Running as unit: rb-build-i386_8-66867.service ==================================================================================== Sat Apr 19 11:04:38 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job reproducible_builder_i386_8) on jenkins, called using "ionos16-i386 ionos12-i386" as arguments. Sat Apr 19 11:04:38 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-GcQvldz1" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Apr 19 11:04:38 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Sat Apr 19 11:04:38 UTC 2025 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-2GY4ch' Sat Apr 19 11:04:39 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos12-i386.debian.net is marked as down. Sat Apr 19 11:04:39 UTC 2025 - checking via ssh if ionos12-i386.debian.net is up. removed '/tmp/read-only-fs-test-2ZrjSb' ok, let's check if python-prodigy is building anywhere yet… ok, python-prodigy is not building anywhere… UPDATE 1 ============================================================================= Initialising reproducibly build of python-prodigy in unstable on i386 on jenkins now. 1st build will be done on ionos16-i386.debian.net. 2nd build will be done on ionos12-i386.debian.net. ============================================================================= Sat Apr 19 11:04:42 UTC 2025 I: starting to build python-prodigy/unstable/i386 on jenkins on '2025-04-19 11:04' Sat Apr 19 11:04:42 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_8/66867/console.log 1745060682 i386 unstable python-prodigy Sat Apr 19 11:04:42 UTC 2025 I: Downloading source for unstable/python-prodigy=2.2.5-1 --2025-04-19 11:04:42-- http://deb.debian.org/debian/pool/main/p/python-prodigy/python-prodigy_2.2.5-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2228 (2.2K) [text/prs.lines.tag] Saving to: ‘python-prodigy_2.2.5-1.dsc’ 0K .. 100% 365M=0s 2025-04-19 11:04:42 (365 MB/s) - ‘python-prodigy_2.2.5-1.dsc’ saved [2228/2228] --2025-04-19 11:04:42-- http://deb.debian.org/debian/pool/main/p/python-prodigy/python-prodigy_2.2.5-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2228 (2.2K) [text/prs.lines.tag] Saving to: ‘python-prodigy_2.2.5-1.dsc’ 0K .. 100% 365M=0s 2025-04-19 11:04:42 (365 MB/s) - ‘python-prodigy_2.2.5-1.dsc’ saved [2228/2228] Sat Apr 19 11:04:43 UTC 2025 I: python-prodigy_2.2.5-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-prodigy Binary: python3-prodigy Architecture: all Version: 2.2.5-1 Maintainer: Debian Python Team Uploaders: Andrius Merkys , Homepage: https://github.com/haddocking/prodigy Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/python-team/packages/python-prodigy Vcs-Git: https://salsa.debian.org/python-team/packages/python-prodigy.git Testsuite: autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, pybuild-plugin-pyproject, python3-all, python3-biopython , python3-freesasa , python3-numpy , python3-poetry-core Package-List: python3-prodigy deb science optional arch=all Checksums-Sha1: 77d082c52d515fbb4d9fe8c3a0aed721545aa7e5 5709417 python-prodigy_2.2.5.orig.tar.gz 7663c4108ef5f358fd6c7642139fc1e97238ee1c 1972 python-prodigy_2.2.5-1.debian.tar.xz Checksums-Sha256: 029f6d50ab8c83f5b74b05b8509f5421e74fea1557a956993a4db8c279863762 5709417 python-prodigy_2.2.5.orig.tar.gz a27302ffaab247d2df441d7d73f835192a600bb7a09fa0467f9485918f854fa7 1972 python-prodigy_2.2.5-1.debian.tar.xz Files: 5ec2e314029ba64f73c220722f30800a 5709417 python-prodigy_2.2.5.orig.tar.gz 1aca24602656ea3ffbc815f812f93d9e 1972 python-prodigy_2.2.5-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmc/CFYSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHbFAP9iKvbJlbmOJ8Cc6N3oAnsjwsP9kBCJCT uP91AQUHDDck86Und3lZyngrMF43T99B8RFLmPAr2mA2d/2WcK0vPeRlIp8V2TUT 9gybjeRVko4CnH3nv3PwhfuBEVnAXWeEQTGDcaRm1nSJgT1aKMlKYFOgzzpfyVaG lFS8ajkUswKZpOolNyqIG60NAzgHswOW8L+NKNCY0yDu8e4a0VGaxPhSVZx0piM8 cj+x9vq6mLo0MncgC8d+aHclJrr+wcgScsHrQU8Dji06q+/6uBwpmPtGgh+c5UIJ 9ZRqWG8an54gxp6fJmhPSwYPBvXkivHUrUD7BqkU0nGB0t7SCTpiQPeOTxybW3FS ACbTBOw7Q7r93+2mlfwrX26P75AZy/0Q8tqLeeDiA53GKIpIK99R+VQsT7c2BY8O E5+UvJFIKZpBwZVWwLie329CDGe9jKTvYK2gUGtg3lEY2WNM6IFqlUf7/CXFrwGw vZTq6rk2bN6y6Kp9EzQof66ByJZLHFGk20UqbK2GQwGtoFNHirHkFdYz6roCUvX9 XPVnd54B71k7pTMlqOYjTmwlJj2yRG3hXzAhhavcaT1GmEqPEM0uOUA2NiwVNg5W l+1oKIsdVUybF2DwdqZLzeDxlObTR3PVRovZLG9BDyuVgcS+hFV/cH0kj5c7/WyY MxPqlu3tNTU= =yTq+ -----END PGP SIGNATURE----- Sat Apr 19 11:04:43 UTC 2025 I: Checking whether the package is not for us Sat Apr 19 11:04:43 UTC 2025 I: Starting 1st build on remote node ionos16-i386.debian.net. Sat Apr 19 11:04:43 UTC 2025 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Sat Apr 19 11:04:43 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos16-i386.debian.net is marked as down. Sat Apr 19 11:04:43 UTC 2025 - checking via ssh if ionos16-i386.debian.net is up. removed '/tmp/read-only-fs-test-UBFkMC' ==================================================================================== Fri May 22 17:27:43 UTC 2026 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos16-i386, called using "1 python-prodigy unstable /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh 2.2.5-1" as arguments. Fri May 22 17:27:43 UTC 2026 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-UIjp61PI" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Fri May 22 17:27:43 UTC 2026 I: Downloading source for unstable/python-prodigy=2.2.5-1 Reading package lists... NOTICE: 'python-prodigy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/python-team/packages/python-prodigy.git Please use: git clone https://salsa.debian.org/python-team/packages/python-prodigy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5714 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (dsc) [2228 B] Get:2 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (tar) [5709 kB] Get:3 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (diff) [1972 B] Fetched 5714 kB in 0s (64.3 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'python-prodigy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/python-team/packages/python-prodigy.git Please use: git clone https://salsa.debian.org/python-team/packages/python-prodigy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5714 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (dsc) [2228 B] Get:2 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (tar) [5709 kB] Get:3 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (diff) [1972 B] Fetched 5714 kB in 0s (64.3 MB/s) Download complete and in download only mode ============================================================================= Building python-prodigy in unstable on i386 on ionos16-i386 now. Date: Fri May 22 19:27:43 CEST 2026 Date UTC: Fri May 22 17:27:43 UTC 2026 ============================================================================= W: /root/.pbuilderrc does not exist I: Logging to b1/build.log I: pbuilder: network access will be disabled during build I: Current time: Fri May 22 05:27:43 -12 2026 I: pbuilder-time-stamp: 1779470863 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-prodigy_2.2.5-1.dsc] I: copying [./python-prodigy_2.2.5.orig.tar.gz] I: copying [./python-prodigy_2.2.5-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.5-1.dsc: unsupported subcommand dpkg-source: info: extracting python-prodigy in python-prodigy-2.2.5 dpkg-source: info: unpacking python-prodigy_2.2.5.orig.tar.gz dpkg-source: info: unpacking python-prodigy_2.2.5-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3351/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='e009d5f6a7c84ff292001dcabdd87aec' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3351' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_p4K4 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1 --logfile b1/build.log python-prodigy_2.2.5-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3351/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, pybuild-plugin-pyproject, python3-all, python3-biopython, python3-freesasa, python3-numpy, python3-poetry-core dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-freesasa; however: Package python3-freesasa is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-poetry-core; however: Package python3-poetry-core is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjson-c5{a} liblapack3{a} liblcms2-2{a} liblerc4{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxrender1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-biopython{a} python3-build{a} python3-cairo{a} python3-chardet{a} python3-freesasa{a} python3-freetype{a} python3-installer{a} python3-minimal{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pil{a} python3-poetry-core{a} python3-pyproject-hooks{a} python3-reportlab{a} python3-rlpycairo{a} python3-toml{a} python3-wheel{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile shared-mime-info wget xdg-user-dirs 0 packages upgraded, 112 newly installed, 0 to remove and 0 not upgraded. Need to get 52.5 MB of archives. After unpacking 180 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 liblocale-gettext-perl i386 1.07-7+b1 [15.4 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.3-2 [860 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.3-2 [2268 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.3-1 [27.2 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-2 [260 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.3-2 [1960 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.3-2 [751 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.3-1 [10.2 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.3-1 [28.2 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.2.4+ds-1 [145 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-2 [150 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-19 [735 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-2 [2198 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.2.4+ds-1 [5060 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-5 [117 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-5 [43.5 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.41-4 [98.6 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 43 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20250414 [116 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1+b2 [23.4 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 62 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.3 [318 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 help2man i386 1.49.3 [198 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.3 [403 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-2 [48.2 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.1-1 [1584 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libjson-c5 i386 0.18+ds-1 [48.7 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.3-2 [216 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-3 [360 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.5.0-0.1 [114 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.5.0-0.1 [127 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-3 [55.7 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 python3-wheel all 0.46.1-2 [21.7 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 python3-build all 1.2.2-1 [36.0 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.13.3-1 [1048 B] Get: 102 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 python3-pil i386 11.1.0-5+b1 [518 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 python3-cairo i386 1.27.0-2 [117 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 python3-freetype all 2.5.1-1 [89.3 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 107 http://deb.debian.org/debian unstable/main i386 python3-reportlab all 4.3.1-1 [1158 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 w3c-sgml-lib all 1.3-3 [273 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 python3-biopython i386 1.85+dfsg-4 [1668 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 python3-freesasa i386 2.1.0-3+b5 [154 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 python3-poetry-core all 2.1.2-2 [229 kB] Fetched 52.5 MB in 1s (76.3 MB/s) Preconfiguring packages ... Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7+b1_i386.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package libpython3.13-minimal:i386. Preparing to unpack .../libpython3.13-minimal_3.13.3-2_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.3-2) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.7.1-1_i386.deb ... Unpacking libexpat1:i386 (2.7.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.3-2_i386.deb ... Unpacking python3.13-minimal (3.13.3-2) ... Setting up libpython3.13-minimal:i386 (3.13.3-2) ... Setting up libexpat1:i386 (2.7.1-1) ... Setting up python3.13-minimal (3.13.3-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20176 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.3-1_i386.deb ... Unpacking python3-minimal (3.13.3-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-2_all.deb ... Unpacking tzdata (2025b-2) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../4-libffi8_3.4.7-1_i386.deb ... Unpacking libffi8:i386 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../6-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.3-2_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.3-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.3-2_i386.deb ... Unpacking python3.13 (3.13.3-2) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.13.3-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.13.3-1) ... Setting up python3-minimal (3.13.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21188 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.3-1_i386.deb ... Unpacking python3 (3.13.3-1) ... Selecting previously unselected package python3-numpy-dev:i386. Preparing to unpack .../01-python3-numpy-dev_1%3a2.2.4+ds-1_i386.deb ... Unpacking python3-numpy-dev:i386 (1:2.2.4+ds-1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../02-libblas3_3.12.1-2_i386.deb ... Unpacking libblas3:i386 (3.12.1-2) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../03-libgfortran5_14.2.0-19_i386.deb ... Unpacking libgfortran5:i386 (14.2.0-19) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../04-liblapack3_3.12.1-2_i386.deb ... Unpacking liblapack3:i386 (3.12.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.2.4+ds-1_i386.deb ... Unpacking python3-numpy (1:2.2.4+ds-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../06-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../07-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.46-5_i386.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../09-libmagic1t64_1%3a5.46-5_i386.deb ... Unpacking libmagic1t64:i386 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../10-file_1%3a5.46-5_i386.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../11-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../12-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../13-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../14-bsdextrautils_2.41-4_i386.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../15-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../16-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../17-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../18-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../19-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../20-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../21-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../22-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../23-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../24-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../25-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../28-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../29-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../30-libunistring5_1.3-2_i386.deb ... Unpacking libunistring5:i386 (1.3-2) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../31-libxml2_2.12.7+dfsg+really2.9.14-0.4_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../32-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../33-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../34-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../35-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package dh-python. Preparing to unpack .../36-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../37-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../38-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../39-libfontenc1_1%3a1.1.8-1+b2_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.8-1+b2) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../40-libbrotli1_1.1.0-2+b7_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../41-libpng16-16t64_1.6.47-1.1_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.47-1.1) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../42-libfreetype6_2.13.3+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.13.3+dfsg-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../43-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../44-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../45-xfonts-utils_1%3a7.7+7_i386.deb ... Unpacking xfonts-utils (1:7.7+7) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../46-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../47-fontconfig-config_2.15.0-2.3_i386.deb ... Unpacking fontconfig-config (2.15.0-2.3) ... Selecting previously unselected package help2man. Preparing to unpack .../48-help2man_1.49.3_i386.deb ... Unpacking help2man (1.49.3) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../49-libfontconfig1_2.15.0-2.3_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-2.3) ... Selecting previously unselected package libpixman-1-0:i386. Preparing to unpack .../50-libpixman-1-0_0.44.0-3_i386.deb ... Unpacking libpixman-1-0:i386 (0.44.0-3) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../51-libxau6_1%3a1.0.11-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../52-libxdmcp6_1%3a1.1.5-1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../53-libxcb1_1.17.0-2+b1_i386.deb ... Unpacking libxcb1:i386 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../54-libx11-data_2%3a1.8.12-1_all.deb ... Unpacking libx11-data (2:1.8.12-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../55-libx11-6_2%3a1.8.12-1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.12-1) ... Selecting previously unselected package libxcb-render0:i386. Preparing to unpack .../56-libxcb-render0_1.17.0-2+b1_i386.deb ... Unpacking libxcb-render0:i386 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:i386. Preparing to unpack .../57-libxcb-shm0_1.17.0-2+b1_i386.deb ... Unpacking libxcb-shm0:i386 (1.17.0-2+b1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../58-libxext6_2%3a1.3.4-1+b3_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b3) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../59-libxrender1_1%3a0.9.12-1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.12-1) ... Selecting previously unselected package libcairo2:i386. Preparing to unpack .../60-libcairo2_1.18.4-1+b1_i386.deb ... Unpacking libcairo2:i386 (1.18.4-1+b1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../61-libdeflate0_1.23-2_i386.deb ... Unpacking libdeflate0:i386 (1.23-2) ... Selecting previously unselected package libfribidi0:i386. Preparing to unpack .../62-libfribidi0_1.0.16-1_i386.deb ... Unpacking libfribidi0:i386 (1.0.16-1) ... Selecting previously unselected package libglib2.0-0t64:i386. Preparing to unpack .../63-libglib2.0-0t64_2.84.1-1_i386.deb ... Unpacking libglib2.0-0t64:i386 (2.84.1-1) ... Selecting previously unselected package libgraphite2-3:i386. Preparing to unpack .../64-libgraphite2-3_1.3.14-2+b1_i386.deb ... Unpacking libgraphite2-3:i386 (1.3.14-2+b1) ... Selecting previously unselected package libharfbuzz0b:i386. Preparing to unpack .../65-libharfbuzz0b_10.2.0-1+b1_i386.deb ... Unpacking libharfbuzz0b:i386 (10.2.0-1+b1) ... Selecting previously unselected package libimagequant0:i386. Preparing to unpack .../66-libimagequant0_2.18.0-1+b2_i386.deb ... Unpacking libimagequant0:i386 (2.18.0-1+b2) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../67-libjbig0_2.1-6.1+b2_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1+b2) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../68-libjpeg62-turbo_1%3a2.1.5-3.1_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-3.1) ... Selecting previously unselected package libjson-c5:i386. Preparing to unpack .../69-libjson-c5_0.18+ds-1_i386.deb ... Unpacking libjson-c5:i386 (0.18+ds-1) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../70-liblcms2-2_2.16-2_i386.deb ... Unpacking liblcms2-2:i386 (2.16-2) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../71-liblerc4_4.0.0+ds-5_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-5) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../72-libopenjp2-7_2.5.3-2_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.3-2) ... Selecting previously unselected package libraqm0:i386. Preparing to unpack .../73-libraqm0_0.10.2-1_i386.deb ... Unpacking libraqm0:i386 (0.10.2-1) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../74-libsharpyuv0_1.5.0-0.1_i386.deb ... Unpacking libsharpyuv0:i386 (1.5.0-0.1) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../75-libwebp7_1.5.0-0.1_i386.deb ... Unpacking libwebp7:i386 (1.5.0-0.1) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../76-libtiff6_4.7.0-3_i386.deb ... Unpacking libtiff6:i386 (4.7.0-3) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../77-libwebpdemux2_1.5.0-0.1_i386.deb ... Unpacking libwebpdemux2:i386 (1.5.0-0.1) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../78-libwebpmux3_1.5.0-0.1_i386.deb ... Unpacking libwebpmux3:i386 (1.5.0-0.1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../79-python3-packaging_24.2-3_all.deb ... Unpacking python3-packaging (24.2-3) ... Selecting previously unselected package python3-pyproject-hooks. Preparing to unpack .../80-python3-pyproject-hooks_1.2.0-1_all.deb ... Unpacking python3-pyproject-hooks (1.2.0-1) ... Selecting previously unselected package python3-toml. Preparing to unpack .../81-python3-toml_0.10.2-1_all.deb ... Unpacking python3-toml (0.10.2-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../82-python3-wheel_0.46.1-2_all.deb ... Unpacking python3-wheel (0.46.1-2) ... Selecting previously unselected package python3-build. Preparing to unpack .../83-python3-build_1.2.2-1_all.deb ... Unpacking python3-build (1.2.2-1) ... Selecting previously unselected package python3-installer. Preparing to unpack .../84-python3-installer_0.7.0+dfsg1-3_all.deb ... Unpacking python3-installer (0.7.0+dfsg1-3) ... Selecting previously unselected package pybuild-plugin-pyproject. Preparing to unpack .../85-pybuild-plugin-pyproject_6.20250414_all.deb ... Unpacking pybuild-plugin-pyproject (6.20250414) ... Selecting previously unselected package python3-all. Preparing to unpack .../86-python3-all_3.13.3-1_i386.deb ... Unpacking python3-all (3.13.3-1) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../87-python3-chardet_5.2.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-2) ... Selecting previously unselected package python3-pil:i386. Preparing to unpack .../88-python3-pil_11.1.0-5+b1_i386.deb ... Unpacking python3-pil:i386 (11.1.0-5+b1) ... Selecting previously unselected package python3-cairo. Preparing to unpack .../89-python3-cairo_1.27.0-2_i386.deb ... Unpacking python3-cairo (1.27.0-2) ... Selecting previously unselected package python3-freetype. Preparing to unpack .../90-python3-freetype_2.5.1-1_all.deb ... Unpacking python3-freetype (2.5.1-1) ... Selecting previously unselected package python3-rlpycairo. Preparing to unpack .../91-python3-rlpycairo_0.3.0-3_all.deb ... Unpacking python3-rlpycairo (0.3.0-3) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../92-python3-reportlab_4.3.1-1_all.deb ... Unpacking python3-reportlab (4.3.1-1) ... Selecting previously unselected package xml-core. Preparing to unpack .../93-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../94-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../95-python3-biopython_1.85+dfsg-4_i386.deb ... Unpacking python3-biopython (1.85+dfsg-4) ... Selecting previously unselected package python3-freesasa. Preparing to unpack .../96-python3-freesasa_2.1.0-3+b5_i386.deb ... Unpacking python3-freesasa (2.1.0-3+b5) ... Selecting previously unselected package python3-poetry-core. Preparing to unpack .../97-python3-poetry-core_2.1.2-2_all.deb ... Unpacking python3-poetry-core (2.1.2-2) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libgraphite2-3:i386 (1.3.14-2+b1) ... Setting up liblcms2-2:i386 (2.16-2) ... Setting up libpixman-1-0:i386 (0.44.0-3) ... Setting up libsharpyuv0:i386 (1.5.0-0.1) ... Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up liblerc4:i386 (4.0.0+ds-5) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libxcb-render0:i386 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libbrotli1:i386 (1.1.0-2+b7) ... Setting up libmagic1t64:i386 (1:5.46-5) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:i386 (1.23-2) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up file (1:5.46-5) ... Setting up libjbig0:i386 (2.1-6.1+b2) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up tzdata (2025b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Fri May 22 17:28:05 UTC 2026. Universal Time is now: Fri May 22 17:28:05 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:i386 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libjpeg62-turbo:i386 (1:2.1.5-3.1) ... Setting up libx11-data (2:1.8.12-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:i386 (1.0.16-1) ... Setting up libimagequant0:i386 (2.18.0-1+b2) ... Setting up libunistring5:i386 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.47-1.1) ... Setting up python3-numpy-dev:i386 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libgfortran5:i386 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libwebp7:i386 (1.5.0-0.1) ... Setting up libffi8:i386 (3.4.7-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:i386 (4.7.0-3) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libopenjp2-7:i386 (2.5.3-2) ... Setting up libx11-6:i386 (2:1.8.12-1) ... Setting up netbase (6.5) ... Setting up sgml-base (1.31) ... Setting up libwebpmux3:i386 (1.5.0-0.1) ... Setting up libjson-c5:i386 (0.18+ds-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.23.1-1) ... Setting up libxrender1:i386 (1:0.9.12-1) ... Setting up libtool (2.5.4-4) ... Setting up fontconfig-config (2.15.0-2.3) ... Setting up libwebpdemux2:i386 (1.5.0-0.1) ... Setting up libxext6:i386 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libglib2.0-0t64:i386 (2.84.1-1) ... No schema files found: doing nothing. Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:i386 (10.2.0-1+b1) ... Setting up libfontconfig1:i386 (2.15.0-2.3) ... Setting up libpython3.13-stdlib:i386 (3.13.3-2) ... Setting up libpython3-stdlib:i386 (3.13.3-1) ... Setting up python3.13 (3.13.3-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.3-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.4-1+b1) ... Setting up python3-freesasa (2.1.0-3+b5) ... Setting up python3-packaging (24.2-3) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-poetry-core (2.1.2-2) ... Setting up libraqm0:i386 (0.10.2-1) ... Setting up python3-numpy (1:2.2.4+ds-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up dh-python (6.20250414) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-all (3.13.3-1) ... Setting up debhelper (13.24.2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-pil:i386 (11.1.0-5+b1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-reportlab (4.3.1-1) ... Setting up python3-build (1.2.2-1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Processing triggers for libc-bin (2.41-7) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-prodigy-2.2.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-prodigy_2.2.5-1_source.changes dpkg-buildpackage: info: source package python-prodigy dpkg-buildpackage: info: source version 2.2.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-prodigy-2.2.5' rm -rf prodigy.egg-info make[1]: Leaving directory '/build/reproducible-path/python-prodigy-2.2.5' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-prodigy-2.2.5/.pybuild/cpython3_3.13_prodigy * Building wheel... Successfully built prodigy_prot-2.2.5-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-prodigy-2.2.5/.pybuild/cpython3_3.13_prodigy/build; python3.13 -m unittest discover -v test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) Test method to compare prediction for 80 dataset cases with ... ok ---------------------------------------------------------------------- Ran 1 test in 28.146s OK Deltas: ba_val max: 1.03% ba_val mean: 0.29% nis_a max: 0.53% nis_a mean: 0.02% nis_c max: 0.44% nis_c mean: 0.02% create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-prodigy/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules execute_before_dh_installman make[1]: Entering directory '/build/reproducible-path/python-prodigy-2.2.5' PYTHONPATH=src help2man debian/python3-prodigy/usr/bin/prodigy --no-info \ --name 'binding affinity predictor' \ --version-string 2.2.5 > prodigy.1 make[1]: Leaving directory '/build/reproducible-path/python-prodigy-2.2.5' dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/python3-prodigy/usr/bin/prodigy dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-prodigy' in '../python3-prodigy_2.2.5-1_all.deb'. dpkg-genbuildinfo --build=binary -O../python-prodigy_2.2.5-1_i386.buildinfo dpkg-genchanges --build=binary -O../python-prodigy_2.2.5-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3351 and its subdirectories I: Current time: Fri May 22 05:29:19 -12 2026 I: pbuilder-time-stamp: 1779470959 Fri May 22 17:29:19 UTC 2026 I: Signing ./b1/python-prodigy_2.2.5-1_i386.buildinfo as python-prodigy_2.2.5-1_i386.buildinfo.asc Fri May 22 17:29:19 UTC 2026 I: Signed ./b1/python-prodigy_2.2.5-1_i386.buildinfo as ./b1/python-prodigy_2.2.5-1_i386.buildinfo.asc Fri May 22 17:29:19 UTC 2026 - build #1 for python-prodigy/unstable/i386 on ionos16-i386 done. Starting cleanup. All cleanup done. Fri May 22 17:29:19 UTC 2026 - reproducible_build.sh stopped running as /tmp/jenkins-script-UIjp61PI, removing. /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh: total 16 drwxr-xr-x 2 jenkins jenkins 4096 Apr 19 11:06 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 19 11:04 b2 -rw-r--r-- 1 jenkins jenkins 2228 Nov 21 10:27 python-prodigy_2.2.5-1.dsc -rw------- 1 jenkins jenkins 3374 Apr 19 11:04 rbuildlog.5t4ZzTg /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1: total 5676 -rw-r--r-- 1 jenkins jenkins 49594 Apr 19 11:06 build.log -rw-r--r-- 1 jenkins jenkins 1972 Apr 19 11:06 python-prodigy_2.2.5-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2228 Apr 19 11:06 python-prodigy_2.2.5-1.dsc -rw-r--r-- 1 jenkins jenkins 7028 Apr 19 11:06 python-prodigy_2.2.5-1_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 7910 Apr 19 11:06 python-prodigy_2.2.5-1_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1058 Apr 19 11:06 python-prodigy_2.2.5-1_i386.changes -rw-r--r-- 1 jenkins jenkins 1507 Apr 19 11:06 python-prodigy_2.2.5-1_source.changes -rw-r--r-- 1 jenkins jenkins 5709417 Apr 19 11:06 python-prodigy_2.2.5.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 15276 Apr 19 11:06 python3-prodigy_2.2.5-1_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2: total 0 Sat Apr 19 11:06:21 UTC 2025 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 22 05:27:43 -12 2026 I: pbuilder-time-stamp: 1779470863 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-prodigy_2.2.5-1.dsc] I: copying [./python-prodigy_2.2.5.orig.tar.gz] I: copying [./python-prodigy_2.2.5-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.5-1.dsc: unsupported subcommand dpkg-source: info: extracting python-prodigy in python-prodigy-2.2.5 dpkg-source: info: unpacking python-prodigy_2.2.5.orig.tar.gz dpkg-source: info: unpacking python-prodigy_2.2.5-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3351/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='e009d5f6a7c84ff292001dcabdd87aec' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3351' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_p4K4 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1 --logfile b1/build.log python-prodigy_2.2.5-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos16-i386 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3351/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, pybuild-plugin-pyproject, python3-all, python3-biopython, python3-freesasa, python3-numpy, python3-poetry-core dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-freesasa; however: Package python3-freesasa is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-poetry-core; however: Package python3-poetry-core is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjson-c5{a} liblapack3{a} liblcms2-2{a} liblerc4{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxrender1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-biopython{a} python3-build{a} python3-cairo{a} python3-chardet{a} python3-freesasa{a} python3-freetype{a} python3-installer{a} python3-minimal{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pil{a} python3-poetry-core{a} python3-pyproject-hooks{a} python3-reportlab{a} python3-rlpycairo{a} python3-toml{a} python3-wheel{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile shared-mime-info wget xdg-user-dirs 0 packages upgraded, 112 newly installed, 0 to remove and 0 not upgraded. Need to get 52.5 MB of archives. After unpacking 180 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 liblocale-gettext-perl i386 1.07-7+b1 [15.4 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.3-2 [860 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.3-2 [2268 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.3-1 [27.2 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-2 [260 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.3-2 [1960 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.3-2 [751 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.3-1 [10.2 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.3-1 [28.2 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.2.4+ds-1 [145 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-2 [150 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-19 [735 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-2 [2198 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.2.4+ds-1 [5060 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-5 [117 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-5 [43.5 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.41-4 [98.6 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 43 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20250414 [116 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1+b2 [23.4 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 62 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.3 [318 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 help2man i386 1.49.3 [198 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.3 [403 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-2 [48.2 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.1-1 [1584 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libjson-c5 i386 0.18+ds-1 [48.7 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.3-2 [216 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-3 [360 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.5.0-0.1 [114 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.5.0-0.1 [127 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-3 [55.7 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 python3-wheel all 0.46.1-2 [21.7 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 python3-build all 1.2.2-1 [36.0 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.13.3-1 [1048 B] Get: 102 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 python3-pil i386 11.1.0-5+b1 [518 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 python3-cairo i386 1.27.0-2 [117 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 python3-freetype all 2.5.1-1 [89.3 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 107 http://deb.debian.org/debian unstable/main i386 python3-reportlab all 4.3.1-1 [1158 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 w3c-sgml-lib all 1.3-3 [273 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 python3-biopython i386 1.85+dfsg-4 [1668 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 python3-freesasa i386 2.1.0-3+b5 [154 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 python3-poetry-core all 2.1.2-2 [229 kB] Fetched 52.5 MB in 1s (76.3 MB/s) Preconfiguring packages ... Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7+b1_i386.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package libpython3.13-minimal:i386. Preparing to unpack .../libpython3.13-minimal_3.13.3-2_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.3-2) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.7.1-1_i386.deb ... Unpacking libexpat1:i386 (2.7.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.3-2_i386.deb ... Unpacking python3.13-minimal (3.13.3-2) ... Setting up libpython3.13-minimal:i386 (3.13.3-2) ... Setting up libexpat1:i386 (2.7.1-1) ... Setting up python3.13-minimal (3.13.3-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20176 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.3-1_i386.deb ... Unpacking python3-minimal (3.13.3-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-2_all.deb ... Unpacking tzdata (2025b-2) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../4-libffi8_3.4.7-1_i386.deb ... Unpacking libffi8:i386 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../6-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.3-2_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.3-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.3-2_i386.deb ... Unpacking python3.13 (3.13.3-2) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.13.3-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.13.3-1) ... Setting up python3-minimal (3.13.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21188 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.3-1_i386.deb ... Unpacking python3 (3.13.3-1) ... Selecting previously unselected package python3-numpy-dev:i386. Preparing to unpack .../01-python3-numpy-dev_1%3a2.2.4+ds-1_i386.deb ... Unpacking python3-numpy-dev:i386 (1:2.2.4+ds-1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../02-libblas3_3.12.1-2_i386.deb ... Unpacking libblas3:i386 (3.12.1-2) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../03-libgfortran5_14.2.0-19_i386.deb ... Unpacking libgfortran5:i386 (14.2.0-19) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../04-liblapack3_3.12.1-2_i386.deb ... Unpacking liblapack3:i386 (3.12.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.2.4+ds-1_i386.deb ... Unpacking python3-numpy (1:2.2.4+ds-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../06-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../07-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.46-5_i386.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../09-libmagic1t64_1%3a5.46-5_i386.deb ... Unpacking libmagic1t64:i386 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../10-file_1%3a5.46-5_i386.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../11-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../12-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../13-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../14-bsdextrautils_2.41-4_i386.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../15-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../16-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../17-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../18-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../19-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../20-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../21-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../22-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../23-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../24-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../25-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../28-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../29-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../30-libunistring5_1.3-2_i386.deb ... Unpacking libunistring5:i386 (1.3-2) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../31-libxml2_2.12.7+dfsg+really2.9.14-0.4_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../32-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../33-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../34-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../35-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package dh-python. Preparing to unpack .../36-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../37-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../38-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../39-libfontenc1_1%3a1.1.8-1+b2_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.8-1+b2) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../40-libbrotli1_1.1.0-2+b7_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../41-libpng16-16t64_1.6.47-1.1_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.47-1.1) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../42-libfreetype6_2.13.3+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.13.3+dfsg-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../43-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../44-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../45-xfonts-utils_1%3a7.7+7_i386.deb ... Unpacking xfonts-utils (1:7.7+7) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../46-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../47-fontconfig-config_2.15.0-2.3_i386.deb ... Unpacking fontconfig-config (2.15.0-2.3) ... Selecting previously unselected package help2man. Preparing to unpack .../48-help2man_1.49.3_i386.deb ... Unpacking help2man (1.49.3) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../49-libfontconfig1_2.15.0-2.3_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-2.3) ... Selecting previously unselected package libpixman-1-0:i386. Preparing to unpack .../50-libpixman-1-0_0.44.0-3_i386.deb ... Unpacking libpixman-1-0:i386 (0.44.0-3) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../51-libxau6_1%3a1.0.11-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../52-libxdmcp6_1%3a1.1.5-1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../53-libxcb1_1.17.0-2+b1_i386.deb ... Unpacking libxcb1:i386 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../54-libx11-data_2%3a1.8.12-1_all.deb ... Unpacking libx11-data (2:1.8.12-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../55-libx11-6_2%3a1.8.12-1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.12-1) ... Selecting previously unselected package libxcb-render0:i386. Preparing to unpack .../56-libxcb-render0_1.17.0-2+b1_i386.deb ... Unpacking libxcb-render0:i386 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:i386. Preparing to unpack .../57-libxcb-shm0_1.17.0-2+b1_i386.deb ... Unpacking libxcb-shm0:i386 (1.17.0-2+b1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../58-libxext6_2%3a1.3.4-1+b3_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b3) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../59-libxrender1_1%3a0.9.12-1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.12-1) ... Selecting previously unselected package libcairo2:i386. Preparing to unpack .../60-libcairo2_1.18.4-1+b1_i386.deb ... Unpacking libcairo2:i386 (1.18.4-1+b1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../61-libdeflate0_1.23-2_i386.deb ... Unpacking libdeflate0:i386 (1.23-2) ... Selecting previously unselected package libfribidi0:i386. Preparing to unpack .../62-libfribidi0_1.0.16-1_i386.deb ... Unpacking libfribidi0:i386 (1.0.16-1) ... Selecting previously unselected package libglib2.0-0t64:i386. Preparing to unpack .../63-libglib2.0-0t64_2.84.1-1_i386.deb ... Unpacking libglib2.0-0t64:i386 (2.84.1-1) ... Selecting previously unselected package libgraphite2-3:i386. Preparing to unpack .../64-libgraphite2-3_1.3.14-2+b1_i386.deb ... Unpacking libgraphite2-3:i386 (1.3.14-2+b1) ... Selecting previously unselected package libharfbuzz0b:i386. Preparing to unpack .../65-libharfbuzz0b_10.2.0-1+b1_i386.deb ... Unpacking libharfbuzz0b:i386 (10.2.0-1+b1) ... Selecting previously unselected package libimagequant0:i386. Preparing to unpack .../66-libimagequant0_2.18.0-1+b2_i386.deb ... Unpacking libimagequant0:i386 (2.18.0-1+b2) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../67-libjbig0_2.1-6.1+b2_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1+b2) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../68-libjpeg62-turbo_1%3a2.1.5-3.1_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-3.1) ... Selecting previously unselected package libjson-c5:i386. Preparing to unpack .../69-libjson-c5_0.18+ds-1_i386.deb ... Unpacking libjson-c5:i386 (0.18+ds-1) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../70-liblcms2-2_2.16-2_i386.deb ... Unpacking liblcms2-2:i386 (2.16-2) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../71-liblerc4_4.0.0+ds-5_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-5) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../72-libopenjp2-7_2.5.3-2_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.3-2) ... Selecting previously unselected package libraqm0:i386. Preparing to unpack .../73-libraqm0_0.10.2-1_i386.deb ... Unpacking libraqm0:i386 (0.10.2-1) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../74-libsharpyuv0_1.5.0-0.1_i386.deb ... Unpacking libsharpyuv0:i386 (1.5.0-0.1) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../75-libwebp7_1.5.0-0.1_i386.deb ... Unpacking libwebp7:i386 (1.5.0-0.1) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../76-libtiff6_4.7.0-3_i386.deb ... Unpacking libtiff6:i386 (4.7.0-3) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../77-libwebpdemux2_1.5.0-0.1_i386.deb ... Unpacking libwebpdemux2:i386 (1.5.0-0.1) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../78-libwebpmux3_1.5.0-0.1_i386.deb ... Unpacking libwebpmux3:i386 (1.5.0-0.1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../79-python3-packaging_24.2-3_all.deb ... Unpacking python3-packaging (24.2-3) ... Selecting previously unselected package python3-pyproject-hooks. Preparing to unpack .../80-python3-pyproject-hooks_1.2.0-1_all.deb ... Unpacking python3-pyproject-hooks (1.2.0-1) ... Selecting previously unselected package python3-toml. Preparing to unpack .../81-python3-toml_0.10.2-1_all.deb ... Unpacking python3-toml (0.10.2-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../82-python3-wheel_0.46.1-2_all.deb ... Unpacking python3-wheel (0.46.1-2) ... Selecting previously unselected package python3-build. Preparing to unpack .../83-python3-build_1.2.2-1_all.deb ... Unpacking python3-build (1.2.2-1) ... Selecting previously unselected package python3-installer. Preparing to unpack .../84-python3-installer_0.7.0+dfsg1-3_all.deb ... Unpacking python3-installer (0.7.0+dfsg1-3) ... Selecting previously unselected package pybuild-plugin-pyproject. Preparing to unpack .../85-pybuild-plugin-pyproject_6.20250414_all.deb ... Unpacking pybuild-plugin-pyproject (6.20250414) ... Selecting previously unselected package python3-all. Preparing to unpack .../86-python3-all_3.13.3-1_i386.deb ... Unpacking python3-all (3.13.3-1) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../87-python3-chardet_5.2.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-2) ... Selecting previously unselected package python3-pil:i386. Preparing to unpack .../88-python3-pil_11.1.0-5+b1_i386.deb ... Unpacking python3-pil:i386 (11.1.0-5+b1) ... Selecting previously unselected package python3-cairo. Preparing to unpack .../89-python3-cairo_1.27.0-2_i386.deb ... Unpacking python3-cairo (1.27.0-2) ... Selecting previously unselected package python3-freetype. Preparing to unpack .../90-python3-freetype_2.5.1-1_all.deb ... Unpacking python3-freetype (2.5.1-1) ... Selecting previously unselected package python3-rlpycairo. Preparing to unpack .../91-python3-rlpycairo_0.3.0-3_all.deb ... Unpacking python3-rlpycairo (0.3.0-3) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../92-python3-reportlab_4.3.1-1_all.deb ... Unpacking python3-reportlab (4.3.1-1) ... Selecting previously unselected package xml-core. Preparing to unpack .../93-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../94-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../95-python3-biopython_1.85+dfsg-4_i386.deb ... Unpacking python3-biopython (1.85+dfsg-4) ... Selecting previously unselected package python3-freesasa. Preparing to unpack .../96-python3-freesasa_2.1.0-3+b5_i386.deb ... Unpacking python3-freesasa (2.1.0-3+b5) ... Selecting previously unselected package python3-poetry-core. Preparing to unpack .../97-python3-poetry-core_2.1.2-2_all.deb ... Unpacking python3-poetry-core (2.1.2-2) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libgraphite2-3:i386 (1.3.14-2+b1) ... Setting up liblcms2-2:i386 (2.16-2) ... Setting up libpixman-1-0:i386 (0.44.0-3) ... Setting up libsharpyuv0:i386 (1.5.0-0.1) ... Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up liblerc4:i386 (4.0.0+ds-5) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libxcb-render0:i386 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libbrotli1:i386 (1.1.0-2+b7) ... Setting up libmagic1t64:i386 (1:5.46-5) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:i386 (1.23-2) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up file (1:5.46-5) ... Setting up libjbig0:i386 (2.1-6.1+b2) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up tzdata (2025b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Fri May 22 17:28:05 UTC 2026. Universal Time is now: Fri May 22 17:28:05 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:i386 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libjpeg62-turbo:i386 (1:2.1.5-3.1) ... Setting up libx11-data (2:1.8.12-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:i386 (1.0.16-1) ... Setting up libimagequant0:i386 (2.18.0-1+b2) ... Setting up libunistring5:i386 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.47-1.1) ... Setting up python3-numpy-dev:i386 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libgfortran5:i386 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libwebp7:i386 (1.5.0-0.1) ... Setting up libffi8:i386 (3.4.7-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:i386 (4.7.0-3) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libopenjp2-7:i386 (2.5.3-2) ... Setting up libx11-6:i386 (2:1.8.12-1) ... Setting up netbase (6.5) ... Setting up sgml-base (1.31) ... Setting up libwebpmux3:i386 (1.5.0-0.1) ... Setting up libjson-c5:i386 (0.18+ds-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.23.1-1) ... Setting up libxrender1:i386 (1:0.9.12-1) ... Setting up libtool (2.5.4-4) ... Setting up fontconfig-config (2.15.0-2.3) ... Setting up libwebpdemux2:i386 (1.5.0-0.1) ... Setting up libxext6:i386 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libglib2.0-0t64:i386 (2.84.1-1) ... No schema files found: doing nothing. Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:i386 (10.2.0-1+b1) ... Setting up libfontconfig1:i386 (2.15.0-2.3) ... Setting up libpython3.13-stdlib:i386 (3.13.3-2) ... Setting up libpython3-stdlib:i386 (3.13.3-1) ... Setting up python3.13 (3.13.3-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.3-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.4-1+b1) ... Setting up python3-freesasa (2.1.0-3+b5) ... Setting up python3-packaging (24.2-3) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-poetry-core (2.1.2-2) ... Setting up libraqm0:i386 (0.10.2-1) ... Setting up python3-numpy (1:2.2.4+ds-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up dh-python (6.20250414) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-all (3.13.3-1) ... Setting up debhelper (13.24.2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-pil:i386 (11.1.0-5+b1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-reportlab (4.3.1-1) ... Setting up python3-build (1.2.2-1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Processing triggers for libc-bin (2.41-7) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-prodigy-2.2.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-prodigy_2.2.5-1_source.changes dpkg-buildpackage: info: source package python-prodigy dpkg-buildpackage: info: source version 2.2.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-prodigy-2.2.5' rm -rf prodigy.egg-info make[1]: Leaving directory '/build/reproducible-path/python-prodigy-2.2.5' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-prodigy-2.2.5/.pybuild/cpython3_3.13_prodigy * Building wheel... Successfully built prodigy_prot-2.2.5-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-prodigy-2.2.5/.pybuild/cpython3_3.13_prodigy/build; python3.13 -m unittest discover -v test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) Test method to compare prediction for 80 dataset cases with ... ok ---------------------------------------------------------------------- Ran 1 test in 28.146s OK Deltas: ba_val max: 1.03% ba_val mean: 0.29% nis_a max: 0.53% nis_a mean: 0.02% nis_c max: 0.44% nis_c mean: 0.02% create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-prodigy/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules execute_before_dh_installman make[1]: Entering directory '/build/reproducible-path/python-prodigy-2.2.5' PYTHONPATH=src help2man debian/python3-prodigy/usr/bin/prodigy --no-info \ --name 'binding affinity predictor' \ --version-string 2.2.5 > prodigy.1 make[1]: Leaving directory '/build/reproducible-path/python-prodigy-2.2.5' dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/python3-prodigy/usr/bin/prodigy dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-prodigy' in '../python3-prodigy_2.2.5-1_all.deb'. dpkg-genbuildinfo --build=binary -O../python-prodigy_2.2.5-1_i386.buildinfo dpkg-genchanges --build=binary -O../python-prodigy_2.2.5-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3351 and its subdirectories I: Current time: Fri May 22 05:29:19 -12 2026 I: pbuilder-time-stamp: 1779470959 Sat Apr 19 11:06:22 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Sat Apr 19 11:06:22 UTC 2025 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Sat Apr 19 11:06:22 UTC 2025 - checking /var/lib/jenkins/offline_nodes if ionos12-i386.debian.net is marked as down. Sat Apr 19 11:06:22 UTC 2025 - checking via ssh if ionos12-i386.debian.net is up. removed '/tmp/read-only-fs-test-6oE4eU' ==================================================================================== Sat Apr 19 11:06:22 UTC 2025 - running /srv/jenkins/bin/reproducible_build.sh (for job /srv/jenkins/bin/reproducible_build.sh) on ionos12-i386, called using "2 python-prodigy unstable /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh 2.2.5-1" as arguments. Sat Apr 19 11:06:22 UTC 2025 - actually running "reproducible_build.sh" (md5sum 68e686e434c9ab7bc3ec047d8b309cbc) as "/tmp/jenkins-script-GU6QlI6w" $ git clone https://salsa.debian.org/qa/jenkins.debian.net.git ; more CONTRIBUTING Sat Apr 19 11:06:23 UTC 2025 I: Downloading source for unstable/python-prodigy=2.2.5-1 Reading package lists... NOTICE: 'python-prodigy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/python-team/packages/python-prodigy.git Please use: git clone https://salsa.debian.org/python-team/packages/python-prodigy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5714 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (dsc) [2228 B] Get:2 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (tar) [5709 kB] Get:3 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (diff) [1972 B] Fetched 5714 kB in 0s (73.8 MB/s) Download complete and in download only mode Reading package lists... NOTICE: 'python-prodigy' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/python-team/packages/python-prodigy.git Please use: git clone https://salsa.debian.org/python-team/packages/python-prodigy.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5714 kB of source archives. Get:1 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (dsc) [2228 B] Get:2 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (tar) [5709 kB] Get:3 http://deb.debian.org/debian unstable/main python-prodigy 2.2.5-1 (diff) [1972 B] Fetched 5714 kB in 0s (73.8 MB/s) Download complete and in download only mode ============================================================================= Re-Building python-prodigy in unstable on i386 on ionos12-i386 now. Date: Sat Apr 19 13:06:23 CEST 2025 Date UTC: Sat Apr 19 11:06:23 UTC 2025 ============================================================================= ++ mktemp -t pbuilderrc_XXXX --tmpdir=/srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh + local TMPCFG=/srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_Gmib + case ${ARCH} in + let NUM_CPU-=3 + case $ARCH in + locale=de_CH + language=de + case "${SUITE}" in + reproducible_buildflags=+all + extra_deb_build_options= + case "${SRCPACKAGE}" in + cat + echo BUILDDIR=/build/reproducible-path + '[' python-prodigy = debian-installer -o python-prodigy = debian-installer-netboot-images ']' + pbuilder_options=() + local pbuilder_options + DEBBUILDOPTS=-b + BINARYTARGET= + '[' python-prodigy = u-boot ']' + case "${SRCPACKAGE}" in + PBUILDERTIMEOUT=24 + local PRESULT=0 + sudo timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_Gmib --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2 --logfile b2/build.log python-prodigy_2.2.5-1.dsc W: /root/.pbuilderrc does not exist I: Logging to b2/build.log I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 20 01:06:23 +14 2025 I: pbuilder-time-stamp: 1745060783 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-prodigy_2.2.5-1.dsc] I: copying [./python-prodigy_2.2.5.orig.tar.gz] I: copying [./python-prodigy_2.2.5-1.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-prodigy_2.2.5-1.dsc: unsupported subcommand dpkg-source: info: extracting python-prodigy in python-prodigy-2.2.5 dpkg-source: info: unpacking python-prodigy_2.2.5.orig.tar.gz dpkg-source: info: unpacking python-prodigy_2.2.5-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D01_modify_environment starting debug: Running on ionos12-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 19 11:06 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=23 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=33ab941b78b74e348197bb561e059c51 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=35651 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_Gmib --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2 --logfile b2/build.log python-prodigy_2.2.5-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, pybuild-plugin-pyproject, python3-all, python3-biopython, python3-freesasa, python3-numpy, python3-poetry-core dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-freesasa; however: Package python3-freesasa is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-poetry-core; however: Package python3-poetry-core is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libffi8{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjson-c5{a} liblapack3{a} liblcms2-2{a} liblerc4{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libraqm0{a} libreadline8t64{a} libsharpyuv0{a} libtiff6{a} libtool{a} libuchardet0{a} libunistring5{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxrender1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-biopython{a} python3-build{a} python3-cairo{a} python3-chardet{a} python3-freesasa{a} python3-freetype{a} python3-installer{a} python3-minimal{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pil{a} python3-poetry-core{a} python3-pyproject-hooks{a} python3-reportlab{a} python3-rlpycairo{a} python3-toml{a} python3-wheel{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} tzdata{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl fonts-dejavu-extra libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx ncbi-blast+ python-biopython-doc python3-olefile shared-mime-info wget xdg-user-dirs 0 packages upgraded, 112 newly installed, 0 to remove and 0 not upgraded. Need to get 52.5 MB of archives. After unpacking 180 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 liblocale-gettext-perl i386 1.07-7+b1 [15.4 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libpython3.13-minimal i386 3.13.3-2 [860 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.7.1-1 [110 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3.13-minimal i386 3.13.3-2 [2268 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.13.3-1 [27.2 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 media-types all 13.0.0 [29.3 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 netbase all 6.5 [12.4 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 tzdata all 2025b-2 [260 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libffi8 i386 3.4.7-1 [21.4 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-6 [69.4 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-6 [173 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libpython3.13-stdlib i386 3.13.3-2 [1960 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 python3.13 i386 3.13.3-2 [751 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.13.3-1 [10.2 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 python3 i386 3.13.3-1 [28.2 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 python3-numpy-dev i386 1:2.2.4+ds-1 [145 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.1-2 [150 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.2.0-19 [735 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.1-2 [2198 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:2.2.4+ds-1 [5060 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 sgml-base all 1.31 [15.4 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.46-5 [117 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 file i386 1:5.46-5 [43.5 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.23.1-1 [245 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-7 [1199 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.41-4 [98.6 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-7 [301 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 autopoint all 0.23.1-1 [770 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.24.2 [90.9 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libtool all 2.5.4-4 [539 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get: 43 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libunistring5 i386 1.3-2 [471 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.4 [732 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 gettext i386 0.23.1-1 [1714 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 debhelper all 13.24.2 [919 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20250414 [116 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libfontenc1 i386 1:1.1.8-1+b2 [23.4 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b7 [299 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.47-1.1 [289 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+24 [217 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 62 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-2.3 [318 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 help2man i386 1.49.3 [198 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-2.3 [403 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.12-1 [343 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.12-1 [838 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b3 [52.5 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.12-1 [29.0 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.4-1+b1 [596 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.23-2 [48.2 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.16-1 [27.0 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.84.1-1 [1584 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 10.2.0-1+b1 [505 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3.1 [170 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libjson-c5 i386 0.18+ds-1 [48.7 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libopenjp2-7 i386 2.5.3-2 [216 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 libraqm0 i386 0.10.2-1 [14.6 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.5.0-0.1 [115 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.5.0-0.1 [329 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.7.0-3 [360 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libwebpdemux2 i386 1.5.0-0.1 [114 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libwebpmux3 i386 1.5.0-0.1 [127 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.2-3 [55.7 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 python3-wheel all 0.46.1-2 [21.7 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 python3-build all 1.2.2-1 [36.0 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.13.3-1 [1048 B] Get: 102 http://deb.debian.org/debian unstable/main i386 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 python3-pil i386 11.1.0-5+b1 [518 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 python3-cairo i386 1.27.0-2 [117 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 python3-freetype all 2.5.1-1 [89.3 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 107 http://deb.debian.org/debian unstable/main i386 python3-reportlab all 4.3.1-1 [1158 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 xml-core all 0.19 [20.1 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 w3c-sgml-lib all 1.3-3 [273 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 python3-biopython i386 1.85+dfsg-4 [1668 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 python3-freesasa i386 2.1.0-3+b5 [154 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 python3-poetry-core all 2.1.2-2 [229 kB] Fetched 52.5 MB in 2s (29.0 MB/s) Preconfiguring packages ... Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19827 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7+b1_i386.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package libpython3.13-minimal:i386. Preparing to unpack .../libpython3.13-minimal_3.13.3-2_i386.deb ... Unpacking libpython3.13-minimal:i386 (3.13.3-2) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.7.1-1_i386.deb ... Unpacking libexpat1:i386 (2.7.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.3-2_i386.deb ... Unpacking python3.13-minimal (3.13.3-2) ... Setting up libpython3.13-minimal:i386 (3.13.3-2) ... Setting up libexpat1:i386 (2.7.1-1) ... Setting up python3.13-minimal (3.13.3-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20176 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.3-1_i386.deb ... Unpacking python3-minimal (3.13.3-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-2_all.deb ... Unpacking tzdata (2025b-2) ... Selecting previously unselected package libffi8:i386. Preparing to unpack .../4-libffi8_3.4.7-1_i386.deb ... Unpacking libffi8:i386 (3.4.7-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../6-libreadline8t64_8.2-6_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-6) ... Selecting previously unselected package libpython3.13-stdlib:i386. Preparing to unpack .../7-libpython3.13-stdlib_3.13.3-2_i386.deb ... Unpacking libpython3.13-stdlib:i386 (3.13.3-2) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.3-2_i386.deb ... Unpacking python3.13 (3.13.3-2) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.13.3-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.13.3-1) ... Setting up python3-minimal (3.13.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21188 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.3-1_i386.deb ... Unpacking python3 (3.13.3-1) ... Selecting previously unselected package python3-numpy-dev:i386. Preparing to unpack .../01-python3-numpy-dev_1%3a2.2.4+ds-1_i386.deb ... Unpacking python3-numpy-dev:i386 (1:2.2.4+ds-1) ... Selecting previously unselected package libblas3:i386. Preparing to unpack .../02-libblas3_3.12.1-2_i386.deb ... Unpacking libblas3:i386 (3.12.1-2) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../03-libgfortran5_14.2.0-19_i386.deb ... Unpacking libgfortran5:i386 (14.2.0-19) ... Selecting previously unselected package liblapack3:i386. Preparing to unpack .../04-liblapack3_3.12.1-2_i386.deb ... Unpacking liblapack3:i386 (3.12.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.2.4+ds-1_i386.deb ... Unpacking python3-numpy (1:2.2.4+ds-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../06-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../07-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.46-5_i386.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../09-libmagic1t64_1%3a5.46-5_i386.deb ... Unpacking libmagic1t64:i386 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../10-file_1%3a5.46-5_i386.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../11-gettext-base_0.23.1-1_i386.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../12-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../13-groff-base_1.23.0-7_i386.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../14-bsdextrautils_2.41-4_i386.deb ... Unpacking bsdextrautils (2.41-4) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../15-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../16-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../17-m4_1.4.19-7_i386.deb ... Unpacking m4 (1.4.19-7) ... Selecting previously unselected package autoconf. Preparing to unpack .../18-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../19-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../20-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../21-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../22-libdebhelper-perl_13.24.2_all.deb ... Unpacking libdebhelper-perl (13.24.2) ... Selecting previously unselected package libtool. Preparing to unpack .../23-libtool_2.5.4-4_all.deb ... Unpacking libtool (2.5.4-4) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../24-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../25-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.14.1-2_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../28-libelf1t64_0.192-4_i386.deb ... Unpacking libelf1t64:i386 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../29-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:i386. Preparing to unpack .../30-libunistring5_1.3-2_i386.deb ... Unpacking libunistring5:i386 (1.3-2) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../31-libxml2_2.12.7+dfsg+really2.9.14-0.4_i386.deb ... Unpacking libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Selecting previously unselected package gettext. Preparing to unpack .../32-gettext_0.23.1-1_i386.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../33-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../34-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../35-debhelper_13.24.2_all.deb ... Unpacking debhelper (13.24.2) ... Selecting previously unselected package dh-python. Preparing to unpack .../36-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../37-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../38-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package libfontenc1:i386. Preparing to unpack .../39-libfontenc1_1%3a1.1.8-1+b2_i386.deb ... Unpacking libfontenc1:i386 (1:1.1.8-1+b2) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../40-libbrotli1_1.1.0-2+b7_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b7) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../41-libpng16-16t64_1.6.47-1.1_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.47-1.1) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../42-libfreetype6_2.13.3+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.13.3+dfsg-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../43-x11-common_1%3a7.7+24_all.deb ... Unpacking x11-common (1:7.7+24) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../44-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../45-xfonts-utils_1%3a7.7+7_i386.deb ... Unpacking xfonts-utils (1:7.7+7) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../46-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../47-fontconfig-config_2.15.0-2.3_i386.deb ... Unpacking fontconfig-config (2.15.0-2.3) ... Selecting previously unselected package help2man. Preparing to unpack .../48-help2man_1.49.3_i386.deb ... Unpacking help2man (1.49.3) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../49-libfontconfig1_2.15.0-2.3_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-2.3) ... Selecting previously unselected package libpixman-1-0:i386. Preparing to unpack .../50-libpixman-1-0_0.44.0-3_i386.deb ... Unpacking libpixman-1-0:i386 (0.44.0-3) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../51-libxau6_1%3a1.0.11-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../52-libxdmcp6_1%3a1.1.5-1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.5-1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../53-libxcb1_1.17.0-2+b1_i386.deb ... Unpacking libxcb1:i386 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../54-libx11-data_2%3a1.8.12-1_all.deb ... Unpacking libx11-data (2:1.8.12-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../55-libx11-6_2%3a1.8.12-1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.12-1) ... Selecting previously unselected package libxcb-render0:i386. Preparing to unpack .../56-libxcb-render0_1.17.0-2+b1_i386.deb ... Unpacking libxcb-render0:i386 (1.17.0-2+b1) ... Selecting previously unselected package libxcb-shm0:i386. Preparing to unpack .../57-libxcb-shm0_1.17.0-2+b1_i386.deb ... Unpacking libxcb-shm0:i386 (1.17.0-2+b1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../58-libxext6_2%3a1.3.4-1+b3_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b3) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../59-libxrender1_1%3a0.9.12-1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.12-1) ... Selecting previously unselected package libcairo2:i386. Preparing to unpack .../60-libcairo2_1.18.4-1+b1_i386.deb ... Unpacking libcairo2:i386 (1.18.4-1+b1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../61-libdeflate0_1.23-2_i386.deb ... Unpacking libdeflate0:i386 (1.23-2) ... Selecting previously unselected package libfribidi0:i386. Preparing to unpack .../62-libfribidi0_1.0.16-1_i386.deb ... Unpacking libfribidi0:i386 (1.0.16-1) ... Selecting previously unselected package libglib2.0-0t64:i386. Preparing to unpack .../63-libglib2.0-0t64_2.84.1-1_i386.deb ... Unpacking libglib2.0-0t64:i386 (2.84.1-1) ... Selecting previously unselected package libgraphite2-3:i386. Preparing to unpack .../64-libgraphite2-3_1.3.14-2+b1_i386.deb ... Unpacking libgraphite2-3:i386 (1.3.14-2+b1) ... Selecting previously unselected package libharfbuzz0b:i386. Preparing to unpack .../65-libharfbuzz0b_10.2.0-1+b1_i386.deb ... Unpacking libharfbuzz0b:i386 (10.2.0-1+b1) ... Selecting previously unselected package libimagequant0:i386. Preparing to unpack .../66-libimagequant0_2.18.0-1+b2_i386.deb ... Unpacking libimagequant0:i386 (2.18.0-1+b2) ... Selecting previously unselected package libjbig0:i386. Preparing to unpack .../67-libjbig0_2.1-6.1+b2_i386.deb ... Unpacking libjbig0:i386 (2.1-6.1+b2) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../68-libjpeg62-turbo_1%3a2.1.5-3.1_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-3.1) ... Selecting previously unselected package libjson-c5:i386. Preparing to unpack .../69-libjson-c5_0.18+ds-1_i386.deb ... Unpacking libjson-c5:i386 (0.18+ds-1) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../70-liblcms2-2_2.16-2_i386.deb ... Unpacking liblcms2-2:i386 (2.16-2) ... Selecting previously unselected package liblerc4:i386. Preparing to unpack .../71-liblerc4_4.0.0+ds-5_i386.deb ... Unpacking liblerc4:i386 (4.0.0+ds-5) ... Selecting previously unselected package libopenjp2-7:i386. Preparing to unpack .../72-libopenjp2-7_2.5.3-2_i386.deb ... Unpacking libopenjp2-7:i386 (2.5.3-2) ... Selecting previously unselected package libraqm0:i386. Preparing to unpack .../73-libraqm0_0.10.2-1_i386.deb ... Unpacking libraqm0:i386 (0.10.2-1) ... Selecting previously unselected package libsharpyuv0:i386. Preparing to unpack .../74-libsharpyuv0_1.5.0-0.1_i386.deb ... Unpacking libsharpyuv0:i386 (1.5.0-0.1) ... Selecting previously unselected package libwebp7:i386. Preparing to unpack .../75-libwebp7_1.5.0-0.1_i386.deb ... Unpacking libwebp7:i386 (1.5.0-0.1) ... Selecting previously unselected package libtiff6:i386. Preparing to unpack .../76-libtiff6_4.7.0-3_i386.deb ... Unpacking libtiff6:i386 (4.7.0-3) ... Selecting previously unselected package libwebpdemux2:i386. Preparing to unpack .../77-libwebpdemux2_1.5.0-0.1_i386.deb ... Unpacking libwebpdemux2:i386 (1.5.0-0.1) ... Selecting previously unselected package libwebpmux3:i386. Preparing to unpack .../78-libwebpmux3_1.5.0-0.1_i386.deb ... Unpacking libwebpmux3:i386 (1.5.0-0.1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../79-python3-packaging_24.2-3_all.deb ... Unpacking python3-packaging (24.2-3) ... Selecting previously unselected package python3-pyproject-hooks. Preparing to unpack .../80-python3-pyproject-hooks_1.2.0-1_all.deb ... Unpacking python3-pyproject-hooks (1.2.0-1) ... Selecting previously unselected package python3-toml. Preparing to unpack .../81-python3-toml_0.10.2-1_all.deb ... Unpacking python3-toml (0.10.2-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../82-python3-wheel_0.46.1-2_all.deb ... Unpacking python3-wheel (0.46.1-2) ... Selecting previously unselected package python3-build. Preparing to unpack .../83-python3-build_1.2.2-1_all.deb ... Unpacking python3-build (1.2.2-1) ... Selecting previously unselected package python3-installer. Preparing to unpack .../84-python3-installer_0.7.0+dfsg1-3_all.deb ... Unpacking python3-installer (0.7.0+dfsg1-3) ... Selecting previously unselected package pybuild-plugin-pyproject. Preparing to unpack .../85-pybuild-plugin-pyproject_6.20250414_all.deb ... Unpacking pybuild-plugin-pyproject (6.20250414) ... Selecting previously unselected package python3-all. Preparing to unpack .../86-python3-all_3.13.3-1_i386.deb ... Unpacking python3-all (3.13.3-1) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../87-python3-chardet_5.2.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-2) ... Selecting previously unselected package python3-pil:i386. Preparing to unpack .../88-python3-pil_11.1.0-5+b1_i386.deb ... Unpacking python3-pil:i386 (11.1.0-5+b1) ... Selecting previously unselected package python3-cairo. Preparing to unpack .../89-python3-cairo_1.27.0-2_i386.deb ... Unpacking python3-cairo (1.27.0-2) ... Selecting previously unselected package python3-freetype. Preparing to unpack .../90-python3-freetype_2.5.1-1_all.deb ... Unpacking python3-freetype (2.5.1-1) ... Selecting previously unselected package python3-rlpycairo. Preparing to unpack .../91-python3-rlpycairo_0.3.0-3_all.deb ... Unpacking python3-rlpycairo (0.3.0-3) ... Selecting previously unselected package python3-reportlab. Preparing to unpack .../92-python3-reportlab_4.3.1-1_all.deb ... Unpacking python3-reportlab (4.3.1-1) ... Selecting previously unselected package xml-core. Preparing to unpack .../93-xml-core_0.19_all.deb ... Unpacking xml-core (0.19) ... Selecting previously unselected package w3c-sgml-lib. Preparing to unpack .../94-w3c-sgml-lib_1.3-3_all.deb ... Unpacking w3c-sgml-lib (1.3-3) ... Selecting previously unselected package python3-biopython. Preparing to unpack .../95-python3-biopython_1.85+dfsg-4_i386.deb ... Unpacking python3-biopython (1.85+dfsg-4) ... Selecting previously unselected package python3-freesasa. Preparing to unpack .../96-python3-freesasa_2.1.0-3+b5_i386.deb ... Unpacking python3-freesasa (2.1.0-3+b5) ... Selecting previously unselected package python3-poetry-core. Preparing to unpack .../97-python3-poetry-core_2.1.2-2_all.deb ... Unpacking python3-poetry-core (2.1.2-2) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libgraphite2-3:i386 (1.3.14-2+b1) ... Setting up liblcms2-2:i386 (2.16-2) ... Setting up libpixman-1-0:i386 (0.44.0-3) ... Setting up libsharpyuv0:i386 (1.5.0-0.1) ... Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up liblerc4:i386 (4.0.0+ds-5) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libxcb-render0:i386 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libbrotli1:i386 (1.1.0-2+b7) ... Setting up libmagic1t64:i386 (1:5.46-5) ... Setting up x11-common (1:7.7+24) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libdeflate0:i386 (1.23-2) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-7) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up file (1:5.46-5) ... Setting up libjbig0:i386 (2.1-6.1+b2) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up tzdata (2025b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Apr 19 11:06:44 UTC 2025. Universal Time is now: Sat Apr 19 11:06:44 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:i386 (1:1.1.8-1+b2) ... Setting up autotools-dev (20240727.1) ... Setting up libblas3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libjpeg62-turbo:i386 (1:2.1.5-3.1) ... Setting up libx11-data (2:1.8.12-1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:i386 (1.0.16-1) ... Setting up libimagequant0:i386 (2.18.0-1+b2) ... Setting up libunistring5:i386 (1.3-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.47-1.1) ... Setting up python3-numpy-dev:i386 (1:2.2.4+ds-1) ... Setting up autopoint (0.23.1-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libgfortran5:i386 (14.2.0-19) ... Setting up autoconf (2.72-3.1) ... Setting up libwebp7:i386 (1.5.0-0.1) ... Setting up libffi8:i386 (3.4.7-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:i386 (4.7.0-3) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libopenjp2-7:i386 (2.5.3-2) ... Setting up libx11-6:i386 (2:1.8.12-1) ... Setting up netbase (6.5) ... Setting up sgml-base (1.31) ... Setting up libwebpmux3:i386 (1.5.0-0.1) ... Setting up libjson-c5:i386 (0.18+ds-1) ... Setting up readline-common (8.2-6) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up liblapack3:i386 (3.12.1-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.23.1-1) ... Setting up libxrender1:i386 (1:0.9.12-1) ... Setting up libtool (2.5.4-4) ... Setting up fontconfig-config (2.15.0-2.3) ... Setting up libwebpdemux2:i386 (1.5.0-0.1) ... Setting up libxext6:i386 (2:1.3.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libglib2.0-0t64:i386 (2.84.1-1) ... No schema files found: doing nothing. Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libreadline8t64:i386 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up xml-core (0.19) ... Setting up libharfbuzz0b:i386 (10.2.0-1+b1) ... Setting up libfontconfig1:i386 (2.15.0-2.3) ... Setting up libpython3.13-stdlib:i386 (3.13.3-2) ... Setting up libpython3-stdlib:i386 (3.13.3-1) ... Setting up python3.13 (3.13.3-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.3-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.4-1+b1) ... Setting up python3-freesasa (2.1.0-3+b5) ... Setting up python3-packaging (24.2-3) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-poetry-core (2.1.2-2) ... Setting up libraqm0:i386 (0.10.2-1) ... Setting up python3-numpy (1:2.2.4+ds-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up dh-python (6.20250414) ... Setting up python3-cairo (1.27.0-2) ... Setting up python3-all (3.13.3-1) ... Setting up debhelper (13.24.2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-pil:i386 (11.1.0-5+b1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up python3-reportlab (4.3.1-1) ... Setting up python3-build (1.2.2-1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Processing triggers for libc-bin (2.41-7) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.85+dfsg-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/35651/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/35651/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/python-prodigy-2.2.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-prodigy_2.2.5-1_source.changes dpkg-buildpackage: info: source package python-prodigy dpkg-buildpackage: info: source version 2.2.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-prodigy-2.2.5' rm -rf prodigy.egg-info make[1]: Leaving directory '/build/reproducible-path/python-prodigy-2.2.5' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-prodigy-2.2.5/.pybuild/cpython3_3.13_prodigy * Building wheel... Successfully built prodigy_prot-2.2.5-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-prodigy-2.2.5/.pybuild/cpython3_3.13_prodigy/build; python3.13 -m unittest discover -v test_dataset (tests.test_prodigy.ProdigyOutputTest.test_dataset) Test method to compare prediction for 80 dataset cases with ... ok ---------------------------------------------------------------------- Ran 1 test in 28.545s OK Deltas: ba_val max: 1.03% ba_val mean: 0.29% nis_a max: 0.53% nis_a mean: 0.02% nis_c max: 0.44% nis_c mean: 0.02% create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-prodigy/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules execute_before_dh_installman make[1]: Entering directory '/build/reproducible-path/python-prodigy-2.2.5' PYTHONPATH=src help2man debian/python3-prodigy/usr/bin/prodigy --no-info \ --name 'binding affinity predictor' \ --version-string 2.2.5 > prodigy.1 make[1]: Leaving directory '/build/reproducible-path/python-prodigy-2.2.5' dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/python3-prodigy/usr/bin/prodigy dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-prodigy' in '../python3-prodigy_2.2.5-1_all.deb'. dpkg-genbuildinfo --build=binary -O../python-prodigy_2.2.5-1_i386.buildinfo dpkg-genchanges --build=binary -O../python-prodigy_2.2.5-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/35651/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/35651/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/35651 and its subdirectories I: Current time: Sun Apr 20 01:07:59 +14 2025 I: pbuilder-time-stamp: 1745060879 + false + set +x Sat Apr 19 11:07:59 UTC 2025 I: Signing ./b2/python-prodigy_2.2.5-1_i386.buildinfo as python-prodigy_2.2.5-1_i386.buildinfo.asc Sat Apr 19 11:08:00 UTC 2025 I: Signed ./b2/python-prodigy_2.2.5-1_i386.buildinfo as ./b2/python-prodigy_2.2.5-1_i386.buildinfo.asc Sat Apr 19 11:08:00 UTC 2025 - build #2 for python-prodigy/unstable/i386 on ionos12-i386 done. Starting cleanup. All cleanup done. Sat Apr 19 11:08:00 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-GU6QlI6w, removing. /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh: total 72 drwxr-xr-x 2 jenkins jenkins 4096 Apr 19 11:06 b1 drwxr-xr-x 2 jenkins jenkins 4096 Apr 19 11:08 b2 -rw-r--r-- 1 jenkins jenkins 2228 Nov 21 10:27 python-prodigy_2.2.5-1.dsc -rw------- 1 jenkins jenkins 53254 Apr 19 11:06 rbuildlog.5t4ZzTg /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1: total 5692 -rw-r--r-- 1 jenkins jenkins 49594 Apr 19 11:06 build.log -rw-r--r-- 1 jenkins jenkins 1972 Apr 19 11:06 python-prodigy_2.2.5-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2228 Apr 19 11:06 python-prodigy_2.2.5-1.dsc -rw-r--r-- 1 jenkins jenkins 7028 Apr 19 11:06 python-prodigy_2.2.5-1_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 7910 Apr 19 11:06 python-prodigy_2.2.5-1_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1058 Apr 19 11:06 python-prodigy_2.2.5-1_i386.changes -rw-r--r-- 1 jenkins jenkins 1507 Apr 19 11:06 python-prodigy_2.2.5-1_source.changes -rw-r--r-- 1 jenkins jenkins 5709417 Apr 19 11:06 python-prodigy_2.2.5.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 15276 Apr 19 11:06 python3-prodigy_2.2.5-1_all.deb /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2: total 5676 -rw-r--r-- 1 jenkins jenkins 51506 Apr 19 11:08 build.log -rw-r--r-- 1 jenkins jenkins 1972 Apr 19 11:08 python-prodigy_2.2.5-1.debian.tar.xz -rw-r--r-- 1 jenkins jenkins 2228 Apr 19 11:08 python-prodigy_2.2.5-1.dsc -rw-r--r-- 1 jenkins jenkins 7028 Apr 19 11:08 python-prodigy_2.2.5-1_i386.buildinfo -rw-r--r-- 1 jenkins jenkins 7910 Apr 19 11:08 python-prodigy_2.2.5-1_i386.buildinfo.asc -rw-r--r-- 1 jenkins jenkins 1058 Apr 19 11:08 python-prodigy_2.2.5-1_i386.changes -rw-r--r-- 1 jenkins jenkins 1507 Apr 19 11:08 python-prodigy_2.2.5-1_source.changes -rw-r--r-- 1 jenkins jenkins 5709417 Apr 19 11:08 python-prodigy_2.2.5.orig.tar.gz -rw-r--r-- 1 jenkins jenkins 15276 Apr 19 11:08 python3-prodigy_2.2.5-1_all.deb Sat Apr 19 11:08:00 UTC 2025 I: Deleting $TMPDIR on ionos12-i386.debian.net. Sat Apr 19 11:08:01 UTC 2025 I: python-prodigy_2.2.5-1_i386.changes: Format: 1.8 Date: Thu, 21 Nov 2024 04:50:19 -0500 Source: python-prodigy Binary: python3-prodigy Architecture: all Version: 2.2.5-1 Distribution: unstable Urgency: medium Maintainer: Debian Python Team Changed-By: Andrius Merkys Description: python3-prodigy - Protein Binding Affinity Prediction (Python 3) Changes: python-prodigy (2.2.5-1) unstable; urgency=medium . * New upstream version 2.2.5 Checksums-Sha1: a3fc9c4f39df2477569f59a3e0cd992849030ba8 7028 python-prodigy_2.2.5-1_i386.buildinfo 7ea9d93c2eeae3f366432d647896efd06a3017b3 15276 python3-prodigy_2.2.5-1_all.deb Checksums-Sha256: 9d4ab6c6106eba3acc2a9e8d87f35c36970be9c9cf7ebd6a9993e9ca4c0ab71c 7028 python-prodigy_2.2.5-1_i386.buildinfo 4ef837cd19ff51b0f42699f040d1e360d76d330cfc2660e58fc5a233ed1dce0c 15276 python3-prodigy_2.2.5-1_all.deb Files: b5166d99cd6b335b77c1f4d4d3ec9bf8 7028 science optional python-prodigy_2.2.5-1_i386.buildinfo aae01a1f1fe0ca569826443c5aa7f746 15276 science optional python3-prodigy_2.2.5-1_all.deb removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-prodigy_2.2.5-1.rbuild.log' removed '/var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-prodigy_2.2.5-1.rbuild.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/python-prodigy_2.2.5-1.build1.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/logs/unstable/i386/python-prodigy_2.2.5-1.build2.log.gz' removed '/var/lib/jenkins/userContent/reproducible/debian/buildinfo/unstable/i386/python-prodigy_2.2.5-1_i386.buildinfo' removed '/var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/python-prodigy_2.2.5-1.diff.gz' Diff of the two buildlogs: -- --- b1/build.log 2025-04-19 11:06:21.352678438 +0000 +++ b2/build.log 2025-04-19 11:08:00.514571165 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri May 22 05:27:43 -12 2026 -I: pbuilder-time-stamp: 1779470863 +I: Current time: Sun Apr 20 01:06:23 +14 2025 +I: pbuilder-time-stamp: 1745060783 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -23,54 +23,86 @@ dpkg-source: info: unpacking python-prodigy_2.2.5-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3351/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D01_modify_environment starting +debug: Running on ionos12-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 19 11:06 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=23 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='e009d5f6a7c84ff292001dcabdd87aec' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3351' - PS1='# ' - PS2='> ' + INVOCATION_ID=33ab941b78b74e348197bb561e059c51 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=35651 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_p4K4 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1 --logfile b1/build.log python-prodigy_2.2.5-1.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/pbuilderrc_Gmib --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2 --logfile b2/build.log python-prodigy_2.2.5-1.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos16-i386 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-33-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.133-1 (2025-04-10) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3351/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -234,7 +266,7 @@ Get: 110 http://deb.debian.org/debian unstable/main i386 python3-biopython i386 1.85+dfsg-4 [1668 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 python3-freesasa i386 2.1.0-3+b5 [154 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 python3-poetry-core all 2.1.2-2 [229 kB] -Fetched 52.5 MB in 1s (76.3 MB/s) +Fetched 52.5 MB in 2s (29.0 MB/s) Preconfiguring packages ... Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19827 files and directories currently installed.) @@ -613,8 +645,8 @@ Setting up tzdata (2025b-2) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri May 22 17:28:05 UTC 2026. -Universal Time is now: Fri May 22 17:28:05 UTC 2026. +Local time is now: Sat Apr 19 11:06:44 UTC 2025. +Universal Time is now: Sat Apr 19 11:06:44 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:i386 (1:1.1.8-1+b2) ... @@ -715,7 +747,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-prodigy-2.2.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-prodigy_2.2.5-1_source.changes +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-prodigy-2.2.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-prodigy_2.2.5-1_source.changes dpkg-buildpackage: info: source package python-prodigy dpkg-buildpackage: info: source version 2.2.5-1 dpkg-buildpackage: info: source distribution unstable @@ -748,7 +784,7 @@ Test method to compare prediction for 80 dataset cases with ... ok ---------------------------------------------------------------------- -Ran 1 test in 28.146s +Ran 1 test in 28.545s OK Deltas: @@ -793,12 +829,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/35651/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3351 and its subdirectories -I: Current time: Fri May 22 05:29:19 -12 2026 -I: pbuilder-time-stamp: 1779470959 +I: removing directory /srv/workspace/pbuilder/35651 and its subdirectories +I: Current time: Sun Apr 20 01:07:59 +14 2025 +I: pbuilder-time-stamp: 1745060879 Compressing the 2nd log... /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/python-prodigy_2.2.5-1.diff: 66.5% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/logdiffs/unstable/i386/python-prodigy_2.2.5-1.diff.gz b2/build.log: 79.8% -- replaced with stdout Compressing the 1st log... b1/build.log: 80.4% -- replaced with stdout Sat Apr 19 11:08:02 UTC 2025 I: diffoscope 294 will be used to compare the two builds: ++ date -u +%s + DIFFOSCOPE_STAMP=/var/log/reproducible-builds/diffoscope_stamp_python-prodigy_unstable_i386_1745060882 + touch /var/log/reproducible-builds/diffoscope_stamp_python-prodigy_unstable_i386_1745060882 + RESULT=0 + systemd-run '--description=diffoscope on python-prodigy/2.2.5-1 in unstable/i386' --slice=rb-build-diffoscope.slice -u rb-diffoscope-i386_8-66867 '--property=SuccessExitStatus=1 124' --user --send-sighup --pipe --wait -E TMPDIR timeout 155m nice schroot --directory /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh --run-session -c jenkins-reproducible-unstable-diffoscope-2622bdcf-db8a-4b15-a4f5-0f0768c64928 -- sh -c 'export TMPDIR=/srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/dbd-tmp-lA2H7bR ; timeout 150m diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/python-prodigy_2.2.5-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/python-prodigy_2.2.5-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/python-prodigy_2.2.5-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1/python-prodigy_2.2.5-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2/python-prodigy_2.2.5-1_i386.changes' + false + set +x Running as unit: rb-diffoscope-i386_8-66867.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/python-prodigy_2.2.5-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/python-prodigy_2.2.5-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/python-prodigy_2.2.5-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b1/python-prodigy_2.2.5-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.LeND4ghh/b2/python-prodigy_2.2.5-1_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 225ms CPU time consumed: 226ms _ _ _ _ _ __ _ _| |_| |__ ___ _ __ _ __ _ __ ___ __| (_) __ _ _ _ | '_ \| | | | __| '_ \ / _ \| '_ \ _____| '_ \| '__/ _ \ / _` | |/ _` | | | | | |_) | |_| | |_| | | | (_) | | | |_____| |_) | | | (_) | (_| | | (_| | |_| | | .__/ \__, |\__|_| |_|\___/|_| |_| | .__/|_| \___/ \__,_|_|\__, |\__, | |_| |___/ |_| |___/ |___/ Sat Apr 19 11:08:02 UTC 2025 I: diffoscope 294 found no differences in the changes files, and a .buildinfo file also exists. Sat Apr 19 11:08:02 UTC 2025 I: python-prodigy from unstable built successfully and reproducibly on i386. INSERT 0 1 INSERT 0 1 DELETE 1 [2025-04-19 11:08:03] INFO: Starting at 2025-04-19 11:08:03.104844 [2025-04-19 11:08:03] INFO: Generating the pages of 1 package(s) [2025-04-19 11:08:03] CRITICAL: https://tests.reproducible-builds.org/debian/unstable/i386/python-prodigy didn't produce a buildlog, even though it has been built. [2025-04-19 11:08:03] INFO: Finished at 2025-04-19 11:08:03.372373, took: 0:00:00.267536 Sat Apr 19 11:08:03 UTC 2025 - successfully updated the database and updated https://tests.reproducible-builds.org/debian/rb-pkg/unstable/i386/python-prodigy.html Sat Apr 19 11:08:03 UTC 2025 I: Submitting .buildinfo files to external archives: Sat Apr 19 11:08:03 UTC 2025 I: Submitting 8.0K b1/python-prodigy_2.2.5-1_i386.buildinfo.asc https://buildinfo.debian.net/a3fc9c4f39df2477569f59a3e0cd992849030ba8/python-prodigy_2.2.5-1_all Sat Apr 19 11:08:04 UTC 2025 I: Submitting 8.0K b2/python-prodigy_2.2.5-1_i386.buildinfo.asc https://buildinfo.debian.net/7bf11417b5070a2761ce1375ddb9d0feff55ca37/python-prodigy_2.2.5-1_all Sat Apr 19 11:08:05 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Apr 19 11:08:05 UTC 2025 I: Done submitting .buildinfo files. Sat Apr 19 11:08:05 UTC 2025 I: Removing signed python-prodigy_2.2.5-1_i386.buildinfo.asc files: removed './b1/python-prodigy_2.2.5-1_i386.buildinfo.asc' removed './b2/python-prodigy_2.2.5-1_i386.buildinfo.asc' 1745060885 i386 unstable python-prodigy Starting cleanup. /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-prodigy_2.2.5-1.rbuild.log: 77.9% -- replaced with /var/lib/jenkins/userContent/reproducible/debian/rbuild/unstable/i386/python-prodigy_2.2.5-1.rbuild.log.gz [2025-04-19 11:08:05] INFO: Starting at 2025-04-19 11:08:05.324926 [2025-04-19 11:08:05] INFO: Generating the pages of 1 package(s) [2025-04-19 11:08:05] INFO: Finished at 2025-04-19 11:08:05.587078, took: 0:00:00.262158 All cleanup done. Sat Apr 19 11:08:05 UTC 2025 - total duration: 0h 3m 24s. Sat Apr 19 11:08:05 UTC 2025 - reproducible_build.sh stopped running as /tmp/jenkins-script-GcQvldz1, removing. Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 3min 26.992s CPU time consumed: 6.699s