Running as unit: rb-build-i386_2-65305.service ==================================================================================== Sun Apr 27 05:51:45 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_2) on jenkins, called using "ionos6-i386 ionos2-i386" as arguments. Sun Apr 27 05:51:45 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-DYO9LhNF" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sun Apr 27 05:51:45 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos6-i386.debian.net is marked as down. Sun Apr 27 05:51:45 UTC 2025 - checking via ssh if ionos6-i386.debian.net is up. removed '/tmp/read-only-fs-test-UYmmFT' Sun Apr 27 05:51:45 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos2-i386.debian.net is marked as down. Sun Apr 27 05:51:45 UTC 2025 - checking via ssh if ionos2-i386.debian.net is up. removed '/tmp/read-only-fs-test-ylD4iz' ok, let's check if trinityrnaseq is building anywhere yet… ok, trinityrnaseq is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of trinityrnaseq in trixie on i386 on jenkins now. 1st build will be done on ionos6-i386.debian.net. 2nd build will be done on ionos2-i386.debian.net. ============================================================================= Sun Apr 27 05:51:53 UTC 2025 I: starting to build trinityrnaseq/trixie/i386 on jenkins on '2025-04-27 05:51' Sun Apr 27 05:51:53 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_2/65305/console.log 1745733113 i386 trixie trinityrnaseq Sun Apr 27 05:51:53 UTC 2025 I: Downloading source for trixie/trinityrnaseq=2.15.2+dfsg-1 --2025-04-27 05:51:53-- http://deb.debian.org/debian/pool/main/t/trinityrnaseq/trinityrnaseq_2.15.2%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2605 (2.5K) [text/prs.lines.tag] Saving to: ‘trinityrnaseq_2.15.2+dfsg-1.dsc’ 0K .. 100% 389M=0s 2025-04-27 05:51:53 (389 MB/s) - ‘trinityrnaseq_2.15.2+dfsg-1.dsc’ saved [2605/2605] --2025-04-27 05:51:53-- http://deb.debian.org/debian/pool/main/t/trinityrnaseq/trinityrnaseq_2.15.2%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2605 (2.5K) [text/prs.lines.tag] Saving to: ‘trinityrnaseq_2.15.2+dfsg-1.dsc’ 0K .. 100% 389M=0s 2025-04-27 05:51:53 (389 MB/s) - ‘trinityrnaseq_2.15.2+dfsg-1.dsc’ saved [2605/2605] Sun Apr 27 05:51:53 UTC 2025 I: trinityrnaseq_2.15.2+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: trinityrnaseq Binary: trinityrnaseq, trinityrnaseq-examples Architecture: amd64 arm64 ppc64el riscv64 loong64 Version: 2.15.2+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/trinityrnaseq/trinityrnaseq Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/trinityrnaseq Vcs-Git: https://salsa.debian.org/med-team/trinityrnaseq.git Testsuite: autopkgtest Testsuite-Triggers: hisat2, libpicard-java, python3-hisat2, r-bioc-deseq2, r-bioc-dexseq, r-bioc-edger, r-bioc-goseq, r-bioc-qvalue, r-cran-argparse, r-cran-cluster, r-cran-fastcluster, r-cran-goplot, r-cran-kernsmooth, r-cran-tidyverse, salmon Build-Depends: debhelper-compat (= 13), libjung-free-java (>= 2.1.1), javahelper, libgetopt-java, default-jdk, libjs-jquery, jaligner, libhts-dev, zlib1g-dev, cmake Package-List: trinityrnaseq deb science optional arch=amd64,arm64,ppc64el,riscv64,loong64 trinityrnaseq-examples deb science optional arch=amd64,arm64,ppc64el,riscv64,loong64 Checksums-Sha1: 3be4bba6d9817a7aff46f347d3411bd3de7fd1a0 304522512 trinityrnaseq_2.15.2+dfsg.orig.tar.xz bf0d3eec51925514577e5dab71dfbc5941232423 38880 trinityrnaseq_2.15.2+dfsg-1.debian.tar.xz Checksums-Sha256: 9aed70e38b5f3e0a8979602319f3bc17f44cc78ff415ae9b9f6ce724275d6359 304522512 trinityrnaseq_2.15.2+dfsg.orig.tar.xz b648b079fb4bef4fd6952ad81e10bbd91138df780286632bf7e03ee676bdf692 38880 trinityrnaseq_2.15.2+dfsg-1.debian.tar.xz Files: 0b638caf3999db86a83e3ae3b2f2388d 304522512 trinityrnaseq_2.15.2+dfsg.orig.tar.xz 27c84d902c3bd7dec98a84e68c69afee 38880 trinityrnaseq_2.15.2+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmbGY4YACgkQPCZ2P2xn 5uLG/Q//ezOKQMWOiDaJZ8K6Um9sEfso8vmgGH33xIXvdsgBm03dODYKP1XzGf+j u10WyHeo9K7ufn+tiMCnkIbQ9fEDFZk6REsuFDIWMakx10QSnzKecRN6bnwWiMBA Hg2z7NSqina04qRnkM/ERTa493EQ2R02uYSYdpsIPVHoucusmUqsmKEqUECzsyQS WlXY+FgfXF1O4fTdseJSx4gTJCWhplK9lUqfZyjlPrOeoYqAsCYcAawX/ehqwQQO KHxNH4YFoEWOprONFTkLijgxHCESJlVKW24ZkeOUXfGx4INCoST/3vhdknPJRjZP YXn+bHjWH/fOfKxyC66TXVlFyERzC3ehI+qv1CSI4wuVC/qO37OPSHZ65rhTUWkL /K3eD9wRGRfM7dYRBrBUzkNNXKoeHzByNBJUZXTTp1Wh7zaSeHQ8EYr1UbbOKzV7 HdtkZF54yxpic1AUEaoj8/0DbjTWPYxn4KXP1ibuaMfO+b56Rg6xsFOnnXdJ+8vY GipizZ6WKqZatKoGitSGX5OdNoaylXc7fWNAK6gfAYBdCeUQVy4IrhJpJi6HWgxA C4xSvv2tpN9roHQFCmUBM9cNbfZvB1U3NfZ87wBOKd4re5HaaWipzzsJeO55QhWA QHsn0lJRWeHaQ6aV9L0ApGHqOOcVeAV4og/IFJtwDVULfhBFL0w= =ANBp -----END PGP SIGNATURE----- Sun Apr 27 05:51:53 UTC 2025 I: Checking whether the package is not for us Sun Apr 27 05:51:53 UTC 2025 I: Package trinityrnaseq (2.15.2+dfsg-1) shall only be build on "amd64 arm64 loong64 ppc64el riscv64" and thus was skipped. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-04-27 05:51:54] INFO: Starting at 2025-04-27 05:51:54.529045 [2025-04-27 05:51:54] INFO: Generating the pages of 1 package(s) [2025-04-27 05:51:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/armhf/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/armhf/trinityrnaseq_2.11.0+dfsg-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/armhf/trinityrnaseq_2.11.0+dfsg-6.diff.gz is missing [2025-04-27 05:51:55] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/i386/trinityrnaseq_2.11.0+dfsg-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/i386/trinityrnaseq_2.11.0+dfsg-6.diff.gz is missing [2025-04-27 05:51:55] INFO: Finished at 2025-04-27 05:51:55.838893, took: 0:00:01.309851 Sun Apr 27 05:51:55 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/trixie/i386/trinityrnaseq.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/trinityrnaseq_2.15.2+dfsg-1.rbuild.log: 46.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/trixie/i386/trinityrnaseq_2.15.2+dfsg-1.rbuild.log.gz [2025-04-27 05:51:56] INFO: Starting at 2025-04-27 05:51:56.227903 [2025-04-27 05:51:56] INFO: Generating the pages of 1 package(s) [2025-04-27 05:51:57] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:57] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:57] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/armhf/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:57] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/trinityrnaseq_2.15.2+dfsg-1.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/trinityrnaseq_2.15.2+dfsg-1.diff.gz is missing [2025-04-27 05:51:57] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/armhf/trinityrnaseq_2.11.0+dfsg-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/armhf/trinityrnaseq_2.11.0+dfsg-6.diff.gz is missing [2025-04-27 05:51:57] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/i386/trinityrnaseq_2.11.0+dfsg-6.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/i386/trinityrnaseq_2.11.0+dfsg-6.diff.gz is missing [2025-04-27 05:51:57] INFO: Finished at 2025-04-27 05:51:57.509255, took: 0:00:01.281356 All cleanup done. Sun Apr 27 05:51:57 UTC 2025 - total duration: 0h 0m 0s. Sun Apr 27 05:51:57 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-DYO9LhNF, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 12.273s CPU time consumed: 4.924s