmp/read-only-fs-test-NkmGw2' Thu Nov 21 09:54:35 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom08-i386.debian.net is marked as down. Thu Nov 21 09:54:35 UTC 2024 - checking via ssh if infom08-i386.debian.net is up. removed '/tmp/read-only-fs-test-n06OPe' ok, let's check if fasttree is building anywhere yet… ok, fasttree is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of fasttree in trixie on i386 on jenkins now. 1st build will be done on infom07-i386.debian.net. 2nd build will be done on infom08-i386.debian.net. ============================================================================= Thu Nov 21 09:54:45 UTC 2024 I: starting to build fasttree/trixie/i386 on jenkins on '2024-11-21 09:54' Thu Nov 21 09:54:45 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_17/28561/console.log 1732182885 i386 trixie fasttree Thu Nov 21 09:54:45 UTC 2024 I: Downloading source for trixie/fasttree=2.1.11-2 --2024-11-21 09:54:46-- http://deb.debian.org/debian/pool/main/f/fasttree/fasttree_2.1.11-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2085 (2.0K) [text/prs.lines.tag] Saving to: ‘fasttree_2.1.11-2.dsc’ 0K .. 100% 243M=0s 2024-11-21 09:54:46 (243 MB/s) - ‘fasttree_2.1.11-2.dsc’ saved [2085/2085] --2024-11-21 09:54:46-- http://deb.debian.org/debian/pool/main/f/fasttree/fasttree_2.1.11-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2085 (2.0K) [text/prs.lines.tag] Saving to: ‘fasttree_2.1.11-2.dsc’ 0K .. 100% 243M=0s 2024-11-21 09:54:46 (243 MB/s) - ‘fasttree_2.1.11-2.dsc’ saved [2085/2085] Thu Nov 21 09:54:46 UTC 2024 I: fasttree_2.1.11-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: fasttree Binary: fasttree Architecture: any Version: 2.1.11-2 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Thorsten Alteholz , Andreas Tille , Roland Fehrenbacher Homepage: http://www.microbesonline.org/fasttree/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/fasttree Vcs-Git: https://salsa.debian.org/med-team/fasttree.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: fasttree deb science optional arch=any Checksums-Sha1: 2d929e726513c1b450a186b14ddebe0c2af0b960 96068 fasttree_2.1.11.orig.tar.xz 6941e408e19f05453775113821f54735dee3140f 34064 fasttree_2.1.11-2.debian.tar.xz Checksums-Sha256: 7f15713f02afb167f4f33dc067b5b2282b219b22fbaa17eb8f771a7147a05a5c 96068 fasttree_2.1.11.orig.tar.xz c423cfcdfd3f65d160e3c1c397bb7d8eea2c0e17a8892ded3e2c3a0c379560cf 34064 fasttree_2.1.11-2.debian.tar.xz Files: 44830517cc52f2406ba315a14f2ff10d 96068 fasttree_2.1.11.orig.tar.xz 67fc001726234552d41a2ad15b83692d 34064 fasttree_2.1.11-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/bjpQRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH69w/+P8bggygsVNHF2RykRMHM8eyrH3D8eZjM BeO2vvriwNddLvspecpfi1OvvXk9U/bz/6k0DDQ2h2gJ0R9zFAg43mNwkc/q6vx4 fK49RVLgPtjwgrvaNBYuGxH0QgbkfYHeRN368uFqLcFZ5FKU4wm65jHu8Eh+JnWW gFe7F5KLOKelhBlO4/NTLIaiA5kOaL7l2xi2G19IHn/9bLzab/xoD/UJYUY39xzT G5ztJx4Cxud8TYK5QYD4Vbcdd3kJJdelS/GE1q3NOIOf9bBGMaN/1mb2mMFg41fT j1QgW/vOX9ccx/xysaSHWE0ZU9aF/zz6ZpGSc+N54y/dTUc7pwoGNCAA8510jw3B f7WhuqBJikHsLA5jXAK7CGbJYT5CVN4KOlJN0pTINPe+V07vgQxsu2YOJP40eTHA aBS7eTPhgZDI9fk+JBe9SnnwH4EMyJZgAQ8M95rq2SH2RXYvux8BcYSL4tOeTmD5 9/tERl/31vSB4hU98hN9VHkrDXhUXsZMEY92UveK44TfradVFLg2gSlQg2nPUHtw 2cahdOPKI8oTZfVmDDUOAbbNYBVH62u2RUsu0FjaCA1EP6mTFKEN8t1ZbfefcOIW Zny0LvVL3uEBVizFhdR1ftnqrU77/FAHt8xJyEmNzq1LdXHBcAdMQ4xOzKutbT8U qy9lckkkXks= =PLs9 -----END PGP SIGNATURE----- Thu Nov 21 09:54:46 UTC 2024 I: Checking whether the package is not for us Thu Nov 21 09:54:46 UTC 2024 I: Starting 1st build on remote node infom07-i386.debian.net. Thu Nov 21 09:54:46 UTC 2024 I: Preparing to do remote build '1' on infom07-i386.debian.net. Thu Nov 21 09:54:46 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom07-i386.debian.net is marked as down. Thu Nov 21 09:54:46 UTC 2024 - checking via ssh if infom07-i386.debian.net is up. removed '/tmp/read-only-fs-test-3Qluqc' ==================================================================================== Thu Nov 21 09:54:47 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on infom07-i386, called using "1 fasttree trixie /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw 2.1.11-2" as arguments. Thu Nov 21 09:54:47 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-dcrWdWpZ" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 09:54:47 UTC 2024 I: Downloading source for trixie/fasttree=2.1.11-2 Reading package lists... NOTICE: 'fasttree' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fasttree.git Please use: git clone https://salsa.debian.org/med-team/fasttree.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 132 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (dsc) [2085 B] Get:2 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (tar) [96.1 kB] Get:3 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (diff) [34.1 kB] Fetched 132 kB in 0s (1488 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'fasttree' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fasttree.git Please use: git clone https://salsa.debian.org/med-team/fasttree.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 132 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (dsc) [2085 B] Get:2 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (tar) [96.1 kB] Get:3 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (diff) [34.1 kB] Fetched 132 kB in 0s (1488 kB/s) Download complete and in download only mode ============================================================================= Building fasttree in trixie on i386 on infom07-i386 now. Date: Thu Nov 21 09:54:47 UTC 2024 Date UTC: Thu Nov 21 09:54:47 UTC 2024 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 20 21:54:47 -12 2024 I: pbuilder-time-stamp: 1732182887 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [fasttree_2.1.11-2.dsc] I: copying [./fasttree_2.1.11.orig.tar.xz] I: copying [./fasttree_2.1.11-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 17 17:00:04 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fasttree_2.1.11-2.dsc: no acceptable signature found dpkg-source: info: extracting fasttree in fasttree-2.1.11 dpkg-source: info: unpacking fasttree_2.1.11.orig.tar.xz dpkg-source: info: unpacking fasttree_2.1.11-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/8752/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='89a2cbe5d0474ca884ea8bc342cc88a6' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='8752' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_5YLO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1 --logfile b1/build.log fasttree_2.1.11-2.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/8752/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Fetched 20.1 MB in 0s (98.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fasttree-2.1.11/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fasttree_2.1.11-2_source.changes dpkg-buildpackage: info: source package fasttree dpkg-buildpackage: info: source version 2.1.11-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_clean make -j6 distclean make[2]: Entering directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttree make[2]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttreeMP make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j6 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttree fasttree.c -lm cc -DOPENMP -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttreeMP fasttree.c -lm fasttree.c: In function 'CreateGTR': fasttree.c:9554:10: warning: 'CreateTransitionMatrix' accessing 3200 bytes in a region of size 640 [-Wstringop-overflow=] 9554 | return(CreateTransitionMatrix(matrix,f)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fasttree.c:9554:10: note: referencing argument 1 of type 'double[20][20]' fasttree.c:9554:10: note: referencing argument 2 of type 'double[20]' fasttree.c:9557:22: note: in a call to function 'CreateTransitionMatrix' 9557 | transition_matrix_t *CreateTransitionMatrix(/*IN*/double matrix[MAXCODES][MAXCODES], | ^~~~~~~~~~~~~~~~~~~~~~ fasttree.c: In function 'CreateGTR': fasttree.c:9554:10: warning: 'CreateTransitionMatrix' accessing 3200 bytes in a region of size 640 [-Wstringop-overflow=] 9554 | return(CreateTransitionMatrix(matrix,f)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fasttree.c:9554:10: note: referencing argument 1 of type 'double[20][20]' fasttree.c:9554:10: note: referencing argument 2 of type 'double[20]' fasttree.c:9557:22: note: in a call to function 'CreateTransitionMatrix' 9557 | transition_matrix_t *CreateTransitionMatrix(/*IN*/double matrix[MAXCODES][MAXCODES], | ^~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/fasttree/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_installchangelogs changelog make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'fasttree' in '../fasttree_2.1.11-2_i386.deb'. dpkg-deb: building package 'fasttree-dbgsym' in '../fasttree-dbgsym_2.1.11-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../fasttree_2.1.11-2_i386.buildinfo dpkg-genchanges --build=binary -O../fasttree_2.1.11-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/8752 and its subdirectories I: Current time: Wed Nov 20 21:55:21 -12 2024 I: pbuilder-time-stamp: 1732182921 Thu Nov 21 09:55:21 UTC 2024 I: Signing ./b1/fasttree_2.1.11-2_i386.buildinfo as fasttree_2.1.11-2_i386.buildinfo.asc Thu Nov 21 09:55:21 UTC 2024 I: Signed ./b1/fasttree_2.1.11-2_i386.buildinfo as ./b1/fasttree_2.1.11-2_i386.buildinfo.asc Thu Nov 21 09:55:21 UTC 2024 - build #1 for fasttree/trixie/i386 on infom07-i386 done. Starting cleanup. All cleanup done. Thu Nov 21 09:55:21 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-dcrWdWpZ, removing. /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 09:55 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 09:54 b2 -rw-r--r-- 1 jenkins jenkins 2085 Dec 17 2020 fasttree_2.1.11-2.dsc -rw------- 1 jenkins jenkins 3191 Nov 21 09:54 rbuildlog.eWp64Dm /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1: total 612 -rw-r--r-- 1 jenkins jenkins 19929 Nov 21 09:55 build.log -rw-r--r-- 1 jenkins jenkins 348468 Nov 21 09:55 fasttree-dbgsym_2.1.11-2_i386.deb -rw-r--r-- 1 jenkins jenkins 34064 Nov 21 09:55 fasttree_2.1.11-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2085 Nov 21 09:55 fasttree_2.1.11-2.dsc -rw-r--r-- 1 jenkins jenkins 4900 Nov 21 09:55 fasttree_2.1.11-2_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 5782 Nov 21 09:55 fasttree_2.1.11-2_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1810 Nov 21 09:55 fasttree_2.1.11-2_i386.changes -rw-r--r-- 1 jenkins jenkins 184672 Nov 21 09:55 fasttree_2.1.11-2_i386.deb -rw-r--r-- 1 jenkins jenkins 1658 Nov 21 09:55 fasttree_2.1.11-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2: total 0 Thu Nov 21 09:55:22 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Nov 20 21:54:47 -12 2024 I: pbuilder-time-stamp: 1732182887 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [fasttree_2.1.11-2.dsc] I: copying [./fasttree_2.1.11.orig.tar.xz] I: copying [./fasttree_2.1.11-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 17 17:00:04 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fasttree_2.1.11-2.dsc: no acceptable signature found dpkg-source: info: extracting fasttree in fasttree-2.1.11 dpkg-source: info: unpacking fasttree_2.1.11.orig.tar.xz dpkg-source: info: unpacking fasttree_2.1.11-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/8752/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='89a2cbe5d0474ca884ea8bc342cc88a6' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='8752' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_5YLO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1 --logfile b1/build.log fasttree_2.1.11-2.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/8752/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Fetched 20.1 MB in 0s (98.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fasttree-2.1.11/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fasttree_2.1.11-2_source.changes dpkg-buildpackage: info: source package fasttree dpkg-buildpackage: info: source version 2.1.11-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_clean make -j6 distclean make[2]: Entering directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttree make[2]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttreeMP make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j6 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttree fasttree.c -lm cc -DOPENMP -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttreeMP fasttree.c -lm fasttree.c: In function 'CreateGTR': fasttree.c:9554:10: warning: 'CreateTransitionMatrix' accessing 3200 bytes in a region of size 640 [-Wstringop-overflow=] 9554 | return(CreateTransitionMatrix(matrix,f)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fasttree.c:9554:10: note: referencing argument 1 of type 'double[20][20]' fasttree.c:9554:10: note: referencing argument 2 of type 'double[20]' fasttree.c:9557:22: note: in a call to function 'CreateTransitionMatrix' 9557 | transition_matrix_t *CreateTransitionMatrix(/*IN*/double matrix[MAXCODES][MAXCODES], | ^~~~~~~~~~~~~~~~~~~~~~ fasttree.c: In function 'CreateGTR': fasttree.c:9554:10: warning: 'CreateTransitionMatrix' accessing 3200 bytes in a region of size 640 [-Wstringop-overflow=] 9554 | return(CreateTransitionMatrix(matrix,f)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fasttree.c:9554:10: note: referencing argument 1 of type 'double[20][20]' fasttree.c:9554:10: note: referencing argument 2 of type 'double[20]' fasttree.c:9557:22: note: in a call to function 'CreateTransitionMatrix' 9557 | transition_matrix_t *CreateTransitionMatrix(/*IN*/double matrix[MAXCODES][MAXCODES], | ^~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/fasttree/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_installchangelogs changelog make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'fasttree' in '../fasttree_2.1.11-2_i386.deb'. dpkg-deb: building package 'fasttree-dbgsym' in '../fasttree-dbgsym_2.1.11-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../fasttree_2.1.11-2_i386.buildinfo dpkg-genchanges --build=binary -O../fasttree_2.1.11-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/8752 and its subdirectories I: Current time: Wed Nov 20 21:55:21 -12 2024 I: pbuilder-time-stamp: 1732182921 Thu Nov 21 09:55:23 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom08-i386.debian.net. Thu Nov 21 09:55:23 UTC 2024 I: Preparing to do remote build '2' on infom08-i386.debian.net. Thu Nov 21 09:55:23 UTC 2024 - checking /var/lib/jenkins/offline_nodes if infom08-i386.debian.net is marked as down. Thu Nov 21 09:55:23 UTC 2024 - checking via ssh if infom08-i386.debian.net is up. removed '/tmp/read-only-fs-test-NNBuDa' ==================================================================================== Wed Dec 24 16:18:24 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on infom08-i386, called using "2 fasttree trixie /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw 2.1.11-2" as arguments. Wed Dec 24 16:18:24 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-Ywf0gTsn" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Dec 24 16:18:24 UTC 2025 I: Downloading source for trixie/fasttree=2.1.11-2 Reading package lists... NOTICE: 'fasttree' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fasttree.git Please use: git clone https://salsa.debian.org/med-team/fasttree.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 132 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (dsc) [2085 B] Get:2 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (tar) [96.1 kB] Get:3 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (diff) [34.1 kB] Fetched 132 kB in 0s (2286 kB/s) Download complete and in download only mode Reading package lists... NOTICE: 'fasttree' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/fasttree.git Please use: git clone https://salsa.debian.org/med-team/fasttree.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 132 kB of source archives. Get:1 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (dsc) [2085 B] Get:2 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (tar) [96.1 kB] Get:3 http://deb.debian.org/debian trixie/main fasttree 2.1.11-2 (diff) [34.1 kB] Fetched 132 kB in 0s (2286 kB/s) Download complete and in download only mode ============================================================================= Re-Building fasttree in trixie on i386 on infom08-i386 now. Date: Wed Dec 24 16:18:24 UTC 2025 Date UTC: Wed Dec 24 16:18:24 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_uhCd + case ${ARCH} in + let NUM_CPU-=3 + case $ARCH in + locale=de_CH + language=de + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' fasttree = debian-installer -o fasttree = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' fasttree = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_uhCd --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2 --logfile b2/build.log fasttree_2.1.11-2.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Thu Dec 25 06:18:24 +14 2025 I: pbuilder-time-stamp: 1766593104 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [fasttree_2.1.11-2.dsc] I: copying [./fasttree_2.1.11.orig.tar.xz] I: copying [./fasttree_2.1.11-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 17 17:00:04 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fasttree_2.1.11-2.dsc: no acceptable signature found dpkg-source: info: extracting fasttree in fasttree-2.1.11 dpkg-source: info: unpacking fasttree_2.1.11.orig.tar.xz dpkg-source: info: unpacking fasttree_2.1.11-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D01_modify_environment starting debug: Running on infom08-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 24 16:18 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=a725a64f4e65400faebb85abb39859bc LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=15313 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_uhCd --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2 --logfile b2/build.log fasttree_2.1.11-2.dsc' SUDO_GID=111 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Fetched 20.1 MB in 0s (93.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-11_i386.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-5+b1_i386.deb ... Unpacking libicu72:i386 (72.1-5+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_i386.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/15313/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/15313/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/fasttree-2.1.11/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fasttree_2.1.11-2_source.changes dpkg-buildpackage: info: source package fasttree dpkg-buildpackage: info: source version 2.1.11-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_clean make -j5 distclean make[2]: Entering directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttree make[2]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttreeMP make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j5 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttree fasttree.c -lm cc -DOPENMP -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttreeMP fasttree.c -lm fasttree.c: In function 'CreateGTR': fasttree.c:9554:10: warning: 'CreateTransitionMatrix' accessing 3200 bytes in a region of size 640 [-Wstringop-overflow=] 9554 | return(CreateTransitionMatrix(matrix,f)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fasttree.c:9554:10: note: referencing argument 1 of type 'double[20][20]' fasttree.c:9554:10: note: referencing argument 2 of type 'double[20]' fasttree.c:9557:22: note: in a call to function 'CreateTransitionMatrix' 9557 | transition_matrix_t *CreateTransitionMatrix(/*IN*/double matrix[MAXCODES][MAXCODES], | ^~~~~~~~~~~~~~~~~~~~~~ fasttree.c: In function 'CreateGTR': fasttree.c:9554:10: warning: 'CreateTransitionMatrix' accessing 3200 bytes in a region of size 640 [-Wstringop-overflow=] 9554 | return(CreateTransitionMatrix(matrix,f)); | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fasttree.c:9554:10: note: referencing argument 1 of type 'double[20][20]' fasttree.c:9554:10: note: referencing argument 2 of type 'double[20]' fasttree.c:9557:22: note: in a call to function 'CreateTransitionMatrix' 9557 | transition_matrix_t *CreateTransitionMatrix(/*IN*/double matrix[MAXCODES][MAXCODES], | ^~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install --destdir=debian/fasttree/ dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_installchangelogs changelog make[1]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'fasttree-dbgsym' in '../fasttree-dbgsym_2.1.11-2_i386.deb'. dpkg-deb: building package 'fasttree' in '../fasttree_2.1.11-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../fasttree_2.1.11-2_i386.buildinfo dpkg-genchanges --build=binary -O../fasttree_2.1.11-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/15313/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/15313/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15313 and its subdirectories I: Current time: Thu Dec 25 06:18:53 +14 2025 I: pbuilder-time-stamp: 1766593133 + false + set +x Wed Dec 24 16:18:53 UTC 2025 I: Signing ./b2/fasttree_2.1.11-2_i386.buildinfo as fasttree_2.1.11-2_i386.buildinfo.asc Wed Dec 24 16:18:53 UTC 2025 I: Signed ./b2/fasttree_2.1.11-2_i386.buildinfo as ./b2/fasttree_2.1.11-2_i386.buildinfo.asc Wed Dec 24 16:18:53 UTC 2025 - build #2 for fasttree/trixie/i386 on infom08-i386 done. Starting cleanup. All cleanup done. Wed Dec 24 16:18:53 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-Ywf0gTsn, removing. /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw: total 36 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 09:55 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 09:55 b2 -rw-r--r-- 1 jenkins jenkins 2085 Dec 17 2020 fasttree_2.1.11-2.dsc -rw------- 1 jenkins jenkins 23406 Nov 21 09:55 rbuildlog.eWp64Dm /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1: total 620 -rw-r--r-- 1 jenkins jenkins 19929 Nov 21 09:55 build.log -rw-r--r-- 1 jenkins jenkins 348468 Nov 21 09:55 fasttree-dbgsym_2.1.11-2_i386.deb -rw-r--r-- 1 jenkins jenkins 34064 Nov 21 09:55 fasttree_2.1.11-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2085 Nov 21 09:55 fasttree_2.1.11-2.dsc -rw-r--r-- 1 jenkins jenkins 4900 Nov 21 09:55 fasttree_2.1.11-2_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 5782 Nov 21 09:55 fasttree_2.1.11-2_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1810 Nov 21 09:55 fasttree_2.1.11-2_i386.changes -rw-r--r-- 1 jenkins jenkins 184672 Nov 21 09:55 fasttree_2.1.11-2_i386.deb -rw-r--r-- 1 jenkins jenkins 1658 Nov 21 09:55 fasttree_2.1.11-2_source.changes /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2: total 616 -rw-r--r-- 1 jenkins jenkins 21852 Nov 21 09:55 build.log -rw-r--r-- 1 jenkins jenkins 348468 Nov 21 09:55 fasttree-dbgsym_2.1.11-2_i386.deb -rw-r--r-- 1 jenkins jenkins 34064 Nov 21 09:55 fasttree_2.1.11-2.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2085 Nov 21 09:55 fasttree_2.1.11-2.dsc -rw-r--r-- 1 jenkins jenkins 4909 Nov 21 09:55 fasttree_2.1.11-2_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 5791 Nov 21 09:55 fasttree_2.1.11-2_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1810 Nov 21 09:55 fasttree_2.1.11-2_i386.changes -rw-r--r-- 1 jenkins jenkins 184672 Nov 21 09:55 fasttree_2.1.11-2_i386.deb -rw-r--r-- 1 jenkins jenkins 1658 Nov 21 09:55 fasttree_2.1.11-2_source.changes Thu Nov 21 09:55:55 UTC 2024 I: Deleting $TMPDIR on infom08-i386.debian.net. Thu Nov 21 09:55:56 UTC 2024 I: fasttree_2.1.11-2_i386.changes: Format: 1.8 Date: Thu, 17 Dec 2020 17:44:13 +0100 Source: fasttree Binary: fasttree fasttree-dbgsym Architecture: i386 Version: 2.1.11-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: fasttree - phylogenetic trees from alignments of nucleotide or protein seque Changes: fasttree (2.1.11-2) unstable; urgency=medium . * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Trim trailing whitespace. * Set field Upstream-Contact in debian/copyright. * Remove obsolete fields Contact, Name from debian/upstream/metadata (already present in machine-readable debian/copyright). * watch file standard 4 (routine-update) Checksums-Sha1: b8e9ccd493515cddcc7e0bb871ca5b4ea69486fd 348468 fasttree-dbgsym_2.1.11-2_i386.deb e228359fe8a11669452a3220d55492543ec9a4f0 4900 fasttree_2.1.11-2_i386.buildinfo 8f8a365fffa979ca2f513f262071f7450b53f612 184672 fasttree_2.1.11-2_i386.deb Checksums-Sha256: d184db93ee6834a402ac6654e2a7dfe5796c523da6abbb0ed9e8037a62095035 348468 fasttree-dbgsym_2.1.11-2_i386.deb eee26e2404dde436602ef14d08cdf5722c7798d10a60a5fbc77d4e1596aaa678 4900 fasttree_2.1.11-2_i386.buildinfo 55924a401d4b27c2b692a21219196556eb16aefa3049a03aaaf7f4e72137a397 184672 fasttree_2.1.11-2_i386.deb Files: df7a91d2dff3090a7d333c9ff2d9482e 348468 debug optional fasttree-dbgsym_2.1.11-2_i386.deb 829b199ce1c4a433169697128b8baacd 4900 science optional fasttree_2.1.11-2_i386.buildinfo dccfe93e67734182d7c2266846eb2d62 184672 science optional fasttree_2.1.11-2_i386.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/fasttree_2.1.11-2.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/fasttree_2.1.11-2.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/fasttree_2.1.11-2.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/fasttree_2.1.11-2.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/i386/fasttree_2.1.11-2_i386.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/fasttree_2.1.11-2.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2024-11-21 09:55:22.181891652 +0000 +++ b2/build.log 2024-11-21 09:55:55.048405160 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Nov 20 21:54:47 -12 2024 -I: pbuilder-time-stamp: 1732182887 +I: Current time: Thu Dec 25 06:18:24 +14 2025 +I: pbuilder-time-stamp: 1766593104 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,53 +29,85 @@ dpkg-source: info: applying Makefile.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/8752/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D01_modify_environment starting +debug: Running on infom08-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 24 16:18 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='89a2cbe5d0474ca884ea8bc342cc88a6' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='8752' - PS1='# ' - PS2='> ' + INVOCATION_ID=a725a64f4e65400faebb85abb39859bc + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15313 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_5YLO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1 --logfile b1/build.log fasttree_2.1.11-2.dsc' - SUDO_GID='111' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/pbuilderrc_uhCd --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2 --logfile b2/build.log fasttree_2.1.11-2.dsc' + SUDO_GID=111 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom07-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/8752/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -140,7 +172,7 @@ Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] -Fetched 20.1 MB in 0s (98.1 MB/s) +Fetched 20.1 MB in 0s (93.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) @@ -271,7 +303,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/fasttree-2.1.11/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fasttree_2.1.11-2_source.changes +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/fasttree-2.1.11/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fasttree_2.1.11-2_source.changes dpkg-buildpackage: info: source package fasttree dpkg-buildpackage: info: source version 2.1.11-2 dpkg-buildpackage: info: source distribution unstable @@ -283,7 +319,7 @@ debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' dh_auto_clean - make -j6 distclean + make -j5 distclean make[2]: Entering directory '/build/reproducible-path/fasttree-2.1.11' rm -f fasttree make[2]: Leaving directory '/build/reproducible-path/fasttree-2.1.11' @@ -296,7 +332,7 @@ dh_autoreconf dh_auto_configure dh_auto_build - make -j6 "INSTALL=install --strip-program=true" + make -j5 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fasttree-2.1.11' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttree fasttree.c -lm cc -DOPENMP -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fasttree-2.1.11=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DUSE_DOUBLE -Wl,-z,relro -Wl,-z,now -o fasttreeMP fasttree.c -lm @@ -345,8 +381,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'fasttree' in '../fasttree_2.1.11-2_i386.deb'. dpkg-deb: building package 'fasttree-dbgsym' in '../fasttree-dbgsym_2.1.11-2_i386.deb'. +dpkg-deb: building package 'fasttree' in '../fasttree_2.1.11-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../fasttree_2.1.11-2_i386.buildinfo dpkg-genchanges --build=binary -O../fasttree_2.1.11-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -354,12 +390,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15313/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/8752 and its subdirectories -I: Current time: Wed Nov 20 21:55:21 -12 2024 -I: pbuilder-time-stamp: 1732182921 +I: removing directory /srv/workspace/pbuilder/15313 and its subdirectories +I: Current time: Thu Dec 25 06:18:53 +14 2025 +I: pbuilder-time-stamp: 1766593133 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/fasttree_2.1.11-2.diff: 67.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/fasttree_2.1.11-2.diff.gz b2/build.log: 73.5% -- replaced with stdout Compressing the 1st log... b1/build.log: 74.5% -- replaced with stdout Thu Nov 21 09:55:57 UTC 2024 I: diffoscope 283 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_fasttree_trixie_i386_1732182957 + touch /var/log/reproducible-builds/diffoscope_stamp_fasttree_trixie_i386_1732182957 + RESULT=0 + systemd-run '--description=diffoscope on fasttree/2.1.11-2 in trixie/i386' --slice=rb-build-diffoscope.slice -u rb-diffoscope-i386_17-28561 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw --run-session -c jenkins-reproducible-trixie-diffoscope-3c1ec389-f8c5-4469-8d90-b6d2e89b344e -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/dbd-tmp-H7PUYvn ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/fasttree_2.1.11-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/fasttree_2.1.11-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/fasttree_2.1.11-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1/fasttree_2.1.11-2_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2/fasttree_2.1.11-2_i386.changes' + false + set +x Running as unit: rb-diffoscope-i386_17-28561.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/fasttree_2.1.11-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/fasttree_2.1.11-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/fasttree_2.1.11-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b1/fasttree_2.1.11-2_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.0ywIKvqw/b2/fasttree_2.1.11-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.341s) 0.341s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 644ms CPU time consumed: 641ms __ _ _ / _| __ _ ___| |_| |_ _ __ ___ ___ | |_ / _` / __| __| __| '__/ _ \/ _ \ | _| (_| \__ \ |_| |_| | | __/ __/ |_| \__,_|___/\__|\__|_| \___|\___| Thu Nov 21 09:55:58 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Thu Nov 21 09:55:58 UTC 2024 I: fasttree from trixie built successfully and reproducibly on i386. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-21 09:55:59] INFO: Starting at 2024-11-21 09:55:59.104787 [2024-11-21 09:55:59] INFO: Generating the pages of 1 package(s) [2024-11-21 09:55:59] CRITICAL: https://tests.reproducible-builds.org/debian/trixie/i386/fasttree didn't produce a buildlog, even though it has been built. [2024-11-21 09:55:59] INFO: Finished at 2024-11-21 09:55:59.539249, took: 0:00:00.434469 Thu Nov 21 09:55:59 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/i386/fasttree.html Thu Nov 21 09:55:59 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Nov 21 09:55:59 UTC 2024 I: Submitting 8.0K b1/fasttree_2.1.11-2_i386.buildinfo.asc https://buildinfo.debian.net/e228359fe8a11669452a3220d55492543ec9a4f0/fasttree_2.1.11-2_i386 Thu Nov 21 09:56:01 UTC 2024 I: Submitting 8.0K b2/fasttree_2.1.11-2_i386.buildinfo.asc https://buildinfo.debian.net/177d40ed26af32b60517397e7e4311491df24c62/fasttree_2.1.11-2_i386 Thu Nov 21 09:56:02 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Nov 21 09:56:02 UTC 2024 I: Done submitting .buildinfo files. Thu Nov 21 09:56:02 UTC 2024 I: Removing signed fasttree_2.1.11-2_i386.buildinfo.asc files: removed './b1/fasttree_2.1.11-2_i386.buildinfo.asc' removed './b2/fasttree_2.1.11-2_i386.buildinfo.asc' 1732182962 i386 trixie fasttree Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/fasttree_2.1.11-2.rbuild.log: 70.6% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/fasttree_2.1.11-2.rbuild.log.gz [2024-11-21 09:56:02] INFO: Starting at 2024-11-21 09:56:02.571314 [2024-11-21 09:56:02] INFO: Generating the pages of 1 package(s) [2024-11-21 09:56:03] INFO: Finished at 2024-11-21 09:56:03.008311, took: 0:00:00.437005 All cleanup done. Thu Nov 21 09:56:03 UTC 2024 - total duration: 0h 1m 24s. Thu Nov 21 09:56:03 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-PPuyt5Ug, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1min 28.805s CPU time consumed: 7.213s