Running as unit: rb-build-i386_8-48625.service ==================================================================================== Thu Nov 21 14:08:20 UTC 2024 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_8) on jenkins, called using "ionos16-i386 ionos12-i386" as arguments. Thu Nov 21 14:08:20 UTC 2024 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-jPD0LXNq" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Thu Nov 21 14:08:21 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Thu Nov 21 14:08:21 UTC 2024 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-uDZu85' Thu Nov 21 14:08:21 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos12-i386.debian.net is marked as down. Thu Nov 21 14:08:21 UTC 2024 - checking via ssh if ionos12-i386.debian.net is up. removed '/tmp/read-only-fs-test-eZIp37' ok, let's check if python-skbio is building anywhere yet… ok, python-skbio is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of python-skbio in unstable on i386 on jenkins now. 1st build will be done on ionos16-i386.debian.net. 2nd build will be done on ionos12-i386.debian.net. ============================================================================= Thu Nov 21 14:08:27 UTC 2024 I: starting to build python-skbio/unstable/i386 on jenkins on '2024-11-21 14:08' Thu Nov 21 14:08:27 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_8/48625/console.log 1732198107 i386 unstable python-skbio Thu Nov 21 14:08:27 UTC 2024 I: Downloading source for unstable/python-skbio=0.6.2-4 --2024-11-21 14:08:27-- http://deb.debian.org/debian/pool/main/p/python-skbio/python-skbio_0.6.2-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2897 (2.8K) [text/prs.lines.tag] Saving to: ‘python-skbio_0.6.2-4.dsc’ 0K .. 100% 360M=0s 2024-11-21 14:08:27 (360 MB/s) - ‘python-skbio_0.6.2-4.dsc’ saved [2897/2897] --2024-11-21 14:08:27-- http://deb.debian.org/debian/pool/main/p/python-skbio/python-skbio_0.6.2-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2897 (2.8K) [text/prs.lines.tag] Saving to: ‘python-skbio_0.6.2-4.dsc’ 0K .. 100% 360M=0s 2024-11-21 14:08:27 (360 MB/s) - ‘python-skbio_0.6.2-4.dsc’ saved [2897/2897] Thu Nov 21 14:08:27 UTC 2024 I: python-skbio_0.6.2-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-skbio Binary: python-skbio-doc, python3-skbio Architecture: any all Version: 0.6.2-4 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Kevin Murray , Étienne Mollier Homepage: https://github.com/biocore/scikit-bio Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/python-skbio Vcs-Git: https://salsa.debian.org/med-team/python-skbio.git Testsuite: autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), cython3 (>= 3), dh-sequence-python3, python3-all-dev, python3-biom-format, python3-setuptools, python3-numpy, python3-matplotlib, python3-cachecontrol, python3-decorator, python3-h5py, python3-pandas, python3-scipy (>= 1.9), python3-ipython, python3-hdmedians, python3-sklearn, python3-natsort, python3-statsmodels, libssw-dev, sphinx-common, libsimde-dev Build-Depends-Arch: python3-pytest , architecture-is-64-bit Build-Depends-Indep: python3-sphinx , python3-sphinx-design , python3-sphinx-copybutton , python3-pydata-sphinx-theme , python3-doc , python3-numpydoc , python-scipy-doc , python-biom-format-doc , python-pandas-doc , python-numpy-doc Package-List: python-skbio-doc deb doc optional arch=all profile=!nodoc python3-skbio deb python optional arch=any Checksums-Sha1: 061edb3545506dde4dcffaf1e8ce6da4be5ed9b2 2204062 python-skbio_0.6.2.orig.tar.gz bb059b3f7e9fc14eaba558844d3295469254daa4 11936 python-skbio_0.6.2-4.debian.tar.xz Checksums-Sha256: c996ce6f0203c9db67f041131e024d2aba1319b6adfc7450e4f417cc52e4300a 2204062 python-skbio_0.6.2.orig.tar.gz d7a1f98de5c185f8c1a5764535df9a91535bb218bf3be300c76839b1b232882b 11936 python-skbio_0.6.2-4.debian.tar.xz Files: f7ea4d244ea949e10c8cd2d8217048ed 2204062 python-skbio_0.6.2.orig.tar.gz a14b168d3d956c8ed1ee25f36c817dff 11936 python-skbio_0.6.2-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmc7x6gACgkQPCZ2P2xn 5uK5pw//XJGEBI4GfRyZdIhrMIEJ9qCcKe/ZfE/zWbuwx1PxCjaIvSvXVJZsHxKJ E/z62bVOZpNzwUrIxMubHzSlT0TE19Vz8owtnCdc/1YVaxJv1xV3OKrJBiS5MPPB t2bP/vPgDYlbjzmwwHAgh4O3H6oserqQB5QkOGlkLnwsCiqk8Hj06cpIJLVCwTdE Dt8Vuj6n25ReIv3i8go0qPyzIxXAcYETix6WZPQ4+dl62O+QSPgGzS2vH1SFQJ/W UOJLWCPSdeYaw7L3+Q9cI84czy3ZhVnXZS4I2GgSfbkd5UqwEDFV3wRYhdUTjcTf PhNv1wj6M7VyOZQgPngTcb1GIqoqm5bbKiq7bNcx22YJmviVx0YPGxb4DpJnvczY VkK9yadSu6c6Ncsqtb2Hbqvod3BZ1/HGFkGiNsSMAVAPXAEMWmA2htE9yddwTkX4 OUjY1UAVoBWqY+8DxQcKyoCa4LG2ZCZC1lMm+WjqRHvmcBKiDgKV3gopKloe98je m4+Z3eKJGh8/QBin8gcLIEyoXyRoRjnJfWXCv6rWSmPI2IcEbYDi1uecYKBVpfR3 U1YQiy2CREik8++ZZSKzt0GrVkNto49HEPXlSs4Is22zfC4e2IACLLhVfUBzzHbp k9M28WIjoAcVP2BGX3hBW4Bt2coE4GdUn+wXXCaa9le2VFwTae4= =oxcg -----END PGP SIGNATURE----- Thu Nov 21 14:08:27 UTC 2024 I: Checking whether the package is not for us Thu Nov 21 14:08:27 UTC 2024 I: Starting 1st build on remote node ionos16-i386.debian.net. Thu Nov 21 14:08:27 UTC 2024 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Thu Nov 21 14:08:27 UTC 2024 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Thu Nov 21 14:08:27 UTC 2024 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-Al8BLe' ==================================================================================== Wed Dec 24 20:31:27 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos16-i386, called using "1 python-skbio unstable /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os 0.6.2-4" as arguments. Wed Dec 24 20:31:27 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-3eXvjJUA" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Wed Dec 24 20:31:27 UTC 2025 I: Downloading source for unstable/python-skbio=0.6.2-4 Reading package lists... NOTICE: 'python-skbio' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-skbio.git Please use: git clone https://salsa.debian.org/med-team/python-skbio.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2219 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-skbio 0.6.2-4 (dsc) [2897 B] Get:2 http://deb.debian.org/debian unstable/main python-skbio 0.6.2-4 (tar) [2204 kB] Get:3 http://deb.debian.org/debian unstable/main python-skbio 0.6.2-4 (diff) [11.9 kB] Fetched 2219 kB in 0s (11.6 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'python-skbio' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-skbio.git Please use: git clone https://salsa.debian.org/med-team/python-skbio.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2219 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-skbio 0.6.2-4 (dsc) [2897 B] Get:2 http://deb.debian.org/debian unstable/main python-skbio 0.6.2-4 (tar) [2204 kB] Get:3 http://deb.debian.org/debian unstable/main python-skbio 0.6.2-4 (diff) [11.9 kB] Fetched 2219 kB in 0s (11.6 MB/s) Download complete and in download only mode ============================================================================= Building python-skbio in unstable on i386 on ionos16-i386 now. Date: Wed Dec 24 21:31:28 CET 2025 Date UTC: Wed Dec 24 20:31:28 UTC 2025 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 24 08:31:28 -12 2025 I: pbuilder-time-stamp: 1766608288 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-skbio_0.6.2-4.dsc] I: copying [./python-skbio_0.6.2.orig.tar.gz] I: copying [./python-skbio_0.6.2-4.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Nov 18 23:03:04 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-skbio_0.6.2-4.dsc: no acceptable signature found dpkg-source: info: extracting python-skbio in python-skbio-0.6.2 dpkg-source: info: unpacking python-skbio_0.6.2.orig.tar.gz dpkg-source: info: unpacking python-skbio_0.6.2-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_packaged_simde dpkg-source: info: applying mathjax-path dpkg-source: info: applying 0002-use-libsww-as-library-not-embedded-src.patch dpkg-source: info: applying no_privacy_breach_logo.patch dpkg-source: info: applying local_inventory dpkg-source: info: applying docs-no-version-switch dpkg-source: info: applying 0007-Fix-cython-segmentation-error-2090.patch dpkg-source: info: applying 45127698e270024bacb670cdd0bd2e4850104b6f.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/96857/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='c5656166c6064441b6e6035e8ed22d97' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='96857' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os/pbuilderrc_CMdE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os/b1 --logfile b1/build.log python-skbio_0.6.2-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/96857/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cython3 (>= 3), dh-sequence-python3, python3-all-dev, python3-biom-format, python3-setuptools, python3-numpy, python3-matplotlib, python3-cachecontrol, python3-decorator, python3-h5py, python3-pandas, python3-scipy (>= 1.9), python3-ipython, python3-hdmedians, python3-sklearn, python3-natsort, python3-statsmodels, libssw-dev, sphinx-common, libsimde-dev, python3-sphinx, python3-sphinx-design, python3-sphinx-copybutton, python3-pydata-sphinx-theme, python3-doc, python3-numpydoc, python-scipy-doc, python-biom-format-doc, python-pandas-doc, python-numpy-doc, python3-pytest, architecture-is-64-bit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cython3 (>= 3); however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-cachecontrol; however: Package python3-cachecontrol is not installed. pbuilder-satisfydepends-dummy depends on python3-decorator; however: Package python3-decorator is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.9); however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-ipython; however: Package python3-ipython is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmedians; however: Package python3-hdmedians is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-natsort; however: Package python3-natsort is not installed. pbuilder-satisfydepends-dummy depends on python3-statsmodels; however: Package python3-statsmodels is not installed. pbuilder-satisfydepends-dummy depends on libssw-dev; however: Package libssw-dev is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however: Package python3-sphinx-design is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-copybutton; however: Package python3-sphinx-copybutton is not installed. pbuilder-satisfydepends-dummy depends on python3-pydata-sphinx-theme; however: Package python3-pydata-sphinx-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python-scipy-doc; however: Package python-scipy-doc is not installed. pbuilder-satisfydepends-dummy depends on python-biom-format-doc; however: Package python-biom-format-doc is not installed. pbuilder-satisfydepends-dummy depends on python-pandas-doc; however: Package python-pandas-doc is not installed. pbuilder-satisfydepends-dummy depends on python-numpy-doc; however: Package python-numpy-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however: Package architecture-is-64-bit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} fonts-mathjax{a} fonts-open-sans{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsimde-dev{a} libssh2-1t64{a} libssw-dev{a} libssw0{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} python-babel-localedata{a} python-biom-format-doc{a} python-matplotlib-data{a} python-numpy-doc{a} python-pandas-doc{a} python-scipy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-biom-format{a} python3-brotli{a} python3-bs4{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-patsy{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-design{a} python3-stack-data{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-accessible-pygments python3-bottleneck python3-cssselect python3-cvxopt python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 253 newly installed, 0 to remove and 0 not upgraded. Need to get 205 MB of archives. After unpacking 1261 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: architecture-is-64-bit which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} fonts-mathjax{a} fonts-open-sans{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsimde-dev{a} libssh2-1t64{a} libssw-dev{a} libssw0{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} python-babel-localedata{a} python-biom-format-doc{a} python-matplotlib-data{a} python-numpy-doc{a} python-pandas-doc{a} python-scipy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-biom-format{a} python3-brotli{a} python3-bs4{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-patsy{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-design{a} python3-stack-data{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-accessible-pygments python3-bottleneck python3-cssselect python3-cvxopt python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 253 newly installed, 0 to remove and 0 not upgraded. Need to get 205 MB of archives. After unpacking 1261 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/96857 and its subdirectories Starting cleanup. All cleanup done. Wed Dec 24 20:31:45 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-3eXvjJUA, removing. /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 14:08 b1 drwxr-xr-x 2 jenkins jenkins 4096 Nov 21 14:08 b2 -rw-r--r-- 1 jenkins jenkins 2897 Nov 18 23:09 python-skbio_0.6.2-4.dsc -rw------- 1 jenkins jenkins 4029 Nov 21 14:08 rbuildlog.DC4NG13 /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os/b1: total 24 -rw-r--r-- 1 jenkins jenkins 20515 Nov 21 14:08 build.log /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os/b2: total 0 Thu Nov 21 14:08:46 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 24 08:31:28 -12 2025 I: pbuilder-time-stamp: 1766608288 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-skbio_0.6.2-4.dsc] I: copying [./python-skbio_0.6.2.orig.tar.gz] I: copying [./python-skbio_0.6.2-4.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Nov 18 23:03:04 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-skbio_0.6.2-4.dsc: no acceptable signature found dpkg-source: info: extracting python-skbio in python-skbio-0.6.2 dpkg-source: info: unpacking python-skbio_0.6.2.orig.tar.gz dpkg-source: info: unpacking python-skbio_0.6.2-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_packaged_simde dpkg-source: info: applying mathjax-path dpkg-source: info: applying 0002-use-libsww-as-library-not-embedded-src.patch dpkg-source: info: applying no_privacy_breach_logo.patch dpkg-source: info: applying local_inventory dpkg-source: info: applying docs-no-version-switch dpkg-source: info: applying 0007-Fix-cython-segmentation-error-2090.patch dpkg-source: info: applying 45127698e270024bacb670cdd0bd2e4850104b6f.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/96857/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='c5656166c6064441b6e6035e8ed22d97' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='96857' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os/pbuilderrc_CMdE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.i3LpL3Os/b1 --logfile b1/build.log python-skbio_0.6.2-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/96857/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cython3 (>= 3), dh-sequence-python3, python3-all-dev, python3-biom-format, python3-setuptools, python3-numpy, python3-matplotlib, python3-cachecontrol, python3-decorator, python3-h5py, python3-pandas, python3-scipy (>= 1.9), python3-ipython, python3-hdmedians, python3-sklearn, python3-natsort, python3-statsmodels, libssw-dev, sphinx-common, libsimde-dev, python3-sphinx, python3-sphinx-design, python3-sphinx-copybutton, python3-pydata-sphinx-theme, python3-doc, python3-numpydoc, python-scipy-doc, python-biom-format-doc, python-pandas-doc, python-numpy-doc, python3-pytest, architecture-is-64-bit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cython3 (>= 3); however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-cachecontrol; however: Package python3-cachecontrol is not installed. pbuilder-satisfydepends-dummy depends on python3-decorator; however: Package python3-decorator is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.9); however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-ipython; however: Package python3-ipython is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmedians; however: Package python3-hdmedians is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-natsort; however: Package python3-natsort is not installed. pbuilder-satisfydepends-dummy depends on python3-statsmodels; however: Package python3-statsmodels is not installed. pbuilder-satisfydepends-dummy depends on libssw-dev; however: Package libssw-dev is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however: Package python3-sphinx-design is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-copybutton; however: Package python3-sphinx-copybutton is not installed. pbuilder-satisfydepends-dummy depends on python3-pydata-sphinx-theme; however: Package python3-pydata-sphinx-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python-scipy-doc; however: Package python-scipy-doc is not installed. pbuilder-satisfydepends-dummy depends on python-biom-format-doc; however: Package python-biom-format-doc is not installed. pbuilder-satisfydepends-dummy depends on python-pandas-doc; however: Package python-pandas-doc is not installed. pbuilder-satisfydepends-dummy depends on python-numpy-doc; however: Package python-numpy-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however: Package architecture-is-64-bit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} fonts-mathjax{a} fonts-open-sans{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsimde-dev{a} libssh2-1t64{a} libssw-dev{a} libssw0{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} python-babel-localedata{a} python-biom-format-doc{a} python-matplotlib-data{a} python-numpy-doc{a} python-pandas-doc{a} python-scipy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-biom-format{a} python3-brotli{a} python3-bs4{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-patsy{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-design{a} python3-stack-data{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-accessible-pygments python3-bottleneck python3-cssselect python3-cvxopt python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 253 newly installed, 0 to remove and 0 not upgraded. Need to get 205 MB of archives. After unpacking 1261 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: architecture-is-64-bit which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} fonts-mathjax{a} fonts-open-sans{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsimde-dev{a} libssh2-1t64{a} libssw-dev{a} libssw0{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} python-babel-localedata{a} python-biom-format-doc{a} python-matplotlib-data{a} python-numpy-doc{a} python-pandas-doc{a} python-scipy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-biom-format{a} python3-brotli{a} python3-bs4{a} python3-cachecontrol{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdmedians{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-patsy{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-design{a} python3-stack-data{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-accessible-pygments python3-bottleneck python3-cssselect python3-cvxopt python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 253 newly installed, 0 to remove and 0 not upgraded. Need to get 205 MB of archives. After unpacking 1261 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/96857 and its subdirectories python-skbio failed to build from source. removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-skbio_0.6.2-4.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-skbio_0.6.2-4.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/python-skbio_0.6.2-4.build1.log.gz' Thu Nov 21 14:08:47 UTC 2024 W: No second build log, what happened? Compressing the 1st log... b1/build.log: 76.9% -- replaced with stdout Thu Nov 21 14:08:47 UTC 2024 W: Downloading the build dependencies failed Thu Nov 21 14:08:47 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Thu Nov 21 14:08:47 UTC 2024 W: Network problems are automatically rescheduled after some hours. INSERT 0 1 INSERT 0 1 DELETE 1 [2024-11-21 14:08:48] INFO: Starting at 2024-11-21 14:08:48.000603 [2024-11-21 14:08:48] INFO: Generating the pages of 1 package(s) [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/python-skbio_0.6.2-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/python-skbio_0.6.2-3.diff.gz is missing [2024-11-21 14:08:48] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/i386/python-skbio didn't produce a buildlog, even though it has been built. [2024-11-21 14:08:48] CRITICAL: buildinfo not detected at /var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/amd64/python-skbio_0.6.2-4_amd64.buildinfo [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/python-skbio_0.6.2-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/python-skbio_0.6.2-4.diff.gz is missing [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/armhf/python-skbio_0.6.2-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/python-skbio_0.6.2-3.diff.gz is missing [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/python-skbio_0.6.2-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/python-skbio_0.6.2-4.diff.gz is missing [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/python-skbio_0.5.8-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/python-skbio_0.5.8-4.diff.gz is missing [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/python-skbio_0.5.8-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/python-skbio_0.5.8-4.diff.gz is missing [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/armhf/python-skbio_0.5.6-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/armhf/python-skbio_0.5.6-4.diff.gz is missing [2024-11-21 14:08:48] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/i386/python-skbio_0.5.6-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/i386/python-skbio_0.5.6-4.diff.gz is missing [2024-11-21 14:08:48] INFO: Finished at 2024-11-21 14:08:48.673812, took: 0:00:00.673216 Thu Nov 21 14:08:48 UTC 2024 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/i386/python-skbio.html Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-skbio_0.6.2-4.rbuild.log: 73.4% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-skbio_0.6.2-4.rbuild.log.gz [2024-11-21 14:08:49] INFO: Starting at 2024-11-21 14:08:49.109151 [2024-11-21 14:08:49] INFO: Generating the pages of 1 package(s) [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/armhf/python-skbio_0.6.2-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/armhf/python-skbio_0.6.2-3.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/python-skbio_0.6.2-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/python-skbio_0.6.2-4.diff.gz is missing [2024-11-21 14:08:49] CRITICAL: buildinfo not detected at /var/lib/jenkins/userContent/reproducible/debian/buildinfo/trixie/amd64/python-skbio_0.6.2-4_amd64.buildinfo [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/amd64/python-skbio_0.6.2-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/amd64/python-skbio_0.6.2-4.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/armhf/python-skbio_0.6.2-3.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/armhf/python-skbio_0.6.2-3.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/trixie/i386/python-skbio_0.6.2-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/trixie/i386/python-skbio_0.6.2-4.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/armhf/python-skbio_0.5.8-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/armhf/python-skbio_0.5.8-4.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bookworm/i386/python-skbio_0.5.8-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bookworm/i386/python-skbio_0.5.8-4.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/armhf/python-skbio_0.5.6-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/armhf/python-skbio_0.5.6-4.diff.gz is missing [2024-11-21 14:08:49] ERROR: Either /var/lib/jenkins/userContent/reproducible/debian/logs/bullseye/i386/python-skbio_0.5.6-4.build2.log.gz or /var/lib/jenkins/userContent/reproducible/debian/logdiffs/bullseye/i386/python-skbio_0.5.6-4.diff.gz is missing [2024-11-21 14:08:49] INFO: Finished at 2024-11-21 14:08:49.760236, took: 0:00:00.651090 All cleanup done. Thu Nov 21 14:08:49 UTC 2024 - total duration: 0h 0m 27s. Thu Nov 21 14:08:49 UTC 2024 - reproducible_build.sh stopped running as /tmp/jenkins-script-jPD0LXNq, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 28.967s CPU time consumed: 5.479s