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1 -rw-r--r--···0········0········0········4·2025-03-12·01:30:11.000000·debian-binary1 -rw-r--r--···0········0········0········4·2025-03-12·01:30:11.000000·debian-binary
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1 Package:·gromacs-data1 Package:·gromacs-data
2 Source:·gromacs2 Source:·gromacs
3 Version:·2025.1-13 Version:·2025.1-1
4 Architecture:·all4 Architecture:·all
5 Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org>5 Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org>
6 Installed-Size:·3293296 Installed-Size:·329327
7 Depends:·libjs-mathjax7 Depends:·libjs-mathjax
8 Recommends:·gromacs8 Recommends:·gromacs
9 Section:·science9 Section:·science
10 Priority:·optional10 Priority:·optional
11 Multi-Arch:·foreign11 Multi-Arch:·foreign
12 Homepage:·https://www.gromacs.org/12 Homepage:·https://www.gromacs.org/
13 Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation13 Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation
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74 </div><!--·top·-->74 </div><!--·top·-->
75 <div><div·class="header">75 <div><div·class="header">
76 ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div>76 ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div>
77 </div><!--header-->77 </div><!--header-->
78 <div·class="contents">78 <div·class="contents">
79 <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p>79 <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p>
80 <div·class="dotgraph">80 <div·class="dotgraph">
81 <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3656"·height="1796"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>81 <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3696"·height="1630"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>
82 ·<h1><a·class="anchor"·id="autotoc_md49"></a>82 ·<h1><a·class="anchor"·id="autotoc_md49"></a>
83 Legend</h1>83 Legend</h1>
84 <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p>84 <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p>
85 <div·class="dotgraph">85 <div·class="dotgraph">
86 <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>86 <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>
87 <p>Node·colors:·</p><dl>87 <p>Node·colors:·</p><dl>
88 <dt>gray·background·</dt>88 <dt>gray·background·</dt>
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249 ····['matcher_154',·['matcher',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml#a149880d95897d2e01cc9ed66688a67c7',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}::ManualOutputFile']]],249 ····['matcher_154',·['matcher',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml#a149880d95897d2e01cc9ed66688a67c7',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}::ManualOutputFile']]],
250 ····['matches_155',·['matches',·['../structanonymous__namespace_02sm__keywords_8cpp_03_1_1t__methoddata__kwstr.xhtml#a48e93adae942c05a1cb87c10c8477345',·1,·'anonymous_namespace{sm_keywords.cpp}::t_methoddata_kwstr']]],250 ····['matches_155',·['matches',·['../structanonymous__namespace_02sm__keywords_8cpp_03_1_1t__methoddata__kwstr.xhtml#a48e93adae942c05a1cb87c10c8477345',·1,·'anonymous_namespace{sm_keywords.cpp}::t_methoddata_kwstr']]],
251 ····['matchfullconfiguration_156',·['matchFullConfiguration',·['../classgmx_1_1test_1_1ConfMatch.xhtml#a539cc5f873f38eab1e92c7254eb4fe93',·1,·'gmx::test::ConfMatch']]],251 ····['matchfullconfiguration_156',·['matchFullConfiguration',·['../classgmx_1_1test_1_1ConfMatch.xhtml#a539cc5f873f38eab1e92c7254eb4fe93',·1,·'gmx::test::ConfMatch']]],
252 ····['matchtype_157',·['matchType',·['../structanonymous__namespace_02sm__keywords_8cpp_03_1_1t__methoddata__kwstr.xhtml#ae70c598952362cd86ea5a0ec0cfe9cf2',·1,·'anonymous_namespace{sm_keywords.cpp}::t_methoddata_kwstr']]],252 ····['matchtype_157',·['matchType',·['../structanonymous__namespace_02sm__keywords_8cpp_03_1_1t__methoddata__kwstr.xhtml#ae70c598952362cd86ea5a0ec0cfe9cf2',·1,·'anonymous_namespace{sm_keywords.cpp}::t_methoddata_kwstr']]],
253 ····['math_20library_158',·['The·SIMD·math·library',·['../page_simd.xhtml#autotoc_md70',·1,·'']]],253 ····['math_20library_158',·['The·SIMD·math·library',·['../page_simd.xhtml#autotoc_md70',·1,·'']]],
254 ····['matio_2ecpp_159',·['matio.cpp',·['../tests_2matio_8cpp.xhtml',·1,·'']]],254 ····['matio_2ecpp_159',·['matio.cpp',·['../tests_2matio_8cpp.xhtml',·1,·'']]],
255 ····['matlam_160',·['matlam',·['../classgmx_1_1Lincs.xhtml#a3da2ad9c2aa9800de6a5a83868e90d92',·1,·'gmx::Lincs']]],255 ····['matlam_160',·['matlam',·['../classgmx_1_1Lincs.xhtml#a3da2ad9c2aa9800de6a5a83868e90d92',·1,·'gmx::Lincs']]],
256 ····['matrix_161',·['matrix',·['../structt__matrix.xhtml#a1a09d637a51e9e5b526ae840a182d9ee',·1,·'t_matrix']]],256 ····['matrix_161',·['matrix',·['../structt__matrix.xhtml#a1a09d637a51e9e5b526ae840a182d9ee',·1,·'t_matrix']]],
257 ····['matrix_2ecpp_162',·['matrix.cpp',·['../math_2tests_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)'],257 ····['matrix_2ecpp_162',·['matrix.cpp',·['../math_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)'],
258 ········['../math_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)']258 ········['../math_2tests_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)']
259 ····]],259 ····]],
260 ····['matrix_2eh_163',·['matrix.h',·['../math_2include_2gromacs_2math_2matrix_8h.xhtml',·1,·'']]],260 ····['matrix_2eh_163',·['matrix.h',·['../math_2include_2gromacs_2math_2matrix_8h.xhtml',·1,·'']]],
261 ····['matrix3x3_164',·['matrix3x3',·['../namespacegmx_1_1test.xhtml#abe16d8d44b085b584568a1f5b2e57f2f',·1,·'gmx::test::Matrix3x3'],261 ····['matrix3x3_164',·['matrix3x3',·['../namespacegmx_1_1test.xhtml#abe16d8d44b085b584568a1f5b2e57f2f',·1,·'gmx::test::Matrix3x3'],
262 ········['../namespacegmx.xhtml#a8065c9cfb460c40c3c2699c728ecd3f4',·1,·'gmx::Matrix3x3']262 ········['../namespacegmx.xhtml#a8065c9cfb460c40c3c2699c728ecd3f4',·1,·'gmx::Matrix3x3']
263 ····]],263 ····]],
264 ····['matrix3x3constspan_165',·['Matrix3x3ConstSpan',·['../namespacegmx.xhtml#a589179a4042893247bfe78e630ee381f',·1,·'gmx']]],264 ····['matrix3x3constspan_165',·['Matrix3x3ConstSpan',·['../namespacegmx.xhtml#a589179a4042893247bfe78e630ee381f',·1,·'gmx']]],
265 ····['matrix3x3span_166',·['Matrix3x3Span',·['../namespacegmx.xhtml#a42b7945e249b8dd5a00cd733e679c2a9',·1,·'gmx']]],265 ····['matrix3x3span_166',·['Matrix3x3Span',·['../namespacegmx.xhtml#a42b7945e249b8dd5a00cd733e679c2a9',·1,·'gmx']]],
266 ····['matrix3x3tostring_167',·['Matrix3x3ToString',·['../structgmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03_1_1Matrix3x3ToString.xhtml',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],266 ····['matrix3x3tostring_167',·['Matrix3x3ToString',·['../structgmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03_1_1Matrix3x3ToString.xhtml',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],
267 ····['matrix_5f_168',·['matrix_',·['../structgmx_1_1MrcDensitySkewData.xhtml#a8341d52116450b5e201979b68356df03',·1,·'gmx::MrcDensitySkewData']]],267 ····['matrix_5f_168',·['matrix_',·['../structgmx_1_1MrcDensitySkewData.xhtml#a8341d52116450b5e201979b68356df03',·1,·'gmx::MrcDensitySkewData']]],
268 ····['matrix_5fconvert_169',·['matrix_convert',·['../pbc_8cpp.xhtml#aec6c71950b4b9e1c90429eff68ea4168',·1,·'pbc.cpp']]],268 ····['matrix_5fconvert_169',·['matrix_convert',·['../pbc_8cpp.xhtml#aec6c71950b4b9e1c90429eff68ea4168',·1,·'pbc.cpp']]],
269 ····['matrixvectormultiply_170',·['matrixVectorMultiply',·['../namespacegmx.xhtml#a2f6cbfad1dad185c82ec9bee081833c5',·1,·'gmx']]],269 ····['matrixvectormultiply_170',·['matrixVectorMultiply',·['../namespacegmx.xhtml#a2f6cbfad1dad185c82ec9bee081833c5',·1,·'gmx']]],
270 ····['max_171',·['max',·['../group__module__simd.xhtml#ga3c66081dde9666200461f364725a4085',·1,·'gmx::max()'],270 ····['max_171',·['max',·['../group__module__simd.xhtml#ga4edeef3c458f5c77cf3ceb80532a57ff',·1,·'gmx::max()'],
271 ········['../classgmx_1_1UniformRealDistribution.xhtml#abf888030231e57e8c412cecd63f70f78',·1,·'gmx::UniformRealDistribution::max()'],271 ········['../classgmx_1_1UniformRealDistribution.xhtml#abf888030231e57e8c412cecd63f70f78',·1,·'gmx::UniformRealDistribution::max()'],
272 ········['../classgmx_1_1UniformIntDistribution.xhtml#af3bf0caf1c448e8f298a0d2b60b34733',·1,·'gmx::UniformIntDistribution::max()'],272 ········['../classgmx_1_1UniformIntDistribution.xhtml#af3bf0caf1c448e8f298a0d2b60b34733',·1,·'gmx::UniformIntDistribution::max()'],
273 ········['../classgmx_1_1ThreeFry2x64General.xhtml#a747866a072cff89a20b8f58621ae4bc5',·1,·'gmx::ThreeFry2x64General::max()'],273 ········['../classgmx_1_1ThreeFry2x64General.xhtml#a747866a072cff89a20b8f58621ae4bc5',·1,·'gmx::ThreeFry2x64General::max()'],
274 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#a445e2fab20c2f008fd972f5e96cd8b68',·1,·'gmx::TabulatedNormalDistribution::max()'],274 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#a445e2fab20c2f008fd972f5e96cd8b68',·1,·'gmx::TabulatedNormalDistribution::max()'],
275 ········['../classgmx_1_1NormalDistribution.xhtml#aba294339d0eec4d12a1019d24848f0b9',·1,·'gmx::NormalDistribution::max()'],275 ········['../classgmx_1_1NormalDistribution.xhtml#aba294339d0eec4d12a1019d24848f0b9',·1,·'gmx::NormalDistribution::max()'],
276 ········['../classgmx_1_1GammaDistribution.xhtml#af043df37641bf3c31adc4b46164ef94c',·1,·'gmx::GammaDistribution::max()'],276 ········['../classgmx_1_1GammaDistribution.xhtml#af043df37641bf3c31adc4b46164ef94c',·1,·'gmx::GammaDistribution::max()'],
277 ········['../classgmx_1_1ExponentialDistribution.xhtml#a5db77b73c9d84977cd6a1e93427abb6b',·1,·'gmx::ExponentialDistribution::max()'],277 ········['../classgmx_1_1ExponentialDistribution.xhtml#a5db77b73c9d84977cd6a1e93427abb6b',·1,·'gmx::ExponentialDistribution::max()'],
278 ········['../structgmx_1_1BoundingBox_1_1Corner.xhtml#a41d9f565256e2af79951232a328ce054',·1,·'gmx::BoundingBox::Corner::max()'],278 ········['../structgmx_1_1BoundingBox_1_1Corner.xhtml#a41d9f565256e2af79951232a328ce054',·1,·'gmx::BoundingBox::Corner::max()'],
 279 ········['../group__module__simd.xhtml#ga3c66081dde9666200461f364725a4085',·1,·'gmx::max(Simd4Float·a,·Simd4Float·b)'],
279 ········['../namespacegmx.xhtml#a16f6bf4a20b14262f28168596d5bb8b9',·1,·'gmx::max(double·a,·double·b)'],280 ········['../namespacegmx.xhtml#a16f6bf4a20b14262f28168596d5bb8b9',·1,·'gmx::max(double·a,·double·b)'],
280 ········['../namespacegmx.xhtml#aa8475501c67be44a07c58f4aa43eed23',·1,·'gmx::max(const·gmx::BasicVector&lt;·float·&gt;·&amp;v1,·const·gmx::BasicVector&lt;·float·&gt;·&amp;v2)'],281 ········['../namespacegmx.xhtml#aa8475501c67be44a07c58f4aa43eed23',·1,·'gmx::max(const·gmx::BasicVector&lt;·float·&gt;·&amp;v1,·const·gmx::BasicVector&lt;·float·&gt;·&amp;v2)'],
281 ········['../group__module__simd.xhtml#ga68bbfb58d0ab7d2362d0efde15c14ca3',·1,·'gmx::max(Simd4Double·a,·Simd4Double·b)'],282 ········['../group__module__simd.xhtml#ga68bbfb58d0ab7d2362d0efde15c14ca3',·1,·'gmx::max(Simd4Double·a,·Simd4Double·b)'],
282 ········['../namespacegmx.xhtml#a35c7b010fbd32f5424afa0de0c70db6f',·1,·'gmx::max(float·a,·float·b)'], 
283 ········['../group__module__simd.xhtml#ga4edeef3c458f5c77cf3ceb80532a57ff',·1,·'gmx::max(SimdFloat·a,·SimdFloat·b)'], 
284 ········['../group__module__simd.xhtml#gaceb279f0a831efc0d8e6be7d96c9e6d2',·1,·'gmx::max(SimdDouble·a,·SimdDouble·b)']283 ········['../group__module__simd.xhtml#gaceb279f0a831efc0d8e6be7d96c9e6d2',·1,·'gmx::max(SimdDouble·a,·SimdDouble·b)'],
 284 ········['../namespacegmx.xhtml#a35c7b010fbd32f5424afa0de0c70db6f',·1,·'gmx::max(float·a,·float·b)']
285 ····]],285 ····]],
286 ····['max_5f_172',·['max_',·['../structgmx_1_1MrcDataStatistics.xhtml#a3d4ebb4aee6f51e4383349225d3dee83',·1,·'gmx::MrcDataStatistics']]],286 ····['max_5f_172',·['max_',·['../structgmx_1_1MrcDataStatistics.xhtml#a3d4ebb4aee6f51e4383349225d3dee83',·1,·'gmx::MrcDataStatistics']]],
287 ····['max_5fbeta_173',·['max_beta',·['../structgmx__enfrotgrp.xhtml#ac3907c78cd20eccc0e427c288bec058d',·1,·'gmx_enfrotgrp']]],287 ····['max_5fbeta_173',·['max_beta',·['../structgmx__enfrotgrp.xhtml#ac3907c78cd20eccc0e427c288bec058d',·1,·'gmx_enfrotgrp']]],
288 ····['max_5fconnect_174',·['max_connect',·['../classgmx_1_1Lincs.xhtml#a7c26cd85abd23d06de22e27ee68af042',·1,·'gmx::Lincs']]],288 ····['max_5fconnect_174',·['max_connect',·['../classgmx_1_1Lincs.xhtml#a7c26cd85abd23d06de22e27ee68af042',·1,·'gmx::Lincs']]],
289 ····['max_5fcutoff2_175',·['max_cutoff2',·['../pbc_8cpp.xhtml#aa14c05a2e7b891ca9ce15895e75ff6db',·1,·'max_cutoff2():&#160;pbc.cpp'],289 ····['max_5fcutoff2_175',·['max_cutoff2',·['../pbc_8cpp.xhtml#aa14c05a2e7b891ca9ce15895e75ff6db',·1,·'max_cutoff2():&#160;pbc.cpp'],
290 ········['../structt__pbc.xhtml#a0648f104170187ab2a5656e7c16323d6',·1,·'t_pbc::max_cutoff2']290 ········['../structt__pbc.xhtml#a0648f104170187ab2a5656e7c16323d6',·1,·'t_pbc::max_cutoff2']
291 ····]],291 ····]],
Offset 693, 18 lines modifiedOffset 693, 18 lines modified
693 ········['../page_analysisdata.xhtml#autotoc_md77',·1,·'Provided·data·processing·modules'],693 ········['../page_analysisdata.xhtml#autotoc_md77',·1,·'Provided·data·processing·modules'],
694 ········['../group__group__utilitymodules.xhtml',·1,·'Utility·Modules']694 ········['../group__group__utilitymodules.xhtml',·1,·'Utility·Modules']
695 ····]],695 ····]],
696 ····['modules_20during_20setup_20and_20simulation_425',·['Callbacks·to·modules·during·setup·and·simulation',·['../page_mdmodules.xhtml#autotoc_md6',·1,·'']]],696 ····['modules_20during_20setup_20and_20simulation_425',·['Callbacks·to·modules·during·setup·and·simulation',·['../page_mdmodules.xhtml#autotoc_md6',·1,·'']]],
697 ····['modules_20for_20simulation_20functionality_426',·['Modules·for·simulation·functionality',·['../group__group__mdrun.xhtml',·1,·'']]],697 ····['modules_20for_20simulation_20functionality_426',·['Modules·for·simulation·functionality',·['../group__group__mdrun.xhtml',·1,·'']]],
698 ····['modules_2ecpp_427',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]],698 ····['modules_2ecpp_427',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]],
699 ····['modules_2eh_428',·['modules.h',·['../modules_8h.xhtml',·1,·'']]],699 ····['modules_2eh_428',·['modules.h',·['../modules_8h.xhtml',·1,·'']]],
 700 ····['modules_5f_429',·['modules_',·['../classgmx_1_1AbstractAnalysisData_1_1Impl.xhtml#a6aacb7133a2ff045a1f39daebe161b0b',·1,·'gmx::AbstractAnalysisData::Impl::modules_'],
700 ····['modules_5f_429',·['modules_',·['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#afd03786124306a1bdfce2c71cf28951b',·1,·'gmx::AnalysisDataModuleManager::Impl::modules_'],701 ········['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#afd03786124306a1bdfce2c71cf28951b',·1,·'gmx::AnalysisDataModuleManager::Impl::modules_'],
701 ········['../classgmx_1_1CommandLineModuleManager_1_1Impl.xhtml#ac010184f1903b09009d59fb48ec2931c',·1,·'gmx::CommandLineModuleManager::Impl::modules_'],702 ········['../classgmx_1_1CommandLineModuleManager_1_1Impl.xhtml#ac010184f1903b09009d59fb48ec2931c',·1,·'gmx::CommandLineModuleManager::Impl::modules_'],
702 ········['../classgmx_1_1internal_1_1AnalysisDataStorageImpl.xhtml#abc3ca7c53a4ebc8e5f737d948413342c',·1,·'gmx::internal::AnalysisDataStorageImpl::modules_'],703 ········['../classgmx_1_1internal_1_1AnalysisDataStorageImpl.xhtml#abc3ca7c53a4ebc8e5f737d948413342c',·1,·'gmx::internal::AnalysisDataStorageImpl::modules_']
703 ········['../classgmx_1_1AbstractAnalysisData_1_1Impl.xhtml#a6aacb7133a2ff045a1f39daebe161b0b',·1,·'gmx::AbstractAnalysisData::Impl::modules_'] 
704 ····]],704 ····]],
705 ····['moduleselection_430',·['ModuleSelection',·['../classgmx_1_1test_1_1ModuleSelection.xhtml',·1,·'gmx::test']]],705 ····['moduleselection_430',·['ModuleSelection',·['../classgmx_1_1test_1_1ModuleSelection.xhtml',·1,·'gmx::test']]],
706 ····['moduletest_431',·['ModuleTest',·['../classgmx_1_1test_1_1ModuleTest.xhtml',·1,·'gmx::test']]],706 ····['moduletest_431',·['ModuleTest',·['../classgmx_1_1test_1_1ModuleTest.xhtml',·1,·'gmx::test']]],
707 ····['moduletest_2ecpp_432',·['moduletest.cpp',·['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'],707 ····['moduletest_2ecpp_432',·['moduletest.cpp',·['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'],
708 ········['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)']708 ········['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)']
709 ····]],709 ····]],
710 ····['moduletest_2eh_433',·['moduletest.h',·['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'],710 ····['moduletest_2eh_433',·['moduletest.h',·['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'],
Offset 723, 23 lines modifiedOffset 723, 23 lines modified
723 ····]],723 ····]],
724 ····['moleculeindexstart_443',·['moleculeIndexStart',·['../structMoleculeBlockIndices.xhtml#a063577a901e606ad2b1834d076230979',·1,·'MoleculeBlockIndices']]],724 ····['moleculeindexstart_443',·['moleculeIndexStart',·['../structMoleculeBlockIndices.xhtml#a063577a901e606ad2b1834d076230979',·1,·'MoleculeBlockIndices']]],
725 ····['moleculeinformation_444',·['MoleculeInformation',·['../structMoleculeInformation.xhtml',·1,·'']]],725 ····['moleculeinformation_444',·['MoleculeInformation',·['../structMoleculeInformation.xhtml',·1,·'']]],
726 ····['moleculepatch_445',·['MoleculePatch',·['../structMoleculePatch.xhtml',·1,·'']]],726 ····['moleculepatch_445',·['MoleculePatch',·['../structMoleculePatch.xhtml',·1,·'']]],
727 ····['moleculepatchdatabase_446',·['MoleculePatchDatabase',·['../structMoleculePatchDatabase.xhtml',·1,·'']]],727 ····['moleculepatchdatabase_446',·['MoleculePatchDatabase',·['../structMoleculePatchDatabase.xhtml',·1,·'']]],
728 ····['moleculepatchtype_447',·['MoleculePatchType',·['../hackblock_8h.xhtml#ab96ef77f5bc6d24fdd272b55f5206016',·1,·'hackblock.h']]],728 ····['moleculepatchtype_447',·['MoleculePatchType',·['../hackblock_8h.xhtml#ab96ef77f5bc6d24fdd272b55f5206016',·1,·'hackblock.h']]],
729 ····['moleculesarewhole_448',·['MoleculesAreWhole',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9af6ea0d2701a81eb19f537c7c982b2fd8',·1,·'gmx']]],729 ····['moleculesarewhole_448',·['MoleculesAreWhole',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9af6ea0d2701a81eb19f537c7c982b2fd8',·1,·'gmx']]],
730 ····['moleculetype_449',·['moleculetype',·['../structMolecularTopologyAtomIndices.xhtml#ac033337827f14c4585e4b1ae9eb272e3',·1,·'MolecularTopologyAtomIndices::moleculeType'], 
731 ········['../structMoleculeType.xhtml',·1,·'MoleculeType'],730 ····['moleculetype_449',·['moleculetype',·['../structMoleculeType.xhtml',·1,·'MoleculeType'],
732 ········['../structAtomInMolblock.xhtml#adbd0c382ef27b472f0ad350a0142c809',·1,·'AtomInMolblock::moleculeType'],731 ········['../structAtomInMolblock.xhtml#adbd0c382ef27b472f0ad350a0142c809',·1,·'AtomInMolblock::moleculeType'],
733 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02mshift_8cpp_03.xhtml#ae9b5b921bcb8dd2b97cc0d6a14741216',·1,·'gmx::test::anonymous_namespace{mshift.cpp}::moleculeType()'],732 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02mshift_8cpp_03.xhtml#ae9b5b921bcb8dd2b97cc0d6a14741216',·1,·'gmx::test::anonymous_namespace{mshift.cpp}::moleculeType()'],
 733 ········['../structMolecularTopologyAtomIndices.xhtml#ac033337827f14c4585e4b1ae9eb272e3',·1,·'MolecularTopologyAtomIndices::moleculeType'],
734 ········['../classAtomProxy.xhtml#a82511a69b9b329f73b3ecaa77c7e5df0',·1,·'AtomProxy::moleculeType()']734 ········['../classAtomProxy.xhtml#a82511a69b9b329f73b3ecaa77c7e5df0',·1,·'AtomProxy::moleculeType()']
735 ····]],735 ····]],
736 ····['molname_450',·['molname',·['../structswap__group.xhtml#a1133a26ad7fa6ffc6614b1a50127f47d',·1,·'swap_group']]],736 ····['molname_450',·['molname',·['../structswap__group.xhtml#a1133a26ad7fa6ffc6614b1a50127f47d',·1,·'swap_group']]],
737 ····['mols_451',·['mols',·['../structMoleculeInformation.xhtml#a945c507ad8f991d11901cb3fcce96487',·1,·'MoleculeInformation::mols'], 
738 ········['../classgmx_1_1ImdSession_1_1Impl.xhtml#ab3aac1e190ed353a1e717fa5fa60b61a',·1,·'gmx::ImdSession::Impl::mols']737 ····['mols_451',·['mols',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#ab3aac1e190ed353a1e717fa5fa60b61a',·1,·'gmx::ImdSession::Impl::mols'],
 738 ········['../structMoleculeInformation.xhtml#a945c507ad8f991d11901cb3fcce96487',·1,·'MoleculeInformation::mols']
739 ····]],739 ····]],
740 ····['moltypehasvsite_452',·['moltypeHasVsite',·['../computemultibodycutoffs_8cpp.xhtml#a7759c5f444a2540620bd7aed6b99577a',·1,·'computemultibodycutoffs.cpp']]],740 ····['moltypehasvsite_452',·['moltypeHasVsite',·['../computemultibodycutoffs_8cpp.xhtml#a7759c5f444a2540620bd7aed6b99577a',·1,·'computemultibodycutoffs.cpp']]],
741 ····['momentum_453',·['momentum',·['../structSystemMomentum.xhtml#a12a78f8e5157ad1e319366a2e4bebc1c',·1,·'SystemMomentum']]],741 ····['momentum_453',·['momentum',·['../structSystemMomentum.xhtml#a12a78f8e5157ad1e319366a2e4bebc1c',·1,·'SystemMomentum']]],
742 ····['momentumfullstep_454',·['momentumFullStep',·['../structSystemMomenta.xhtml#ab8b254f7b2e18c4c7377bf444edad356',·1,·'SystemMomenta']]],742 ····['momentumfullstep_454',·['momentumFullStep',·['../structSystemMomenta.xhtml#ab8b254f7b2e18c4c7377bf444edad356',·1,·'SystemMomenta']]],
743 ····['momentumhalfstep_455',·['momentumHalfStep',·['../structSystemMomenta.xhtml#aa8d185ac5f2bc0357cb2065c31ebaa25',·1,·'SystemMomenta']]],743 ····['momentumhalfstep_455',·['momentumHalfStep',·['../structSystemMomenta.xhtml#aa8d185ac5f2bc0357cb2065c31ebaa25',·1,·'SystemMomenta']]],
744 ····['momentumoldhalfstep_456',·['momentumOldHalfStep',·['../structSystemMomenta.xhtml#af9444ab09b89450b547c049d37cf052e',·1,·'SystemMomenta']]],744 ····['momentumoldhalfstep_456',·['momentumOldHalfStep',·['../structSystemMomenta.xhtml#af9444ab09b89450b547c049d37cf052e',·1,·'SystemMomenta']]],
745 ····['mon_457',·['mon',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edvecs.xhtml#a09f4fe90ebb817228b3fb0824e790530',·1,·'anonymous_namespace{edsam.cpp}::t_edvecs']]],745 ····['mon_457',·['mon',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edvecs.xhtml#a09f4fe90ebb817228b3fb0824e790530',·1,·'anonymous_namespace{edsam.cpp}::t_edvecs']]],
Offset 756, 16 lines modifiedOffset 756, 16 lines modified
756 ····['mpi_5fcomm_5ffree_5fwrapper_468',·['MPI_Comm_free_wrapper',·['../namespacegmx.xhtml#a44ea2e7aec0766e4cecc81fabd0db6a8',·1,·'gmx']]],756 ····['mpi_5fcomm_5ffree_5fwrapper_468',·['MPI_Comm_free_wrapper',·['../namespacegmx.xhtml#a44ea2e7aec0766e4cecc81fabd0db6a8',·1,·'gmx']]],
757 ····['mpi_5fcomm_5fmysim_469',·['mpi_comm_mysim',·['../structgmx__pme__pp.xhtml#a25a404407e196ee20bfe0fff545327c2',·1,·'gmx_pme_pp']]],757 ····['mpi_5fcomm_5fmysim_469',·['mpi_comm_mysim',·['../structgmx__pme__pp.xhtml#a25a404407e196ee20bfe0fff545327c2',·1,·'gmx_pme_pp']]],
758 ····['mpi_5fcomm_5fptr_470',·['MPI_Comm_ptr',·['../namespacegmx.xhtml#a7f2b2a3e5c24c380d09df790929a6778',·1,·'gmx']]],758 ····['mpi_5fcomm_5fptr_470',·['MPI_Comm_ptr',·['../namespacegmx.xhtml#a7f2b2a3e5c24c380d09df790929a6778',·1,·'gmx']]],
759 ····['mpi_5finbuf_471',·['mpi_inbuf',·['../structgmx__enfrot.xhtml#a51ac87bda1dd92174d5550313085bf96',·1,·'gmx_enfrot']]],759 ····['mpi_5finbuf_471',·['mpi_inbuf',·['../structgmx__enfrot.xhtml#a51ac87bda1dd92174d5550313085bf96',·1,·'gmx_enfrot']]],
760 ····['mpi_5foutbuf_472',·['mpi_outbuf',·['../structgmx__enfrot.xhtml#a1719c7ac65fbc7ecaf99bdab41d850c3',·1,·'gmx_enfrot']]],760 ····['mpi_5foutbuf_472',·['mpi_outbuf',·['../structgmx__enfrot.xhtml#a1719c7ac65fbc7ecaf99bdab41d850c3',·1,·'gmx_enfrot']]],
761 ····['mpi_5fprinter_2eh_473',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]],761 ····['mpi_5fprinter_2eh_473',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]],
762 ····['mpicomm_474',·['mpiComm',·['../structPmeShared.xhtml#a3dfb81f0a49fa2fd466c195ce87302ad',·1,·'PmeShared']]],762 ····['mpicomm_474',·['mpiComm',·['../structPmeShared.xhtml#a3dfb81f0a49fa2fd466c195ce87302ad',·1,·'PmeShared']]],
763 ····['mpicommall_475',·['mpicommall',·['../classgmx_1_1DomainCommForward.xhtml#acca96094d4f43e2ae83ec208f1b99e88',·1,·'gmx::DomainCommForward::mpiCommAll()'], 
764 ········['../classgmx_1_1DomainCommBackward.xhtml#ac550edb7920c56ccd8caf801c68cb054',·1,·'gmx::DomainCommBackward::mpiCommAll()']763 ····['mpicommall_475',·['mpicommall',·['../classgmx_1_1DomainCommBackward.xhtml#ac550edb7920c56ccd8caf801c68cb054',·1,·'gmx::DomainCommBackward::mpiCommAll()'],
 764 ········['../classgmx_1_1DomainCommForward.xhtml#acca96094d4f43e2ae83ec208f1b99e88',·1,·'gmx::DomainCommForward::mpiCommAll()']
765 ····]],765 ····]],
766 ····['mpicommx_476',·['mpiCommX',·['../structPmeShared.xhtml#a4a18c130ef148fbaca140a4a47411227',·1,·'PmeShared']]],766 ····['mpicommx_476',·['mpiCommX',·['../structPmeShared.xhtml#a4a18c130ef148fbaca140a4a47411227',·1,·'PmeShared']]],
767 ····['mpicommy_477',·['mpiCommY',·['../structPmeShared.xhtml#ad622e2d0e19fc94d173231cd03e72afe',·1,·'PmeShared']]],767 ····['mpicommy_477',·['mpiCommY',·['../structPmeShared.xhtml#ad622e2d0e19fc94d173231cd03e72afe',·1,·'PmeShared']]],
768 ····['mpilibraryversionstring_478',·['mpiLibraryVersionString',·['../namespacegmx.xhtml#a49c75db6d97651626c88f9f23f4bffaa',·1,·'gmx']]],768 ····['mpilibraryversionstring_478',·['mpiLibraryVersionString',·['../namespacegmx.xhtml#a49c75db6d97651626c88f9f23f4bffaa',·1,·'gmx']]],
769 ····['mpisetupvalid_479',·['mpiSetupValid',·['../classgmx_1_1test_1_1MultiSimTest.xhtml#aed91522d2a8bd6ddc44d716a07ed6a07',·1,·'gmx::test::MultiSimTest']]],769 ····['mpisetupvalid_479',·['mpiSetupValid',·['../classgmx_1_1test_1_1MultiSimTest.xhtml#aed91522d2a8bd6ddc44d716a07ed6a07',·1,·'gmx::test::MultiSimTest']]],
770 ····['mpitest_2ecpp_480',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'],770 ····['mpitest_2ecpp_480',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'],
771 ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)']771 ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)']
Offset 775, 16 lines modifiedOffset 775, 16 lines modified
775 ····['mrcdatamode_483',·['MrcDataMode',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966',·1,·'gmx']]],775 ····['mrcdatamode_483',·['MrcDataMode',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966',·1,·'gmx']]],
776 ····['mrcdatastatistics_484',·['MrcDataStatistics',·['../structgmx_1_1MrcDataStatistics.xhtml',·1,·'gmx']]],776 ····['mrcdatastatistics_484',·['MrcDataStatistics',·['../structgmx_1_1MrcDataStatistics.xhtml',·1,·'gmx']]],
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Offset 421, 16 lines modifiedOffset 421, 16 lines modified
421 ····['nnodesx_281',·['nnodesX',·['../structPmeShared.xhtml#a8452479239784ced7afff1e051830952',·1,·'PmeShared']]],421 ····['nnodesx_281',·['nnodesX',·['../structPmeShared.xhtml#a8452479239784ced7afff1e051830952',·1,·'PmeShared']]],
422 ····['nnodesy_282',·['nnodesY',·['../structPmeShared.xhtml#a37add1a0f09eb17756daf2c246a87cb8',·1,·'PmeShared']]],422 ····['nnodesy_282',·['nnodesY',·['../structPmeShared.xhtml#a37add1a0f09eb17756daf2c246a87cb8',·1,·'PmeShared']]],
423 ····['nnpot_2ecpp_283',·['nnpot.cpp',·['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],423 ····['nnpot_2ecpp_283',·['nnpot.cpp',·['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],
424 ········['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']424 ········['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']
425 ····]],425 ····]],
426 ····['nnpot_2eh_284',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],426 ····['nnpot_2eh_284',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],
427 ····['nnpotforceprovider_285',·['NNPotForceProvider',·['../classgmx_1_1NNPotForceProvider.xhtml',·1,·'gmx']]],427 ····['nnpotforceprovider_285',·['NNPotForceProvider',·['../classgmx_1_1NNPotForceProvider.xhtml',·1,·'gmx']]],
428 ····['nnpotforceprovider_2ecpp_286',·['nnpotforceprovider.cpp',·['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],428 ····['nnpotforceprovider_2ecpp_286',·['nnpotforceprovider.cpp',·['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
429 ········['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']429 ········['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
430 ····]],430 ····]],
431 ····['nnpotforceprovider_2eh_287',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],431 ····['nnpotforceprovider_2eh_287',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],
432 ····['nnpotforceprovider_5fstub_2ecpp_288',·['nnpotforceprovider_stub.cpp',·['../nnpotforceprovider__stub_8cpp.xhtml',·1,·'']]],432 ····['nnpotforceprovider_5fstub_2ecpp_288',·['nnpotforceprovider_stub.cpp',·['../nnpotforceprovider__stub_8cpp.xhtml',·1,·'']]],
433 ····['nnpotmdmodule_289',·['NNPotMDModule',·['../classgmx_1_1anonymous__namespace_02nnpot_8cpp_03_1_1NNPotMDModule.xhtml',·1,·'gmx::anonymous_namespace{nnpot.cpp}']]],433 ····['nnpotmdmodule_289',·['NNPotMDModule',·['../classgmx_1_1anonymous__namespace_02nnpot_8cpp_03_1_1NNPotMDModule.xhtml',·1,·'gmx::anonymous_namespace{nnpot.cpp}']]],
434 ····['nnpotmdptransformfromstring_290',·['NNPotMdpTransformFromString',·['../namespacegmx.xhtml#a965719fa61deaf0dcfcf8903463e243d',·1,·'gmx']]],434 ····['nnpotmdptransformfromstring_290',·['NNPotMdpTransformFromString',·['../namespacegmx.xhtml#a965719fa61deaf0dcfcf8903463e243d',·1,·'gmx']]],
435 ····['nnpotmodel_2eh_291',·['nnpotmodel.h',·['../nnpotmodel_8h.xhtml',·1,·'']]],435 ····['nnpotmodel_2eh_291',·['nnpotmodel.h',·['../nnpotmodel_8h.xhtml',·1,·'']]],
436 ····['nnpotmoduleinfo_292',·['NNPotModuleInfo',·['../structgmx_1_1NNPotModuleInfo.xhtml',·1,·'gmx']]],436 ····['nnpotmoduleinfo_292',·['NNPotModuleInfo',·['../structgmx_1_1NNPotModuleInfo.xhtml',·1,·'gmx']]],
Offset 438, 32 lines modifiedOffset 438, 32 lines modified
438 ········['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']438 ········['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
439 ····]],439 ····]],
440 ····['nnpotoptions_2eh_294',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],440 ····['nnpotoptions_2eh_294',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],
441 ····['nnpotparameters_295',·['NNPotParameters',·['../structgmx_1_1NNPotParameters.xhtml',·1,·'gmx']]],441 ····['nnpotparameters_295',·['NNPotParameters',·['../structgmx_1_1NNPotParameters.xhtml',·1,·'gmx']]],
442 ····['nnpottopologypreprocessor_296',·['nnpottopologypreprocessor',·['../classgmx_1_1NNPotTopologyPreprocessor.xhtml#afb131c39ea21535f2f145444d8dbfc5e',·1,·'gmx::NNPotTopologyPreprocessor::NNPotTopologyPreprocessor()'],442 ····['nnpottopologypreprocessor_296',·['nnpottopologypreprocessor',·['../classgmx_1_1NNPotTopologyPreprocessor.xhtml#afb131c39ea21535f2f145444d8dbfc5e',·1,·'gmx::NNPotTopologyPreprocessor::NNPotTopologyPreprocessor()'],
443 ········['../classgmx_1_1NNPotTopologyPreprocessor.xhtml',·1,·'gmx::NNPotTopologyPreprocessor']443 ········['../classgmx_1_1NNPotTopologyPreprocessor.xhtml',·1,·'gmx::NNPotTopologyPreprocessor']
444 ····]],444 ····]],
445 ····['nnpottopologypreprocessor_2ecpp_297',·['nnpottopologypreprocessor.cpp',·['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],445 ····['nnpottopologypreprocessor_2ecpp_297',·['nnpottopologypreprocessor.cpp',·['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
446 ········['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']446 ········['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
447 ····]],447 ····]],
448 ····['nnpottopologypreprocessor_2eh_298',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],448 ····['nnpottopologypreprocessor_2eh_298',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],
449 ····['nnpottopologypreprocessortest_299',·['NNPotTopologyPreprocessorTest',·['../classgmx_1_1test_1_1NNPotTopologyPreprocessorTest.xhtml',·1,·'gmx::test']]],449 ····['nnpottopologypreprocessortest_299',·['NNPotTopologyPreprocessorTest',·['../classgmx_1_1test_1_1NNPotTopologyPreprocessorTest.xhtml',·1,·'gmx::test']]],
450 ····['nnstl_300',·['NNSTL',·['../pairlist__tuning_8cpp.xhtml#aa7bb25f96f0e989b4b7c45d407a1b63c',·1,·'pairlist_tuning.cpp']]],450 ····['nnstl_300',·['NNSTL',·['../pairlist__tuning_8cpp.xhtml#aa7bb25f96f0e989b4b7c45d407a1b63c',·1,·'pairlist_tuning.cpp']]],
451 ····['no_301',·['no',·['../md__enums_8h.xhtml#a07be3f2d86a9b6337ff8c4853a0fb8b8abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],451 ····['no_301',·['no',·['../md__enums_8h.xhtml#a07be3f2d86a9b6337ff8c4853a0fb8b8abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
452 ········['../classgmx_1_1BiasParams.xhtml#a6e4efe51c269090a20241639f64bcb03a7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::BiasParams::no'], 
453 ········['../dlbtiming_8h.xhtml#a4c394e83d3a1d89ac14e90553e54dff4a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'], 
454 ········['../dlbtiming_8h.xhtml#a187697058dfa34f355e4ee2e8fcf1dc1a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'], 
455 ········['../namespacegmx.xhtml#af2ca01657023e02580baaaf0c011a60ca7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::no'], 
456 ········['../namespacegmx.xhtml#a65a4da1c9de2e9bed752f8b8a3f9f536abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
457 ········['../group__module__modularsimulator.xhtml#gga5c5a9708579f420d64688aaea88c2885abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
458 ········['../namespacegmx.xhtml#ab1684f724061fbe3bfdd1efde3e715e7abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
459 ········['../namespacegmx.xhtml#abb4f062823c006fc233c4b4bcb0119ecabafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
460 ········['../md__enums_8h.xhtml#ab1fce6aba35ca024e1ac818bdf1d5d15abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'], 
461 ········['../md__enums_8h.xhtml#a4434e158af47f6a5cbc228465ade1511abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'], 
462 ········['../md__enums_8h.xhtml#a7f23540ff5222f8735be151f3cbd1b2fabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],452 ········['../md__enums_8h.xhtml#a7f23540ff5222f8735be151f3cbd1b2fabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
 453 ········['../md__enums_8h.xhtml#a4434e158af47f6a5cbc228465ade1511abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
 454 ········['../md__enums_8h.xhtml#ab1fce6aba35ca024e1ac818bdf1d5d15abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
 455 ········['../namespacegmx.xhtml#abb4f062823c006fc233c4b4bcb0119ecabafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 456 ········['../namespacegmx.xhtml#ab1684f724061fbe3bfdd1efde3e715e7abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 457 ········['../group__module__modularsimulator.xhtml#gga5c5a9708579f420d64688aaea88c2885abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 458 ········['../namespacegmx.xhtml#a65a4da1c9de2e9bed752f8b8a3f9f536abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 459 ········['../namespacegmx.xhtml#af2ca01657023e02580baaaf0c011a60ca7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::no'],
 460 ········['../dlbtiming_8h.xhtml#a187697058dfa34f355e4ee2e8fcf1dc1a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'],
 461 ········['../dlbtiming_8h.xhtml#a4c394e83d3a1d89ac14e90553e54dff4a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'],
 462 ········['../classgmx_1_1BiasParams.xhtml#a6e4efe51c269090a20241639f64bcb03a7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::BiasParams::no'],
463 ········['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],463 ········['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
464 ········['../classgmx_1_1Bias.xhtml#aa82610508a501aa57b8b5be5054920f2abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::Bias::No']464 ········['../classgmx_1_1Bias.xhtml#aa82610508a501aa57b8b5be5054920f2abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::Bias::No']
465 ····]],465 ····]],
466 ····['no_5fdelete_302',·['no_delete',·['../structgmx_1_1no__delete.xhtml',·1,·'gmx']]],466 ····['no_5fdelete_302',·['no_delete',·['../structgmx_1_1no__delete.xhtml',·1,·'gmx']]],
467 ····['no_5fvalue_303',·['NO_VALUE',·['../selvalue_8h.xhtml#a70b42b87d434580bf1493591857b8beca4d694119ce83b62d74ff06b5e017dca8',·1,·'selvalue.h']]],467 ····['no_5fvalue_303',·['NO_VALUE',·['../selvalue_8h.xhtml#a70b42b87d434580bf1493591857b8beca4d694119ce83b62d74ff06b5e017dca8',·1,·'selvalue.h']]],
468 ····['noappending_304',·['NoAppending',·['../namespacegmx.xhtml#afd6f3326407d61e4364f4bfeeebe5f03a95924eff082d0bc6529c77794edce7c8',·1,·'gmx']]],468 ····['noappending_304',·['NoAppending',·['../namespacegmx.xhtml#afd6f3326407d61e4364f4bfeeebe5f03a95924eff082d0bc6529c77794edce7c8',·1,·'gmx']]],
469 ····['nocallparameter_305',·['NoCallParameter',·['../classgmx_1_1BuildMDModulesNotifier_3_4_1_1NoCallParameter.xhtml',·1,·'gmx::BuildMDModulesNotifier&lt;&gt;']]],469 ····['nocallparameter_305',·['NoCallParameter',·['../classgmx_1_1BuildMDModulesNotifier_3_4_1_1NoCallParameter.xhtml',·1,·'gmx::BuildMDModulesNotifier&lt;&gt;']]],
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Offset 26, 20 lines modifiedOffset 26, 20 lines modified
26 ····['paddedconstarrayref_16',·['paddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a3b87c53ddcde85eccd59b62fafc2fec3',·1,·'gmx::ArrayRefWithPadding']]],26 ····['paddedconstarrayref_16',·['paddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a3b87c53ddcde85eccd59b62fafc2fec3',·1,·'gmx::ArrayRefWithPadding']]],
27 ····['paddedhostvector_17',·['paddedhostvector',·['../namespacegmx.xhtml#a5ec47a61b30ffcc249cc27ae5ea47da8',·1,·'gmx::PaddedHostVector'],27 ····['paddedhostvector_17',·['paddedhostvector',·['../namespacegmx.xhtml#a5ec47a61b30ffcc249cc27ae5ea47da8',·1,·'gmx::PaddedHostVector'],
28 ········['../state_8h.xhtml#ac8c51716c19f5f58463e856c19b39acb',·1,·'PaddedHostVector:&#160;state.h']28 ········['../state_8h.xhtml#ac8c51716c19f5f58463e856c19b39acb',·1,·'PaddedHostVector:&#160;state.h']
29 ····]],29 ····]],
30 ····['paddednumatomsincolumn_18',·['paddedNumAtomsInColumn',·['../classgmx_1_1Grid.xhtml#a637b80833171b976e901a62e23fb80a2',·1,·'gmx::Grid']]],30 ····['paddednumatomsincolumn_18',·['paddedNumAtomsInColumn',·['../classgmx_1_1Grid.xhtml#a637b80833171b976e901a62e23fb80a2',·1,·'gmx::Grid']]],
31 ····['paddedsize_19',·['paddedSize',·['../classgmx_1_1PaddedVector.xhtml#aa3d1b552af6106d1bb61426b4605add3',·1,·'gmx::PaddedVector']]],31 ····['paddedsize_19',·['paddedSize',·['../classgmx_1_1PaddedVector.xhtml#aa3d1b552af6106d1bb61426b4605add3',·1,·'gmx::PaddedVector']]],
32 ····['paddedvector_20',·['paddedvector',·['../classgmx_1_1PaddedVector.xhtml#ac090f26229cc0e5ca4cf4f70d500dd9e',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·value_type·const·&amp;v,·const·allocator_type·&amp;allocator=Allocator())'],32 ····['paddedvector_20',·['paddedvector',·['../classgmx_1_1PaddedVector.xhtml#ac090f26229cc0e5ca4cf4f70d500dd9e',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·value_type·const·&amp;v,·const·allocator_type·&amp;allocator=Allocator())'],
33 ········['../classgmx_1_1PaddedVector.xhtml#a8a5f5975b2207677f1e956060b02c1d2',·1,·'gmx::PaddedVector::PaddedVector(allocator_type·const·&amp;allocator)'], 
34 ········['../classgmx_1_1PaddedVector.xhtml#aae517037a7e2a04806a72deffe661437',·1,·'gmx::PaddedVector::PaddedVector(std::initializer_list&lt;·value_type·&gt;·const·&amp;il)'],33 ········['../classgmx_1_1PaddedVector.xhtml#aae517037a7e2a04806a72deffe661437',·1,·'gmx::PaddedVector::PaddedVector(std::initializer_list&lt;·value_type·&gt;·const·&amp;il)'],
35 ········['../classgmx_1_1PaddedVector.xhtml#af634e58ae15af112df64a6e9f42a5460',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o,·const·Allocator·&amp;alloc)·noexcept'],34 ········['../classgmx_1_1PaddedVector.xhtml#af634e58ae15af112df64a6e9f42a5460',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o,·const·Allocator·&amp;alloc)·noexcept'],
 35 ········['../classgmx_1_1PaddedVector.xhtml#a99f036b6e7ea821ab24604474748c8f6',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o)·noexcept'],
36 ········['../classgmx_1_1PaddedVector.xhtml#ae8d292225db685d912d5be8f26d32d2d',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·const·allocator_type·&amp;allocator=Allocator())'],36 ········['../classgmx_1_1PaddedVector.xhtml#ae8d292225db685d912d5be8f26d32d2d',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·const·allocator_type·&amp;allocator=Allocator())'],
 37 ········['../classgmx_1_1PaddedVector.xhtml#a8a5f5975b2207677f1e956060b02c1d2',·1,·'gmx::PaddedVector::PaddedVector(allocator_type·const·&amp;allocator)'],
37 ········['../classgmx_1_1PaddedVector.xhtml#a1455b09f0cb0dd2b5f6ff5b092ecea08',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·const·&amp;o)'],38 ········['../classgmx_1_1PaddedVector.xhtml#a1455b09f0cb0dd2b5f6ff5b092ecea08',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·const·&amp;o)'],
38 ········['../classgmx_1_1PaddedVector.xhtml#a99f036b6e7ea821ab24604474748c8f6',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o)·noexcept'], 
39 ········['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx::PaddedVector&lt;·T,·Allocator·&gt;']39 ········['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx::PaddedVector&lt;·T,·Allocator·&gt;']
40 ····]],40 ····]],
41 ····['paddedvector_2ecpp_21',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]],41 ····['paddedvector_2ecpp_21',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]],
42 ····['paddedvector_2eh_22',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]],42 ····['paddedvector_2eh_22',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]],
43 ····['paddedvector_3c_20gmx_3a_3abasicvector_20_3e_23',·['PaddedVector&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],43 ····['paddedvector_3c_20gmx_3a_3abasicvector_20_3e_23',·['PaddedVector&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],
44 ····['paddedvector_3c_20real_20_3e_24',·['PaddedVector&lt;·real·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],44 ····['paddedvector_3c_20real_20_3e_24',·['PaddedVector&lt;·real·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],
45 ····['paddedvector_3c_20rvec_20_3e_25',·['PaddedVector&lt;·RVec·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],45 ····['paddedvector_3c_20rvec_20_3e_25',·['PaddedVector&lt;·RVec·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],
Offset 68, 38 lines modifiedOffset 68, 38 lines modified
68 ····['pairhash_41',·['pairHash',·['../structgmx_1_1pairHash.xhtml',·1,·'gmx']]],68 ····['pairhash_41',·['pairHash',·['../structgmx_1_1pairHash.xhtml',·1,·'gmx']]],
69 ····['pairlist_2ecpp_42',·['pairlist.cpp',·['../tests_2pairlist_8cpp.xhtml',·1,·'']]],69 ····['pairlist_2ecpp_42',·['pairlist.cpp',·['../tests_2pairlist_8cpp.xhtml',·1,·'']]],
70 ····['pairlist_5fimask_2eh_43',·['pairlist_imask.h',·['../pairlist__imask_8h.xhtml',·1,·'']]],70 ····['pairlist_5fimask_2eh_43',·['pairlist_imask.h',·['../pairlist__imask_8h.xhtml',·1,·'']]],
71 ····['pairlist_5fsimd_5fkernel_2ecpp_44',·['pairlist_simd_kernel.cpp',·['../pairlist__simd__kernel_8cpp.xhtml',·1,·'']]],71 ····['pairlist_5fsimd_5fkernel_2ecpp_44',·['pairlist_simd_kernel.cpp',·['../pairlist__simd__kernel_8cpp.xhtml',·1,·'']]],
72 ····['pairlist_5fsimd_5fkernel_2eh_45',·['pairlist_simd_kernel.h',·['../pairlist__simd__kernel_8h.xhtml',·1,·'']]],72 ····['pairlist_5fsimd_5fkernel_2eh_45',·['pairlist_simd_kernel.h',·['../pairlist__simd__kernel_8h.xhtml',·1,·'']]],
73 ····['pairlist_5ftuning_2ecpp_46',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]],73 ····['pairlist_5ftuning_2ecpp_46',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]],
74 ····['pairlist_5ftuning_2eh_47',·['pairlist_tuning.h',·['../pairlist__tuning_8h.xhtml',·1,·'']]],74 ····['pairlist_5ftuning_2eh_47',·['pairlist_tuning.h',·['../pairlist__tuning_8h.xhtml',·1,·'']]],
75 ····['pairlistcutoff_48',·['pairlistcutoff',·['../structgmx_1_1NbnxmKernelBenchOptions.xhtml#a2023ee62d6b1a45f5cc8bce187330699',·1,·'gmx::NbnxmKernelBenchOptions::pairlistCutoff'], 
76 ········['../structgmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03_1_1KernelOptions.xhtml#a99a1005d4246403b05b8dee487944485',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions::pairlistCutoff']75 ····['pairlistcutoff_48',·['pairlistcutoff',·['../structgmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03_1_1KernelOptions.xhtml#a99a1005d4246403b05b8dee487944485',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions::pairlistCutoff'],
 76 ········['../structgmx_1_1NbnxmKernelBenchOptions.xhtml#a2023ee62d6b1a45f5cc8bce187330699',·1,·'gmx::NbnxmKernelBenchOptions::pairlistCutoff']
77 ····]],77 ····]],
78 ····['pairlistinnerradius_49',·['pairlistInnerRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a51c4a118964f4b5213facfd765f76243',·1,·'gmx::nonbonded_verlet_t']]],78 ····['pairlistinnerradius_49',·['pairlistInnerRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a51c4a118964f4b5213facfd765f76243',·1,·'gmx::nonbonded_verlet_t']]],
79 ····['pairlistissimple_50',·['pairlistIsSimple',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a26c1965627a134ffaf8dc77448ae7f43',·1,·'gmx::nonbonded_verlet_t']]],79 ····['pairlistissimple_50',·['pairlistIsSimple',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a26c1965627a134ffaf8dc77448ae7f43',·1,·'gmx::nonbonded_verlet_t']]],
80 ····['pairlistouterradius_51',·['pairlistOuterRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a6d5f189da301555a408b19e4b782eb15',·1,·'gmx::nonbonded_verlet_t']]],80 ····['pairlistouterradius_51',·['pairlistOuterRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a6d5f189da301555a408b19e4b782eb15',·1,·'gmx::nonbonded_verlet_t']]],
81 ····['pairlistparams_52',·['pairlistparams',·['../structgmx_1_1PairlistParams.xhtml',·1,·'gmx::PairlistParams'],81 ····['pairlistparams_52',·['pairlistparams',·['../structgmx_1_1PairlistParams.xhtml',·1,·'gmx::PairlistParams'],
82 ········['../structgmx_1_1PairlistParams.xhtml#a5e50f9cb2a367fff511bb6fceb102545',·1,·'gmx::PairlistParams::PairlistParams()']82 ········['../structgmx_1_1PairlistParams.xhtml#a5e50f9cb2a367fff511bb6fceb102545',·1,·'gmx::PairlistParams::PairlistParams()']
83 ····]],83 ····]],
84 ····['pairlistparams_2ecpp_53',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]],84 ····['pairlistparams_2ecpp_53',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]],
85 ····['pairlistparams_2eh_54',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],85 ····['pairlistparams_2eh_54',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],
86 ····['pairlistset_55',·['pairlistset',·['../classgmx_1_1PairlistSets.xhtml#a0f73ad8dba4b6b59d20f9488611e1efc',·1,·'gmx::PairlistSets::pairlistSet()'],86 ····['pairlistset_55',·['pairlistset',·['../classgmx_1_1PairlistSets.xhtml#a0f73ad8dba4b6b59d20f9488611e1efc',·1,·'gmx::PairlistSets::pairlistSet()'],
87 ········['../classgmx_1_1PairlistSet.xhtml',·1,·'gmx::PairlistSet'], 
88 ········['../classgmx_1_1PairlistSet.xhtml#ae43d2e1d2818c66c47426aa57f40c09b',·1,·'gmx::PairlistSet::PairlistSet()']87 ········['../classgmx_1_1PairlistSet.xhtml#ae43d2e1d2818c66c47426aa57f40c09b',·1,·'gmx::PairlistSet::PairlistSet()'],
 88 ········['../classgmx_1_1PairlistSet.xhtml',·1,·'gmx::PairlistSet']
89 ····]],89 ····]],
90 ····['pairlistset_2ecpp_56',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],90 ····['pairlistset_2ecpp_56',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],
91 ····['pairlistset_2eh_57',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],91 ····['pairlistset_2eh_57',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],
92 ····['pairlistsets_58',·['pairlistsets',·['../classgmx_1_1PairlistSets.xhtml#a9375364a83138eae955b23cd199fd891',·1,·'gmx::PairlistSets::PairlistSets()'], 
93 ········['../structgmx_1_1nonbonded__verlet__t.xhtml#aeb0b1a81cdebaac68841abd89635e084',·1,·'gmx::nonbonded_verlet_t::pairlistSets()'],92 ····['pairlistsets_58',·['pairlistsets',·['../structgmx_1_1nonbonded__verlet__t.xhtml#aeb0b1a81cdebaac68841abd89635e084',·1,·'gmx::nonbonded_verlet_t::pairlistSets()'],
94 ········['../classgmx_1_1PairlistSets.xhtml',·1,·'gmx::PairlistSets']93 ········['../classgmx_1_1PairlistSets.xhtml',·1,·'gmx::PairlistSets'],
 94 ········['../classgmx_1_1PairlistSets.xhtml#a9375364a83138eae955b23cd199fd891',·1,·'gmx::PairlistSets::PairlistSets()']
95 ····]],95 ····]],
96 ····['pairlistsets_2eh_59',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],96 ····['pairlistsets_2eh_59',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],
 97 ····['pairlisttype_60',·['pairlisttype',·['../namespacegmx.xhtml#a988b986d35cacb4d435767ea6c57a0b5',·1,·'gmx::PairlistType'],
97 ····['pairlisttype_60',·['pairlisttype',·['../structgmx_1_1PairlistParams.xhtml#a2c83e42e8b3694d16f22bf12c5d9f7e2',·1,·'gmx::PairlistParams::pairlistType'],98 ········['../structgmx_1_1PairlistParams.xhtml#a2c83e42e8b3694d16f22bf12c5d9f7e2',·1,·'gmx::PairlistParams::pairlistType']
98 ········['../namespacegmx.xhtml#a988b986d35cacb4d435767ea6c57a0b5',·1,·'gmx::PairlistType'] 
99 ····]],99 ····]],
100 ····['pairlisttype_5f_61',·['pairlistType_',·['../structgmx_1_1Grid_1_1Geometry.xhtml#a8ded14d0f33cf006304ac9a707cbef4a',·1,·'gmx::Grid::Geometry']]],100 ····['pairlisttype_5f_61',·['pairlistType_',·['../structgmx_1_1Grid_1_1Geometry.xhtml#a8ded14d0f33cf006304ac9a707cbef4a',·1,·'gmx::Grid::Geometry']]],
101 ····['pairlistwork_2ecpp_62',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],101 ····['pairlistwork_2ecpp_62',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],
102 ····['pairlistwork_2eh_63',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],102 ····['pairlistwork_2eh_63',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],
103 ····['pairs_64',·['Pairs',·['../classListedForces.xhtml#a73e4fa54dfd332da42036d5ae893da47aa07a589a90362b3346324844a3ad87ff',·1,·'ListedForces']]],103 ····['pairs_64',·['Pairs',·['../classListedForces.xhtml#a73e4fa54dfd332da42036d5ae893da47aa07a589a90362b3346324844a3ad87ff',·1,·'ListedForces']]],
104 ····['pairs_2ecpp_65',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],104 ····['pairs_2ecpp_65',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],
105 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']105 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']
Offset 110, 51 lines modifiedOffset 110, 51 lines modified
110 ····]],110 ····]],
111 ····['pairsearch_2ecpp_68',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],111 ····['pairsearch_2ecpp_68',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],
112 ····['pairsearch_2eh_69',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],112 ····['pairsearch_2eh_69',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],
113 ····['pairsearchcoordinates_70',·['pairSearchCoordinates',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#af18643a5c0d8729b32e688d45fd7f8ca',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator']]],113 ····['pairsearchcoordinates_70',·['pairSearchCoordinates',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#af18643a5c0d8729b32e688d45fd7f8ca',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator']]],
114 ····['pairsearchwork_71',·['PairsearchWork',·['../structgmx_1_1PairsearchWork.xhtml',·1,·'gmx']]],114 ····['pairsearchwork_71',·['PairsearchWork',·['../structgmx_1_1PairsearchWork.xhtml',·1,·'gmx']]],
115 ····['paragraphbreak_72',·['paragraphBreak',·['../classgmx_1_1HelpWriterContext.xhtml#a6c24ca1470b3addda69ae236a6ea66b2',·1,·'gmx::HelpWriterContext']]],115 ····['paragraphbreak_72',·['paragraphBreak',·['../classgmx_1_1HelpWriterContext.xhtml#a6c24ca1470b3addda69ae236a6ea66b2',·1,·'gmx::HelpWriterContext']]],
116 ····['parallel_5f3dfft_5fexecute_5fgpu_5fwrapper_73',·['parallel_3dfft_execute_gpu_wrapper',·['../pme__gpu_8cpp.xhtml#a13b15b5d3a7003ff0dfdba02aadbc97e',·1,·'pme_gpu.cpp']]],116 ····['parallel_5f3dfft_5fexecute_5fgpu_5fwrapper_73',·['parallel_3dfft_execute_gpu_wrapper',·['../pme__gpu_8cpp.xhtml#a13b15b5d3a7003ff0dfdba02aadbc97e',·1,·'pme_gpu.cpp']]],
 117 ····['parallelconsistencyerror_74',·['parallelconsistencyerror',·['../classgmx_1_1ParallelConsistencyError.xhtml',·1,·'gmx::ParallelConsistencyError'],
117 ····['parallelconsistencyerror_74',·['parallelconsistencyerror',·['../classgmx_1_1ParallelConsistencyError.xhtml#a30850fa25d3059fa861607dd0eb20bd2',·1,·'gmx::ParallelConsistencyError::ParallelConsistencyError()'],118 ········['../classgmx_1_1ParallelConsistencyError.xhtml#a30850fa25d3059fa861607dd0eb20bd2',·1,·'gmx::ParallelConsistencyError::ParallelConsistencyError()']
118 ········['../classgmx_1_1ParallelConsistencyError.xhtml',·1,·'gmx::ParallelConsistencyError'] 
119 ····]],119 ····]],
120 ····['paralleldatastarted_75',·['paralleldatastarted',·['../classgmx_1_1IAnalysisDataModule.xhtml#aeca0c095b7f31aec0f58643bed0e0895',·1,·'gmx::IAnalysisDataModule::parallelDataStarted()'],120 ····['paralleldatastarted_75',·['paralleldatastarted',·['../classgmx_1_1IAnalysisDataModule.xhtml#aeca0c095b7f31aec0f58643bed0e0895',·1,·'gmx::IAnalysisDataModule::parallelDataStarted()'],
121 ········['../classgmx_1_1AnalysisDataModuleParallel.xhtml#ae58dd25d11bc02bd4af8b7f36df62edf',·1,·'gmx::AnalysisDataModuleParallel::parallelDataStarted()'],121 ········['../classgmx_1_1AnalysisDataModuleParallel.xhtml#ae58dd25d11bc02bd4af8b7f36df62edf',·1,·'gmx::AnalysisDataModuleParallel::parallelDataStarted()'],
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157 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pull__rotation_8cpp_03.xhtml#af94b35600673f3744fbf6caec27ac27c',·1,·'gmx::test::anonymous_namespace{pull_rotation.cpp}::Parameters'],157 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pull__rotation_8cpp_03.xhtml#af94b35600673f3744fbf6caec27ac27c',·1,·'gmx::test::anonymous_namespace{pull_rotation.cpp}::Parameters'],
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63 ····['qmtrans_5f_39',·['qmTrans_',·['../structgmx_1_1QMMMParameters.xhtml#a8e2f8f012ba8f6d14a7acc0a6e7fa12a',·1,·'gmx::QMMMParameters']]],63 ····['qmtrans_5f_39',·['qmTrans_',·['../structgmx_1_1QMMMParameters.xhtml#a8e2f8f012ba8f6d14a7acc0a6e7fa12a',·1,·'gmx::QMMMParameters']]],
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365 ····['selection_20methods_248',·['Custom·selection·methods',·['../page_module_selection_custom.xhtml',·1,·'page_selections']]],365 ····['selection_20methods_248',·['Custom·selection·methods',·['../page_module_selection_custom.xhtml',·1,·'page_selections']]],
366 ····['selection_20modifiers_249',·['selection·modifiers',·['../todo.xhtml#_todo000202',·1,·'Selection·modifiers'],366 ····['selection_20modifiers_249',·['selection·modifiers',·['../todo.xhtml#_todo000202',·1,·'Selection·modifiers'],
367 ········['../page_module_selection_custom.xhtml#selmethods_modifiers',·1,·'Selection·modifiers']367 ········['../page_module_selection_custom.xhtml#selmethods_modifiers',·1,·'Selection·modifiers']
368 ····]],368 ····]],
369 ····['selection_20parsing_250',·['Selection·parsing',·['../page_module_selection_parser.xhtml',·1,·'page_selections']]],369 ····['selection_20parsing_250',·['Selection·parsing',·['../page_module_selection_parser.xhtml',·1,·'page_selections']]],
370 ····['selection_2ecpp_251',·['selection.cpp',·['../selection_8cpp.xhtml',·1,·'']]],370 ····['selection_2ecpp_251',·['selection.cpp',·['../selection_8cpp.xhtml',·1,·'']]],
371 ····['selection_2eh_252',·['selection.h',·['../selection_8h.xhtml',·1,·'']]],371 ····['selection_2eh_252',·['selection.h',·['../selection_8h.xhtml',·1,·'']]],
 372 ····['selectioncollection_253',·['selectioncollection',·['../classgmx_1_1SelectionCollection.xhtml',·1,·'gmx::SelectionCollection'],
372 ····['selectioncollection_253',·['selectioncollection',·['../classgmx_1_1AnalysisDataPlotSettings.xhtml#aee72b1af0481b99ca67e0ca0beefaa28',·1,·'gmx::AnalysisDataPlotSettings::selectionCollection()'],373 ········['../classgmx_1_1AnalysisDataPlotSettings.xhtml#aee72b1af0481b99ca67e0ca0beefaa28',·1,·'gmx::AnalysisDataPlotSettings::selectionCollection()'],
373 ········['../classgmx_1_1SelectionCollection.xhtml',·1,·'gmx::SelectionCollection'], 
374 ········['../classgmx_1_1SelectionCollection.xhtml#af4c4da031a86714c51d96f203ecc80b8',·1,·'gmx::SelectionCollection::SelectionCollection()']374 ········['../classgmx_1_1SelectionCollection.xhtml#af4c4da031a86714c51d96f203ecc80b8',·1,·'gmx::SelectionCollection::SelectionCollection()']
375 ····]],375 ····]],
376 ····['selectioncollection_2ecpp_254',·['selectioncollection.cpp',·['../tests_2selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'],376 ····['selectioncollection_2ecpp_254',·['selectioncollection.cpp',·['../selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'],
377 ········['../selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)']377 ········['../tests_2selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)']
378 ····]],378 ····]],
379 ····['selectioncollection_2eh_255',·['selectioncollection.h',·['../selectioncollection_8h.xhtml',·1,·'']]],379 ····['selectioncollection_2eh_255',·['selectioncollection.h',·['../selectioncollection_8h.xhtml',·1,·'']]],
380 ····['selectioncollection_5fimpl_2eh_256',·['selectioncollection_impl.h',·['../selectioncollection__impl_8h.xhtml',·1,·'']]],380 ····['selectioncollection_5fimpl_2eh_256',·['selectioncollection_impl.h',·['../selectioncollection__impl_8h.xhtml',·1,·'']]],
381 ····['selectiondata_257',·['selectiondata',·['../classgmx_1_1internal_1_1SelectionData.xhtml',·1,·'gmx::internal::SelectionData'],381 ····['selectiondata_257',·['selectiondata',·['../classgmx_1_1internal_1_1SelectionData.xhtml',·1,·'gmx::internal::SelectionData'],
382 ········['../classgmx_1_1internal_1_1SelectionData.xhtml#a1424b17d6e37e120fe5f8f0eb74a99e7',·1,·'gmx::internal::SelectionData::SelectionData()']382 ········['../classgmx_1_1internal_1_1SelectionData.xhtml#a1424b17d6e37e120fe5f8f0eb74a99e7',·1,·'gmx::internal::SelectionData::SelectionData()']
383 ····]],383 ····]],
384 ····['selectiondatalist_258',·['SelectionDataList',·['../namespacegmx.xhtml#ab5559201ddf8596d12d99a3c3e45e989',·1,·'gmx']]],384 ····['selectiondatalist_258',·['SelectionDataList',·['../namespacegmx.xhtml#ab5559201ddf8596d12d99a3c3e45e989',·1,·'gmx']]],
385 ····['selectiondatapointer_259',·['SelectionDataPointer',·['../namespacegmx.xhtml#a0e73e50cc7002a24229fa6650b8ccfc8',·1,·'gmx']]],385 ····['selectiondatapointer_259',·['SelectionDataPointer',·['../namespacegmx.xhtml#a0e73e50cc7002a24229fa6650b8ccfc8',·1,·'gmx']]],
386 ····['selectionenums_2eh_260',·['selectionenums.h',·['../selectionenums_8h.xhtml',·1,·'']]],386 ····['selectionenums_2eh_260',·['selectionenums.h',·['../selectionenums_8h.xhtml',·1,·'']]],
387 ····['selectionevaluator_261',·['SelectionEvaluator',·['../classgmx_1_1SelectionEvaluator.xhtml',·1,·'gmx']]],387 ····['selectionevaluator_261',·['SelectionEvaluator',·['../classgmx_1_1SelectionEvaluator.xhtml',·1,·'gmx']]],
388 ····['selectionfileoption_262',·['selectionfileoption',·['../classgmx_1_1SelectionFileOption.xhtml#aa940b6e3a02a85f35fc15feb358c180a',·1,·'gmx::SelectionFileOption::SelectionFileOption()'],388 ····['selectionfileoption_262',·['selectionfileoption',·['../classgmx_1_1SelectionFileOption.xhtml#aa940b6e3a02a85f35fc15feb358c180a',·1,·'gmx::SelectionFileOption::SelectionFileOption()'],
389 ········['../classgmx_1_1SelectionFileOption.xhtml',·1,·'gmx::SelectionFileOption']389 ········['../classgmx_1_1SelectionFileOption.xhtml',·1,·'gmx::SelectionFileOption']
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391 ····['selectionfileoption_2eh_263',·['selectionfileoption.h',·['../selectionfileoption_8h.xhtml',·1,·'']]],391 ····['selectionfileoption_2eh_263',·['selectionfileoption.h',·['../selectionfileoption_8h.xhtml',·1,·'']]],
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392 ····['selectionfileoptioninfo_264',·['selectionfileoptioninfo',·['../classgmx_1_1SelectionFileOptionInfo.xhtml#a06b3244951d2d48ca1a043a0048c392b',·1,·'gmx::SelectionFileOptionInfo::SelectionFileOptionInfo()'],393 ········['../classgmx_1_1SelectionFileOptionInfo.xhtml#a06b3244951d2d48ca1a043a0048c392b',·1,·'gmx::SelectionFileOptionInfo::SelectionFileOptionInfo()']
393 ········['../classgmx_1_1SelectionFileOptionInfo.xhtml',·1,·'gmx::SelectionFileOptionInfo'] 
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395 ····['selectionfileoptionstorage_265',·['selectionfileoptionstorage',·['../classgmx_1_1SelectionFileOptionStorage.xhtml#a3aa962f9183980c1a4e3e9c240540cfd',·1,·'gmx::SelectionFileOptionStorage::SelectionFileOptionStorage()'],395 ····['selectionfileoptionstorage_265',·['selectionfileoptionstorage',·['../classgmx_1_1SelectionFileOptionStorage.xhtml#a3aa962f9183980c1a4e3e9c240540cfd',·1,·'gmx::SelectionFileOptionStorage::SelectionFileOptionStorage()'],
396 ········['../classgmx_1_1SelectionFileOptionStorage.xhtml',·1,·'gmx::SelectionFileOptionStorage']396 ········['../classgmx_1_1SelectionFileOptionStorage.xhtml',·1,·'gmx::SelectionFileOptionStorage']
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399 ····['selectionflag_267',·['SelectionFlag',·['../namespacegmx.xhtml#a19038c03ebc67b4c8e7da4ee81cbc836',·1,·'gmx']]],399 ····['selectionflag_267',·['SelectionFlag',·['../namespacegmx.xhtml#a19038c03ebc67b4c8e7da4ee81cbc836',·1,·'gmx']]],
400 ····['selectionflags_268',·['SelectionFlags',·['../namespacegmx.xhtml#a4d80aa80d970cd0d36eeac2f5d146dcf',·1,·'gmx']]],400 ····['selectionflags_268',·['SelectionFlags',·['../namespacegmx.xhtml#a4d80aa80d970cd0d36eeac2f5d146dcf',·1,·'gmx']]],
401 ····['selectionlist_269',·['SelectionList',·['../namespacegmx.xhtml#ac852a0801cf49723903e23bc77a32163',·1,·'gmx']]],401 ····['selectionlist_269',·['SelectionList',·['../namespacegmx.xhtml#ac852a0801cf49723903e23bc77a32163',·1,·'gmx']]],
402 ····['selectionlocation_270',·['SelectionLocation',·['../structgmx_1_1SelectionLocation.xhtml',·1,·'gmx']]],402 ····['selectionlocation_270',·['SelectionLocation',·['../structgmx_1_1SelectionLocation.xhtml',·1,·'gmx']]],
403 ····['selectionoption_271',·['selectionoption',·['../classgmx_1_1SelectionOption.xhtml',·1,·'gmx::SelectionOption'],403 ····['selectionoption_271',·['selectionoption',·['../classgmx_1_1SelectionOption.xhtml',·1,·'gmx::SelectionOption'],
404 ········['../classgmx_1_1SelectionOption.xhtml#a3b7fd0aeff67eb82d3e42adfe912ee4d',·1,·'gmx::SelectionOption::SelectionOption()']404 ········['../classgmx_1_1SelectionOption.xhtml#a3b7fd0aeff67eb82d3e42adfe912ee4d',·1,·'gmx::SelectionOption::SelectionOption()']
405 ····]],405 ····]],
406 ····['selectionoption_2ecpp_272',·['selectionoption.cpp',·['../tests_2selectionoption_8cpp.xhtml',·1,·'(Global·Namespace)'],406 ····['selectionoption_2ecpp_272',·['selectionoption.cpp',·['../selectionoption_8cpp.xhtml',·1,·'(Global·Namespace)'],
407 ········['../selectionoption_8cpp.xhtml',·1,·'(Global·Namespace)']407 ········['../tests_2selectionoption_8cpp.xhtml',·1,·'(Global·Namespace)']
408 ····]],408 ····]],
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410 ····['selectionoptionbehavior_274',·['selectionoptionbehavior',·['../classgmx_1_1SelectionOptionBehavior.xhtml#a21603fb725d94a93250b0be84d3d7a6c',·1,·'gmx::SelectionOptionBehavior::SelectionOptionBehavior()'],410 ····['selectionoptionbehavior_274',·['selectionoptionbehavior',·['../classgmx_1_1SelectionOptionBehavior.xhtml#a21603fb725d94a93250b0be84d3d7a6c',·1,·'gmx::SelectionOptionBehavior::SelectionOptionBehavior()'],
411 ········['../classgmx_1_1SelectionOptionBehavior.xhtml',·1,·'gmx::SelectionOptionBehavior']411 ········['../classgmx_1_1SelectionOptionBehavior.xhtml',·1,·'gmx::SelectionOptionBehavior']
412 ····]],412 ····]],
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414 ····['selectionoptionbehavior_2eh_276',·['selectionoptionbehavior.h',·['../selectionoptionbehavior_8h.xhtml',·1,·'']]],414 ····['selectionoptionbehavior_2eh_276',·['selectionoptionbehavior.h',·['../selectionoptionbehavior_8h.xhtml',·1,·'']]],
415 ····['selectionoptioninfo_277',·['selectionoptioninfo',·['../classgmx_1_1SelectionOptionInfo.xhtml',·1,·'gmx::SelectionOptionInfo'], 
416 ········['../classgmx_1_1SelectionOptionInfo.xhtml#a86d460125f437e3a579f100685a5d46f',·1,·'gmx::SelectionOptionInfo::SelectionOptionInfo()']415 ····['selectionoptioninfo_277',·['selectionoptioninfo',·['../classgmx_1_1SelectionOptionInfo.xhtml#a86d460125f437e3a579f100685a5d46f',·1,·'gmx::SelectionOptionInfo::SelectionOptionInfo()'],
 416 ········['../classgmx_1_1SelectionOptionInfo.xhtml',·1,·'gmx::SelectionOptionInfo']
417 ····]],417 ····]],
418 ····['selectionoptionmanager_278',·['selectionoptionmanager',·['../classgmx_1_1SelectionOptionManager.xhtml',·1,·'gmx::SelectionOptionManager'],418 ····['selectionoptionmanager_278',·['selectionoptionmanager',·['../classgmx_1_1SelectionOptionManager.xhtml',·1,·'gmx::SelectionOptionManager'],
419 ········['../classgmx_1_1SelectionOptionManager.xhtml#abfcd429376957cf60d31daed35726a85',·1,·'gmx::SelectionOptionManager::SelectionOptionManager()']419 ········['../classgmx_1_1SelectionOptionManager.xhtml#abfcd429376957cf60d31daed35726a85',·1,·'gmx::SelectionOptionManager::SelectionOptionManager()']
420 ····]],420 ····]],
421 ····['selectionoptionmanager_2ecpp_279',·['selectionoptionmanager.cpp',·['../selectionoptionmanager_8cpp.xhtml',·1,·'']]],421 ····['selectionoptionmanager_2ecpp_279',·['selectionoptionmanager.cpp',·['../selectionoptionmanager_8cpp.xhtml',·1,·'']]],
422 ····['selectionoptionmanager_2eh_280',·['selectionoptionmanager.h',·['../selectionoptionmanager_8h.xhtml',·1,·'']]],422 ····['selectionoptionmanager_2eh_280',·['selectionoptionmanager.h',·['../selectionoptionmanager_8h.xhtml',·1,·'']]],
423 ····['selectionoptionstorage_281',·['selectionoptionstorage',·['../classgmx_1_1SelectionOptionStorage.xhtml',·1,·'gmx::SelectionOptionStorage'],423 ····['selectionoptionstorage_281',·['selectionoptionstorage',·['../classgmx_1_1SelectionOptionStorage.xhtml#aecf586e2202f78eaf691bfda3ce76ce3',·1,·'gmx::SelectionOptionStorage::SelectionOptionStorage()'],
424 ········['../classgmx_1_1Selection.xhtml#a3dd781afa3dc217f65462ce050a61552',·1,·'gmx::Selection::SelectionOptionStorage'],424 ········['../classgmx_1_1SelectionOptionManager.xhtml#a3dd781afa3dc217f65462ce050a61552',·1,·'gmx::SelectionOptionManager::SelectionOptionStorage'],
425 ········['../classgmx_1_1SelectionOption.xhtml#a3dd781afa3dc217f65462ce050a61552',·1,·'gmx::SelectionOption::SelectionOptionStorage'],425 ········['../classgmx_1_1SelectionOption.xhtml#a3dd781afa3dc217f65462ce050a61552',·1,·'gmx::SelectionOption::SelectionOptionStorage'],
426 ········['../classgmx_1_1SelectionOptionStorage.xhtml#aecf586e2202f78eaf691bfda3ce76ce3',·1,·'gmx::SelectionOptionStorage::SelectionOptionStorage()'], 
427 ········['../classgmx_1_1SelectionOptionManager.xhtml#a3dd781afa3dc217f65462ce050a61552',·1,·'gmx::SelectionOptionManager::SelectionOptionStorage']426 ········['../classgmx_1_1Selection.xhtml#a3dd781afa3dc217f65462ce050a61552',·1,·'gmx::Selection::SelectionOptionStorage'],
 427 ········['../classgmx_1_1SelectionOptionStorage.xhtml',·1,·'gmx::SelectionOptionStorage']
428 ····]],428 ····]],
429 ····['selectionoptionstorage_2eh_282',·['selectionoptionstorage.h',·['../selectionoptionstorage_8h.xhtml',·1,·'']]],429 ····['selectionoptionstorage_2eh_282',·['selectionoptionstorage.h',·['../selectionoptionstorage_8h.xhtml',·1,·'']]],
430 ····['selectionoptiontest_283',·['SelectionOptionTest',·['../namespacegmx_1_1test_1_1anonymous__namespace_02selectionoption_8cpp_03.xhtml#a487dc4b515d818fb5a19fc87eb689073',·1,·'gmx::test::anonymous_namespace{selectionoption.cpp}']]],430 ····['selectionoptiontest_283',·['SelectionOptionTest',·['../namespacegmx_1_1test_1_1anonymous__namespace_02selectionoption_8cpp_03.xhtml#a487dc4b515d818fb5a19fc87eb689073',·1,·'gmx::test::anonymous_namespace{selectionoption.cpp}']]],
431 ····['selectionparserparameter_284',·['SelectionParserParameter',·['../classgmx_1_1SelectionParserParameter.xhtml',·1,·'gmx']]],431 ····['selectionparserparameter_284',·['SelectionParserParameter',·['../classgmx_1_1SelectionParserParameter.xhtml',·1,·'gmx']]],
432 ····['selectionparserparameterlist_285',·['SelectionParserParameterList',·['../namespacegmx.xhtml#a2000e8454576fcfcd5a8fdc5d060da4e',·1,·'gmx']]],432 ····['selectionparserparameterlist_285',·['SelectionParserParameterList',·['../namespacegmx.xhtml#a2000e8454576fcfcd5a8fdc5d060da4e',·1,·'gmx']]],
433 ····['selectionparserparameterlistpointer_286',·['SelectionParserParameterListPointer',·['../namespacegmx.xhtml#af69a9fb56d051d95e77a90d57a9fa42e',·1,·'gmx']]],433 ····['selectionparserparameterlistpointer_286',·['SelectionParserParameterListPointer',·['../namespacegmx.xhtml#af69a9fb56d051d95e77a90d57a9fa42e',·1,·'gmx']]],
434 ····['selectionparsersymbol_287',·['SelectionParserSymbol',·['../classgmx_1_1SelectionParserSymbol.xhtml',·1,·'gmx']]],434 ····['selectionparsersymbol_287',·['SelectionParserSymbol',·['../classgmx_1_1SelectionParserSymbol.xhtml',·1,·'gmx']]],
435 ····['selectionparsersymboliterator_288',·['selectionparsersymboliterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a52ff44641590304f3b65ae1e3ecf1ebf',·1,·'gmx::SelectionParserSymbolTable::SelectionParserSymbolIterator'],435 ····['selectionparsersymboliterator_288',·['selectionparsersymboliterator',·['../classgmx_1_1SelectionParserSymbolIterator.xhtml#af149c9045ffc0192c59dd228aba393f4',·1,·'gmx::SelectionParserSymbolIterator::SelectionParserSymbolIterator()'],
436 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml#af149c9045ffc0192c59dd228aba393f4',·1,·'gmx::SelectionParserSymbolIterator::SelectionParserSymbolIterator()'],436 ········['../classgmx_1_1SelectionParserSymbolTable.xhtml#a52ff44641590304f3b65ae1e3ecf1ebf',·1,·'gmx::SelectionParserSymbolTable::SelectionParserSymbolIterator'],
437 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml',·1,·'gmx::SelectionParserSymbolIterator']437 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml',·1,·'gmx::SelectionParserSymbolIterator']
438 ····]],438 ····]],
439 ····['selectionparsersymboltable_289',·['selectionparsersymboltable',·['../classgmx_1_1SelectionParserSymbol.xhtml#a6f47492a3d07b5596df7c88528a15e1c',·1,·'gmx::SelectionParserSymbol::SelectionParserSymbolTable'],439 ····['selectionparsersymboltable_289',·['selectionparsersymboltable',·['../classgmx_1_1SelectionParserSymbolTable.xhtml',·1,·'gmx::SelectionParserSymbolTable'],
440 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml#a6f47492a3d07b5596df7c88528a15e1c',·1,·'gmx::SelectionParserSymbolIterator::SelectionParserSymbolTable'],440 ········['../classgmx_1_1SelectionParserSymbol.xhtml#a6f47492a3d07b5596df7c88528a15e1c',·1,·'gmx::SelectionParserSymbol::SelectionParserSymbolTable'],
441 ········['../classgmx_1_1SelectionParserSymbolTable.xhtml#a0e527683bcbb13c1ccf66187e380c3a6',·1,·'gmx::SelectionParserSymbolTable::SelectionParserSymbolTable()'],441 ········['../classgmx_1_1SelectionParserSymbolTable.xhtml#a0e527683bcbb13c1ccf66187e380c3a6',·1,·'gmx::SelectionParserSymbolTable::SelectionParserSymbolTable()'],
442 ········['../classgmx_1_1SelectionParserSymbolTable.xhtml',·1,·'gmx::SelectionParserSymbolTable']442 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml#a6f47492a3d07b5596df7c88528a15e1c',·1,·'gmx::SelectionParserSymbolIterator::SelectionParserSymbolTable']
443 ····]],443 ····]],
444 ····['selectionparservalue_290',·['SelectionParserValue',·['../classgmx_1_1SelectionParserValue.xhtml',·1,·'gmx']]],444 ····['selectionparservalue_290',·['SelectionParserValue',·['../classgmx_1_1SelectionParserValue.xhtml',·1,·'gmx']]],
445 ····['selectionparservaluelist_291',·['SelectionParserValueList',·['../namespacegmx.xhtml#aec46c9561c55f7595677160ee727395d',·1,·'gmx']]],445 ····['selectionparservaluelist_291',·['SelectionParserValueList',·['../namespacegmx.xhtml#aec46c9561c55f7595677160ee727395d',·1,·'gmx']]],
446 ····['selectionparservaluelistpointer_292',·['SelectionParserValueListPointer',·['../namespacegmx.xhtml#a043953ace26fa6e1f17f90245e3a29bd',·1,·'gmx']]],446 ····['selectionparservaluelistpointer_292',·['SelectionParserValueListPointer',·['../namespacegmx.xhtml#a043953ace26fa6e1f17f90245e3a29bd',·1,·'gmx']]],
447 ····['selectionposition_293',·['selectionposition',·['../classgmx_1_1SelectionPosition.xhtml#a367587f7e23b341a85ae5d308b8a0ef8',·1,·'gmx::SelectionPosition::SelectionPosition()'],447 ····['selectionposition_293',·['selectionposition',·['../classgmx_1_1SelectionPosition.xhtml#a367587f7e23b341a85ae5d308b8a0ef8',·1,·'gmx::SelectionPosition::SelectionPosition()'],
448 ········['../classgmx_1_1SelectionPosition.xhtml',·1,·'gmx::SelectionPosition']448 ········['../classgmx_1_1SelectionPosition.xhtml',·1,·'gmx::SelectionPosition']
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511 ····['sendinitdata_332',·['sendInitData',·['../classgmx_1_1MimicCommunicator.xhtml#a9c08a5c6effe79ce071a85ff228da148',·1,·'gmx::MimicCommunicator']]],511 ····['sendinitdata_332',·['sendInitData',·['../classgmx_1_1MimicCommunicator.xhtml#a9c08a5c6effe79ce071a85ff228da148',·1,·'gmx::MimicCommunicator']]],
512 ····['sendxbuf_333',·['sendxbuf',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a8406c909832be820f0ca7940cd86990b',·1,·'gmx::ImdSession::Impl']]],512 ····['sendxbuf_333',·['sendxbuf',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a8406c909832be820f0ca7940cd86990b',·1,·'gmx::ImdSession::Impl']]],
513 ····['separatedhdlfile_334',·['SeparateDhdlFile',·['../md__enums_8h.xhtml#ae8d0187ba4608fb1f8713e7e9d78c8ba',·1,·'md_enums.h']]],513 ····['separatedhdlfile_334',·['SeparateDhdlFile',·['../md__enums_8h.xhtml#ae8d0187ba4608fb1f8713e7e9d78c8ba',·1,·'md_enums.h']]],
514 ····['separatepmerankspermitted_335',·['SeparatePmeRanksPermitted',·['../classgmx_1_1SeparatePmeRanksPermitted.xhtml',·1,·'gmx']]],514 ····['separatepmerankspermitted_335',·['SeparatePmeRanksPermitted',·['../classgmx_1_1SeparatePmeRanksPermitted.xhtml',·1,·'gmx']]],
515 ····['seqindex_5f_336',·['seqIndex_',·['../classgmx_1_1test_1_1TestReferenceChecker_1_1Impl.xhtml#a5de7f1436e0bfefd57108e96072cf242',·1,·'gmx::test::TestReferenceChecker::Impl']]],515 ····['seqindex_5f_336',·['seqIndex_',·['../classgmx_1_1test_1_1TestReferenceChecker_1_1Impl.xhtml#a5de7f1436e0bfefd57108e96072cf242',·1,·'gmx::test::TestReferenceChecker::Impl']]],
516 ····['sequence_20diagrams_337',·['Sequence·diagrams',·['../page_modularsimulator.xhtml#autotoc_md15',·1,·'']]],516 ····['sequence_20diagrams_337',·['Sequence·diagrams',·['../page_modularsimulator.xhtml#autotoc_md15',·1,·'']]],
517 ····['serialize_338',·['serialize',·['../classStringTableEntry.xhtml#a247dac31349e22ce9fbd2d3bffc55391',·1,·'StringTableEntry::serialize()'],517 ····['serialize_338',·['serialize',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a50048c80aa705da4cef888a46a967798',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}::serialize(ISerializer·*serializer,·ContainerType·*valueContainer)'],
518 ········['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#acf297bf2a7ec62dea44eb8b365d03ab0',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}::serialize()'],518 ········['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#acf297bf2a7ec62dea44eb8b365d03ab0',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}::serialize(ISerializer·*serializer,·ContainerType·*valueContainer)'],
519 ········['../classgmx_1_1WriteCheckpointDataHolder.xhtml#a7280a156bf095d56ba0dd6603f66695c',·1,·'gmx::WriteCheckpointDataHolder::serialize()'], 
520 ········['../classgmx_1_1AwhParams.xhtml#af13d6b0b5b25414cbe239ee68ee7d77b',·1,·'gmx::AwhParams::serialize()'],519 ········['../classgmx_1_1AwhParams.xhtml#af13d6b0b5b25414cbe239ee68ee7d77b',·1,·'gmx::AwhParams::serialize()'],
521 ········['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a50048c80aa705da4cef888a46a967798',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}::serialize(ISerializer·*serializer,·ContainerType·*valueContainer)']520 ········['../classgmx_1_1WriteCheckpointDataHolder.xhtml#a7280a156bf095d56ba0dd6603f66695c',·1,·'gmx::WriteCheckpointDataHolder::serialize()'],
 521 ········['../classStringTableEntry.xhtml#a247dac31349e22ce9fbd2d3bffc55391',·1,·'StringTableEntry::serialize()']
522 ····]],522 ····]],
523 ····['serializeasint32_339',·['serializeAsInt32',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a21f390715ba1be46887d59e4d0857c5d',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],523 ····['serializeasint32_339',·['serializeAsInt32',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a21f390715ba1be46887d59e4d0857c5d',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
524 ····['serializecrystallographicskewdata_340',·['serializeCrystallographicSkewData',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a03ec44827db007bff7a4b464e6f60946',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],524 ····['serializecrystallographicskewdata_340',·['serializeCrystallographicSkewData',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a03ec44827db007bff7a4b464e6f60946',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
525 ····['serializedeviceinformations_341',·['serializedeviceinformations',·['../device__management__common_8cpp.xhtml#a0474af76f1cd285db14571db25ab25cb',·1,·'serializeDeviceInformations(const·std::vector&lt;·std::unique_ptr&lt;·DeviceInformation·&gt;·&gt;·&amp;deviceInfoList,·gmx::ISerializer·*serializer):&#160;device_management_common.cpp'],525 ····['serializedeviceinformations_341',·['serializedeviceinformations',·['../device__management_8h.xhtml#a0474af76f1cd285db14571db25ab25cb',·1,·'serializeDeviceInformations(const·std::vector&lt;·std::unique_ptr&lt;·DeviceInformation·&gt;·&gt;·&amp;deviceInfoList,·gmx::ISerializer·*serializer):&#160;device_management_common.cpp'],
526 ········['../device__management_8h.xhtml#a0474af76f1cd285db14571db25ab25cb',·1,·'serializeDeviceInformations(const·std::vector&lt;·std::unique_ptr&lt;·DeviceInformation·&gt;·&gt;·&amp;deviceInfoList,·gmx::ISerializer·*serializer):&#160;device_management_common.cpp']526 ········['../device__management__common_8cpp.xhtml#a0474af76f1cd285db14571db25ab25cb',·1,·'serializeDeviceInformations(const·std::vector&lt;·std::unique_ptr&lt;·DeviceInformation·&gt;·&gt;·&amp;deviceInfoList,·gmx::ISerializer·*serializer):&#160;device_management_common.cpp']
527 ····]],527 ····]],
528 ····['serializedistance_342',·['serializeDistance',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#ad082c292293ec38f61e8e8d7099adfc1',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],528 ····['serializedistance_342',·['serializeDistance',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#ad082c292293ec38f61e8e8d7099adfc1',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
529 ····['serializefepstatevalue_343',·['serializeFEPStateValue',·['../namespaceanonymous__namespace_02atoms_8cpp_03.xhtml#affc6d54d2995d645c93d6ce969d08b60',·1,·'anonymous_namespace{atoms.cpp}']]],529 ····['serializefepstatevalue_343',·['serializeFEPStateValue',·['../namespaceanonymous__namespace_02atoms_8cpp_03.xhtml#affc6d54d2995d645c93d6ce969d08b60',·1,·'anonymous_namespace{atoms.cpp}']]],
530 ····['serializeindex_344',·['serializeIndex',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a9f8b9fdd59cb7ab0c3b02ba9049086ba',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],530 ····['serializeindex_344',·['serializeIndex',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a9f8b9fdd59cb7ab0c3b02ba9049086ba',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
531 ····['serializeindices_345',·['serializeIndices',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a54d8c4a0fd3adda2006c2e87469a9fbe',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],531 ····['serializeindices_345',·['serializeIndices',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a54d8c4a0fd3adda2006c2e87469a9fbe',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
532 ····['serializekeyvaluetree_346',·['serializeKeyValueTree',·['../group__module__utility.xhtml#gac492f6f7f07670658a028ddddaf2b2ab',·1,·'gmx']]],532 ····['serializekeyvaluetree_346',·['serializeKeyValueTree',·['../group__module__utility.xhtml#gac492f6f7f07670658a028ddddaf2b2ab',·1,·'gmx']]],
533 ····['serializemrcdensitymapheader_347',·['serializeMrcDensityMapHeader',·['../namespacegmx.xhtml#a5155703ab2ced2f51fb4533e20006061',·1,·'gmx']]],533 ····['serializemrcdensitymapheader_347',·['serializeMrcDensityMapHeader',·['../namespacegmx.xhtml#a5155703ab2ced2f51fb4533e20006061',·1,·'gmx']]],
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982 ····['settimestep_2ecpp_629',·['settimestep.cpp',·['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],982 ····['settimestep_2ecpp_629',·['settimestep.cpp',·['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],
983 ········['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']983 ········['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']
984 ····]],984 ····]],
985 ····['settimestep_2eh_630',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],985 ····['settimestep_2eh_630',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],
986 ····['settimesteppointer_631',·['SetTimeStepPointer',·['../namespacegmx.xhtml#a5d563d919db266cb4cdd3cecedefec5d',·1,·'gmx']]],986 ····['settimesteppointer_631',·['SetTimeStepPointer',·['../namespacegmx.xhtml#a5d563d919db266cb4cdd3cecedefec5d',·1,·'gmx']]],
987 ····['settimesteptest_632',·['SetTimeStepTest',·['../classgmx_1_1test_1_1SetTimeStepTest.xhtml',·1,·'gmx::test']]],987 ····['settimesteptest_632',·['SetTimeStepTest',·['../classgmx_1_1test_1_1SetTimeStepTest.xhtml',·1,·'gmx::test']]],
988 ····['settimeunit_633',·['settimeunit',·['../classgmx_1_1AnalysisDataPlotSettings.xhtml#ab3900746c3f558d239ee57403559500c',·1,·'gmx::AnalysisDataPlotSettings::setTimeUnit()'],988 ····['settimeunit_633',·['settimeunit',·['../classgmx_1_1TimeUnitBehavior.xhtml#a393890269cb7a4cc6dc8bb97682f704d',·1,·'gmx::TimeUnitBehavior::setTimeUnit()'],
989 ········['../classgmx_1_1TimeUnitManager.xhtml#ad39df799df8c1dcbf6b0006f247aa11f',·1,·'gmx::TimeUnitManager::setTimeUnit()'],989 ········['../classgmx_1_1TimeUnitManager.xhtml#ad39df799df8c1dcbf6b0006f247aa11f',·1,·'gmx::TimeUnitManager::setTimeUnit()'],
990 ········['../classgmx_1_1TimeUnitBehavior.xhtml#a393890269cb7a4cc6dc8bb97682f704d',·1,·'gmx::TimeUnitBehavior::setTimeUnit(TimeUnit·unit)']990 ········['../classgmx_1_1AnalysisDataPlotSettings.xhtml#ab3900746c3f558d239ee57403559500c',·1,·'gmx::AnalysisDataPlotSettings::setTimeUnit()']
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29 ····['uniformrealdistribution_2eh_15',·['uniformrealdistribution.h',·['../uniformrealdistribution_8h.xhtml',·1,·'']]],29 ····['uniformrealdistribution_2eh_15',·['uniformrealdistribution.h',·['../uniformrealdistribution_8h.xhtml',·1,·'']]],
30 ····['uniformrealdistribution_3c_20real_20_3e_16',·['UniformRealDistribution&lt;·real·&gt;',·['../classgmx_1_1UniformRealDistribution.xhtml',·1,·'gmx']]],30 ····['uniformrealdistribution_3c_20real_20_3e_16',·['UniformRealDistribution&lt;·real·&gt;',·['../classgmx_1_1UniformRealDistribution.xhtml',·1,·'gmx']]],
31 ····['unionfind_2ecpp_17',·['unionfind.cpp',·['../unionfind_8cpp.xhtml',·1,·'']]],31 ····['unionfind_2ecpp_17',·['unionfind.cpp',·['../unionfind_8cpp.xhtml',·1,·'']]],
32 ····['unionfind_2eh_18',·['unionfind.h',·['../unionfind_8h.xhtml',·1,·'']]],32 ····['unionfind_2eh_18',·['unionfind.h',·['../unionfind_8h.xhtml',·1,·'']]],
33 ····['unionfinder_19',·['UnionFinder',·['../classgmx_1_1UnionFinder.xhtml',·1,·'gmx']]],33 ····['unionfinder_19',·['UnionFinder',·['../classgmx_1_1UnionFinder.xhtml',·1,·'gmx']]],
34 ····['unique_5fcptr_20',·['unique_cptr',·['../namespacegmx.xhtml#a89d1da25b1e1f9331f1fe99b15072eac',·1,·'gmx']]],34 ····['unique_5fcptr_20',·['unique_cptr',·['../namespacegmx.xhtml#a89d1da25b1e1f9331f1fe99b15072eac',·1,·'gmx']]],
35 ····['unique_5fcptr_2eh_21',·['unique_cptr.h',·['../unique__cptr_8h.xhtml',·1,·'']]],35 ····['unique_5fcptr_2eh_21',·['unique_cptr.h',·['../unique__cptr_8h.xhtml',·1,·'']]],
36 ····['uniquedeviceid_22',·['uniquedeviceid',·['../device__management_8h.xhtml#ab7595ed839026b4d41d8eb72701a80eb',·1,·'uniqueDeviceId(const·DeviceInformation·&amp;deviceInfo):&#160;device_management_common.cpp'],36 ····['uniquedeviceid_22',·['uniquedeviceid',·['../device__management__common_8cpp.xhtml#ab7595ed839026b4d41d8eb72701a80eb',·1,·'uniqueDeviceId(const·DeviceInformation·&amp;deviceInfo):&#160;device_management_common.cpp'],
37 ········['../device__management__common_8cpp.xhtml#ab7595ed839026b4d41d8eb72701a80eb',·1,·'uniqueDeviceId(const·DeviceInformation·&amp;deviceInfo):&#160;device_management_common.cpp']37 ········['../device__management_8h.xhtml#ab7595ed839026b4d41d8eb72701a80eb',·1,·'uniqueDeviceId(const·DeviceInformation·&amp;deviceInfo):&#160;device_management_common.cpp']
38 ····]],38 ····]],
39 ····['unit_23',·['unit',·['../structUmbrellaOptions.xhtml#ae5d2dca38270c084eb3386aa26b9b959',·1,·'UmbrellaOptions::unit'],39 ····['unit_23',·['unit',·['../structUmbrellaOptions.xhtml#ae5d2dca38270c084eb3386aa26b9b959',·1,·'UmbrellaOptions::unit'],
40 ········['../classgmx_1_1EnergyTerm.xhtml#aef5ad0000c2fbbc74c57f0b5e0ddb409',·1,·'gmx::EnergyTerm::unit()']40 ········['../classgmx_1_1EnergyTerm.xhtml#aef5ad0000c2fbbc74c57f0b5e0ddb409',·1,·'gmx::EnergyTerm::unit()']
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42 ····['unitcellinfo_24',·['unitcellinfo',·['../structUnitCellInfo.xhtml#a9d3636ef8212130c876d2cbd16dcc69a',·1,·'UnitCellInfo::UnitCellInfo()'],43 ········['../structUnitCellInfo.xhtml#a9d3636ef8212130c876d2cbd16dcc69a',·1,·'UnitCellInfo::UnitCellInfo()']
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44 ····]],44 ····]],
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46 ····['unitcellisrectangular_26',·['UnitCellIsRectangular',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a8e7bda81ce54b8cf90c3b856c83e7d9f',·1,·'gmx']]],46 ····['unitcellisrectangular_26',·['UnitCellIsRectangular',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a8e7bda81ce54b8cf90c3b856c83e7d9f',·1,·'gmx']]],
47 ····['unitcellistriclinic_27',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]],47 ····['unitcellistriclinic_27',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]],
48 ····['unitcelltype_28',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],48 ····['unitcelltype_28',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],
49 ····['unitcelltypenames_29',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],49 ····['unitcelltypenames_29',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],
50 ····['unittest_5fmain_2ecpp_30',·['unittest_main.cpp',·['../unittest__main_8cpp.xhtml',·1,·'']]],50 ····['unittest_5fmain_2ecpp_30',·['unittest_main.cpp',·['../unittest__main_8cpp.xhtml',·1,·'']]],
51 ····['unitvector_31',·['unitvector',·['../namespacegmx.xhtml#a53215047e2f488dfbf48164090c07b40',·1,·'gmx::unitVector()'],51 ····['unitvector_31',·['unitvector',·['../namespacegmx.xhtml#a53215047e2f488dfbf48164090c07b40',·1,·'gmx::unitVector()'],
52 ········['../classgmx_1_1BasicVector.xhtml#a2fc805de143df5ecfe38f2cb50d84e6c',·1,·'gmx::BasicVector::unitVector()']52 ········['../classgmx_1_1BasicVector.xhtml#a2fc805de143df5ecfe38f2cb50d84e6c',·1,·'gmx::BasicVector::unitVector()']
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55 ····['unknown_33',·['unknown',·['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], 
56 ········['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],55 ····['unknown_33',·['unknown',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],
57 ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown']56 ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'],
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67 ········['../structgmx__ana__selmethod__t.xhtml#a18d9fe0bff35116b4e12cc63c381fb47',·1,·'gmx_ana_selmethod_t::update'],68 ········['../structgmx__ana__selmethod__t.xhtml#a18d9fe0bff35116b4e12cc63c381fb47',·1,·'gmx_ana_selmethod_t::update'],
68 ········['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'],69 ········['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()']
69 ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update'] 
70 ····]],70 ····]],
71 ····['update_5fconstrain_5fgpu_2eh_42',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]],71 ····['update_5fconstrain_5fgpu_2eh_42',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]],
72 ····['update_5fconstrain_5fgpu_5fimpl_2ecpp_43',·['update_constrain_gpu_impl.cpp',·['../update__constrain__gpu__impl_8cpp.xhtml',·1,·'']]],72 ····['update_5fconstrain_5fgpu_5fimpl_2ecpp_43',·['update_constrain_gpu_impl.cpp',·['../update__constrain__gpu__impl_8cpp.xhtml',·1,·'']]],
73 ····['update_5fconstrain_5fgpu_5fimpl_2eh_44',·['update_constrain_gpu_impl.h',·['../update__constrain__gpu__impl_8h.xhtml',·1,·'']]],73 ····['update_5fconstrain_5fgpu_5fimpl_2eh_44',·['update_constrain_gpu_impl.h',·['../update__constrain__gpu__impl_8h.xhtml',·1,·'']]],
74 ····['update_5fconstrain_5fgpu_5fimpl_5fstubs_2ecpp_45',·['update_constrain_gpu_impl_stubs.cpp',·['../update__constrain__gpu__impl__stubs_8cpp.xhtml',·1,·'']]],74 ····['update_5fconstrain_5fgpu_5fimpl_5fstubs_2ecpp_45',·['update_constrain_gpu_impl_stubs.cpp',·['../update__constrain__gpu__impl__stubs_8cpp.xhtml',·1,·'']]],
75 ····['update_5fconstrain_5fgpu_5finternal_2eh_46',·['update_constrain_gpu_internal.h',·['../update__constrain__gpu__internal_8h.xhtml',·1,·'']]],75 ····['update_5fconstrain_5fgpu_5finternal_2eh_46',·['update_constrain_gpu_internal.h',·['../update__constrain__gpu__internal_8h.xhtml',·1,·'']]],
76 ····['update_5fconstrain_5fgpu_5finternal_5fsycl_2ecpp_47',·['update_constrain_gpu_internal_sycl.cpp',·['../update__constrain__gpu__internal__sycl_8cpp.xhtml',·1,·'']]],76 ····['update_5fconstrain_5fgpu_5finternal_5fsycl_2ecpp_47',·['update_constrain_gpu_internal_sycl.cpp',·['../update__constrain__gpu__internal__sycl_8cpp.xhtml',·1,·'']]],
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127 ····['updatepositions_87',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],127 ····['updatepositions_87',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],
128 ····['updateprevsteppullcom_88',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],128 ····['updateprevsteppullcom_88',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],
129 ····['updateprobabilityweightsandconvolvedbias_89',·['updateProbabilityWeightsAndConvolvedBias',·['../classgmx_1_1BiasState.xhtml#a9f7401159d5f59b63c09e34829643156',·1,·'gmx::BiasState']]],129 ····['updateprobabilityweightsandconvolvedbias_89',·['updateProbabilityWeightsAndConvolvedBias',·['../classgmx_1_1BiasState.xhtml#a9f7401159d5f59b63c09e34829643156',·1,·'gmx::BiasState']]],
130 ····['updatereferencetemperature_90',·['updatereferencetemperature',·['../classgmx_1_1StatePropagatorData_1_1ReferenceTemperatureHelper.xhtml#af1c1de5aaf87c8f24affe49bde37603b',·1,·'gmx::StatePropagatorData::ReferenceTemperatureHelper::updateReferenceTemperature()'],130 ····['updatereferencetemperature_90',·['updatereferencetemperature',·['../classgmx_1_1StatePropagatorData_1_1ReferenceTemperatureHelper.xhtml#af1c1de5aaf87c8f24affe49bde37603b',·1,·'gmx::StatePropagatorData::ReferenceTemperatureHelper::updateReferenceTemperature()'],
131 ········['../classgmx_1_1NoseHooverGroup.xhtml#aa3d71e0bea4cfdf3b6120a0cb1993acc',·1,·'gmx::NoseHooverGroup::updateReferenceTemperature()'],131 ········['../classgmx_1_1NoseHooverGroup.xhtml#aa3d71e0bea4cfdf3b6120a0cb1993acc',·1,·'gmx::NoseHooverGroup::updateReferenceTemperature()'],
132 ········['../classgmx_1_1StatePropagatorData.xhtml#aee30a9b7c159fb0a9bf500e79c5b36ad',·1,·'gmx::StatePropagatorData::updateReferenceTemperature()']132 ········['../classgmx_1_1StatePropagatorData.xhtml#aee30a9b7c159fb0a9bf500e79c5b36ad',·1,·'gmx::StatePropagatorData::updateReferenceTemperature()']
133 ····]],133 ····]],
134 ····['updatereferencetemperatureandintegral_91',·['updatereferencetemperatureandintegral',·['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a67d316d4990f6b3e3b91d4293102da71',·1,·'gmx::ITemperatureCouplingImpl::updateReferenceTemperatureAndIntegral()'],134 ····['updatereferencetemperatureandintegral_91',·['updatereferencetemperatureandintegral',·['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#a19f20b178c4f10eb2de9ec991438d9f5',·1,·'gmx::NoseHooverTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],
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135 ········['../classgmx_1_1VRescaleTemperatureCoupling.xhtml#ab4efc16ccfe24d5c4a080b6ef9027250',·1,·'gmx::VRescaleTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],136 ········['../classgmx_1_1VRescaleTemperatureCoupling.xhtml#ab4efc16ccfe24d5c4a080b6ef9027250',·1,·'gmx::VRescaleTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],
136 ········['../classgmx_1_1BerendsenTemperatureCoupling.xhtml#ad79e818a438bda7940ddf37e004c8a82',·1,·'gmx::BerendsenTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],137 ········['../classgmx_1_1BerendsenTemperatureCoupling.xhtml#ad79e818a438bda7940ddf37e004c8a82',·1,·'gmx::BerendsenTemperatureCoupling::updateReferenceTemperatureAndIntegral()']
137 ········['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#a19f20b178c4f10eb2de9ec991438d9f5',·1,·'gmx::NoseHooverTemperatureCoupling::updateReferenceTemperatureAndIntegral()'] 
138 ····]],138 ····]],
139 ····['updatesharedcorrelationtensortimeintegral_92',·['updateSharedCorrelationTensorTimeIntegral',·['../classgmx_1_1BiasState.xhtml#ab7dfefc2c90ee279effebe810c485dbc',·1,·'gmx::BiasState']]],139 ····['updatesharedcorrelationtensortimeintegral_92',·['updateSharedCorrelationTensorTimeIntegral',·['../classgmx_1_1BiasState.xhtml#ab7dfefc2c90ee279effebe810c485dbc',·1,·'gmx::BiasState']]],
140 ····['updatetargetweight_93',·['updateTargetWeight',·['../classgmx_1_1PointState.xhtml#a1d57397ae942af129a982a9f333fef51',·1,·'gmx::PointState']]],140 ····['updatetargetweight_93',·['updateTargetWeight',·['../classgmx_1_1PointState.xhtml#a1d57397ae942af129a982a9f333fef51',·1,·'gmx::PointState']]],
141 ····['updatevelocities_94',·['updatevelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx::updateVelocities()'],141 ····['updatevelocities_94',·['updatevelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx::updateVelocities()'],
142 ········['../structgmx_1_1test_1_1anonymous__namespace_02settle_8cpp_03_1_1SettleTestParameters.xhtml#aaaeba6d14001c6c245e8af771389df3c',·1,·'gmx::test::anonymous_namespace{settle.cpp}::SettleTestParameters::updateVelocities']142 ········['../structgmx_1_1test_1_1anonymous__namespace_02settle_8cpp_03_1_1SettleTestParameters.xhtml#aaaeba6d14001c6c245e8af771389df3c',·1,·'gmx::test::anonymous_namespace{settle.cpp}::SettleTestParameters::updateVelocities']
143 ····]],143 ····]],
144 ····['updateweight_95',·['updateWeight',·['../classgmx_1_1BiasParams.xhtml#a0592d5d3d02e79af3d0cd4ee7346a981',·1,·'gmx::BiasParams']]],144 ····['updateweight_95',·['updateWeight',·['../classgmx_1_1BiasParams.xhtml#a0592d5d3d02e79af3d0cd4ee7346a981',·1,·'gmx::BiasParams']]],
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343 ····['adjustatominformation_213',·['adjustAtomInformation',·['../namespacegmx.xhtml#a275fd149ededf268fc7ffaf9c7fd9a8b',·1,·'gmx']]],343 ····['adjustatominformation_213',·['adjustAtomInformation',·['../namespacegmx.xhtml#a275fd149ededf268fc7ffaf9c7fd9a8b',·1,·'gmx']]],
344 ····['adjustfromsettings_214',·['adjustFromSettings',·['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#a5471ae98e9950ceb6cf2ece11ba5c130',·1,·'gmx::CommandLineCommonOptionsHolder']]],344 ····['adjustfromsettings_214',·['adjustFromSettings',·['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#a5471ae98e9950ceb6cf2ece11ba5c130',·1,·'gmx::CommandLineCommonOptionsHolder']]],
345 ····['adjustinputrecbasedonmodules_215',·['adjustInputrecBasedOnModules',·['../classgmx_1_1MDModules.xhtml#a17a16c8f62f862f88627b20f280f740d',·1,·'gmx::MDModules']]],345 ····['adjustinputrecbasedonmodules_215',·['adjustInputrecBasedOnModules',·['../classgmx_1_1MDModules.xhtml#a17a16c8f62f862f88627b20f280f740d',·1,·'gmx::MDModules']]],
346 ····['adjustkeyvaluetreefromoptions_216',·['adjustKeyValueTreeFromOptions',·['../group__module__options.xhtml#ga4ff33b942520181157f23d0204fde157',·1,·'gmx']]],346 ····['adjustkeyvaluetreefromoptions_216',·['adjustKeyValueTreeFromOptions',·['../group__module__options.xhtml#ga4ff33b942520181157f23d0204fde157',·1,·'gmx']]],
347 ····['adl_5fp_217',·['ADL_P',·['../device__management__sycl__intel__device__ids_8cpp.xhtml#a2cbf4ef8d324a75842da95cf157ad662a60e8f3442024c1d700d929d41071f9fa',·1,·'device_management_sycl_intel_device_ids.cpp']]],347 ····['adl_5fp_217',·['ADL_P',·['../device__management__sycl__intel__device__ids_8cpp.xhtml#a2cbf4ef8d324a75842da95cf157ad662a60e8f3442024c1d700d929d41071f9fa',·1,·'device_management_sycl_intel_device_ids.cpp']]],
348 ····['advancepointinsubgrid_218',·['advancePointInSubgrid',·['../namespacegmx.xhtml#a796a4671abfe96e1c695934237ba1af1',·1,·'gmx']]],348 ····['advancepointinsubgrid_218',·['advancePointInSubgrid',·['../namespacegmx.xhtml#a796a4671abfe96e1c695934237ba1af1',·1,·'gmx']]],
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349 ····['affinetransformation_219',·['affinetransformation',·['../classgmx_1_1AffineTransformation.xhtml#a9e6d3f723c477ac3d32c10fda33d0b47',·1,·'gmx::AffineTransformation::AffineTransformation()'],350 ········['../classgmx_1_1AffineTransformation.xhtml#a9e6d3f723c477ac3d32c10fda33d0b47',·1,·'gmx::AffineTransformation::AffineTransformation()']
350 ········['../classgmx_1_1AffineTransformation.xhtml',·1,·'gmx::AffineTransformation'] 
351 ····]],351 ····]],
352 ····['after_20compilation_220',·['Element·tree·after·compilation',·['../page_module_selection_compiler.xhtml#selcompiler_tree',·1,·'']]],352 ····['after_20compilation_220',·['Element·tree·after·compilation',·['../page_module_selection_compiler.xhtml#selcompiler_tree',·1,·'']]],
 353 ····['afterfrom_221',·['afterfrom',·['../classgmx_1_1KeyValueTreeTransformRuleBuilder_1_1AfterFrom.xhtml',·1,·'gmx::KeyValueTreeTransformRuleBuilder::AfterFrom&lt;·FromType·&gt;'],
353 ····['afterfrom_221',·['afterfrom',·['../classgmx_1_1KeyValueTreeTransformRuleBuilder_1_1AfterFrom.xhtml#a2ab97b38dd624b519ab260f18c65f6e6',·1,·'gmx::KeyValueTreeTransformRuleBuilder::AfterFrom::AfterFrom()'],354 ········['../classgmx_1_1KeyValueTreeTransformRuleBuilder_1_1AfterFrom.xhtml#a2ab97b38dd624b519ab260f18c65f6e6',·1,·'gmx::KeyValueTreeTransformRuleBuilder::AfterFrom::AfterFrom()']
354 ········['../classgmx_1_1KeyValueTreeTransformRuleBuilder_1_1AfterFrom.xhtml',·1,·'gmx::KeyValueTreeTransformRuleBuilder::AfterFrom&lt;·FromType·&gt;'] 
355 ····]],355 ····]],
356 ····['against_20tt_20libgromacs_20tt_222',·['Linking·against·&lt;tt&gt;libgromacs&lt;/tt&gt;',·['../page_usinglibrary.xhtml#autotoc_md103',·1,·'']]],356 ····['against_20tt_20libgromacs_20tt_222',·['Linking·against·&lt;tt&gt;libgromacs&lt;/tt&gt;',·['../page_usinglibrary.xhtml#autotoc_md103',·1,·'']]],
357 ····['ai_223',·['ai',·['../classInteractionOfType.xhtml#aea9e0f61528c3026b34a0c304d4a2422',·1,·'InteractionOfType::ai()'], 
358 ········['../structBondedInteraction.xhtml#a39089dc69980e84281a0dc1069a4cd12',·1,·'BondedInteraction::ai()'], 
359 ········['../structMoleculePatch.xhtml#a961bb46d8143f2398991f6575fd74cca',·1,·'MoleculePatch::ai()'],357 ····['ai_223',·['ai',·['../structMoleculePatch.xhtml#a961bb46d8143f2398991f6575fd74cca',·1,·'MoleculePatch::ai()'],
360 ········['../classVsiteBondedInteraction.xhtml#a757d62f6874409547ef7004bb96e0504',·1,·'VsiteBondedInteraction::ai()']358 ········['../classVsiteBondedInteraction.xhtml#a757d62f6874409547ef7004bb96e0504',·1,·'VsiteBondedInteraction::ai()'],
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363 ········['../structMoleculePatch.xhtml#a58d5316b7fb00498ea1e51256b043b1e',·1,·'MoleculePatch::aj()']363 ········['../structMoleculePatch.xhtml#a58d5316b7fb00498ea1e51256b043b1e',·1,·'MoleculePatch::aj()']
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366 ········['../structMoleculePatch.xhtml#aca196338c459bf579c7b9f77c567f17a',·1,·'MoleculePatch::ak()']366 ········['../structMoleculePatch.xhtml#aca196338c459bf579c7b9f77c567f17a',·1,·'MoleculePatch::ak()']
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65 ····['baselatency_27',·['baseLatency',·['../structgmx_1_1HardwareTopology_1_1Numa.xhtml#ae5953a3434aa195be6ec0af0c98461d0',·1,·'gmx::HardwareTopology::Numa']]],65 ····['baselatency_27',·['baseLatency',·['../structgmx_1_1HardwareTopology_1_1Numa.xhtml#ae5953a3434aa195be6ec0af0c98461d0',·1,·'gmx::HardwareTopology::Numa']]],
66 ····['basenetwork_2eh_28',·['basenetwork.h',·['../basenetwork_8h.xhtml',·1,·'']]],66 ····['basenetwork_2eh_28',·['basenetwork.h',·['../basenetwork_8h.xhtml',·1,·'']]],
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68 ····['baseversion_5fgen_2eh_30',·['baseversion_gen.h',·['../baseversion__gen_8h.xhtml',·1,·'']]],68 ····['baseversion_5fgen_2eh_30',·['baseversion_gen.h',·['../baseversion__gen_8h.xhtml',·1,·'']]],
69 ····['basic_31',·['basic',·['../classgmx_1_1HardwareTopology.xhtml#aa94ffc2c936d76ba16f1938f449cfaa8a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::HardwareTopology::Basic'], 
70 ········['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::SelectionCollection::Impl::Basic']69 ····['basic_31',·['basic',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::SelectionCollection::Impl::Basic'],
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73 ········['../classgmx_1_1basic__mdspan.xhtml#ad98e5109d35223338f274e3bdd850622',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m)·noexcept'],78 ········['../classgmx_1_1basic__mdspan.xhtml#ad98e5109d35223338f274e3bdd850622',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m)·noexcept'],
74 ········['../classgmx_1_1basic__mdspan.xhtml#a7c22975cf4760a9f66be3e20d83e1e39',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·std::array&lt;·ptrdiff_t,·extents_type::rank_dynamic()&gt;·&amp;dynamic_extents)'],79 ········['../classgmx_1_1basic__mdspan.xhtml#a7c22975cf4760a9f66be3e20d83e1e39',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·std::array&lt;·ptrdiff_t,·extents_type::rank_dynamic()&gt;·&amp;dynamic_extents)'],
75 ········['../classgmx_1_1basic__mdspan.xhtml#af91e1c5db6aa3eb085defcaf777c6fd3',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·IndexType...·DynamicExtents)·noexcept'], 
76 ········['../classgmx_1_1basic__mdspan.xhtml#a1af35e8aadb8ddbe4a239879e3db6238',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan&lt;·OtherElementType,·OtherExtents,·OtherLayoutPolicy,·OtherAccessor·&gt;·&amp;rhs)·noexcept'],80 ········['../classgmx_1_1basic__mdspan.xhtml#a1af35e8aadb8ddbe4a239879e3db6238',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan&lt;·OtherElementType,·OtherExtents,·OtherLayoutPolicy,·OtherAccessor·&gt;·&amp;rhs)·noexcept'],
 81 ········['../classgmx_1_1basic__mdspan.xhtml#af91e1c5db6aa3eb085defcaf777c6fd3',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·IndexType...·DynamicExtents)·noexcept'],
77 ········['../classgmx_1_1basic__mdspan.xhtml#a869a9eefe1ee5fdbe009f0970533b6c4',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m,·const·accessor_type·&amp;a)·noexcept'], 
78 ········['../classgmx_1_1basic__mdspan.xhtml#aaff0fad86e9316fd92ad9ed713522e62',·1,·'gmx::basic_mdspan::basic_mdspan(U·&amp;&amp;other)'], 
79 ········['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx::basic_mdspan&lt;·ElementType,·Extents,·LayoutPolicy,·AccessorPolicy·&gt;'],82 ········['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx::basic_mdspan&lt;·ElementType,·Extents,·LayoutPolicy,·AccessorPolicy·&gt;']
80 ········['../classgmx_1_1basic__mdspan.xhtml#a3fb425dfe9f5d47d8575a3a5ffe15356',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan·&amp;other)·noexcept=default'], 
81 ········['../classgmx_1_1basic__mdspan.xhtml#aee5fbcbcd53cd39660f4a224aa28055b',·1,·'gmx::basic_mdspan::basic_mdspan(basic_mdspan·&amp;&amp;other)·noexcept=default'], 
82 ········['../classgmx_1_1basic__mdspan.xhtml#a023bf1df41290714a1eb67ee9a952ef0',·1,·'gmx::basic_mdspan::basic_mdspan()·noexcept'] 
83 ····]],83 ····]],
84 ····['basic_5fmdspan_3c_20value_5ftype_2c_20dynamic_5fextents_5ftype_2c_20layout_5fright_20_3e_33',·['basic_mdspan&lt;·value_type,·dynamic_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],84 ····['basic_5fmdspan_3c_20value_5ftype_2c_20dynamic_5fextents_5ftype_2c_20layout_5fright_20_3e_33',·['basic_mdspan&lt;·value_type,·dynamic_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
85 ····['basic_5fmdspan_3c_20value_5ftype_2c_20extents_2c_20layout_5fright_20_3e_34',·['basic_mdspan&lt;·value_type,·Extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],85 ····['basic_5fmdspan_3c_20value_5ftype_2c_20extents_2c_20layout_5fright_20_3e_34',·['basic_mdspan&lt;·value_type,·Extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
86 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_2c_20layout_5fright_20_3e_35',·['basic_mdspan&lt;·value_type,·gmx::extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],86 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_2c_20layout_5fright_20_3e_35',·['basic_mdspan&lt;·value_type,·gmx::extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
87 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_204_2c_203_20_3e_2c_20layout_5fright_20_3e_36',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·4,·3·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],87 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_204_2c_203_20_3e_2c_20layout_5fright_20_3e_36',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·4,·3·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
88 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_20dynamic_5fextent_2c_20dynamic_5fextent_20_3e_2c_20layout_5fright_20_3e_37',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·dynamic_extent,·dynamic_extent·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],88 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_20dynamic_5fextent_2c_20dynamic_5fextent_20_3e_2c_20layout_5fright_20_3e_37',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·dynamic_extent,·dynamic_extent·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
89 ····['basic_5fmdspan_3c_20value_5ftype_2c_20static_5fextents_5ftype_2c_20layout_5fright_20_3e_38',·['basic_mdspan&lt;·value_type,·static_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],89 ····['basic_5fmdspan_3c_20value_5ftype_2c_20static_5fextents_5ftype_2c_20layout_5fright_20_3e_38',·['basic_mdspan&lt;·value_type,·static_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
90 ····['basicaveragehistogrammodule_39',·['basicaveragehistogrammodule',·['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml',·1,·'gmx::internal::BasicAverageHistogramModule'],90 ····['basicaveragehistogrammodule_39',·['basicaveragehistogrammodule',·['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml',·1,·'gmx::internal::BasicAverageHistogramModule'],
91 ········['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml#a54f473e0e65a37bafd96e64187ff3737',·1,·'gmx::internal::BasicAverageHistogramModule::BasicAverageHistogramModule()']91 ········['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml#a54f473e0e65a37bafd96e64187ff3737',·1,·'gmx::internal::BasicAverageHistogramModule::BasicAverageHistogramModule()']
92 ····]],92 ····]],
93 ····['basicaveragehistogrammodulepointer_40',·['BasicAverageHistogramModulePointer',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#a5339c7bb7559827e38bb63f8d824a276',·1,·'gmx::internal::BasicHistogramImpl']]],93 ····['basicaveragehistogrammodulepointer_40',·['BasicAverageHistogramModulePointer',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#a5339c7bb7559827e38bb63f8d824a276',·1,·'gmx::internal::BasicHistogramImpl']]],
94 ····['basichistogramimpl_41',·['basichistogramimpl',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml',·1,·'gmx::internal::BasicHistogramImpl'], 
95 ········['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#acd3fd16453a6ce448dc27f6be4d29c69',·1,·'gmx::internal::BasicHistogramImpl::BasicHistogramImpl()']94 ····['basichistogramimpl_41',·['basichistogramimpl',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#acd3fd16453a6ce448dc27f6be4d29c69',·1,·'gmx::internal::BasicHistogramImpl::BasicHistogramImpl()'],
 95 ········['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml',·1,·'gmx::internal::BasicHistogramImpl']
96 ····]],96 ····]],
97 ····['basicmatrix3x3_42',·['BasicMatrix3x3',·['../namespacegmx.xhtml#a6ec53a17a29b3d233fdfbdc4e273d08d',·1,·'gmx']]],97 ····['basicmatrix3x3_42',·['BasicMatrix3x3',·['../namespacegmx.xhtml#a6ec53a17a29b3d233fdfbdc4e273d08d',·1,·'gmx']]],
98 ····['basicoptions_2ecpp_43',·['basicoptions.cpp',·['../basicoptions_8cpp.xhtml',·1,·'']]],98 ····['basicoptions_2ecpp_43',·['basicoptions.cpp',·['../basicoptions_8cpp.xhtml',·1,·'']]],
99 ····['basicoptions_2eh_44',·['basicoptions.h',·['../basicoptions_8h.xhtml',·1,·'']]],99 ····['basicoptions_2eh_44',·['basicoptions.h',·['../basicoptions_8h.xhtml',·1,·'']]],
100 ····['basicoptionstorage_2eh_45',·['basicoptionstorage.h',·['../basicoptionstorage_8h.xhtml',·1,·'']]],100 ····['basicoptionstorage_2eh_45',·['basicoptionstorage.h',·['../basicoptionstorage_8h.xhtml',·1,·'']]],
101 ····['basictest_46',·['basicTest',·['../classgmx_1_1test_1_1TrajectoryFrameWriterTest.xhtml#af60c02f3ca19494613898ebe603da1b0',·1,·'gmx::test::TrajectoryFrameWriterTest']]],101 ····['basictest_46',·['basicTest',·['../classgmx_1_1test_1_1TrajectoryFrameWriterTest.xhtml#af60c02f3ca19494613898ebe603da1b0',·1,·'gmx::test::TrajectoryFrameWriterTest']]],
102 ····['basicvector_47',·['basicvector',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx::BasicVector&lt;·ValueType·&gt;'], 
103 ········['../classgmx_1_1BasicVector.xhtml#a69359bc6b4f977a9e8f4dc671850fa36',·1,·'gmx::BasicVector::BasicVector(const·RawArray·x)'],102 ····['basicvector_47',·['basicvector',·['../classgmx_1_1BasicVector.xhtml#a69359bc6b4f977a9e8f4dc671850fa36',·1,·'gmx::BasicVector::BasicVector(const·RawArray·x)'],
104 ········['../classgmx_1_1BasicVector.xhtml#a0770c51feab30c509deb6d9596222fb5',·1,·'gmx::BasicVector::BasicVector()'],103 ········['../classgmx_1_1BasicVector.xhtml#a0770c51feab30c509deb6d9596222fb5',·1,·'gmx::BasicVector::BasicVector()'],
105 ········['../classgmx_1_1BasicVector.xhtml#a35f9473fbd9dbc5122c077913b768309',·1,·'gmx::BasicVector::BasicVector(ValueType·x,·ValueType·y,·ValueType·z)'],104 ········['../classgmx_1_1BasicVector.xhtml#a35f9473fbd9dbc5122c077913b768309',·1,·'gmx::BasicVector::BasicVector(ValueType·x,·ValueType·y,·ValueType·z)'],
106 ········['../classgmx_1_1BasicVector.xhtml#a9fc3a859d4ec7431af1481d2b4f4dfe9',·1,·'gmx::BasicVector::BasicVector(const·BasicVector·&amp;src)=default'],105 ········['../classgmx_1_1BasicVector.xhtml',·1,·'gmx::BasicVector&lt;·ValueType·&gt;'],
107 ········['../classgmx_1_1BasicVector.xhtml#a1e948305d75e44763895cb2798d8a8c1',·1,·'gmx::BasicVector::BasicVector(BasicVector·&amp;&amp;src)·noexcept=default']106 ········['../classgmx_1_1BasicVector.xhtml#a1e948305d75e44763895cb2798d8a8c1',·1,·'gmx::BasicVector::BasicVector(BasicVector·&amp;&amp;src)·noexcept=default'],
 107 ········['../classgmx_1_1BasicVector.xhtml#a9fc3a859d4ec7431af1481d2b4f4dfe9',·1,·'gmx::BasicVector::BasicVector(const·BasicVector·&amp;src)=default']
108 ····]],108 ····]],
109 ····['basicvector_3c_20double_20_3e_48',·['BasicVector&lt;·double·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],109 ····['basicvector_3c_20double_20_3e_48',·['BasicVector&lt;·double·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],
110 ····['basicvector_3c_20int_20_3e_49',·['BasicVector&lt;·int·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],110 ····['basicvector_3c_20int_20_3e_49',·['BasicVector&lt;·int·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],
111 ····['basicvector_3c_20real_20_3e_50',·['BasicVector&lt;·real·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],111 ····['basicvector_3c_20real_20_3e_50',·['BasicVector&lt;·real·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],
112 ····['bauto_51',·['bAuto',·['../structUmbrellaOptions.xhtml#a495f27b8e9cfb0ac6aa0c5a650eb54a6',·1,·'UmbrellaOptions']]],112 ····['bauto_51',·['bAuto',·['../structUmbrellaOptions.xhtml#a495f27b8e9cfb0ac6aa0c5a650eb54a6',·1,·'UmbrellaOptions']]],
113 ····['bb_52',·['bb',·['../structgmx_1_1NbnxmPairlistCpuWork_1_1IClusterData.xhtml#a35b8fb203eeea712d485996bfd285185',·1,·'gmx::NbnxmPairlistCpuWork::IClusterData']]],113 ····['bb_52',·['bb',·['../structgmx_1_1NbnxmPairlistCpuWork_1_1IClusterData.xhtml#a35b8fb203eeea712d485996bfd285185',·1,·'gmx::NbnxmPairlistCpuWork::IClusterData']]],
114 ····['bboolno_53',·['bBoolNo',·['../structgmx__sel__lexer__t.xhtml#a51c1565a9c7e67f715d28109b6a91489',·1,·'gmx_sel_lexer_t']]],114 ····['bboolno_53',·['bBoolNo',·['../structgmx__sel__lexer__t.xhtml#a51c1565a9c7e67f715d28109b6a91489',·1,·'gmx_sel_lexer_t']]],
Offset 128, 29 lines modifiedOffset 128, 29 lines modified
128 ····['bcycl_67',·['bCycl',·['../structUmbrellaOptions.xhtml#a1f8b14c587e7cce219441aac02aa5f66',·1,·'UmbrellaOptions']]],128 ····['bcycl_67',·['bCycl',·['../structUmbrellaOptions.xhtml#a1f8b14c587e7cce219441aac02aa5f66',·1,·'UmbrellaOptions']]],
129 ····['bdataproperty_5f_68',·['bDataProperty_',·['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#a12b9fab82a72fdb6d521944c6fab4eab',·1,·'gmx::AnalysisDataModuleManager::Impl']]],129 ····['bdataproperty_5f_68',·['bDataProperty_',·['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#a12b9fab82a72fdb6d521944c6fab4eab',·1,·'gmx::AnalysisDataModuleManager::Impl']]],
130 ····['bdebugmode_69',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]],130 ····['bdebugmode_69',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]],
131 ····['bdiscrete_70',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]],131 ····['bdiscrete_70',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]],
132 ····['bdotime_71',·['bDoTime',·['../structgmx_1_1NbnxmGpu.xhtml#a3d617d678246cce64ceda64d6358cc0c',·1,·'gmx::NbnxmGpu']]],132 ····['bdotime_71',·['bDoTime',·['../structgmx_1_1NbnxmGpu.xhtml#a3d617d678246cce64ceda64d6358cc0c',·1,·'gmx::NbnxmGpu']]],
133 ····['bdynamicbox_72',·['bDynamicBox',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#afaf048710cbf2887f36a734d8707078f',·1,·'gmx::nbnxn_atomdata_t']]],133 ····['bdynamicbox_72',·['bDynamicBox',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#afaf048710cbf2887f36a734d8707078f',·1,·'gmx::nbnxn_atomdata_t']]],
134 ····['becool_73',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]],134 ····['becool_73',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]],
135 ····['begin_74',·['begin',·['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'], 
136 ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'], 
137 ········['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'], 
138 ········['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'],135 ····['begin_74',·['begin',·['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'],
139 ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()'], 
140 ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],136 ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],
141 ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],137 ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],
142 ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin(const·BasicMdspan·&amp;basicMdspan)'],138 ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin(const·BasicMdspan·&amp;basicMdspan)'],
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143 ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'],141 ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'],
144 ········['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()·noexcept'], 
145 ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()·const·noexcept'], 
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148 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'],143 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'],
149 ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()']144 ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'],
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 148 ········['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()·noexcept'],
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150 ····]],150 ····]],
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152 ····['beginiterator_76',·['beginIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a6301d2be458f368de68f404d9dff17f7',·1,·'gmx::SelectionParserSymbolTable']]],152 ····['beginiterator_76',·['beginIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a6301d2be458f368de68f404d9dff17f7',·1,·'gmx::SelectionParserSymbolTable']]],
153 ····['behaviorcollection_2ecpp_77',·['behaviorcollection.cpp',·['../behaviorcollection_8cpp.xhtml',·1,·'']]],153 ····['behaviorcollection_2ecpp_77',·['behaviorcollection.cpp',·['../behaviorcollection_8cpp.xhtml',·1,·'']]],
154 ····['behaviorcollection_2eh_78',·['behaviorcollection.h',·['../behaviorcollection_8h.xhtml',·1,·'']]],154 ····['behaviorcollection_2eh_78',·['behaviorcollection.h',·['../behaviorcollection_8h.xhtml',·1,·'']]],
155 ····['bench_79',·['bench',·['../namespacegmx.xhtml#a7b53184fadd094f5c7ac05ba75d70cef',·1,·'gmx']]],155 ····['bench_79',·['bench',·['../namespacegmx.xhtml#a7b53184fadd094f5c7ac05ba75d70cef',·1,·'gmx']]],
156 ····['bench_5fcoords_2eh_80',·['bench_coords.h',·['../bench__coords_8h.xhtml',·1,·'']]],156 ····['bench_5fcoords_2eh_80',·['bench_coords.h',·['../bench__coords_8h.xhtml',·1,·'']]],
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182 ····['bgeneratehh14interactions_102',·['bGenerateHH14Interactions',·['../structPreprocessResidue.xhtml#a7ef40e3704969bcd360c3d5d94ee264b',·1,·'PreprocessResidue']]],182 ····['bgeneratehh14interactions_102',·['bGenerateHH14Interactions',·['../structPreprocessResidue.xhtml#a7ef40e3704969bcd360c3d5d94ee264b',·1,·'PreprocessResidue']]],
183 ····['bgroups_103',·['bGroups',·['../structgmx__sel__lexer__t.xhtml#a5bf6b14ef14775f440cd6a150acf22b0',·1,·'gmx_sel_lexer_t']]],183 ····['bgroups_103',·['bGroups',·['../structgmx__sel__lexer__t.xhtml#a5bf6b14ef14775f440cd6a150acf22b0',·1,·'gmx_sel_lexer_t']]],
184 ····['bharmonic_104',·['bHarmonic',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edflood.xhtml#ad3c168d4052e3bc5a77dea8ff3a877fe',·1,·'anonymous_namespace{edsam.cpp}::t_edflood']]],184 ····['bharmonic_104',·['bHarmonic',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edflood.xhtml#ad3c168d4052e3bc5a77dea8ff3a877fe',·1,·'anonymous_namespace{edsam.cpp}::t_edflood']]],
185 ····['bhelix_105',·['bHelix',·['../structt__bb.xhtml#a48c50f40d59ad266202feb100567d843',·1,·'t_bb']]],185 ····['bhelix_105',·['bHelix',·['../structt__bb.xhtml#a48c50f40d59ad266202feb100567d843',·1,·'t_bb']]],
186 ····['bhidden_5f_106',·['bHidden_',·['../classgmx_1_1CommandLineHelpContext_1_1Impl.xhtml#a1a012091fc0390f509fcc3c55bd97092',·1,·'gmx::CommandLineHelpContext::Impl']]],186 ····['bhidden_5f_106',·['bHidden_',·['../classgmx_1_1CommandLineHelpContext_1_1Impl.xhtml#a1a012091fc0390f509fcc3c55bd97092',·1,·'gmx::CommandLineHelpContext::Impl']]],
187 ····['bhistonly_107',·['bHistOnly',·['../structUmbrellaOptions.xhtml#acdf67a7adadf17543b0433c028aa387a',·1,·'UmbrellaOptions']]],187 ····['bhistonly_107',·['bHistOnly',·['../structUmbrellaOptions.xhtml#acdf67a7adadf17543b0433c028aa387a',·1,·'UmbrellaOptions']]],
188 ····['bhost_5funused_108',·['bhost_UNUSED',·['../structCheckpointHeaderContents.xhtml#aef8c2b80e340df183cde5c1946fc64e5',·1,·'CheckpointHeaderContents']]],188 ····['bhost_5funused_108',·['bhost_UNUSED',·['../structCheckpointHeaderContents.xhtml#aef8c2b80e340df183cde5c1946fc64e5',·1,·'CheckpointHeaderContents']]],
189 ····['bias_109',·['bias',·['../classgmx_1_1PointState.xhtml#a051fc887a154fd8e8429f772006ff597',·1,·'gmx::PointState::bias()'],189 ····['bias_109',·['bias',·['../classgmx_1_1Bias.xhtml#a6ea05d388c5983d92b1e4f9216ec3c07',·1,·'gmx::Bias::Bias()'],
 190 ········['../classgmx_1_1Bias.xhtml',·1,·'gmx::Bias'],
190 ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344a4ad6b9e6418fd2d739906bd47e887ae3',·1,·'gmx::Bias'],191 ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344a4ad6b9e6418fd2d739906bd47e887ae3',·1,·'gmx::Bias'],
 192 ········['../classgmx_1_1PointState.xhtml#a051fc887a154fd8e8429f772006ff597',·1,·'gmx::PointState::bias()']
191 ········['../classgmx_1_1Bias.xhtml#a6ea05d388c5983d92b1e4f9216ec3c07',·1,·'gmx::Bias::Bias()'], 
192 ········['../classgmx_1_1Bias.xhtml',·1,·'gmx::Bias'] 
193 ····]],193 ····]],
194 ····['bias_2ecpp_110',·['bias.cpp',·['../bias_8cpp.xhtml',·1,·'']]],194 ····['bias_2ecpp_110',·['bias.cpp',·['../bias_8cpp.xhtml',·1,·'']]],
195 ····['bias_2eh_111',·['bias.h',·['../bias_8h.xhtml',·1,·'']]],195 ····['bias_2eh_111',·['bias.h',·['../bias_8h.xhtml',·1,·'']]],
196 ····['bias_5f_112',·['bias_',·['../structgmx_1_1BiasCoupledToSystem.xhtml#a915eb82b66d861dd5377036383b654f0',·1,·'gmx::BiasCoupledToSystem::bias_'],196 ····['bias_5f_112',·['bias_',·['../structgmx_1_1BiasCoupledToSystem.xhtml#a915eb82b66d861dd5377036383b654f0',·1,·'gmx::BiasCoupledToSystem::bias_'],
197 ········['../classgmx_1_1test_1_1BiasTest.xhtml#af4806c866b09dce06db386eb0dcea407',·1,·'gmx::test::BiasTest::bias_'],197 ········['../classgmx_1_1test_1_1BiasTest.xhtml#af4806c866b09dce06db386eb0dcea407',·1,·'gmx::test::BiasTest::bias_'],
198 ········['../classgmx_1_1test_1_1BiasFepLambdaStateTest.xhtml#ae7e39eda7a77d998b80c658f65fb9074',·1,·'gmx::test::BiasFepLambdaStateTest::bias_']198 ········['../classgmx_1_1test_1_1BiasFepLambdaStateTest.xhtml#ae7e39eda7a77d998b80c658f65fb9074',·1,·'gmx::test::BiasFepLambdaStateTest::bias_']
199 ····]],199 ····]],
200 ····['biascorrectedaverage_113',·['biasCorrectedAverage',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a83f79db8f50129497cc5349b972ecabb',·1,·'gmx::ExponentialMovingAverage']]],200 ····['biascorrectedaverage_113',·['biasCorrectedAverage',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a83f79db8f50129497cc5349b972ecabb',·1,·'gmx::ExponentialMovingAverage']]],
201 ····['biascoupledtosystem_114',·['biascoupledtosystem',·['../structgmx_1_1BiasCoupledToSystem.xhtml',·1,·'gmx::BiasCoupledToSystem'], 
202 ········['../structgmx_1_1BiasCoupledToSystem.xhtml#a0d55bb29484a8c71778a4bf70a3ddfd0',·1,·'gmx::BiasCoupledToSystem::BiasCoupledToSystem()']201 ····['biascoupledtosystem_114',·['biascoupledtosystem',·['../structgmx_1_1BiasCoupledToSystem.xhtml#a0d55bb29484a8c71778a4bf70a3ddfd0',·1,·'gmx::BiasCoupledToSystem::BiasCoupledToSystem()'],
 202 ········['../structgmx_1_1BiasCoupledToSystem.xhtml',·1,·'gmx::BiasCoupledToSystem']
203 ····]],203 ····]],
204 ····['biasedlogweightfrompoint_115',·['biasedLogWeightFromPoint',·['../namespacegmx_1_1anonymous__namespace_02biasstate_8cpp_03.xhtml#a154728ee54b770144eeaee8650142f3f',·1,·'gmx::anonymous_namespace{biasstate.cpp}']]],204 ····['biasedlogweightfrompoint_115',·['biasedLogWeightFromPoint',·['../namespacegmx_1_1anonymous__namespace_02biasstate_8cpp_03.xhtml#a154728ee54b770144eeaee8650142f3f',·1,·'gmx::anonymous_namespace{biasstate.cpp}']]],
205 ····['biasesarecompatibleforsharingbetweensimulations_116',·['biasesAreCompatibleForSharingBetweenSimulations',·['../namespacegmx.xhtml#a161ff1b8f4e89a7136264bf0130c8627',·1,·'gmx']]],205 ····['biasesarecompatibleforsharingbetweensimulations_116',·['biasesAreCompatibleForSharingBetweenSimulations',·['../namespacegmx.xhtml#a161ff1b8f4e89a7136264bf0130c8627',·1,·'gmx']]],
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167 ····['c_5fnvshmemthreadsperblock_132',·['c_nvshmemThreadsPerBlock',·['../structgmx_1_1nvshmemHaloExchangeOps.xhtml#a22e6540428666f369082aa85111f0114',·1,·'gmx::nvshmemHaloExchangeOps']]],167 ····['c_5fnvshmemthreadsperblock_132',·['c_nvshmemThreadsPerBlock',·['../structgmx_1_1nvshmemHaloExchangeOps.xhtml#a22e6540428666f369082aa85111f0114',·1,·'gmx::nvshmemHaloExchangeOps']]],
168 ····['c_5foldestsupportedmagicnumber_133',·['c_oldestSupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#afb8f8255516cbf4c08e51ee7cface65b',·1,·'anonymous_namespace{edsam.cpp}']]],168 ····['c_5foldestsupportedmagicnumber_133',·['c_oldestSupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#afb8f8255516cbf4c08e51ee7cface65b',·1,·'anonymous_namespace{edsam.cpp}']]],
169 ····['c_5foldestunsupportedmagicnumber_134',·['c_oldestUnsupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a3d1dc11b4252282579382b89abd9d815',·1,·'anonymous_namespace{edsam.cpp}']]],169 ····['c_5foldestunsupportedmagicnumber_134',·['c_oldestUnsupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a3d1dc11b4252282579382b89abd9d815',·1,·'anonymous_namespace{edsam.cpp}']]],
170 ····['c_5foptions_135',·['c_options',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a1555a48dc2e0847fe505724fda04fc66',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],170 ····['c_5foptions_135',·['c_options',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a1555a48dc2e0847fe505724fda04fc66',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],
171 ····['c_5fpackx4_136',·['c_packX4',·['../namespacegmx.xhtml#ac45b5012104199741d668a224b136db1',·1,·'gmx']]],171 ····['c_5fpackx4_136',·['c_packX4',·['../namespacegmx.xhtml#ac45b5012104199741d668a224b136db1',·1,·'gmx']]],
172 ····['c_5fpackx8_137',·['c_packX8',·['../namespacegmx.xhtml#aeed0b85513edbdaa3190b188faa6aede',·1,·'gmx']]],172 ····['c_5fpackx8_137',·['c_packX8',·['../namespacegmx.xhtml#aeed0b85513edbdaa3190b188faa6aede',·1,·'gmx']]],
173 ····['c_5fpbcfortests_138',·['c_pbcfortests',·['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a3f98f7220875de5238f25cb8ef1a380e',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}::c_pbcForTests'],173 ····['c_5fpbcfortests_138',·['c_pbcfortests',·['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a8716925dfcab1e34ee190aa91b188f0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_pbcForTests'],
174 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a4e60b5e4d9d4e96d420da062cdd7136f',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_pbcForTests'],174 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a4e60b5e4d9d4e96d420da062cdd7136f',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_pbcForTests'],
175 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a8716925dfcab1e34ee190aa91b188f0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_pbcForTests']175 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a3f98f7220875de5238f25cb8ef1a380e',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}::c_pbcForTests']
176 ····]],176 ····]],
177 ····['c_5fpbctypenames_139',·['c_pbcTypeNames',·['../pbc_8cpp.xhtml#a7be910db7d0fa30ca5568f9cbc332ee9',·1,·'pbc.cpp']]],177 ····['c_5fpbctypenames_139',·['c_pbcTypeNames',·['../pbc_8cpp.xhtml#a7be910db7d0fa30ca5568f9cbc332ee9',·1,·'pbc.cpp']]],
178 ····['c_5fpdbatomstypenames_140',·['c_pdbAtomsTypeNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#a04755ce557be547fa02a3bd3486e70f5',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]],178 ····['c_5fpdbatomstypenames_140',·['c_pdbAtomsTypeNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#a04755ce557be547fa02a3bd3486e70f5',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]],
179 ····['c_5fpmeatomdatablocksize_141',·['c_pmeAtomDataBlockSize',·['../pme__gpu__internal_8cpp.xhtml#a9751dab48d98743b36ad4d6eee89aab6',·1,·'pme_gpu_internal.cpp']]],179 ····['c_5fpmeatomdatablocksize_141',·['c_pmeAtomDataBlockSize',·['../pme__gpu__internal_8cpp.xhtml#a9751dab48d98743b36ad4d6eee89aab6',·1,·'pme_gpu_internal.cpp']]],
180 ····['c_5fpmegpuorder_142',·['c_pmeGpuOrder',·['../pme__gpu__constants_8h.xhtml#a8027cdc3ec057297fa567378562d892e',·1,·'pme_gpu_constants.h']]],180 ····['c_5fpmegpuorder_142',·['c_pmeGpuOrder',·['../pme__gpu__constants_8h.xhtml#a8027cdc3ec057297fa567378562d892e',·1,·'pme_gpu_constants.h']]],
181 ····['c_5fppstretchesnames_143',·['c_PPStretchesNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03.xhtml#acd7005765b5321aa2e84a1efa94e4804',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}']]],181 ····['c_5fppstretchesnames_143',·['c_PPStretchesNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03.xhtml#acd7005765b5321aa2e84a1efa94e4804',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}']]],
182 ····['c_5fprecisiontolerance_144',·['c_precisionTolerance',·['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a0f59870a0c42c6116a428c706af0d0e7',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}']]],182 ····['c_5fprecisiontolerance_144',·['c_precisionTolerance',·['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a0f59870a0c42c6116a428c706af0d0e7',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}']]],
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227 ····['c_5ftrimsize_185',·['c_trimSize',·['../symtab_8cpp.xhtml#a74545f5cb6cc89f617f17fc2ec35485c',·1,·'symtab.cpp']]],227 ····['c_5ftrimsize_185',·['c_trimSize',·['../symtab_8cpp.xhtml#a74545f5cb6cc89f617f17fc2ec35485c',·1,·'symtab.cpp']]],
228 ····['c_5funknown_186',·['c_unknown',·['../namespaceanonymous__namespace_02sysinfo_8cpp_03.xhtml#ad4a20f207d75277ec8c8f9d8cef88fd3',·1,·'anonymous_namespace{sysinfo.cpp}']]],228 ····['c_5funknown_186',·['c_unknown',·['../namespaceanonymous__namespace_02sysinfo_8cpp_03.xhtml#ad4a20f207d75277ec8c8f9d8cef88fd3',·1,·'anonymous_namespace{sysinfo.cpp}']]],
229 ····['c_5fusedelayedwait_187',·['c_useDelayedWait',·['../pme__pp_8cpp.xhtml#a2e369172045aa7262c8f217f3eb9c35a',·1,·'pme_pp.cpp']]],229 ····['c_5fusedelayedwait_187',·['c_useDelayedWait',·['../pme__pp_8cpp.xhtml#a2e369172045aa7262c8f217f3eb9c35a',·1,·'pme_pp.cpp']]],
230 ····['c_5fversiondeclarationstring_188',·['c_VersionDeclarationString',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata__xml_8cpp_03.xhtml#a1339168f3e2f4e9e7ef6d237af203de5',·1,·'gmx::test::anonymous_namespace{refdata_xml.cpp}']]],230 ····['c_5fversiondeclarationstring_188',·['c_VersionDeclarationString',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata__xml_8cpp_03.xhtml#a1339168f3e2f4e9e7ef6d237af203de5',·1,·'gmx::test::anonymous_namespace{refdata_xml.cpp}']]],
231 ····['c_5fvirialandenergycount_189',·['c_virialAndEnergyCount',·['../pme__gpu__constants_8h.xhtml#ae4da821cb02bbd25f4258668abf9996c',·1,·'pme_gpu_constants.h']]],231 ····['c_5fvirialandenergycount_189',·['c_virialAndEnergyCount',·['../pme__gpu__constants_8h.xhtml#ae4da821cb02bbd25f4258668abf9996c',·1,·'pme_gpu_constants.h']]],
232 ····['c_5fwaterpositions_190',·['c_waterPositions',·['../namespacegmx_1_1test.xhtml#a9329c087051c3222ed27a5029278ac90',·1,·'gmx::test']]],232 ····['c_5fwaterpositions_190',·['c_waterPositions',·['../namespacegmx_1_1test.xhtml#a9329c087051c3222ed27a5029278ac90',·1,·'gmx::test']]],
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233 ····['c_5fxvgformatnames_191',·['c_xvgformatnames',·['../namespacegmx_1_1anonymous__namespace_02pargs_8cpp_03.xhtml#afe48c42da00d80d1811918be03801c87',·1,·'gmx::anonymous_namespace{pargs.cpp}::c_xvgFormatNames'],234 ········['../namespacegmx_1_1anonymous__namespace_02pargs_8cpp_03.xhtml#afe48c42da00d80d1811918be03801c87',·1,·'gmx::anonymous_namespace{pargs.cpp}::c_xvgFormatNames']
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236 ····['ca_192',·['CA',·['../structt__bb.xhtml#aabd0ee2d5ea08bc62412d45cdf0f1861',·1,·'t_bb']]],236 ····['ca_192',·['CA',·['../structt__bb.xhtml#aabd0ee2d5ea08bc62412d45cdf0f1861',·1,·'t_bb']]],
237 ····['cacceleration_5f_193',·['cAcceleration_',·['../classUpdate_1_1Impl.xhtml#a2ea432dff674fba9ed4e774ca65e65d6',·1,·'Update::Impl']]],237 ····['cacceleration_5f_193',·['cAcceleration_',·['../classUpdate_1_1Impl.xhtml#a2ea432dff674fba9ed4e774ca65e65d6',·1,·'Update::Impl']]],
238 ····['cache_194',·['Cache',·['../structgmx_1_1HardwareTopology_1_1Cache.xhtml',·1,·'gmx::HardwareTopology']]],238 ····['cache_194',·['Cache',·['../structgmx_1_1HardwareTopology_1_1Cache.xhtml',·1,·'gmx::HardwareTopology']]],
239 ····['cachelinealignedflag_195',·['cachelinealignedflag',·['../namespacegmx.xhtml#a2646bbaac4cce11ceca6af4a76bf2754',·1,·'gmx::CacheLineAlignedFlag'],239 ····['cachelinealignedflag_195',·['cachelinealignedflag',·['../namespacegmx.xhtml#a2646bbaac4cce11ceca6af4a76bf2754',·1,·'gmx::CacheLineAlignedFlag'],
240 ········['../structgmx_1_1CacheLineAlignedFlag.xhtml',·1,·'gmx::CacheLineAlignedFlag']240 ········['../structgmx_1_1CacheLineAlignedFlag.xhtml',·1,·'gmx::CacheLineAlignedFlag']
241 ····]],241 ····]],
Offset 843, 74 lines modifiedOffset 843, 74 lines modified
843 ····['clearforcebuffer_579',·['clearForceBuffer',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#acc5555d90dbd4b2a4278c021e7440816',·1,·'gmx::nbnxn_atomdata_t']]],843 ····['clearforcebuffer_579',·['clearForceBuffer',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#acc5555d90dbd4b2a4278c021e7440816',·1,·'gmx::nbnxn_atomdata_t']]],
844 ····['clearforcesandenergies_580',·['clearForcesAndEnergies',·['../classgmx_1_1ThreadForceBuffer.xhtml#a65135f9bec3493a91559e782add03f82',·1,·'gmx::ThreadForceBuffer']]],844 ····['clearforcesandenergies_580',·['clearForcesAndEnergies',·['../classgmx_1_1ThreadForceBuffer.xhtml#a65135f9bec3493a91559e782add03f82',·1,·'gmx::ThreadForceBuffer']]],
845 ····['clearframe_581',·['clearFrame',·['../classgmx_1_1internal_1_1AnalysisDataStorageFrameData.xhtml#a48fe32216f9402146ba0a12097600e60',·1,·'gmx::internal::AnalysisDataStorageFrameData']]],845 ····['clearframe_581',·['clearFrame',·['../classgmx_1_1internal_1_1AnalysisDataStorageFrameData.xhtml#a48fe32216f9402146ba0a12097600e60',·1,·'gmx::internal::AnalysisDataStorageFrameData']]],
846 ····['cleargpufbufferearly_582',·['clearGpuFBufferEarly',·['../classgmx_1_1StepWorkload.xhtml#ad36a110e9c4e372e01c7baf852c91c48',·1,·'gmx::StepWorkload']]],846 ····['cleargpufbufferearly_582',·['clearGpuFBufferEarly',·['../classgmx_1_1StepWorkload.xhtml#ad36a110e9c4e372e01c7baf852c91c48',·1,·'gmx::StepWorkload']]],
847 ····['clearhist_583',·['clearHist',·['../classgmx_1_1ComputeDebyeScattering.xhtml#a56ae99df71bb6a2c58d38e2192a77a81',·1,·'gmx::ComputeDebyeScattering']]],847 ····['clearhist_583',·['clearHist',·['../classgmx_1_1ComputeDebyeScattering.xhtml#a56ae99df71bb6a2c58d38e2192a77a81',·1,·'gmx::ComputeDebyeScattering']]],
848 ····['clearifneeded_584',·['clearIfNeeded',·['../classChainIdFiller.xhtml#a751d1d8479b26c11d20c4085a0981121',·1,·'ChainIdFiller']]],848 ····['clearifneeded_584',·['clearIfNeeded',·['../classChainIdFiller.xhtml#a751d1d8479b26c11d20c4085a0981121',·1,·'ChainIdFiller']]],
849 ····['clearmodificationblock_585',·['clearModificationBlock',·['../hackblock_8h.xhtml#aebf7055bd2787b678b68cd10b985e280',·1,·'hackblock.cpp']]],849 ····['clearmodificationblock_585',·['clearModificationBlock',·['../hackblock_8h.xhtml#aebf7055bd2787b678b68cd10b985e280',·1,·'hackblock.cpp']]],
850 ····['clearset_586',·['clearset',·['../classgmx_1_1OptionStorageTemplate.xhtml#aacee4c66708e962661689f08a462739a',·1,·'gmx::OptionStorageTemplate::clearSet()'], 
851 ········['../classgmx_1_1AbstractOptionStorage.xhtml#a3777ada9336d3fd52068a9929b6fb3b8',·1,·'gmx::AbstractOptionStorage::clearSet()']850 ····['clearset_586',·['clearset',·['../classgmx_1_1AbstractOptionStorage.xhtml#a3777ada9336d3fd52068a9929b6fb3b8',·1,·'gmx::AbstractOptionStorage::clearSet()'],
 851 ········['../classgmx_1_1OptionStorageTemplate.xhtml#aacee4c66708e962661689f08a462739a',·1,·'gmx::OptionStorageTemplate::clearSet()']
852 ····]],852 ····]],
853 ····['clearsymboltable_587',·['clearSymbolTable',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#ab674dda1a30837dcbacb7a043f339a19',·1,·'gmx::SelectionCollection::Impl']]],853 ····['clearsymboltable_587',·['clearSymbolTable',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#ab674dda1a30837dcbacb7a043f339a19',·1,·'gmx::SelectionCollection::Impl']]],
854 ····['cleartaskforcebufferusedelements_588',·['clearTaskForceBufferUsedElements',·['../namespacegmx.xhtml#a9c65d4e61132e4ba154b1b1e8d772483',·1,·'gmx']]],854 ····['cleartaskforcebufferusedelements_588',·['clearTaskForceBufferUsedElements',·['../namespacegmx.xhtml#a9c65d4e61132e4ba154b1b1e8d772483',·1,·'gmx']]],
855 ····['clfftinitializer_589',·['clfftinitializer',·['../classgmx_1_1ClfftInitializer.xhtml',·1,·'gmx::ClfftInitializer'], 
856 ········['../classgmx_1_1ClfftInitializer.xhtml#a8e52d5eb9696dbfff76e6bdc9d56353b',·1,·'gmx::ClfftInitializer::ClfftInitializer()']855 ····['clfftinitializer_589',·['clfftinitializer',·['../classgmx_1_1ClfftInitializer.xhtml#a8e52d5eb9696dbfff76e6bdc9d56353b',·1,·'gmx::ClfftInitializer::ClfftInitializer()'],
 856 ········['../classgmx_1_1ClfftInitializer.xhtml',·1,·'gmx::ClfftInitializer']
857 ····]],857 ····]],
858 ····['clfftinitializer_2ecpp_590',·['clfftinitializer.cpp',·['../clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)'],858 ····['clfftinitializer_2ecpp_590',·['clfftinitializer.cpp',·['../tests_2clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)'],
859 ········['../tests_2clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)']859 ········['../clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)']
860 ····]],860 ····]],
861 ····['clfftinitializer_2eh_591',·['clfftinitializer.h',·['../clfftinitializer_8h.xhtml',·1,·'']]],861 ····['clfftinitializer_2eh_591',·['clfftinitializer.h',·['../clfftinitializer_8h.xhtml',·1,·'']]],
862 ····['clhandle_592',·['clhandle',·['../classgmx_1_1ClHandle.xhtml#a506140fa32d43652bcffc0dc2f95c366',·1,·'gmx::ClHandle::ClHandle()'], 
863 ········['../classgmx_1_1ClHandle.xhtml',·1,·'gmx::ClHandle&lt;·cl_type·&gt;'],862 ····['clhandle_592',·['clhandle',·['../classgmx_1_1ClHandle.xhtml',·1,·'gmx::ClHandle&lt;·cl_type·&gt;'],
864 ········['../classgmx_1_1ClHandle.xhtml#a27f1a3d671ccf77c8c5c724d2c38d0db',·1,·'gmx::ClHandle::ClHandle(cl_type·handle)'],863 ········['../classgmx_1_1ClHandle.xhtml#a506140fa32d43652bcffc0dc2f95c366',·1,·'gmx::ClHandle::ClHandle(ClHandle·&amp;&amp;)·noexcept=default'],
 864 ········['../classgmx_1_1ClHandle.xhtml#a2dce49849ee0051ee05990c651f0b56a',·1,·'gmx::ClHandle::ClHandle(const·ClHandle·&amp;)=delete'],
865 ········['../classgmx_1_1ClHandle.xhtml#afa26827973b650e659cec6b3fdb90a1c',·1,·'gmx::ClHandle::ClHandle()=delete'],865 ········['../classgmx_1_1ClHandle.xhtml#afa26827973b650e659cec6b3fdb90a1c',·1,·'gmx::ClHandle::ClHandle()=delete'],
866 ········['../classgmx_1_1ClHandle.xhtml#a2dce49849ee0051ee05990c651f0b56a',·1,·'gmx::ClHandle::ClHandle(const·ClHandle·&amp;)=delete']866 ········['../classgmx_1_1ClHandle.xhtml#a27f1a3d671ccf77c8c5c724d2c38d0db',·1,·'gmx::ClHandle::ClHandle(cl_type·handle)']
867 ····]],867 ····]],
 868 ····['client_593',·['client',·['../classgmx_1_1LastStepSignaller.xhtml#afd9ce82ca570b65800e8847edde18bff',·1,·'gmx::LastStepSignaller::Client'],
868 ····['client_593',·['client',·['../classgmx_1_1LoggingSignaller.xhtml#aaf810ad2f5b09e596a9d2dbb29553125',·1,·'gmx::LoggingSignaller::Client'],869 ········['../classgmx_1_1LoggingSignaller.xhtml#aaf810ad2f5b09e596a9d2dbb29553125',·1,·'gmx::LoggingSignaller::Client'],
869 ········['../classgmx_1_1NeighborSearchSignaller.xhtml#a3252cb8f172a9adbc7ebe9823e354e92',·1,·'gmx::NeighborSearchSignaller::Client'],870 ········['../classgmx_1_1NeighborSearchSignaller.xhtml#a3252cb8f172a9adbc7ebe9823e354e92',·1,·'gmx::NeighborSearchSignaller::Client'],
870 ········['../classgmx_1_1LastStepSignaller.xhtml#afd9ce82ca570b65800e8847edde18bff',·1,·'gmx::LastStepSignaller::Client'], 
871 ········['../classgmx_1_1TrajectorySignaller.xhtml#ae0de88b8aa35e7dbf3b17aade886baef',·1,·'gmx::TrajectorySignaller::Client'],871 ········['../classgmx_1_1TrajectorySignaller.xhtml#ae0de88b8aa35e7dbf3b17aade886baef',·1,·'gmx::TrajectorySignaller::Client'],
872 ········['../classgmx_1_1EnergySignaller.xhtml#a94150f5b1e8c15af92db18487806c6bc',·1,·'gmx::EnergySignaller::Client']872 ········['../classgmx_1_1EnergySignaller.xhtml#a94150f5b1e8c15af92db18487806c6bc',·1,·'gmx::EnergySignaller::Client']
873 ····]],873 ····]],
874 ····['clientid_594',·['clientid',·['../classgmx_1_1EnergyData_1_1Element.xhtml#a7bec0626f7b0334084b1de0d74f017ff',·1,·'gmx::EnergyData::Element::clientID()'],874 ····['clientid_594',·['clientid',·['../classgmx_1_1FirstOrderPressureCoupling.xhtml#ac841a4d173f4113f6a58f7fea81f7623',·1,·'gmx::FirstOrderPressureCoupling::clientID()'],
875 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#ae39efb9474aa97465e44bed1a0c1c262',·1,·'gmx::ExpandedEnsembleElement::clientID()'],875 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#ae39efb9474aa97465e44bed1a0c1c262',·1,·'gmx::ExpandedEnsembleElement::clientID()'],
 876 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#ab5ccd5b17d1db7a544a278e22a18862d',·1,·'gmx::VelocityScalingTemperatureCoupling::clientID()'],
876 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#ac841a4d173f4113f6a58f7fea81f7623',·1,·'gmx::FirstOrderPressureCoupling::clientID()'], 
877 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#afae0a07cbf3e5a2e127b4cbf7b19822a',·1,·'gmx::FreeEnergyPerturbationData::Element::clientID()'], 
878 ········['../group__module__modularsimulator.xhtml#gadab8128d65de85ab9a5be2da01cadfd3',·1,·'gmx::ICheckpointHelperClient::clientID()'], 
879 ········['../classgmx_1_1MttkData.xhtml#a025798d55223c429d122cfc0e4604d3a',·1,·'gmx::MttkData::clientID()'], 
880 ········['../classgmx_1_1NoseHooverChainsData.xhtml#a6231115c2e233938dbe9328cf91e73d2',·1,·'gmx::NoseHooverChainsData::clientID()'], 
881 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#ad8bd318c1b0d38e34c563a9724193353',·1,·'gmx::ParrinelloRahmanBarostat::clientID()'], 
882 ········['../classgmx_1_1PullElement.xhtml#a59eab0b7c64c240c5a3d40b0d0965d8a',·1,·'gmx::PullElement::clientID()'], 
883 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#adcc80949d852ec6d949e909661b4903b',·1,·'gmx::StatePropagatorData::Element::clientID()'],877 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#adcc80949d852ec6d949e909661b4903b',·1,·'gmx::StatePropagatorData::Element::clientID()'],
884 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#ab5ccd5b17d1db7a544a278e22a18862d',·1,·'gmx::VelocityScalingTemperatureCoupling::clientID()']878 ········['../classgmx_1_1PullElement.xhtml#a59eab0b7c64c240c5a3d40b0d0965d8a',·1,·'gmx::PullElement::clientID()'],
 879 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#ad8bd318c1b0d38e34c563a9724193353',·1,·'gmx::ParrinelloRahmanBarostat::clientID()'],
 880 ········['../classgmx_1_1NoseHooverChainsData.xhtml#a6231115c2e233938dbe9328cf91e73d2',·1,·'gmx::NoseHooverChainsData::clientID()'],
 881 ········['../classgmx_1_1MttkData.xhtml#a025798d55223c429d122cfc0e4604d3a',·1,·'gmx::MttkData::clientID()'],
 882 ········['../group__module__modularsimulator.xhtml#gadab8128d65de85ab9a5be2da01cadfd3',·1,·'gmx::ICheckpointHelperClient::clientID()'],
 883 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#afae0a07cbf3e5a2e127b4cbf7b19822a',·1,·'gmx::FreeEnergyPerturbationData::Element::clientID()'],
 884 ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a7bec0626f7b0334084b1de0d74f017ff',·1,·'gmx::EnergyData::Element::clientID()']
885 ····]],885 ····]],
886 ····['clientsocket_595',·['clientsocket',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#adfd42d6e6976ab4573e70c798e685c23',·1,·'gmx::ImdSession::Impl']]],886 ····['clientsocket_595',·['clientsocket',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#adfd42d6e6976ab4573e70c798e685c23',·1,·'gmx::ImdSession::Impl']]],
 887 ····['clone_596',·['clone',·['../classgmx_1_1AbstractAverageHistogram.xhtml#ae41c64629aa1fdbc6aa79f6e2c842c7f',·1,·'gmx::AbstractAverageHistogram::clone()'],
887 ····['clone_596',·['clone',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml#acbaf7e69026d8eb4539b4d039f8ca4b2',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct::clone()'],888 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml#acbaf7e69026d8eb4539b4d039f8ca4b2',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct::clone()'],
888 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml#a06da6c303c493beb97fc95f5d6265801',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy::clone()'],889 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml#a06da6c303c493beb97fc95f5d6265801',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy::clone()'],
889 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml#a19b0f24b941e857b7d8bba44fdf880db',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation::clone()'],890 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml#a19b0f24b941e857b7d8bba44fdf880db',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation::clone()']
890 ········['../classgmx_1_1AbstractAverageHistogram.xhtml#ae41c64629aa1fdbc6aa79f6e2c842c7f',·1,·'gmx::AbstractAverageHistogram::clone()'] 
891 ····]],891 ····]],
892 ····['cloneonspawnedthread_597',·['cloneOnSpawnedThread',·['../classgmx_1_1Mdrunner.xhtml#a7c3f076c50e8a65e46c45964586ef0ac',·1,·'gmx::Mdrunner']]],892 ····['cloneonspawnedthread_597',·['cloneOnSpawnedThread',·['../classgmx_1_1Mdrunner.xhtml#a7c3f076c50e8a65e46c45964586ef0ac',·1,·'gmx::Mdrunner']]],
 893 ····['close_598',·['close',·['../classgmx_1_1StandardInputStream.xhtml#ad47b5f004707624d1ba6963f4cf425d2',·1,·'gmx::StandardInputStream::close()'],
893 ····['close_598',·['close',·['../classgmx_1_1TextOutputStream.xhtml#a8c624ae9199c3bfd37bc35a1beb7852f',·1,·'gmx::TextOutputStream::close()'], 
894 ········['../classgmx_1_1TextWriter.xhtml#aeb5664c1d354a35f621061f73888fb0d',·1,·'gmx::TextWriter::close()'], 
895 ········['../classgmx_1_1TextInputStream.xhtml#ad8b5700fa45d4eb69105238d9fdfaca7',·1,·'gmx::TextInputStream::close()'], 
896 ········['../classgmx_1_1TextReader.xhtml#a832ce4203c67ac5b86859954c8c96b8f',·1,·'gmx::TextReader::close()'], 
897 ········['../classgmx_1_1StringInputStream.xhtml#abb10d95192f3e79d19764855bcbd1739',·1,·'gmx::StringInputStream::close()'], 
898 ········['../classgmx_1_1TextOutputFile.xhtml#a0e112f234e5bc3c42d4d01087412af56',·1,·'gmx::TextOutputFile::close()'],894 ········['../classgmx_1_1TextOutputFile.xhtml#a0e112f234e5bc3c42d4d01087412af56',·1,·'gmx::TextOutputFile::close()'],
 895 ········['../classgmx_1_1StringOutputStream.xhtml#a72a9089f662d660616d6ed419d0efe93',·1,·'gmx::StringOutputStream::close()'],
899 ········['../classgmx_1_1TextInputFile.xhtml#a206e851131b014eaef22f56217092e27',·1,·'gmx::TextInputFile::close()'],896 ········['../classgmx_1_1TextInputFile.xhtml#a206e851131b014eaef22f56217092e27',·1,·'gmx::TextInputFile::close()'],
 897 ········['../classgmx_1_1StringInputStream.xhtml#abb10d95192f3e79d19764855bcbd1739',·1,·'gmx::StringInputStream::close()'],
 898 ········['../classgmx_1_1TextWriter.xhtml#aeb5664c1d354a35f621061f73888fb0d',·1,·'gmx::TextWriter::close()'],
 899 ········['../classgmx_1_1TextOutputStream.xhtml#a8c624ae9199c3bfd37bc35a1beb7852f',·1,·'gmx::TextOutputStream::close()'],
 900 ········['../classgmx_1_1TextReader.xhtml#a832ce4203c67ac5b86859954c8c96b8f',·1,·'gmx::TextReader::close()'],
900 ········['../classgmx_1_1StandardInputStream.xhtml#ad47b5f004707624d1ba6963f4cf425d2',·1,·'gmx::StandardInputStream::close()'],901 ········['../classgmx_1_1TextInputStream.xhtml#ad8b5700fa45d4eb69105238d9fdfaca7',·1,·'gmx::TextInputStream::close()']
901 ········['../classgmx_1_1StringOutputStream.xhtml#a72a9089f662d660616d6ed419d0efe93',·1,·'gmx::StringOutputStream::close()'] 
902 ····]],902 ····]],
903 ····['close_5fsymtab_599',·['close_symtab',·['../symtab_8h.xhtml#ac1312ed27b85821cdccb3980d81f8026',·1,·'symtab.h']]],903 ····['close_5fsymtab_599',·['close_symtab',·['../symtab_8h.xhtml#ac1312ed27b85821cdccb3980d81f8026',·1,·'symtab.h']]],
904 ····['closeafterforcecomputationcpu_600',·['closeAfterForceComputationCpu',·['../classDDBalanceRegionHandler.xhtml#a9bc7829dd33672815fe2aedb19c9e694',·1,·'DDBalanceRegionHandler']]],904 ····['closeafterforcecomputationcpu_600',·['closeAfterForceComputationCpu',·['../classDDBalanceRegionHandler.xhtml#a9bc7829dd33672815fe2aedb19c9e694',·1,·'DDBalanceRegionHandler']]],
905 ····['closeafterforcecomputationgpu_601',·['closeAfterForceComputationGpu',·['../classDDBalanceRegionHandler.xhtml#abadc78a643b88af716117f0b46ba5473',·1,·'DDBalanceRegionHandler']]],905 ····['closeafterforcecomputationgpu_601',·['closeAfterForceComputationGpu',·['../classDDBalanceRegionHandler.xhtml#abadc78a643b88af716117f0b46ba5473',·1,·'DDBalanceRegionHandler']]],
906 ····['closelogfile_602',·['closeLogFile',·['../namespacegmx.xhtml#a3f56998ae7a3341da06ae004304cf59a',·1,·'gmx']]],906 ····['closelogfile_602',·['closeLogFile',·['../namespacegmx.xhtml#a3f56998ae7a3341da06ae004304cf59a',·1,·'gmx']]],
907 ····['closestintegerpoint_603',·['closestIntegerPoint',·['../namespacegmx_1_1anonymous__namespace_02gausstransform_8cpp_03.xhtml#ac925f65cbdb7cead0786b53978e1b525',·1,·'gmx::anonymous_namespace{gausstransform.cpp}']]],907 ····['closestintegerpoint_603',·['closestIntegerPoint',·['../namespacegmx_1_1anonymous__namespace_02gausstransform_8cpp_03.xhtml#ac925f65cbdb7cead0786b53978e1b525',·1,·'gmx::anonymous_namespace{gausstransform.cpp}']]],
 908 ····['closetimingregion_604',·['closetimingregion',·['../classGpuRegionTimerImpl.xhtml#aeb3038f3162054db1b0545b5a091bd08',·1,·'GpuRegionTimerImpl::closeTimingRegion()'],
908 ····['closetimingregion_604',·['closetimingregion',·['../classGpuRegionTimerWrapper.xhtml#a5ca4467b5e552f30d68ab47a6b232a15',·1,·'GpuRegionTimerWrapper::closeTimingRegion()'],909 ········['../classGpuRegionTimerWrapper.xhtml#a5ca4467b5e552f30d68ab47a6b232a15',·1,·'GpuRegionTimerWrapper::closeTimingRegion()']
909 ········['../classGpuRegionTimerImpl.xhtml#aeb3038f3162054db1b0545b5a091bd08',·1,·'GpuRegionTimerImpl::closeTimingRegion()'] 
910 ····]],910 ····]],
911 ····['cluster_20non_20bonded_20algorithm_605',·['The·NxM·atom-cluster·non-bonded·algorithm',·['../page_nbnxm.xhtml',·1,·'index']]],911 ····['cluster_20non_20bonded_20algorithm_605',·['The·NxM·atom-cluster·non-bonded·algorithm',·['../page_nbnxm.xhtml',·1,·'index']]],
912 ····['clusterboundingboxdistance2_606',·['clusterBoundingBoxDistance2',·['../namespacegmx.xhtml#a2ccdf8ae57a26daaf6f5db537d6ea54e',·1,·'gmx']]],912 ····['clusterboundingboxdistance2_606',·['clusterBoundingBoxDistance2',·['../namespacegmx.xhtml#a2ccdf8ae57a26daaf6f5db537d6ea54e',·1,·'gmx']]],
913 ····['clusterdistancekerneltype_607',·['ClusterDistanceKernelType',·['../namespacegmx.xhtml#a3f42ed0b9f4da1face257003c06bfddb',·1,·'gmx']]],913 ····['clusterdistancekerneltype_607',·['ClusterDistanceKernelType',·['../namespacegmx.xhtml#a3f42ed0b9f4da1face257003c06bfddb',·1,·'gmx']]],
914 ····['clusterdistancekerneltype_2eh_608',·['clusterdistancekerneltype.h',·['../clusterdistancekerneltype_8h.xhtml',·1,·'']]],914 ····['clusterdistancekerneltype_2eh_608',·['clusterdistancekerneltype.h',·['../clusterdistancekerneltype_8h.xhtml',·1,·'']]],
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179 ····]],179 ····]],
180 ····['dd_5fdlb_5fis_5flocked_98',·['dd_dlb_is_locked',·['../dlb_8h.xhtml#a7dbea4dd0a5cf6f4c2aa1319a0af8aeb',·1,·'dd_dlb_is_locked(const·gmx_domdec_t·*dd):&#160;dlb.cpp'],180 ····['dd_5fdlb_5fis_5flocked_98',·['dd_dlb_is_locked',·['../dlb_8h.xhtml#a7dbea4dd0a5cf6f4c2aa1319a0af8aeb',·1,·'dd_dlb_is_locked(const·gmx_domdec_t·*dd):&#160;dlb.cpp'],
181 ········['../dlb_8cpp.xhtml#a899f4a25dfaf308a33ecffdb67806db3',·1,·'dd_dlb_is_locked(const·gmx_domdec_t·*dd):&#160;dlb.cpp']181 ········['../dlb_8cpp.xhtml#a899f4a25dfaf308a33ecffdb67806db3',·1,·'dd_dlb_is_locked(const·gmx_domdec_t·*dd):&#160;dlb.cpp']
182 ····]],182 ····]],
183 ····['dd_5fdlb_5fis_5fon_99',·['dd_dlb_is_on',·['../dlb_8h.xhtml#a5cb0b1121277d4a045bcfe8393dec49f',·1,·'dd_dlb_is_on(const·gmx_domdec_t·*dd):&#160;dlb.cpp'],183 ····['dd_5fdlb_5fis_5fon_99',·['dd_dlb_is_on',·['../dlb_8h.xhtml#a5cb0b1121277d4a045bcfe8393dec49f',·1,·'dd_dlb_is_on(const·gmx_domdec_t·*dd):&#160;dlb.cpp'],
184 ········['../dlb_8cpp.xhtml#a29fb885d2d539a7c4ea3a35e54e18e1a',·1,·'dd_dlb_is_on(const·gmx_domdec_t·*dd):&#160;dlb.cpp']184 ········['../dlb_8cpp.xhtml#a29fb885d2d539a7c4ea3a35e54e18e1a',·1,·'dd_dlb_is_on(const·gmx_domdec_t·*dd):&#160;dlb.cpp']
185 ····]],185 ····]],
 186 ····['dd_5fdlb_5flock_100',·['dd_dlb_lock',·['../dlb_8cpp.xhtml#a63f21edf06d87dc8d027fae518471ff3',·1,·'dd_dlb_lock(gmx_domdec_t·*dd):&#160;dlb.cpp'],
186 ····['dd_5fdlb_5flock_100',·['dd_dlb_lock',·['../dlb_8h.xhtml#ace557070a75d6e41050d67978e8d34e6',·1,·'dd_dlb_lock(struct·gmx_domdec_t·*dd):&#160;dlb.cpp'],187 ········['../dlb_8h.xhtml#ace557070a75d6e41050d67978e8d34e6',·1,·'dd_dlb_lock(struct·gmx_domdec_t·*dd):&#160;dlb.cpp']
187 ········['../dlb_8cpp.xhtml#a63f21edf06d87dc8d027fae518471ff3',·1,·'dd_dlb_lock(gmx_domdec_t·*dd):&#160;dlb.cpp'] 
188 ····]],188 ····]],
189 ····['dd_5fdlb_5fset_5fshould_5fcheck_5fwhether_5fto_5fturn_5fdlb_5fon_101',·['dd_dlb_set_should_check_whether_to_turn_dlb_on',·['../dlb_8cpp.xhtml#ad52ec18962905f9fe87ab958e6a41516',·1,·'dd_dlb_set_should_check_whether_to_turn_dlb_on(gmx_domdec_t·*dd,·gmx_bool·bValue):&#160;dlb.cpp'],189 ····['dd_5fdlb_5fset_5fshould_5fcheck_5fwhether_5fto_5fturn_5fdlb_5fon_101',·['dd_dlb_set_should_check_whether_to_turn_dlb_on',·['../dlb_8cpp.xhtml#ad52ec18962905f9fe87ab958e6a41516',·1,·'dd_dlb_set_should_check_whether_to_turn_dlb_on(gmx_domdec_t·*dd,·gmx_bool·bValue):&#160;dlb.cpp'],
190 ········['../dlb_8h.xhtml#aa992d66dad111b73b1ad20e096aefe9e',·1,·'dd_dlb_set_should_check_whether_to_turn_dlb_on(gmx_domdec_t·*dd,·bool·bValue):&#160;dlb.cpp']190 ········['../dlb_8h.xhtml#aa992d66dad111b73b1ad20e096aefe9e',·1,·'dd_dlb_set_should_check_whether_to_turn_dlb_on(gmx_domdec_t·*dd,·bool·bValue):&#160;dlb.cpp']
191 ····]],191 ····]],
192 ····['dd_5fdlb_5funlock_102',·['dd_dlb_unlock',·['../dlb_8cpp.xhtml#a332af6ebbafa9cfb146142c48d17292f',·1,·'dd_dlb_unlock(gmx_domdec_t·*dd):&#160;dlb.cpp'],192 ····['dd_5fdlb_5funlock_102',·['dd_dlb_unlock',·['../dlb_8cpp.xhtml#a332af6ebbafa9cfb146142c48d17292f',·1,·'dd_dlb_unlock(gmx_domdec_t·*dd):&#160;dlb.cpp'],
193 ········['../dlb_8h.xhtml#ab40142ccd9301de26265db1f0d3c2f63',·1,·'dd_dlb_unlock(struct·gmx_domdec_t·*dd):&#160;dlb.cpp']193 ········['../dlb_8h.xhtml#ab40142ccd9301de26265db1f0d3c2f63',·1,·'dd_dlb_unlock(struct·gmx_domdec_t·*dd):&#160;dlb.cpp']
194 ····]],194 ····]],
Offset 453, 28 lines modifiedOffset 453, 28 lines modified
453 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#ab390de4a90d3b122cc6d54862bfc158f',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(DensityFittingAmplitudeLookup·&amp;&amp;other)·noexcept']453 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#ab390de4a90d3b122cc6d54862bfc158f',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(DensityFittingAmplitudeLookup·&amp;&amp;other)·noexcept']
454 ····]],454 ····]],
455 ····['densityfittingamplitudelookup_2ecpp_279',·['densityfittingamplitudelookup.cpp',·['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],455 ····['densityfittingamplitudelookup_2ecpp_279',·['densityfittingamplitudelookup.cpp',·['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],
456 ········['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']456 ········['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']
457 ····]],457 ····]],
458 ····['densityfittingamplitudelookup_2eh_280',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],458 ····['densityfittingamplitudelookup_2eh_280',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],
459 ····['densityfittingamplitudemethod_281',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]],459 ····['densityfittingamplitudemethod_281',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]],
 460 ····['densityfittingforce_282',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce'],
460 ····['densityfittingforce_282',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&amp;kernelShapeParameters)'],461 ········['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&amp;kernelShapeParameters)'],
461 ········['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&amp;other)'],462 ········['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&amp;other)'],
462 ········['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce'], 
463 ········['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce()']463 ········['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce(DensityFittingForce·&amp;&amp;other)·noexcept']
464 ····]],464 ····]],
465 ····['densityfittingforce_2ecpp_283',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],465 ····['densityfittingforce_2ecpp_283',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],
466 ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']466 ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']
467 ····]],467 ····]],
468 ····['densityfittingforce_2eh_284',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],468 ····['densityfittingforce_2eh_284',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],
469 ····['densityfittingforceprovider_285',·['densityfittingforceprovider',·['../classgmx_1_1DensityFittingForceProvider.xhtml#a99f34ce28c7c4b269fe7b9cc0c61c255',·1,·'gmx::DensityFittingForceProvider::DensityFittingForceProvider()'],469 ····['densityfittingforceprovider_285',·['densityfittingforceprovider',·['../classgmx_1_1DensityFittingForceProvider.xhtml#a99f34ce28c7c4b269fe7b9cc0c61c255',·1,·'gmx::DensityFittingForceProvider::DensityFittingForceProvider()'],
470 ········['../classgmx_1_1DensityFittingForceProvider.xhtml',·1,·'gmx::DensityFittingForceProvider']470 ········['../classgmx_1_1DensityFittingForceProvider.xhtml',·1,·'gmx::DensityFittingForceProvider']
471 ····]],471 ····]],
472 ····['densityfittingforceprovider_2ecpp_286',·['densityfittingforceprovider.cpp',·['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],472 ····['densityfittingforceprovider_2ecpp_286',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
473 ········['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']473 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
474 ····]],474 ····]],
475 ····['densityfittingforceprovider_2eh_287',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],475 ····['densityfittingforceprovider_2eh_287',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],
476 ····['densityfittingforceproviderstate_288',·['DensityFittingForceProviderState',·['../structgmx_1_1DensityFittingForceProviderState.xhtml',·1,·'gmx']]],476 ····['densityfittingforceproviderstate_288',·['DensityFittingForceProviderState',·['../structgmx_1_1DensityFittingForceProviderState.xhtml',·1,·'gmx']]],
477 ····['densityfittingmdptransformfromstring_289',·['densityfittingMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02densityfittingoptions_8cpp_03.xhtml#ad01120df989f6892f2b3716de8220d89',·1,·'gmx::anonymous_namespace{densityfittingoptions.cpp}']]],477 ····['densityfittingmdptransformfromstring_289',·['densityfittingMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02densityfittingoptions_8cpp_03.xhtml#ad01120df989f6892f2b3716de8220d89',·1,·'gmx::anonymous_namespace{densityfittingoptions.cpp}']]],
478 ····['densityfittingmodule_2ecpp_290',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],478 ····['densityfittingmodule_2ecpp_290',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],
479 ····['densityfittingmoduleinfo_291',·['DensityFittingModuleInfo',·['../structgmx_1_1DensityFittingModuleInfo.xhtml',·1,·'gmx']]],479 ····['densityfittingmoduleinfo_291',·['DensityFittingModuleInfo',·['../structgmx_1_1DensityFittingModuleInfo.xhtml',·1,·'gmx']]],
480 ····['densityfittingoptions_292',·['DensityFittingOptions',·['../classgmx_1_1DensityFittingOptions.xhtml',·1,·'gmx']]],480 ····['densityfittingoptions_292',·['DensityFittingOptions',·['../classgmx_1_1DensityFittingOptions.xhtml',·1,·'gmx']]],
Offset 488, 16 lines modifiedOffset 488, 16 lines modified
488 ····['densityfittingparameters_298',·['DensityFittingParameters',·['../structgmx_1_1DensityFittingParameters.xhtml',·1,·'gmx']]],488 ····['densityfittingparameters_298',·['DensityFittingParameters',·['../structgmx_1_1DensityFittingParameters.xhtml',·1,·'gmx']]],
489 ····['densityfittingparameters_2eh_299',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],489 ····['densityfittingparameters_2eh_299',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],
490 ····['densityfittingsimulationparametersetup_300',·['DensityFittingSimulationParameterSetup',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}']]],490 ····['densityfittingsimulationparametersetup_300',·['DensityFittingSimulationParameterSetup',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}']]],
491 ····['densityfittingtest_301',·['DensityFittingTest',·['../classgmx_1_1test_1_1DensityFittingTest.xhtml',·1,·'gmx::test']]],491 ····['densityfittingtest_301',·['DensityFittingTest',·['../classgmx_1_1test_1_1DensityFittingTest.xhtml',·1,·'gmx::test']]],
492 ····['densitysimilaritycrosscorrelation_302',·['densitysimilaritycrosscorrelation',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml#a4ee22cb21ab72112c8abf3e587e5eccd',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation::DensitySimilarityCrossCorrelation()'],492 ····['densitysimilaritycrosscorrelation_302',·['densitysimilaritycrosscorrelation',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml#a4ee22cb21ab72112c8abf3e587e5eccd',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation::DensitySimilarityCrossCorrelation()'],
493 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation']493 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation']
494 ····]],494 ····]],
495 ····['densitysimilarityinnerproduct_303',·['densitysimilarityinnerproduct',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct'],495 ····['densitysimilarityinnerproduct_303',·['densitysimilarityinnerproduct',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml#a96f37a060eef783e6c336578c6b17ffa',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct::DensitySimilarityInnerProduct()'],
496 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml#a96f37a060eef783e6c336578c6b17ffa',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct::DensitySimilarityInnerProduct()']496 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct']
497 ····]],497 ····]],
498 ····['densitysimilaritymeasure_304',·['densitysimilaritymeasure',·['../classgmx_1_1DensitySimilarityMeasure.xhtml#a188a695f4f6981e8e79736214b2dffed',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasureMethod·method,·density·referenceDensity)'],498 ····['densitysimilaritymeasure_304',·['densitysimilaritymeasure',·['../classgmx_1_1DensitySimilarityMeasure.xhtml#a188a695f4f6981e8e79736214b2dffed',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasureMethod·method,·density·referenceDensity)'],
499 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#af093604e59c0ae7d7a00cc06d254b7de',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasure·&amp;&amp;other)·noexcept'],499 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#af093604e59c0ae7d7a00cc06d254b7de',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasure·&amp;&amp;other)·noexcept'],
500 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml',·1,·'gmx::DensitySimilarityMeasure'],500 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml',·1,·'gmx::DensitySimilarityMeasure'],
501 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#aa928209c9b6274f37b3feb27487982e0',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure()']501 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#aa928209c9b6274f37b3feb27487982e0',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure()']
502 ····]],502 ····]],
503 ····['densitysimilaritymeasuremethod_305',·['DensitySimilarityMeasureMethod',·['../namespacegmx.xhtml#a659cc27006f5ed7f2ecb076126f0857f',·1,·'gmx']]],503 ····['densitysimilaritymeasuremethod_305',·['DensitySimilarityMeasureMethod',·['../namespacegmx.xhtml#a659cc27006f5ed7f2ecb076126f0857f',·1,·'gmx']]],
Offset 505, 16 lines modifiedOffset 505, 16 lines modified
505 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy']505 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy']
506 ····]],506 ····]],
507 ····['dependency_20graph_307',·['Module·dependency·graph',·['../page_modulegraph.xhtml',·1,·'index']]],507 ····['dependency_20graph_307',·['Module·dependency·graph',·['../page_modulegraph.xhtml',·1,·'index']]],
508 ····['derivative_308',·['derivative',·['../structgmx_1_1NumericalSplineTableInput.xhtml#a5a62dd0e8d27284c17e59cd4a6e2f1b5',·1,·'gmx::NumericalSplineTableInput::derivative'],508 ····['derivative_308',·['derivative',·['../structgmx_1_1NumericalSplineTableInput.xhtml#a5a62dd0e8d27284c17e59cd4a6e2f1b5',·1,·'gmx::NumericalSplineTableInput::derivative'],
509 ········['../structgmx_1_1AnalyticalSplineTableInput.xhtml#a5163c472ec0200cd6c48dbe7075fb5f7',·1,·'gmx::AnalyticalSplineTableInput::derivative']509 ········['../structgmx_1_1AnalyticalSplineTableInput.xhtml#a5163c472ec0200cd6c48dbe7075fb5f7',·1,·'gmx::AnalyticalSplineTableInput::derivative']
510 ····]],510 ····]],
511 ····['desc_309',·['desc',·['../structt__pargs.xhtml#a6ad8807f446b68a6c8d764ecb394feaa',·1,·'t_pargs::desc'],511 ····['desc_309',·['desc',·['../structt__pargs.xhtml#a6ad8807f446b68a6c8d764ecb394feaa',·1,·'t_pargs::desc'],
512 ········['../structgmx_1_1NumericalSplineTableInput.xhtml#aba3ffc19198b0d92459e38438108c8a7',·1,·'gmx::NumericalSplineTableInput::desc'], 
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548 ········['../devicebuffer__ocl_8h.xhtml#a008d8a7fc47c0b7d231d7b7ca91e928f',·1,·'destroyParamLookupTable(DeviceBuffer&lt;·ValueType·&gt;·*deviceBuffer,·const·DeviceTexture·&amp;):&#160;devicebuffer_ocl.h'],548 ········['../devicebuffer__ocl_8h.xhtml#a008d8a7fc47c0b7d231d7b7ca91e928f',·1,·'destroyParamLookupTable(DeviceBuffer&lt;·ValueType·&gt;·*deviceBuffer,·const·DeviceTexture·&amp;):&#160;devicebuffer_ocl.h'],
549 ········['../devicebuffer__sycl_8h.xhtml#a6845da322375b65f6c5402b4cccf17dd',·1,·'destroyParamLookupTable(DeviceBuffer&lt;·ValueType·&gt;·*deviceBuffer,·DeviceTexture·*):&#160;devicebuffer_sycl.h']549 ········['../devicebuffer__sycl_8h.xhtml#a6845da322375b65f6c5402b4cccf17dd',·1,·'destroyParamLookupTable(DeviceBuffer&lt;·ValueType·&gt;·*deviceBuffer,·DeviceTexture·*):&#160;devicebuffer_sycl.h']
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284 ········['../namespacegmx.xhtml#ad27509079b48f39c3f4fab22fd1a7796',·1,·'gmx::end(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
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286 ········['../namespacegmx.xhtml#adc38f264fbd12f7c458acaa006bafc23',·1,·'gmx::end(const·BasicMdspan·&amp;basicMdspan)'] 
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292 ····['endindex_173',·['endIndex',·['../structgmx_1_1SelectionLocation.xhtml#a41e340847acbb630e084602422793e99',·1,·'gmx::SelectionLocation']]],292 ····['endindex_173',·['endIndex',·['../structgmx_1_1SelectionLocation.xhtml#a41e340847acbb630e084602422793e99',·1,·'gmx::SelectionLocation']]],
293 ····['enditerator_174',·['endIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#aa020bd1b932f67be6353e08f48d990da',·1,·'gmx::SelectionParserSymbolTable']]],293 ····['enditerator_174',·['endIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#aa020bd1b932f67be6353e08f48d990da',·1,·'gmx::SelectionParserSymbolTable']]],
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36 ····['fclose_5fwrapper_18',·['fclose_wrapper',·['../namespacegmx.xhtml#a2d82b9b01f203ad5d99eaa11afb0e2fb',·1,·'gmx']]],36 ····['fclose_5fwrapper_18',·['fclose_wrapper',·['../namespacegmx.xhtml#a2d82b9b01f203ad5d99eaa11afb0e2fb',·1,·'gmx']]],
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38 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03.xhtml#a322edc57107adfbd9f0d8c1d838a05a5',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::fcloseWrapper()']37 ····['fclosewrapper_19',·['fclosewrapper',·['../namespacegmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03.xhtml#a322edc57107adfbd9f0d8c1d838a05a5',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::fcloseWrapper()'],
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41 ····['feature_21',·['feature',·['../classgmx_1_1CpuInfo.xhtml#a634410a544ba8fb20dfd94f53e7cb27f',·1,·'gmx::CpuInfo::feature(Feature·f)·const'],41 ····['feature_21',·['feature',·['../classgmx_1_1CpuInfo.xhtml#a634410a544ba8fb20dfd94f53e7cb27f',·1,·'gmx::CpuInfo::feature(Feature·f)·const'],
42 ········['../classgmx_1_1CpuInfo.xhtml#ac8981fb299411577dccba90b335a9085',·1,·'gmx::CpuInfo::Feature']42 ········['../classgmx_1_1CpuInfo.xhtml#ac8981fb299411577dccba90b335a9085',·1,·'gmx::CpuInfo::Feature']
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45 ····['featureset_23',·['featureSet',·['../classgmx_1_1CpuInfo.xhtml#ac826abf4d614f73e5d8c7d2958ce30e6',·1,·'gmx::CpuInfo']]],45 ····['featureset_23',·['featureSet',·['../classgmx_1_1CpuInfo.xhtml#ac826abf4d614f73e5d8c7d2958ce30e6',·1,·'gmx::CpuInfo']]],
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51 ····['fep_5fstate_27',·['fep_state',·['../structTpxFileHeader.xhtml#a3e6d181da70f5976a240943c94d74969',·1,·'TpxFileHeader::fep_state'],51 ····['fep_5fstate_27',·['fep_state',·['../structTpxFileHeader.xhtml#a3e6d181da70f5976a240943c94d74969',·1,·'TpxFileHeader::fep_state'],
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55 ····['fep_5fstate_5fb_29',·['FEP_STATE_B',·['../pme__gpu__internal_8h.xhtml#ae6dd68494c14b66f86ff58a5e0a1aa93',·1,·'pme_gpu_internal.h']]],55 ····['fep_5fstate_5fb_29',·['FEP_STATE_B',·['../pme__gpu__internal_8h.xhtml#ae6dd68494c14b66f86ff58a5e0a1aa93',·1,·'pme_gpu_internal.h']]],
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61 ····['feplambdastate_33',·['fepLambdaState',·['../classgmx_1_1Awh.xhtml#adfc3a70dde1b72c20abe5688cf98d4ba',·1,·'gmx::Awh']]],61 ····['feplambdastate_33',·['fepLambdaState',·['../classgmx_1_1Awh.xhtml#adfc3a70dde1b72c20abe5688cf98d4ba',·1,·'gmx::Awh']]],
62 ····['feplists_34',·['fepLists',·['../classgmx_1_1PairlistSet.xhtml#a2f86424e43ae14d1334dc9485c40b876',·1,·'gmx::PairlistSet']]],62 ····['feplists_34',·['fepLists',·['../classgmx_1_1PairlistSet.xhtml#a2f86424e43ae14d1334dc9485c40b876',·1,·'gmx::PairlistSet']]],
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67 ········['../structFEPStateValue.xhtml#ae45c0dca25a0b1b48a68c10767d59483',·1,·'FEPStateValue::FEPStateValue(T·value)']67 ········['../structFEPStateValue.xhtml#ae45c0dca25a0b1b48a68c10767d59483',·1,·'FEPStateValue::FEPStateValue(T·value)']
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41 ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]],41 ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]],
42 ····['boundingbox_2eh_34',·['boundingbox.h',·['../boundingbox_8h.xhtml',·1,·'']]],42 ····['boundingbox_2eh_34',·['boundingbox.h',·['../boundingbox_8h.xhtml',·1,·'']]],
43 ····['boundingbox_5fsimd_2eh_35',·['boundingbox_simd.h',·['../boundingbox__simd_8h.xhtml',·1,·'']]],43 ····['boundingbox_5fsimd_2eh_35',·['boundingbox_simd.h',·['../boundingbox__simd_8h.xhtml',·1,·'']]],
44 ····['boundingboxdistance_2eh_36',·['boundingboxdistance.h',·['../boundingboxdistance_8h.xhtml',·1,·'']]],44 ····['boundingboxdistance_2eh_36',·['boundingboxdistance.h',·['../boundingboxdistance_8h.xhtml',·1,·'']]],
45 ····['box_2ecpp_37',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]],45 ····['box_2ecpp_37',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]],
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3 ········['../modules_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)']3 ········['../tests_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)']
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10 ····['scanner_5finternal_2ecpp_6',·['scanner_internal.cpp',·['../scanner__internal_8cpp.xhtml',·1,·'']]],10 ····['scanner_5finternal_2ecpp_6',·['scanner_internal.cpp',·['../scanner__internal_8cpp.xhtml',·1,·'']]],
Offset 63, 20 lines modifiedOffset 63, 20 lines modified
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64 ····['setbox_2eh_50',·['setbox.h',·['../setbox_8h.xhtml',·1,·'']]],64 ····['setbox_2eh_50',·['setbox.h',·['../setbox_8h.xhtml',·1,·'']]],
65 ····['setenv_2eh_51',·['setenv.h',·['../setenv_8h.xhtml',·1,·'']]],65 ····['setenv_2eh_51',·['setenv.h',·['../setenv_8h.xhtml',·1,·'']]],
66 ····['setforces_2ecpp_52',·['setforces.cpp',·['../setforces_8cpp.xhtml',·1,·'']]],66 ····['setforces_2ecpp_52',·['setforces.cpp',·['../setforces_8cpp.xhtml',·1,·'']]],
67 ····['setforces_2eh_53',·['setforces.h',·['../setforces_8h.xhtml',·1,·'']]],67 ····['setforces_2eh_53',·['setforces.h',·['../setforces_8h.xhtml',·1,·'']]],
68 ····['setprecision_2ecpp_54',·['setprecision.cpp',·['../setprecision_8cpp.xhtml',·1,·'']]],68 ····['setprecision_2ecpp_54',·['setprecision.cpp',·['../setprecision_8cpp.xhtml',·1,·'']]],
69 ····['setprecision_2eh_55',·['setprecision.h',·['../setprecision_8h.xhtml',·1,·'']]],69 ····['setprecision_2eh_55',·['setprecision.h',·['../setprecision_8h.xhtml',·1,·'']]],
70 ····['setstarttime_2ecpp_56',·['setstarttime.cpp',·['../outputadapters_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)'],70 ····['setstarttime_2ecpp_56',·['setstarttime.cpp',·['../tests_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)'],
71 ········['../tests_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)']71 ········['../outputadapters_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)']
72 ····]],72 ····]],
73 ····['setstarttime_2eh_57',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]],73 ····['setstarttime_2eh_57',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]],
74 ····['settimestep_2ecpp_58',·['settimestep.cpp',·['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],74 ····['settimestep_2ecpp_58',·['settimestep.cpp',·['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],
75 ········['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']75 ········['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']
76 ····]],76 ····]],
77 ····['settimestep_2eh_59',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],77 ····['settimestep_2eh_59',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],
78 ····['settle_2ecpp_60',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'],78 ····['settle_2ecpp_60',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'],
79 ········['../settle_8cpp.xhtml',·1,·'(Global·Namespace)']79 ········['../settle_8cpp.xhtml',·1,·'(Global·Namespace)']
80 ····]],80 ····]],
81 ····['settle_2eh_61',·['settle.h',·['../settle_8h.xhtml',·1,·'']]],81 ····['settle_2eh_61',·['settle.h',·['../settle_8h.xhtml',·1,·'']]],
82 ····['settle_5fgpu_2ecpp_62',·['settle_gpu.cpp',·['../settle__gpu_8cpp.xhtml',·1,·'']]],82 ····['settle_5fgpu_2ecpp_62',·['settle_gpu.cpp',·['../settle__gpu_8cpp.xhtml',·1,·'']]],
Offset 112, 16 lines modifiedOffset 112, 16 lines modified
112 ····['simple_5fmdrun_2ecpp_90',·['simple_mdrun.cpp',·['../simple__mdrun_8cpp.xhtml',·1,·'']]],112 ····['simple_5fmdrun_2ecpp_90',·['simple_mdrun.cpp',·['../simple__mdrun_8cpp.xhtml',·1,·'']]],
113 ····['simulation_5fworkload_2eh_91',·['simulation_workload.h',·['../simulation__workload_8h.xhtml',·1,·'']]],113 ····['simulation_5fworkload_2eh_91',·['simulation_workload.h',·['../simulation__workload_8h.xhtml',·1,·'']]],
114 ····['simulationcontext_2eh_92',·['simulationcontext.h',·['../simulationcontext_8h.xhtml',·1,·'']]],114 ····['simulationcontext_2eh_92',·['simulationcontext.h',·['../simulationcontext_8h.xhtml',·1,·'']]],
115 ····['simulationdatabase_2ecpp_93',·['simulationdatabase.cpp',·['../simulationdatabase_8cpp.xhtml',·1,·'']]],115 ····['simulationdatabase_2ecpp_93',·['simulationdatabase.cpp',·['../simulationdatabase_8cpp.xhtml',·1,·'']]],
116 ····['simulationdatabase_2eh_94',·['simulationdatabase.h',·['../simulationdatabase_8h.xhtml',·1,·'']]],116 ····['simulationdatabase_2eh_94',·['simulationdatabase.h',·['../simulationdatabase_8h.xhtml',·1,·'']]],
117 ····['simulationinput_2eh_95',·['simulationinput.h',·['../simulationinput_8h.xhtml',·1,·'']]],117 ····['simulationinput_2eh_95',·['simulationinput.h',·['../simulationinput_8h.xhtml',·1,·'']]],
118 ····['simulationinputhandle_2eh_96',·['simulationinputhandle.h',·['../simulationinputhandle_8h.xhtml',·1,·'']]],118 ····['simulationinputhandle_2eh_96',·['simulationinputhandle.h',·['../simulationinputhandle_8h.xhtml',·1,·'']]],
119 ····['simulationsignal_2ecpp_97',·['simulationsignal.cpp',·['../tests_2simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)'],119 ····['simulationsignal_2ecpp_97',·['simulationsignal.cpp',·['../simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)'],
120 ········['../simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)']120 ········['../tests_2simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)']
121 ····]],121 ····]],
122 ····['simulationsignal_2eh_98',·['simulationsignal.h',·['../simulationsignal_8h.xhtml',·1,·'']]],122 ····['simulationsignal_2eh_98',·['simulationsignal.h',·['../simulationsignal_8h.xhtml',·1,·'']]],
123 ····['simulator_2ecpp_99',·['simulator.cpp',·['../simulator_8cpp.xhtml',·1,·'']]],123 ····['simulator_2ecpp_99',·['simulator.cpp',·['../simulator_8cpp.xhtml',·1,·'']]],
124 ····['simulatoralgorithm_2ecpp_100',·['simulatoralgorithm.cpp',·['../simulatoralgorithm_8cpp.xhtml',·1,·'']]],124 ····['simulatoralgorithm_2ecpp_100',·['simulatoralgorithm.cpp',·['../simulatoralgorithm_8cpp.xhtml',·1,·'']]],
125 ····['simulatoralgorithm_2eh_101',·['simulatoralgorithm.h',·['../simulatoralgorithm_8h.xhtml',·1,·'']]],125 ····['simulatoralgorithm_2eh_101',·['simulatoralgorithm.h',·['../simulatoralgorithm_8h.xhtml',·1,·'']]],
126 ····['simulatorbuilder_2ecpp_102',·['simulatorbuilder.cpp',·['../simulatorbuilder_8cpp.xhtml',·1,·'']]],126 ····['simulatorbuilder_2ecpp_102',·['simulatorbuilder.cpp',·['../simulatorbuilder_8cpp.xhtml',·1,·'']]],
127 ····['simulatorcomparison_2ecpp_103',·['simulatorcomparison.cpp',·['../simulatorcomparison_8cpp.xhtml',·1,·'']]],127 ····['simulatorcomparison_2ecpp_103',·['simulatorcomparison.cpp',·['../simulatorcomparison_8cpp.xhtml',·1,·'']]],
Offset 167, 16 lines modifiedOffset 167, 16 lines modified
167 ····['stringtoenumvalueconverter_2ecpp_141',·['stringtoenumvalueconverter.cpp',·['../stringtoenumvalueconverter_8cpp.xhtml',·1,·'']]],167 ····['stringtoenumvalueconverter_2ecpp_141',·['stringtoenumvalueconverter.cpp',·['../stringtoenumvalueconverter_8cpp.xhtml',·1,·'']]],
168 ····['stringtoenumvalueconverter_2eh_142',·['stringtoenumvalueconverter.h',·['../stringtoenumvalueconverter_8h.xhtml',·1,·'']]],168 ····['stringtoenumvalueconverter_2eh_142',·['stringtoenumvalueconverter.h',·['../stringtoenumvalueconverter_8h.xhtml',·1,·'']]],
169 ····['stringutil_2ecpp_143',·['stringutil.cpp',·['../stringutil_8cpp.xhtml',·1,·'(Global·Namespace)'],169 ····['stringutil_2ecpp_143',·['stringutil.cpp',·['../stringutil_8cpp.xhtml',·1,·'(Global·Namespace)'],
170 ········['../tests_2stringutil_8cpp.xhtml',·1,·'(Global·Namespace)']170 ········['../tests_2stringutil_8cpp.xhtml',·1,·'(Global·Namespace)']
171 ····]],171 ····]],
172 ····['stringutil_2eh_144',·['stringutil.h',·['../stringutil_8h.xhtml',·1,·'']]],172 ····['stringutil_2eh_144',·['stringutil.h',·['../stringutil_8h.xhtml',·1,·'']]],
173 ····['surfacearea_2ecpp_145',·['surfacearea.cpp',·['../tests_2surfacearea_8cpp.xhtml',·1,·'']]],173 ····['surfacearea_2ecpp_145',·['surfacearea.cpp',·['../tests_2surfacearea_8cpp.xhtml',·1,·'']]],
174 ····['swapcoords_2ecpp_146',·['swapcoords.cpp',·['../gromacs_2swap_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)'],174 ····['swapcoords_2ecpp_146',·['swapcoords.cpp',·['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)'],
175 ········['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)']175 ········['../gromacs_2swap_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)']
176 ····]],176 ····]],
177 ····['swapcoords_2eh_147',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]],177 ····['swapcoords_2eh_147',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]],
178 ····['sycl_5fkernel_5futils_2eh_148',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]],178 ····['sycl_5fkernel_5futils_2eh_148',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]],
179 ····['syclutils_2eh_149',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]],179 ····['syclutils_2eh_149',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]],
180 ····['symrec_2ecpp_150',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]],180 ····['symrec_2ecpp_150',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]],
181 ····['symrec_2eh_151',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]],181 ····['symrec_2eh_151',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]],
182 ····['symtab_2ecpp_152',·['symtab.cpp',·['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)'],182 ····['symtab_2ecpp_152',·['symtab.cpp',·['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)'],
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Offset 30, 33 lines modifiedOffset 30, 33 lines modified
30 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']30 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']
31 ····]],31 ····]],
32 ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],32 ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],
33 ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],33 ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],
34 ····['cmdlineinit_2eh_24',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]],34 ····['cmdlineinit_2eh_24',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]],
35 ····['cmdlinemodule_2ecpp_25',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]],35 ····['cmdlinemodule_2ecpp_25',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]],
36 ····['cmdlinemodule_2eh_26',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]],36 ····['cmdlinemodule_2eh_26',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]],
37 ····['cmdlinemodulemanager_2ecpp_27',·['cmdlinemodulemanager.cpp',·['../tests_2cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'],37 ····['cmdlinemodulemanager_2ecpp_27',·['cmdlinemodulemanager.cpp',·['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'],
38 ········['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)']38 ········['../tests_2cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)']
39 ····]],39 ····]],
40 ····['cmdlinemodulemanager_2eh_28',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]],40 ····['cmdlinemodulemanager_2eh_28',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]],
41 ····['cmdlinemodulemanager_5fimpl_2eh_29',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]],41 ····['cmdlinemodulemanager_5fimpl_2eh_29',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]],
42 ····['cmdlinemodulemanagertest_2ecpp_30',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]],42 ····['cmdlinemodulemanagertest_2ecpp_30',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]],
43 ····['cmdlinemodulemanagertest_2eh_31',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]],43 ····['cmdlinemodulemanagertest_2eh_31',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]],
44 ····['cmdlineoptionsmodule_2ecpp_32',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]],44 ····['cmdlineoptionsmodule_2ecpp_32',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]],
45 ····['cmdlineoptionsmodule_2eh_33',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]],45 ····['cmdlineoptionsmodule_2eh_33',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]],
46 ····['cmdlineparser_2ecpp_34',·['cmdlineparser.cpp',·['../cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)'],46 ····['cmdlineparser_2ecpp_34',·['cmdlineparser.cpp',·['../tests_2cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)'],
47 ········['../tests_2cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)']47 ········['../cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)']
48 ····]],48 ····]],
49 ····['cmdlineparser_2eh_35',·['cmdlineparser.h',·['../cmdlineparser_8h.xhtml',·1,·'']]],49 ····['cmdlineparser_2eh_35',·['cmdlineparser.h',·['../cmdlineparser_8h.xhtml',·1,·'']]],
50 ····['cmdlineprogramcontext_2ecpp_36',·['cmdlineprogramcontext.cpp',·['../cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)'],50 ····['cmdlineprogramcontext_2ecpp_36',·['cmdlineprogramcontext.cpp',·['../cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)'],
51 ········['../tests_2cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)']51 ········['../tests_2cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)']
52 ····]],52 ····]],
53 ····['cmdlineprogramcontext_2eh_37',·['cmdlineprogramcontext.h',·['../cmdlineprogramcontext_8h.xhtml',·1,·'']]],53 ····['cmdlineprogramcontext_2eh_37',·['cmdlineprogramcontext.h',·['../cmdlineprogramcontext_8h.xhtml',·1,·'']]],
54 ····['cmdlinerunner_2ecpp_38',·['cmdlinerunner.cpp',·['../cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)'],54 ····['cmdlinerunner_2ecpp_38',·['cmdlinerunner.cpp',·['../tests_2cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)'],
55 ········['../tests_2cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)']55 ········['../cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)']
56 ····]],56 ····]],
57 ····['cmdlinerunner_2eh_39',·['cmdlinerunner.h',·['../cmdlinerunner_8h.xhtml',·1,·'']]],57 ····['cmdlinerunner_2eh_39',·['cmdlinerunner.h',·['../cmdlinerunner_8h.xhtml',·1,·'']]],
58 ····['cmdlinetest_2ecpp_40',·['cmdlinetest.cpp',·['../cmdlinetest_8cpp.xhtml',·1,·'']]],58 ····['cmdlinetest_2ecpp_40',·['cmdlinetest.cpp',·['../cmdlinetest_8cpp.xhtml',·1,·'']]],
59 ····['cmdlinetest_2eh_41',·['cmdlinetest.h',·['../cmdlinetest_8h.xhtml',·1,·'']]],59 ····['cmdlinetest_2eh_41',·['cmdlinetest.h',·['../cmdlinetest_8h.xhtml',·1,·'']]],
60 ····['collect_2eh_42',·['collect.h',·['../collect_8h.xhtml',·1,·'']]],60 ····['collect_2eh_42',·['collect.h',·['../collect_8h.xhtml',·1,·'']]],
61 ····['colvarproxy_5fgromacs_5fversion_2eh_43',·['colvarproxy_gromacs_version.h',·['../colvarproxy__gromacs__version_8h.xhtml',·1,·'']]],61 ····['colvarproxy_5fgromacs_5fversion_2eh_43',·['colvarproxy_gromacs_version.h',·['../colvarproxy__gromacs__version_8h.xhtml',·1,·'']]],
62 ····['colvarproxygromacs_2ecpp_44',·['colvarproxygromacs.cpp',·['../colvarproxygromacs_8cpp.xhtml',·1,·'']]],62 ····['colvarproxygromacs_2ecpp_44',·['colvarproxygromacs.cpp',·['../colvarproxygromacs_8cpp.xhtml',·1,·'']]],
Offset 95, 16 lines modifiedOffset 95, 16 lines modified
95 ····['computeglobalselement_2eh_69',·['computeglobalselement.h',·['../computeglobalselement_8h.xhtml',·1,·'']]],95 ····['computeglobalselement_2eh_69',·['computeglobalselement.h',·['../computeglobalselement_8h.xhtml',·1,·'']]],
96 ····['computemultibodycutoffs_2ecpp_70',·['computemultibodycutoffs.cpp',·['../computemultibodycutoffs_8cpp.xhtml',·1,·'']]],96 ····['computemultibodycutoffs_2ecpp_70',·['computemultibodycutoffs.cpp',·['../computemultibodycutoffs_8cpp.xhtml',·1,·'']]],
97 ····['computemultibodycutoffs_2eh_71',·['computemultibodycutoffs.h',·['../computemultibodycutoffs_8h.xhtml',·1,·'']]],97 ····['computemultibodycutoffs_2eh_71',·['computemultibodycutoffs.h',·['../computemultibodycutoffs_8h.xhtml',·1,·'']]],
98 ····['confio_2ecpp_72',·['confio.cpp',·['../tests_2confio_8cpp.xhtml',·1,·'']]],98 ····['confio_2ecpp_72',·['confio.cpp',·['../tests_2confio_8cpp.xhtml',·1,·'']]],
99 ····['conftest_2ecpp_73',·['conftest.cpp',·['../conftest_8cpp.xhtml',·1,·'']]],99 ····['conftest_2ecpp_73',·['conftest.cpp',·['../conftest_8cpp.xhtml',·1,·'']]],
100 ····['conftest_2eh_74',·['conftest.h',·['../conftest_8h.xhtml',·1,·'']]],100 ····['conftest_2eh_74',·['conftest.h',·['../conftest_8h.xhtml',·1,·'']]],
101 ····['constantacceleration_2ecpp_75',·['constantacceleration.cpp',·['../constantacceleration_8cpp.xhtml',·1,·'']]],101 ····['constantacceleration_2ecpp_75',·['constantacceleration.cpp',·['../constantacceleration_8cpp.xhtml',·1,·'']]],
102 ····['constr_2ecpp_76',·['constr.cpp',·['../constr_8cpp.xhtml',·1,·'(Global·Namespace)'],102 ····['constr_2ecpp_76',·['constr.cpp',·['../tests_2constr_8cpp.xhtml',·1,·'(Global·Namespace)'],
103 ········['../tests_2constr_8cpp.xhtml',·1,·'(Global·Namespace)']103 ········['../constr_8cpp.xhtml',·1,·'(Global·Namespace)']
104 ····]],104 ····]],
105 ····['constr_2eh_77',·['constr.h',·['../constr_8h.xhtml',·1,·'']]],105 ····['constr_2eh_77',·['constr.h',·['../constr_8h.xhtml',·1,·'']]],
106 ····['constraintelement_2ecpp_78',·['constraintelement.cpp',·['../constraintelement_8cpp.xhtml',·1,·'']]],106 ····['constraintelement_2ecpp_78',·['constraintelement.cpp',·['../constraintelement_8cpp.xhtml',·1,·'']]],
107 ····['constraintelement_2eh_79',·['constraintelement.h',·['../constraintelement_8h.xhtml',·1,·'']]],107 ····['constraintelement_2eh_79',·['constraintelement.h',·['../constraintelement_8h.xhtml',·1,·'']]],
108 ····['constrtestdata_2ecpp_80',·['constrtestdata.cpp',·['../constrtestdata_8cpp.xhtml',·1,·'']]],108 ····['constrtestdata_2ecpp_80',·['constrtestdata.cpp',·['../constrtestdata_8cpp.xhtml',·1,·'']]],
109 ····['constrtestdata_2eh_81',·['constrtestdata.h',·['../constrtestdata_8h.xhtml',·1,·'']]],109 ····['constrtestdata_2eh_81',·['constrtestdata.h',·['../constrtestdata_8h.xhtml',·1,·'']]],
110 ····['constrtestrunners_2ecpp_82',·['constrtestrunners.cpp',·['../constrtestrunners_8cpp.xhtml',·1,·'']]],110 ····['constrtestrunners_2ecpp_82',·['constrtestrunners.cpp',·['../constrtestrunners_8cpp.xhtml',·1,·'']]],
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20 ····['decidesimulationworkload_2eh_18',·['decidesimulationworkload.h',·['../decidesimulationworkload_8h.xhtml',·1,·'']]],20 ····['decidesimulationworkload_2eh_18',·['decidesimulationworkload.h',·['../decidesimulationworkload_8h.xhtml',·1,·'']]],
21 ····['defaultinitializationallocator_2ecpp_19',·['defaultinitializationallocator.cpp',·['../defaultinitializationallocator_8cpp.xhtml',·1,·'']]],21 ····['defaultinitializationallocator_2ecpp_19',·['defaultinitializationallocator.cpp',·['../defaultinitializationallocator_8cpp.xhtml',·1,·'']]],
22 ····['defaultinitializationallocator_2eh_20',·['defaultinitializationallocator.h',·['../defaultinitializationallocator_8h.xhtml',·1,·'']]],22 ····['defaultinitializationallocator_2eh_20',·['defaultinitializationallocator.h',·['../defaultinitializationallocator_8h.xhtml',·1,·'']]],
23 ····['densityfit_2ecpp_21',·['densityfit.cpp',·['../densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'],23 ····['densityfit_2ecpp_21',·['densityfit.cpp',·['../densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'],
24 ········['../tests_2densityfit_8cpp.xhtml',·1,·'(Global·Namespace)']24 ········['../tests_2densityfit_8cpp.xhtml',·1,·'(Global·Namespace)']
25 ····]],25 ····]],
26 ····['densityfit_2eh_22',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]],26 ····['densityfit_2eh_22',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]],
27 ····['densityfitting_2ecpp_23',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'],27 ····['densityfitting_2ecpp_23',·['densityfitting.cpp',·['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'],
28 ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)']28 ········['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)']
29 ····]],29 ····]],
30 ····['densityfittingamplitudelookup_2ecpp_24',·['densityfittingamplitudelookup.cpp',·['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],30 ····['densityfittingamplitudelookup_2ecpp_24',·['densityfittingamplitudelookup.cpp',·['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],
31 ········['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']31 ········['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']
32 ····]],32 ····]],
33 ····['densityfittingamplitudelookup_2eh_25',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],33 ····['densityfittingamplitudelookup_2eh_25',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],
34 ····['densityfittingforce_2ecpp_26',·['densityfittingforce.cpp',·['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['densityfittingforce_2ecpp_26',·['densityfittingforce.cpp',·['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],37 ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],
38 ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
40 ····]],40 ····]],
41 ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],41 ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],
42 ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],42 ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],
43 ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],43 ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
44 ········['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']44 ········['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
45 ····]],45 ····]],
46 ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],46 ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],
47 ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],47 ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],
48 ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],48 ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],
49 ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],49 ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],
50 ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]],50 ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]],
51 ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]],51 ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]],
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70 ····['device_5fmanagement_5fsycl_2ecpp_54',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],70 ····['device_5fmanagement_5fsycl_2ecpp_54',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],
71 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_55',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],71 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_55',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],
72 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_56',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],72 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_56',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],
73 ····['device_5fstream_2ecpp_57',·['device_stream.cpp',·['../device__stream_8cpp.xhtml',·1,·'']]],73 ····['device_5fstream_2ecpp_57',·['device_stream.cpp',·['../device__stream_8cpp.xhtml',·1,·'']]],
74 ····['device_5fstream_2eh_58',·['device_stream.h',·['../device__stream_8h.xhtml',·1,·'']]],74 ····['device_5fstream_2eh_58',·['device_stream.h',·['../device__stream_8h.xhtml',·1,·'']]],
75 ····['device_5fstream_5fhip_2ecpp_59',·['device_stream_hip.cpp',·['../device__stream__hip_8cpp.xhtml',·1,·'']]],75 ····['device_5fstream_5fhip_2ecpp_59',·['device_stream_hip.cpp',·['../device__stream__hip_8cpp.xhtml',·1,·'']]],
76 ····['device_5fstream_5fmanager_2ecpp_60',·['device_stream_manager.cpp',·['../tests_2device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['device_5fstream_5fmanager_2ecpp_60',·['device_stream_manager.cpp',·['../device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../tests_2device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['device_5fstream_5fmanager_2eh_61',·['device_stream_manager.h',·['../device__stream__manager_8h.xhtml',·1,·'']]],79 ····['device_5fstream_5fmanager_2eh_61',·['device_stream_manager.h',·['../device__stream__manager_8h.xhtml',·1,·'']]],
80 ····['device_5fstream_5focl_2ecpp_62',·['device_stream_ocl.cpp',·['../device__stream__ocl_8cpp.xhtml',·1,·'']]],80 ····['device_5fstream_5focl_2ecpp_62',·['device_stream_ocl.cpp',·['../device__stream__ocl_8cpp.xhtml',·1,·'']]],
81 ····['device_5fstream_5fsycl_2ecpp_63',·['device_stream_sycl.cpp',·['../device__stream__sycl_8cpp.xhtml',·1,·'']]],81 ····['device_5fstream_5fsycl_2ecpp_63',·['device_stream_sycl.cpp',·['../device__stream__sycl_8cpp.xhtml',·1,·'']]],
82 ····['devicebuffer_2eh_64',·['devicebuffer.h',·['../devicebuffer_8h.xhtml',·1,·'']]],82 ····['devicebuffer_2eh_64',·['devicebuffer.h',·['../devicebuffer_8h.xhtml',·1,·'']]],
83 ····['devicebuffer_5fdatatype_2eh_65',·['devicebuffer_datatype.h',·['../devicebuffer__datatype_8h.xhtml',·1,·'']]],83 ····['devicebuffer_5fdatatype_2eh_65',·['devicebuffer_datatype.h',·['../devicebuffer__datatype_8h.xhtml',·1,·'']]],
84 ····['devicebuffer_5fhip_2eh_66',·['devicebuffer_hip.h',·['../devicebuffer__hip_8h.xhtml',·1,·'']]],84 ····['devicebuffer_5fhip_2eh_66',·['devicebuffer_hip.h',·['../devicebuffer__hip_8h.xhtml',·1,·'']]],
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124 ····['domdec_5fvsite_2ecpp_104',·['domdec_vsite.cpp',·['../domdec__vsite_8cpp.xhtml',·1,·'']]],124 ····['domdec_5fvsite_2ecpp_104',·['domdec_vsite.cpp',·['../domdec__vsite_8cpp.xhtml',·1,·'']]],
125 ····['domdec_5fvsite_2eh_105',·['domdec_vsite.h',·['../domdec__vsite_8h.xhtml',·1,·'']]],125 ····['domdec_5fvsite_2eh_105',·['domdec_vsite.h',·['../domdec__vsite_8h.xhtml',·1,·'']]],
126 ····['domdec_5fzones_2ecpp_106',·['domdec_zones.cpp',·['../domdec__zones_8cpp.xhtml',·1,·'']]],126 ····['domdec_5fzones_2ecpp_106',·['domdec_zones.cpp',·['../domdec__zones_8cpp.xhtml',·1,·'']]],
127 ····['domdec_5fzones_2eh_107',·['domdec_zones.h',·['../domdec__zones_8h.xhtml',·1,·'']]],127 ····['domdec_5fzones_2eh_107',·['domdec_zones.h',·['../domdec__zones_8h.xhtml',·1,·'']]],
128 ····['domdechelper_2ecpp_108',·['domdechelper.cpp',·['../domdechelper_8cpp.xhtml',·1,·'']]],128 ····['domdechelper_2ecpp_108',·['domdechelper.cpp',·['../domdechelper_8cpp.xhtml',·1,·'']]],
129 ····['domdechelper_2eh_109',·['domdechelper.h',·['../domdechelper_8h.xhtml',·1,·'']]],129 ····['domdechelper_2eh_109',·['domdechelper.h',·['../domdechelper_8h.xhtml',·1,·'']]],
130 ····['dssp_2ecpp_110',·['dssp.cpp',·['../tests_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)'],130 ····['dssp_2ecpp_110',·['dssp.cpp',·['../modules_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)'],
131 ········['../modules_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)']131 ········['../tests_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)']
132 ····]],132 ····]],
133 ····['dssp_2eh_111',·['dssp.h',·['../dssp_8h.xhtml',·1,·'']]],133 ····['dssp_2eh_111',·['dssp.h',·['../dssp_8h.xhtml',·1,·'']]],
134 ····['dump_2ecpp_112',·['dump.cpp',·['../tools_2tests_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'],134 ····['dump_2ecpp_112',·['dump.cpp',·['../domdec_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'],
135 ········['../tools_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'],135 ········['../tools_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'],
136 ········['../domdec_2dump_8cpp.xhtml',·1,·'(Global·Namespace)']136 ········['../tools_2tests_2dump_8cpp.xhtml',·1,·'(Global·Namespace)']
137 ····]],137 ····]],
138 ····['dump_2eh_113',·['dump.h',·['../domdec_2dump_8h.xhtml',·1,·'']]]138 ····['dump_2eh_113',·['dump.h',·['../domdec_2dump_8h.xhtml',·1,·'']]]
139 ];139 ];
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7 ····['electricfield_2eh_3',·['electricfield.h',·['../electricfield_8h.xhtml',·1,·'']]],7 ····['electricfield_2eh_3',·['electricfield.h',·['../electricfield_8h.xhtml',·1,·'']]],
8 ····['enerdata_2ecpp_4',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],8 ····['enerdata_2ecpp_4',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],
9 ····['energyanalysisframe_2eh_5',·['energyanalysisframe.h',·['../energyanalysisframe_8h.xhtml',·1,·'']]],9 ····['energyanalysisframe_2eh_5',·['energyanalysisframe.h',·['../energyanalysisframe_8h.xhtml',·1,·'']]],
10 ····['energycomparison_2ecpp_6',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],10 ····['energycomparison_2ecpp_6',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],
11 ····['energycomparison_2eh_7',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],11 ····['energycomparison_2eh_7',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],
12 ····['energydata_2ecpp_8',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],12 ····['energydata_2ecpp_8',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],
13 ····['energydata_2eh_9',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],13 ····['energydata_2eh_9',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],
14 ····['energydrifttracker_2ecpp_10',·['energydrifttracker.cpp',·['../energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)'],14 ····['energydrifttracker_2ecpp_10',·['energydrifttracker.cpp',·['../tests_2energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)'],
15 ········['../tests_2energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)']15 ········['../energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)']
16 ····]],16 ····]],
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18 ····['energyframe_2ecpp_12',·['energyframe.cpp',·['../energyframe_8cpp.xhtml',·1,·'']]],18 ····['energyframe_2ecpp_12',·['energyframe.cpp',·['../energyframe_8cpp.xhtml',·1,·'']]],
19 ····['energyhistory_2eh_13',·['energyhistory.h',·['../energyhistory_8h.xhtml',·1,·'']]],19 ····['energyhistory_2eh_13',·['energyhistory.h',·['../energyhistory_8h.xhtml',·1,·'']]],
20 ····['energyoutput_2ecpp_14',·['energyoutput.cpp',·['../tests_2energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)'],20 ····['energyoutput_2ecpp_14',·['energyoutput.cpp',·['../energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)'],
21 ········['../energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)']21 ········['../tests_2energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)']
22 ····]],22 ····]],
23 ····['energyoutput_2eh_15',·['energyoutput.h',·['../energyoutput_8h.xhtml',·1,·'']]],23 ····['energyoutput_2eh_15',·['energyoutput.h',·['../energyoutput_8h.xhtml',·1,·'']]],
24 ····['energyreader_2ecpp_16',·['energyreader.cpp',·['../energyreader_8cpp.xhtml',·1,·'']]],24 ····['energyreader_2ecpp_16',·['energyreader.cpp',·['../energyreader_8cpp.xhtml',·1,·'']]],
25 ····['energyreader_2eh_17',·['energyreader.h',·['../energyreader_8h.xhtml',·1,·'']]],25 ····['energyreader_2eh_17',·['energyreader.h',·['../energyreader_8h.xhtml',·1,·'']]],
26 ····['energyterm_2ecpp_18',·['energyterm.cpp',·['../tests_2energyterm_8cpp.xhtml',·1,·'(Global·Namespace)'],26 ····['energyterm_2ecpp_18',·['energyterm.cpp',·['../tests_2energyterm_8cpp.xhtml',·1,·'(Global·Namespace)'],
27 ········['../energyterm_8cpp.xhtml',·1,·'(Global·Namespace)']27 ········['../energyterm_8cpp.xhtml',·1,·'(Global·Namespace)']
28 ····]],28 ····]],
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17 ········['../modules_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)']17 ········['../modules_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)']
18 ····]],18 ····]],
19 ····['hbond_2eh_13',·['hbond.h',·['../hbond_8h.xhtml',·1,·'']]],19 ····['hbond_2eh_13',·['hbond.h',·['../hbond_8h.xhtml',·1,·'']]],
20 ····['helpformat_2ecpp_14',·['helpformat.cpp',·['../tests_2helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'],20 ····['helpformat_2ecpp_14',·['helpformat.cpp',·['../tests_2helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'],
21 ········['../helpformat_8cpp.xhtml',·1,·'(Global·Namespace)']21 ········['../helpformat_8cpp.xhtml',·1,·'(Global·Namespace)']
22 ····]],22 ····]],
23 ····['helpformat_2eh_15',·['helpformat.h',·['../helpformat_8h.xhtml',·1,·'']]],23 ····['helpformat_2eh_15',·['helpformat.h',·['../helpformat_8h.xhtml',·1,·'']]],
24 ····['helpmanager_2ecpp_16',·['helpmanager.cpp',·['../tests_2helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'],24 ····['helpmanager_2ecpp_16',·['helpmanager.cpp',·['../helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'],
25 ········['../helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)']25 ········['../tests_2helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)']
26 ····]],26 ····]],
27 ····['helpmanager_2eh_17',·['helpmanager.h',·['../helpmanager_8h.xhtml',·1,·'']]],27 ····['helpmanager_2eh_17',·['helpmanager.h',·['../helpmanager_8h.xhtml',·1,·'']]],
28 ····['helptopic_2ecpp_18',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]],28 ····['helptopic_2ecpp_18',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]],
29 ····['helptopic_2eh_19',·['helptopic.h',·['../helptopic_8h.xhtml',·1,·'']]],29 ····['helptopic_2eh_19',·['helptopic.h',·['../helptopic_8h.xhtml',·1,·'']]],
30 ····['helpwritercontext_2ecpp_20',·['helpwritercontext.cpp',·['../helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'],30 ····['helpwritercontext_2ecpp_20',·['helpwritercontext.cpp',·['../tests_2helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'],
31 ········['../tests_2helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)']31 ········['../helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)']
32 ····]],32 ····]],
33 ····['helpwritercontext_2eh_21',·['helpwritercontext.h',·['../helpwritercontext_8h.xhtml',·1,·'']]],33 ····['helpwritercontext_2eh_21',·['helpwritercontext.h',·['../helpwritercontext_8h.xhtml',·1,·'']]],
34 ····['helpwriting_2ecpp_22',·['helpwriting.cpp',·['../programs_2mdrun_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['helpwriting_2ecpp_22',·['helpwriting.cpp',·['../gromacs_2tools_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../gromacs_2tools_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../programs_2mdrun_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['hip_5fkernel_5futils_2eh_23',·['hip_kernel_utils.h',·['../hip__kernel__utils_8h.xhtml',·1,·'']]],37 ····['hip_5fkernel_5futils_2eh_23',·['hip_kernel_utils.h',·['../hip__kernel__utils_8h.xhtml',·1,·'']]],
38 ····['hip_5fsycl_5fkernel_5futils_2eh_24',·['hip_sycl_kernel_utils.h',·['../hip__sycl__kernel__utils_8h.xhtml',·1,·'']]],38 ····['hip_5fsycl_5fkernel_5futils_2eh_24',·['hip_sycl_kernel_utils.h',·['../hip__sycl__kernel__utils_8h.xhtml',·1,·'']]],
39 ····['histogram_2ecpp_25',·['histogram.cpp',·['../tests_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)'],39 ····['histogram_2ecpp_25',·['histogram.cpp',·['../tests_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)'],
40 ········['../modules_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)']40 ········['../modules_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)']
41 ····]],41 ····]],
42 ····['histogram_2eh_26',·['histogram.h',·['../histogram_8h.xhtml',·1,·'']]],42 ····['histogram_2eh_26',·['histogram.h',·['../histogram_8h.xhtml',·1,·'']]],
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Offset 39, 16 lines modifiedOffset 39, 16 lines modified
39 ····['message_5fstring_5fcollector_2ecpp_33',·['message_string_collector.cpp',·['../tests_2message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)'],39 ····['message_5fstring_5fcollector_2ecpp_33',·['message_string_collector.cpp',·['../tests_2message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)'],
40 ········['../message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)']40 ········['../message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)']
41 ····]],41 ····]],
42 ····['message_5fstring_5fcollector_2eh_34',·['message_string_collector.h',·['../message__string__collector_8h.xhtml',·1,·'']]],42 ····['message_5fstring_5fcollector_2eh_34',·['message_string_collector.h',·['../message__string__collector_8h.xhtml',·1,·'']]],
43 ····['mimic_2ecpp_35',·['mimic.cpp',·['../gromacs_2mdrun_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)'],43 ····['mimic_2ecpp_35',·['mimic.cpp',·['../gromacs_2mdrun_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)'],
44 ········['../programs_2mdrun_2tests_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)']44 ········['../programs_2mdrun_2tests_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)']
45 ····]],45 ····]],
46 ····['minimize_2ecpp_36',·['minimize.cpp',·['../programs_2mdrun_2tests_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)'],46 ····['minimize_2ecpp_36',·['minimize.cpp',·['../gromacs_2mdrun_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)'],
47 ········['../gromacs_2mdrun_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)']47 ········['../programs_2mdrun_2tests_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)']
48 ····]],48 ····]],
49 ····['misc_2ecpp_37',·['misc.cpp',·['../misc_8cpp.xhtml',·1,·'']]],49 ····['misc_2ecpp_37',·['misc.cpp',·['../misc_8cpp.xhtml',·1,·'']]],
50 ····['mock_5fdatamodule_2ecpp_38',·['mock_datamodule.cpp',·['../mock__datamodule_8cpp.xhtml',·1,·'']]],50 ····['mock_5fdatamodule_2ecpp_38',·['mock_datamodule.cpp',·['../mock__datamodule_8cpp.xhtml',·1,·'']]],
51 ····['mock_5fdatamodule_2eh_39',·['mock_datamodule.h',·['../mock__datamodule_8h.xhtml',·1,·'']]],51 ····['mock_5fdatamodule_2eh_39',·['mock_datamodule.h',·['../mock__datamodule_8h.xhtml',·1,·'']]],
52 ····['mock_5fhelptopic_2ecpp_40',·['mock_helptopic.cpp',·['../mock__helptopic_8cpp.xhtml',·1,·'']]],52 ····['mock_5fhelptopic_2ecpp_40',·['mock_helptopic.cpp',·['../mock__helptopic_8cpp.xhtml',·1,·'']]],
53 ····['mock_5fhelptopic_2eh_41',·['mock_helptopic.h',·['../mock__helptopic_8h.xhtml',·1,·'']]],53 ····['mock_5fhelptopic_2eh_41',·['mock_helptopic.h',·['../mock__helptopic_8h.xhtml',·1,·'']]],
54 ····['mockhardwaretopology_2ecpp_42',·['mockhardwaretopology.cpp',·['../mockhardwaretopology_8cpp.xhtml',·1,·'']]],54 ····['mockhardwaretopology_2ecpp_42',·['mockhardwaretopology.cpp',·['../mockhardwaretopology_8cpp.xhtml',·1,·'']]],
Offset 65, 20 lines modifiedOffset 65, 20 lines modified
65 ····]],65 ····]],
66 ····['mp11_2eh_50',·['mp11.h',·['../mp11_8h.xhtml',·1,·'']]],66 ····['mp11_2eh_50',·['mp11.h',·['../mp11_8h.xhtml',·1,·'']]],
67 ····['mpi_5fprinter_2eh_51',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]],67 ····['mpi_5fprinter_2eh_51',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]],
68 ····['mpitest_2ecpp_52',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'],68 ····['mpitest_2ecpp_52',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'],
69 ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)']69 ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)']
70 ····]],70 ····]],
71 ····['mpitest_2eh_53',·['mpitest.h',·['../mpitest_8h.xhtml',·1,·'']]],71 ····['mpitest_2eh_53',·['mpitest.h',·['../mpitest_8h.xhtml',·1,·'']]],
72 ····['mrcdensitymap_2ecpp_54',·['mrcdensitymap.cpp',·['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'],72 ····['mrcdensitymap_2ecpp_54',·['mrcdensitymap.cpp',·['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'],
73 ········['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']73 ········['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']
74 ····]],74 ····]],
75 ····['mrcdensitymap_2eh_55',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],75 ····['mrcdensitymap_2eh_55',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],
76 ····['mrcdensitymapheader_2ecpp_56',·['mrcdensitymapheader.cpp',·['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['mrcdensitymapheader_2ecpp_56',·['mrcdensitymapheader.cpp',·['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['mrcdensitymapheader_2eh_57',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],79 ····['mrcdensitymapheader_2eh_57',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],
80 ····['mrcserializer_2ecpp_58',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],80 ····['mrcserializer_2ecpp_58',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],
81 ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']81 ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']
82 ····]],82 ····]],
83 ····['mrcserializer_2eh_59',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],83 ····['mrcserializer_2eh_59',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],
84 ····['msd_2ecpp_60',·['msd.cpp',·['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'],84 ····['msd_2ecpp_60',·['msd.cpp',·['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'],
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Offset 63, 31 lines modifiedOffset 63, 31 lines modified
63 ····['neldermead_2eh_57',·['neldermead.h',·['../neldermead_8h.xhtml',·1,·'']]],63 ····['neldermead_2eh_57',·['neldermead.h',·['../neldermead_8h.xhtml',·1,·'']]],
64 ····['niceheader_2ecpp_58',·['niceheader.cpp',·['../niceheader_8cpp.xhtml',·1,·'']]],64 ····['niceheader_2ecpp_58',·['niceheader.cpp',·['../niceheader_8cpp.xhtml',·1,·'']]],
65 ····['niceheader_2eh_59',·['niceheader.h',·['../niceheader_8h.xhtml',·1,·'']]],65 ····['niceheader_2eh_59',·['niceheader.h',·['../niceheader_8h.xhtml',·1,·'']]],
66 ····['nnpot_2ecpp_60',·['nnpot.cpp',·['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],66 ····['nnpot_2ecpp_60',·['nnpot.cpp',·['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],
67 ········['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']67 ········['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']
68 ····]],68 ····]],
69 ····['nnpot_2eh_61',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],69 ····['nnpot_2eh_61',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],
70 ····['nnpotforceprovider_2ecpp_62',·['nnpotforceprovider.cpp',·['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],70 ····['nnpotforceprovider_2ecpp_62',·['nnpotforceprovider.cpp',·['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
71 ········['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']71 ········['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
72 ····]],72 ····]],
73 ····['nnpotforceprovider_2eh_63',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],73 ····['nnpotforceprovider_2eh_63',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],
74 ····['nnpotforceprovider_5fstub_2ecpp_64',·['nnpotforceprovider_stub.cpp',·['../nnpotforceprovider__stub_8cpp.xhtml',·1,·'']]],74 ····['nnpotforceprovider_5fstub_2ecpp_64',·['nnpotforceprovider_stub.cpp',·['../nnpotforceprovider__stub_8cpp.xhtml',·1,·'']]],
75 ····['nnpotmodel_2eh_65',·['nnpotmodel.h',·['../nnpotmodel_8h.xhtml',·1,·'']]],75 ····['nnpotmodel_2eh_65',·['nnpotmodel.h',·['../nnpotmodel_8h.xhtml',·1,·'']]],
76 ····['nnpotoptions_2ecpp_66',·['nnpotoptions.cpp',·['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['nnpotoptions_2ecpp_66',·['nnpotoptions.cpp',·['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['nnpotoptions_2eh_67',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],79 ····['nnpotoptions_2eh_67',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],
80 ····['nnpottopologypreprocessor_2ecpp_68',·['nnpottopologypreprocessor.cpp',·['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],80 ····['nnpottopologypreprocessor_2ecpp_68',·['nnpottopologypreprocessor.cpp',·['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
81 ········['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']81 ········['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
82 ····]],82 ····]],
83 ····['nnpottopologypreprocessor_2eh_69',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],83 ····['nnpottopologypreprocessor_2eh_69',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],
84 ····['nodelete_2eh_70',·['nodelete.h',·['../nodelete_8h.xhtml',·1,·'']]],84 ····['nodelete_2eh_70',·['nodelete.h',·['../nodelete_8h.xhtml',·1,·'']]],
85 ····['nonbonded_5fbench_2ecpp_71',·['nonbonded_bench.cpp',·['../tests_2nonbonded__bench_8cpp.xhtml',·1,·'(Global·Namespace)'],85 ····['nonbonded_5fbench_2ecpp_71',·['nonbonded_bench.cpp',·['../nonbonded__bench_8cpp.xhtml',·1,·'(Global·Namespace)'],
86 ········['../nonbonded__bench_8cpp.xhtml',·1,·'(Global·Namespace)']86 ········['../tests_2nonbonded__bench_8cpp.xhtml',·1,·'(Global·Namespace)']
87 ····]],87 ····]],
88 ····['nonbonded_5fbench_2eh_72',·['nonbonded_bench.h',·['../nonbonded__bench_8h.xhtml',·1,·'']]],88 ····['nonbonded_5fbench_2eh_72',·['nonbonded_bench.h',·['../nonbonded__bench_8h.xhtml',·1,·'']]],
89 ····['normaldistribution_2ecpp_73',·['normaldistribution.cpp',·['../normaldistribution_8cpp.xhtml',·1,·'']]],89 ····['normaldistribution_2ecpp_73',·['normaldistribution.cpp',·['../normaldistribution_8cpp.xhtml',·1,·'']]],
90 ····['normaldistribution_2eh_74',·['normaldistribution.h',·['../normaldistribution_8h.xhtml',·1,·'']]],90 ····['normaldistribution_2eh_74',·['normaldistribution.h',·['../normaldistribution_8h.xhtml',·1,·'']]],
91 ····['normalmodes_2ecpp_75',·['normalmodes.cpp',·['../normalmodes_8cpp.xhtml',·1,·'']]],91 ····['normalmodes_2ecpp_75',·['normalmodes.cpp',·['../normalmodes_8cpp.xhtml',·1,·'']]],
92 ····['nosehooverchains_2ecpp_76',·['nosehooverchains.cpp',·['../nosehooverchains_8cpp.xhtml',·1,·'']]],92 ····['nosehooverchains_2ecpp_76',·['nosehooverchains.cpp',·['../nosehooverchains_8cpp.xhtml',·1,·'']]],
93 ····['nosehooverchains_2eh_77',·['nosehooverchains.h',·['../nosehooverchains_8h.xhtml',·1,·'']]],93 ····['nosehooverchains_2eh_77',·['nosehooverchains.h',·['../nosehooverchains_8h.xhtml',·1,·'']]],
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Offset 1, 12 lines modifiedOffset 1, 12 lines modified
1 var·searchData·=·[1 var·searchData·=·[
2 ····['paddedvector_2ecpp_0',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]],2 ····['paddedvector_2ecpp_0',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]],
3 ····['paddedvector_2eh_1',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]],3 ····['paddedvector_2eh_1',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]],
4 ····['pairdist_2ecpp_2',·['pairdist.cpp',·['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'],4 ····['pairdist_2ecpp_2',·['pairdist.cpp',·['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'],
5 ········['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)']5 ········['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)']
6 ····]],6 ····]],
7 ····['pairdist_2eh_3',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]],7 ····['pairdist_2eh_3',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]],
8 ····['pairlist_2ecpp_4',·['pairlist.cpp',·['../tests_2pairlist_8cpp.xhtml',·1,·'']]],8 ····['pairlist_2ecpp_4',·['pairlist.cpp',·['../tests_2pairlist_8cpp.xhtml',·1,·'']]],
9 ····['pairlist_5fimask_2eh_5',·['pairlist_imask.h',·['../pairlist__imask_8h.xhtml',·1,·'']]],9 ····['pairlist_5fimask_2eh_5',·['pairlist_imask.h',·['../pairlist__imask_8h.xhtml',·1,·'']]],
10 ····['pairlist_5fsimd_5fkernel_2ecpp_6',·['pairlist_simd_kernel.cpp',·['../pairlist__simd__kernel_8cpp.xhtml',·1,·'']]],10 ····['pairlist_5fsimd_5fkernel_2ecpp_6',·['pairlist_simd_kernel.cpp',·['../pairlist__simd__kernel_8cpp.xhtml',·1,·'']]],
11 ····['pairlist_5fsimd_5fkernel_2eh_7',·['pairlist_simd_kernel.h',·['../pairlist__simd__kernel_8h.xhtml',·1,·'']]],11 ····['pairlist_5fsimd_5fkernel_2eh_7',·['pairlist_simd_kernel.h',·['../pairlist__simd__kernel_8h.xhtml',·1,·'']]],
12 ····['pairlist_5ftuning_2ecpp_8',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]],12 ····['pairlist_5ftuning_2ecpp_8',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]],
Offset 35, 23 lines modifiedOffset 35, 23 lines modified
35 ····['parsetree_2eh_29',·['parsetree.h',·['../parsetree_8h.xhtml',·1,·'']]],35 ····['parsetree_2eh_29',·['parsetree.h',·['../parsetree_8h.xhtml',·1,·'']]],
36 ····['partition_2ecpp_30',·['partition.cpp',·['../partition_8cpp.xhtml',·1,·'']]],36 ····['partition_2ecpp_30',·['partition.cpp',·['../partition_8cpp.xhtml',·1,·'']]],
37 ····['partition_2eh_31',·['partition.h',·['../partition_8h.xhtml',·1,·'']]],37 ····['partition_2eh_31',·['partition.h',·['../partition_8h.xhtml',·1,·'']]],
38 ····['path_2ecpp_32',·['path.cpp',·['../path_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['path_2ecpp_32',·['path.cpp',·['../path_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../tests_2path_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../tests_2path_8cpp.xhtml',·1,·'(Global·Namespace)']
40 ····]],40 ····]],
41 ····['path_2eh_33',·['path.h',·['../path_8h.xhtml',·1,·'']]],41 ····['path_2eh_33',·['path.h',·['../path_8h.xhtml',·1,·'']]],
42 ····['pbc_2ecpp_34',·['pbc.cpp',·['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],42 ····['pbc_2ecpp_34',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],
43 ········['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)']43 ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)']
44 ····]],44 ····]],
45 ····['pbc_5faiuc_2eh_35',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],45 ····['pbc_5faiuc_2eh_35',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],
46 ····['pbc_5faiuc_5fsycl_2eh_36',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],46 ····['pbc_5faiuc_5fsycl_2eh_36',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],
47 ····['pbc_5fsimd_2ecpp_37',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]],47 ····['pbc_5fsimd_2ecpp_37',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]],
48 ····['pbc_5fsimd_2eh_38',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]],48 ····['pbc_5fsimd_2eh_38',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]],
49 ····['pbcenums_2ecpp_39',·['pbcenums.cpp',·['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'],49 ····['pbcenums_2ecpp_39',·['pbcenums.cpp',·['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'],
50 ········['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)']50 ········['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)']
51 ····]],51 ····]],
52 ····['pbcenums_2eh_40',·['pbcenums.h',·['../pbcenums_8h.xhtml',·1,·'']]],52 ····['pbcenums_2eh_40',·['pbcenums.h',·['../pbcenums_8h.xhtml',·1,·'']]],
53 ····['pdb2gmx_2ecpp_41',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]],53 ····['pdb2gmx_2ecpp_41',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]],
54 ····['periodicactions_2ecpp_42',·['periodicactions.cpp',·['../periodicactions_8cpp.xhtml',·1,·'']]],54 ····['periodicactions_2ecpp_42',·['periodicactions.cpp',·['../periodicactions_8cpp.xhtml',·1,·'']]],
55 ····['periodicactions_2eh_43',·['periodicactions.h',·['../periodicactions_8h.xhtml',·1,·'']]],55 ····['periodicactions_2eh_43',·['periodicactions.h',·['../periodicactions_8h.xhtml',·1,·'']]],
56 ····['periodicactions_5fbasic_2ecpp_44',·['periodicactions_basic.cpp',·['../periodicactions__basic_8cpp.xhtml',·1,·'']]],56 ····['periodicactions_5fbasic_2ecpp_44',·['periodicactions_basic.cpp',·['../periodicactions__basic_8cpp.xhtml',·1,·'']]],
57 ····['periodicactions_5fconstraints_2ecpp_45',·['periodicactions_constraints.cpp',·['../periodicactions__constraints_8cpp.xhtml',·1,·'']]],57 ····['periodicactions_5fconstraints_2ecpp_45',·['periodicactions_constraints.cpp',·['../periodicactions__constraints_8cpp.xhtml',·1,·'']]],
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Offset 12, 15 lines modifiedOffset 12, 15 lines modified
12 ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']12 ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']
13 ····]],13 ····]],
14 ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],14 ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],
15 ····['qmmmoptions_2ecpp_7',·['qmmmoptions.cpp',·['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],15 ····['qmmmoptions_2ecpp_7',·['qmmmoptions.cpp',·['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
16 ········['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']16 ········['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
17 ····]],17 ····]],
18 ····['qmmmoptions_2eh_8',·['qmmmoptions.h',·['../qmmmoptions_8h.xhtml',·1,·'']]],18 ····['qmmmoptions_2eh_8',·['qmmmoptions.h',·['../qmmmoptions_8h.xhtml',·1,·'']]],
19 ····['qmmmtopologypreprocessor_2ecpp_9',·['qmmmtopologypreprocessor.cpp',·['../tests_2qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],19 ····['qmmmtopologypreprocessor_2ecpp_9',·['qmmmtopologypreprocessor.cpp',·['../qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
20 ········['../qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']20 ········['../tests_2qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
21 ····]],21 ····]],
22 ····['qmmmtopologypreprocessor_2eh_10',·['qmmmtopologypreprocessor.h',·['../qmmmtopologypreprocessor_8h.xhtml',·1,·'']]],22 ····['qmmmtopologypreprocessor_2eh_10',·['qmmmtopologypreprocessor.h',·['../qmmmtopologypreprocessor_8h.xhtml',·1,·'']]],
23 ····['qmmmtypes_2eh_11',·['qmmmtypes.h',·['../qmmmtypes_8h.xhtml',·1,·'']]],23 ····['qmmmtypes_2eh_11',·['qmmmtypes.h',·['../qmmmtypes_8h.xhtml',·1,·'']]],
24 ····['quadraticsplinetable_2ecpp_12',·['quadraticsplinetable.cpp',·['../quadraticsplinetable_8cpp.xhtml',·1,·'']]],24 ····['quadraticsplinetable_2ecpp_12',·['quadraticsplinetable.cpp',·['../quadraticsplinetable_8cpp.xhtml',·1,·'']]],
25 ····['quadraticsplinetable_2eh_13',·['quadraticsplinetable.h',·['../quadraticsplinetable_8h.xhtml',·1,·'']]]25 ····['quadraticsplinetable_2eh_13',·['quadraticsplinetable.h',·['../quadraticsplinetable_8h.xhtml',·1,·'']]]
26 ];26 ];
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Offset 595, 22 lines modifiedOffset 595, 22 lines modified
595 ····['simd_20intrinsics_20interface_20simd_392',·['SIMD·intrinsics·interface·(simd)',·['../group__module__simd.xhtml',·1,·'']]],595 ····['simd_20intrinsics_20interface_20simd_392',·['SIMD·intrinsics·interface·(simd)',·['../group__module__simd.xhtml',·1,·'']]],
596 ····['simd_20math_20library_393',·['The·SIMD·math·library',·['../page_simd.xhtml#autotoc_md70',·1,·'']]],596 ····['simd_20math_20library_393',·['The·SIMD·math·library',·['../page_simd.xhtml#autotoc_md70',·1,·'']]],
597 ····['simd_20module_394',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]],597 ····['simd_20module_394',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]],
598 ····['simd_20preprocessor_20macros_395',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]],598 ····['simd_20preprocessor_20macros_395',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]],
599 ····['simd_2eh_396',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]],599 ····['simd_2eh_396',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]],
600 ····['simd4_20implementation_397',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]],600 ····['simd4_20implementation_397',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]],
601 ····['simd4bool_398',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]],601 ····['simd4bool_398',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]],
602 ····['simd4dbool_399',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool'], 
603 ········['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()']602 ····['simd4dbool_399',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()'],
 603 ········['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool']
604 ····]],604 ····]],
605 ····['simd4double_400',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'], 
606 ········['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()']605 ····['simd4double_400',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()'],
 606 ········['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double']
607 ····]],607 ····]],
608 ····['simd4fbool_401',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool'], 
609 ········['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()']608 ····['simd4fbool_401',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()'],
 609 ········['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool']
610 ····]],610 ····]],
611 ····['simd4float_402',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'],611 ····['simd4float_402',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'],
612 ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float']612 ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float']
613 ····]],613 ····]],
614 ····['simd4n_20implementation_403',·['SIMD4N·implementation',·['../page_simd.xhtml#autotoc_md65',·1,·'']]],614 ····['simd4n_20implementation_403',·['SIMD4N·implementation',·['../page_simd.xhtml#autotoc_md65',·1,·'']]],
615 ····['simd4real_404',·['Simd4Real',·['../namespacegmx.xhtml#a37686b0c2ec48a361d6c4473c1fdb70c',·1,·'gmx']]],615 ····['simd4real_404',·['Simd4Real',·['../namespacegmx.xhtml#a37686b0c2ec48a361d6c4473c1fdb70c',·1,·'gmx']]],
616 ····['simd4setzerod_405',·['simd4SetZeroD',·['../group__module__simd.xhtml#gac88aa19e4c856c2333bf814c3521c488',·1,·'gmx']]],616 ····['simd4setzerod_405',·['simd4SetZeroD',·['../group__module__simd.xhtml#gac88aa19e4c856c2333bf814c3521c488',·1,·'gmx']]],
Offset 618, 16 lines modifiedOffset 618, 16 lines modified
618 ····['simd_5fmath_2eh_407',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]],618 ····['simd_5fmath_2eh_407',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]],
619 ····['simd_5fmemory_2eh_408',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]],619 ····['simd_5fmemory_2eh_408',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]],
620 ····['simd_5fsupport_2eh_409',·['simd_support.h',·['../simd__support_8h.xhtml',·1,·'']]],620 ····['simd_5fsupport_2eh_409',·['simd_support.h',·['../simd__support_8h.xhtml',·1,·'']]],
621 ····['simd_5fwidth_410',·['simd_width',·['../namespacegmx.xhtml#ad2defc5df98b53733b2d299c76788b05',·1,·'gmx']]],621 ····['simd_5fwidth_410',·['simd_width',·['../namespacegmx.xhtml#ad2defc5df98b53733b2d299c76788b05',·1,·'gmx']]],
622 ····['simdbitmask_411',·['SimdBitMask',·['../namespacegmx.xhtml#afb42c13ecb6e9bac5d3b89e89143257f',·1,·'gmx']]],622 ····['simdbitmask_411',·['SimdBitMask',·['../namespacegmx.xhtml#afb42c13ecb6e9bac5d3b89e89143257f',·1,·'gmx']]],
623 ····['simdbool_412',·['SimdBool',·['../namespacegmx.xhtml#a307172d59a1a7c9ed87bc2cb4df83efa',·1,·'gmx']]],623 ····['simdbool_412',·['SimdBool',·['../namespacegmx.xhtml#a307172d59a1a7c9ed87bc2cb4df83efa',·1,·'gmx']]],
624 ····['simdcheck_413',·['simdCheck',·['../namespacegmx.xhtml#a3dfaae36144016a6b9ef7524dfbbb815',·1,·'gmx']]],624 ····['simdcheck_413',·['simdCheck',·['../namespacegmx.xhtml#a3dfaae36144016a6b9ef7524dfbbb815',·1,·'gmx']]],
625 ····['simddbool_414',·['simddbool',·['../classgmx_1_1SimdDBool.xhtml',·1,·'gmx::SimdDBool'], 
626 ········['../classgmx_1_1SimdDBool.xhtml#ad4d8f87a8e48ad39d6600c271dc37a02',·1,·'gmx::SimdDBool::SimdDBool()']625 ····['simddbool_414',·['simddbool',·['../classgmx_1_1SimdDBool.xhtml#ad4d8f87a8e48ad39d6600c271dc37a02',·1,·'gmx::SimdDBool::SimdDBool()'],
 626 ········['../classgmx_1_1SimdDBool.xhtml',·1,·'gmx::SimdDBool']
627 ····]],627 ····]],
628 ····['simddibool_415',·['simddibool',·['../classgmx_1_1SimdDIBool.xhtml',·1,·'gmx::SimdDIBool'],628 ····['simddibool_415',·['simddibool',·['../classgmx_1_1SimdDIBool.xhtml',·1,·'gmx::SimdDIBool'],
629 ········['../classgmx_1_1SimdDIBool.xhtml#a9b76cf7d82509f3f7adeac5d7f1b1477',·1,·'gmx::SimdDIBool::SimdDIBool()']629 ········['../classgmx_1_1SimdDIBool.xhtml#a9b76cf7d82509f3f7adeac5d7f1b1477',·1,·'gmx::SimdDIBool::SimdDIBool()']
630 ····]],630 ····]],
631 ····['simddint32_416',·['simddint32',·['../classgmx_1_1SimdDInt32.xhtml',·1,·'gmx::SimdDInt32'],631 ····['simddint32_416',·['simddint32',·['../classgmx_1_1SimdDInt32.xhtml',·1,·'gmx::SimdDInt32'],
632 ········['../classgmx_1_1SimdDInt32.xhtml#a4107f8bf681a5cfe0abd34bffd5d952b',·1,·'gmx::SimdDInt32::SimdDInt32()']632 ········['../classgmx_1_1SimdDInt32.xhtml#a4107f8bf681a5cfe0abd34bffd5d952b',·1,·'gmx::SimdDInt32::SimdDInt32()']
633 ····]],633 ····]],
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Offset 22, 30 lines modifiedOffset 22, 30 lines modified
22 ····['uniquedeviceid_14',·['uniqueDeviceId',·['../device__management_8h.xhtml#ab7595ed839026b4d41d8eb72701a80eb',·1,·'device_management_common.cpp']]],22 ····['uniquedeviceid_14',·['uniqueDeviceId',·['../device__management_8h.xhtml#ab7595ed839026b4d41d8eb72701a80eb',·1,·'device_management_common.cpp']]],
23 ····['unit_15',·['unit',·['../classgmx_1_1EnergyTerm.xhtml#aef5ad0000c2fbbc74c57f0b5e0ddb409',·1,·'gmx::EnergyTerm']]],23 ····['unit_15',·['unit',·['../classgmx_1_1EnergyTerm.xhtml#aef5ad0000c2fbbc74c57f0b5e0ddb409',·1,·'gmx::EnergyTerm']]],
24 ····['unitcelliscompact_16',·['UnitCellIsCompact',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9ad4d785ddf0c77e7b697efd2b5ec376e1',·1,·'gmx']]],24 ····['unitcelliscompact_16',·['UnitCellIsCompact',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9ad4d785ddf0c77e7b697efd2b5ec376e1',·1,·'gmx']]],
25 ····['unitcellisrectangular_17',·['UnitCellIsRectangular',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a8e7bda81ce54b8cf90c3b856c83e7d9f',·1,·'gmx']]],25 ····['unitcellisrectangular_17',·['UnitCellIsRectangular',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a8e7bda81ce54b8cf90c3b856c83e7d9f',·1,·'gmx']]],
26 ····['unitcellistriclinic_18',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]],26 ····['unitcellistriclinic_18',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]],
27 ····['unitcelltype_19',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],27 ····['unitcelltype_19',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],
28 ····['unitcelltypenames_20',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],28 ····['unitcelltypenames_20',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],
 29 ····['unitvector_21',·['unitvector',·['../namespacegmx.xhtml#a53215047e2f488dfbf48164090c07b40',·1,·'gmx::unitVector()'],
29 ····['unitvector_21',·['unitvector',·['../classgmx_1_1BasicVector.xhtml#a2fc805de143df5ecfe38f2cb50d84e6c',·1,·'gmx::BasicVector::unitVector()'],30 ········['../classgmx_1_1BasicVector.xhtml#a2fc805de143df5ecfe38f2cb50d84e6c',·1,·'gmx::BasicVector::unitVector()']
30 ········['../namespacegmx.xhtml#a53215047e2f488dfbf48164090c07b40',·1,·'gmx::unitVector(const·VectorType·&amp;v)'] 
31 ····]],31 ····]],
32 ····['unity_22',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]],32 ····['unity_22',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]],
33 ····['unknown_23',·['unknown',·['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'],33 ····['unknown_23',·['unknown',·['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'],
 34 ········['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'],
34 ········['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],35 ········['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h']
35 ········['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'] 
36 ····]],36 ····]],
37 ····['unpackrecvbufkernel_24',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],37 ····['unpackrecvbufkernel_24',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],
38 ····['unpaddedarrayref_25',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],38 ····['unpaddedarrayref_25',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],
39 ····['unpaddedconstarrayref_26',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]],39 ····['unpaddedconstarrayref_26',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]],
40 ····['unset_27',·['Unset',·['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cac9f88e098f6fe4e4e112eeb05ccb9671',·1,·'md_enums.h']]],40 ····['unset_27',·['Unset',·['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cac9f88e098f6fe4e4e112eeb05ccb9671',·1,·'md_enums.h']]],
41 ····['unsignedchartostring_28',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]],41 ····['unsignedchartostring_28',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]],
42 ····['update_29',·['update',·['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()'],42 ····['update_29',·['update',·['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()'],
43 ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update'], 
44 ········['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()']43 ········['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'],
 44 ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update']
45 ····]],45 ····]],
46 ····['update_5fconstrain_5fgpu_2eh_30',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]],46 ····['update_5fconstrain_5fgpu_2eh_30',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]],
47 ····['update_5fcoords_31',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]],47 ····['update_5fcoords_31',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]],
48 ····['update_5fdisres_5fhistory_32',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]],48 ····['update_5fdisres_5fhistory_32',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]],
49 ····['update_5ffor_5fconstraint_5fvirial_33',·['update_for_constraint_virial',·['../classgmx_1_1Update.xhtml#acbd679269aa6945d6922c029770e8a84',·1,·'gmx::Update']]],49 ····['update_5ffor_5fconstraint_5fvirial_33',·['update_for_constraint_virial',·['../classgmx_1_1Update.xhtml#acbd679269aa6945d6922c029770e8a84',·1,·'gmx::Update']]],
50 ····['update_5fsd_5fsecond_5fhalf_34',·['update_sd_second_half',·['../classgmx_1_1Update.xhtml#ab0206e61c30553bd8aa268891c466509',·1,·'gmx::Update']]],50 ····['update_5fsd_5fsecond_5fhalf_34',·['update_sd_second_half',·['../classgmx_1_1Update.xhtml#ab0206e61c30553bd8aa268891c466509',·1,·'gmx::Update']]],
51 ····['update_5ftemperature_5fconstants_35',·['update_temperature_constants',·['../classgmx_1_1Update.xhtml#afa5d8919006df7093a2224fbc2f9fd4c',·1,·'gmx::Update']]],51 ····['update_5ftemperature_5fconstants_35',·['update_temperature_constants',·['../classgmx_1_1Update.xhtml#afa5d8919006df7093a2224fbc2f9fd4c',·1,·'gmx::Update']]],
Offset 65, 16 lines modifiedOffset 65, 16 lines modified
65 ········['../classgmx_1_1UpdateGroups.xhtml',·1,·'gmx::UpdateGroups']65 ········['../classgmx_1_1UpdateGroups.xhtml',·1,·'gmx::UpdateGroups']
66 ····]],66 ····]],
67 ····['updategroups_2eh_48',·['updategroups.h',·['../updategroups_8h.xhtml',·1,·'']]],67 ····['updategroups_2eh_48',·['updategroups.h',·['../updategroups_8h.xhtml',·1,·'']]],
68 ····['updategroupscog_49',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#af4073554edea0cc98542003e47f7dccd',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'],68 ····['updategroupscog_49',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#af4073554edea0cc98542003e47f7dccd',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'],
69 ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog']69 ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog']
70 ····]],70 ····]],
71 ····['updategroupscog_2eh_50',·['updategroupscog.h',·['../updategroupscog_8h.xhtml',·1,·'']]],71 ····['updategroupscog_2eh_50',·['updategroupscog.h',·['../updategroupscog_8h.xhtml',·1,·'']]],
 72 ····['updatehistory_51',·['updatehistory',·['../classgmx_1_1Awh.xhtml#ad138cec7cc1fefd7c1787d5f94279494',·1,·'gmx::Awh::updateHistory()'],
72 ····['updatehistory_51',·['updatehistory',·['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()'],73 ········['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()']
73 ········['../classgmx_1_1Awh.xhtml#ad138cec7cc1fefd7c1787d5f94279494',·1,·'gmx::Awh::updateHistory()'] 
74 ····]],74 ····]],
75 ····['updatepositions_52',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],75 ····['updatepositions_52',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],
76 ····['updateprevsteppullcom_53',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],76 ····['updateprevsteppullcom_53',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],
77 ····['updatevelocities_54',·['updateVelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx']]],77 ····['updatevelocities_54',·['updateVelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx']]],
78 ····['updatewithdatapoint_55',·['updateWithDataPoint',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a5293fc09bb63cc379eed9ca1fa20c760',·1,·'gmx::ExponentialMovingAverage']]],78 ····['updatewithdatapoint_55',·['updateWithDataPoint',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a5293fc09bb63cc379eed9ca1fa20c760',·1,·'gmx::ExponentialMovingAverage']]],
79 ····['uppercorner_56',·['upperCorner',·['../structgmx_1_1GridDimensions.xhtml#acd92331d1b9d316fe200653256a9c88c',·1,·'gmx::GridDimensions']]],79 ····['uppercorner_56',·['upperCorner',·['../structgmx_1_1GridDimensions.xhtml#acd92331d1b9d316fe200653256a9c88c',·1,·'gmx::GridDimensions']]],
80 ····['upstring_57',·['upstring',·['../cstringutil_8h.xhtml#a74173c7afe5600452edf4956ae58bbe8',·1,·'cstringutil.cpp']]],80 ····['upstring_57',·['upstring',·['../cstringutil_8h.xhtml#a74173c7afe5600452edf4956ae58bbe8',·1,·'cstringutil.cpp']]],
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./usr/share/doc/gromacs/html/doxygen/xml/index.xml.gz
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191 KB
index.xml
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191 KB
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Offset 76316, 20 lines modifiedOffset 76316, 14 lines modified
76316 ····<member·refid="template_8cpp_1a0ddf1224851353fc92bfbff6f499fa97"·kind="function">76316 ····<member·refid="template_8cpp_1a0ddf1224851353fc92bfbff6f499fa97"·kind="function">
76317 ······<name>main</name>76317 ······<name>main</name>
76318 ····</member>76318 ····</member>
76319 ··</compound>76319 ··</compound>
76320 ··<compound·refid="abstractdata_8cpp"·kind="file">76320 ··<compound·refid="abstractdata_8cpp"·kind="file">
76321 ····<name>abstractdata.cpp</name>76321 ····<name>abstractdata.cpp</name>
76322 ··</compound>76322 ··</compound>
76323 ··<compound·refid="arraydata_8cpp"·kind="file"> 
76324 ····<name>arraydata.cpp</name> 
76325 ··</compound> 
76326 ··<compound·refid="tests_2arraydata_8cpp"·kind="file"> 
76327 ····<name>arraydata.cpp</name> 
76328 ··</compound> 
76329 ··<compound·refid="dataframe_8cpp"·kind="file">76323 ··<compound·refid="dataframe_8cpp"·kind="file">
76330 ····<name>dataframe.cpp</name>76324 ····<name>dataframe.cpp</name>
76331 ··</compound>76325 ··</compound>
76332 ··<compound·refid="datamodule_8cpp"·kind="file">76326 ··<compound·refid="datamodule_8cpp"·kind="file">
76333 ····<name>datamodule.cpp</name>76327 ····<name>datamodule.cpp</name>
76334 ··</compound>76328 ··</compound>
76335 ··<compound·refid="datamodulemanager_8cpp"·kind="file">76329 ··<compound·refid="datamodulemanager_8cpp"·kind="file">
Offset 76388, 14 lines modifiedOffset 76382, 20 lines modified
76388 ··</compound>76382 ··</compound>
76389 ··<compound·refid="analysisdata_8cpp"·kind="file">76383 ··<compound·refid="analysisdata_8cpp"·kind="file">
76390 ····<name>analysisdata.cpp</name>76384 ····<name>analysisdata.cpp</name>
76391 ··</compound>76385 ··</compound>
76392 ··<compound·refid="tests_2analysisdata_8cpp"·kind="file">76386 ··<compound·refid="tests_2analysisdata_8cpp"·kind="file">
76393 ····<name>analysisdata.cpp</name>76387 ····<name>analysisdata.cpp</name>
76394 ··</compound>76388 ··</compound>
 76389 ··<compound·refid="arraydata_8cpp"·kind="file">
 76390 ····<name>arraydata.cpp</name>
 76391 ··</compound>
 76392 ··<compound·refid="tests_2arraydata_8cpp"·kind="file">
 76393 ····<name>arraydata.cpp</name>
 76394 ··</compound>
76395 ··<compound·refid="datatest_8cpp"·kind="file">76395 ··<compound·refid="datatest_8cpp"·kind="file">
76396 ····<name>datatest.cpp</name>76396 ····<name>datatest.cpp</name>
76397 ··</compound>76397 ··</compound>
76398 ··<compound·refid="datatest_8h"·kind="file">76398 ··<compound·refid="datatest_8h"·kind="file">
76399 ····<name>datatest.h</name>76399 ····<name>datatest.h</name>
76400 ··</compound>76400 ··</compound>
76401 ··<compound·refid="mock__datamodule_8cpp"·kind="file">76401 ··<compound·refid="mock__datamodule_8cpp"·kind="file">
Offset 76406, 38 lines modifiedOffset 76406, 26 lines modified
76406 ··</compound>76406 ··</compound>
76407 ··<compound·refid="awh_8cpp"·kind="file">76407 ··<compound·refid="awh_8cpp"·kind="file">
76408 ····<name>awh.cpp</name>76408 ····<name>awh.cpp</name>
76409 ··</compound>76409 ··</compound>
76410 ··<compound·refid="awh_8h"·kind="file">76410 ··<compound·refid="awh_8h"·kind="file">
76411 ····<name>awh.h</name>76411 ····<name>awh.h</name>
76412 ··</compound>76412 ··</compound>
76413 ··<compound·refid="bias_8cpp"·kind="file"> 
76414 ····<name>bias.cpp</name> 
76415 ··</compound> 
76416 ··<compound·refid="tests_2bias_8cpp"·kind="file"> 
76417 ····<name>bias.cpp</name> 
76418 ··</compound> 
76419 ··<compound·refid="bias_8h"·kind="file">76413 ··<compound·refid="bias_8h"·kind="file">
76420 ····<name>bias.h</name>76414 ····<name>bias.h</name>
76421 ··</compound>76415 ··</compound>
76422 ··<compound·refid="biasgrid_8h"·kind="file">76416 ··<compound·refid="biasgrid_8h"·kind="file">
76423 ····<name>biasgrid.h</name>76417 ····<name>biasgrid.h</name>
76424 ··</compound>76418 ··</compound>
76425 ··<compound·refid="biasparams_8cpp"·kind="file">76419 ··<compound·refid="biasparams_8cpp"·kind="file">
76426 ····<name>biasparams.cpp</name>76420 ····<name>biasparams.cpp</name>
76427 ··</compound>76421 ··</compound>
76428 ··<compound·refid="biasparams_8h"·kind="file">76422 ··<compound·refid="biasparams_8h"·kind="file">
76429 ····<name>biasparams.h</name>76423 ····<name>biasparams.h</name>
76430 ··</compound>76424 ··</compound>
76431 ··<compound·refid="biassharing_8cpp"·kind="file"> 
76432 ····<name>biassharing.cpp</name> 
76433 ··</compound> 
76434 ··<compound·refid="tests_2biassharing_8cpp"·kind="file"> 
76435 ····<name>biassharing.cpp</name> 
76436 ··</compound> 
76437 ··<compound·refid="biassharing_8h"·kind="file">76425 ··<compound·refid="biassharing_8h"·kind="file">
76438 ····<name>biassharing.h</name>76426 ····<name>biassharing.h</name>
76439 ··</compound>76427 ··</compound>
76440 ··<compound·refid="biasstate_8h"·kind="file">76428 ··<compound·refid="biasstate_8h"·kind="file">
76441 ····<name>biasstate.h</name>76429 ····<name>biasstate.h</name>
76442 ··</compound>76430 ··</compound>
76443 ··<compound·refid="biaswriter_8cpp"·kind="file">76431 ··<compound·refid="biaswriter_8cpp"·kind="file">
Offset 76493, 23 lines modifiedOffset 76481, 35 lines modified
76493 ··</compound>76481 ··</compound>
76494 ··<compound·refid="awh__setup_8cpp"·kind="file">76482 ··<compound·refid="awh__setup_8cpp"·kind="file">
76495 ····<name>awh_setup.cpp</name>76483 ····<name>awh_setup.cpp</name>
76496 ··</compound>76484 ··</compound>
76497 ··<compound·refid="awh__setup_8h"·kind="file">76485 ··<compound·refid="awh__setup_8h"·kind="file">
76498 ····<name>awh_setup.h</name>76486 ····<name>awh_setup.h</name>
76499 ··</compound>76487 ··</compound>
 76488 ··<compound·refid="bias_8cpp"·kind="file">
 76489 ····<name>bias.cpp</name>
 76490 ··</compound>
 76491 ··<compound·refid="tests_2bias_8cpp"·kind="file">
 76492 ····<name>bias.cpp</name>
 76493 ··</compound>
76500 ··<compound·refid="bias__fep__lambda__state_8cpp"·kind="file">76494 ··<compound·refid="bias__fep__lambda__state_8cpp"·kind="file">
76501 ····<name>bias_fep_lambda_state.cpp</name>76495 ····<name>bias_fep_lambda_state.cpp</name>
76502 ··</compound>76496 ··</compound>
76503 ··<compound·refid="biasgrid_8cpp"·kind="file">76497 ··<compound·refid="biasgrid_8cpp"·kind="file">
76504 ····<name>biasgrid.cpp</name>76498 ····<name>biasgrid.cpp</name>
76505 ··</compound>76499 ··</compound>
76506 ··<compound·refid="tests_2biasgrid_8cpp"·kind="file">76500 ··<compound·refid="tests_2biasgrid_8cpp"·kind="file">
76507 ····<name>biasgrid.cpp</name>76501 ····<name>biasgrid.cpp</name>
76508 ··</compound>76502 ··</compound>
 76503 ··<compound·refid="biassharing_8cpp"·kind="file">
 76504 ····<name>biassharing.cpp</name>
 76505 ··</compound>
 76506 ··<compound·refid="tests_2biassharing_8cpp"·kind="file">
 76507 ····<name>biassharing.cpp</name>
 76508 ··</compound>
76509 ··<compound·refid="biasstate_8cpp"·kind="file">76509 ··<compound·refid="biasstate_8cpp"·kind="file">
76510 ····<name>biasstate.cpp</name>76510 ····<name>biasstate.cpp</name>
76511 ··</compound>76511 ··</compound>
76512 ··<compound·refid="tests_2biasstate_8cpp"·kind="file">76512 ··<compound·refid="tests_2biasstate_8cpp"·kind="file">
76513 ····<name>biasstate.cpp</name>76513 ····<name>biasstate.cpp</name>
76514 ··</compound>76514 ··</compound>
76515 ··<compound·refid="friction__metric_8cpp"·kind="file">76515 ··<compound·refid="friction__metric_8cpp"·kind="file">
Offset 76541, 20 lines modifiedOffset 76541, 14 lines modified
76541 ··</compound>76541 ··</compound>
76542 ··<compound·refid="colvarsMDModule_8h"·kind="file">76542 ··<compound·refid="colvarsMDModule_8h"·kind="file">
76543 ····<name>colvarsMDModule.h</name>76543 ····<name>colvarsMDModule.h</name>
76544 ··</compound>76544 ··</compound>
76545 ··<compound·refid="colvarsMDModule__stub_8cpp"·kind="file">76545 ··<compound·refid="colvarsMDModule__stub_8cpp"·kind="file">
76546 ····<name>colvarsMDModule_stub.cpp</name>76546 ····<name>colvarsMDModule_stub.cpp</name>
76547 ··</compound>76547 ··</compound>
76548 ··<compound·refid="colvarsoptions_8cpp"·kind="file"> 
76549 ····<name>colvarsoptions.cpp</name> 
76550 ··</compound> 
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pdftotext {} -
    
Offset 17658, 15 lines modifiedOffset 17658, 15 lines modified
17658 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons·Sijbers,·Balint·Soproni,·David17658 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons·Sijbers,·Balint·Soproni,·David
17659 van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten17659 van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten
17660 Wolf,·Artem·Zhmurov17660 Wolf,·Artem·Zhmurov
17661 Project·leaders:·Berk·Hess,·Erik·Lindahl17661 Project·leaders:·Berk·Hess,·Erik·Lindahl
17662 ©·1991·–·2000:17662 ©·1991·–·2000:
17663 Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen,17663 Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen,
17664 The·Netherlands.17664 The·Netherlands.
17665 ©·2001·–·2026:17665 ©·2001·–·2025:
17666 The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University,17666 The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University,
17667 Sweden.17667 Sweden.
17668 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time·of·the·contributors·–·our·first17668 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time·of·the·contributors·–·our·first
17669 priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information17669 priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information
17670 is·not·entirely·correct.17670 is·not·entirely·correct.
17671 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer17671 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer
17672 discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·596)),·or·open·an·issue·on·our·issue17672 discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·596)),·or·open·an·issue·on·our·issue
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00011680:·6973·7472·792c·2055·6e69·7665·7273·6974··istry,·Universit00011680:·6973·7472·792c·2055·6e69·7665·7273·6974··istry,·Universit
00011690:·7920·6f66·2047·726f·6e69·6e67·656e·2e0a··y·of·Groningen..00011690:·7920·6f66·2047·726f·6e69·6e67·656e·2e0a··y·of·Groningen..
000116a0:·4e69·6a65·6e62·6f72·6768·2034·2c20·3937··Nijenborgh·4,·97000116a0:·4e69·6a65·6e62·6f72·6768·2034·2c20·3937··Nijenborgh·4,·97
000116b0:·3437·2041·4720·4772·6f6e·696e·6765·6e2c··47·AG·Groningen,000116b0:·3437·2041·4720·4772·6f6e·696e·6765·6e2c··47·AG·Groningen,
000116c0:·2054·6865·204e·6574·6865·726c·616e·6473···The·Netherlands000116c0:·2054·6865·204e·6574·6865·726c·616e·6473···The·Netherlands
000116d0:·2e3c·2f70·3e0a·3c2f·6469·763e·3c2f·626c··.</p>.</div></bl000116d0:·2e3c·2f70·3e0a·3c2f·6469·763e·3c2f·626c··.</p>.</div></bl
000116e0:·6f63·6b71·756f·7465·3e0a·3c70·3ec2·a920··ockquote>.<p>..·000116e0:·6f63·6b71·756f·7465·3e0a·3c70·3ec2·a920··ockquote>.<p>..·
000116f0:·3230·3031·20e2·8093·2032·3032·363a·3c2f··2001·...·2026:</000116f0:·3230·3031·20e2·8093·2032·3032·353a·3c2f··2001·...·2025:</
00011700:·703e·0a3c·626c·6f63·6b71·756f·7465·3e0a··p>.<blockquote>.00011700:·703e·0a3c·626c·6f63·6b71·756f·7465·3e0a··p>.<blockquote>.
00011710:·3c64·6976·3e3c·703e·5468·6520·4752·4f4d··<div><p>The·GROM00011710:·3c64·6976·3e3c·703e·5468·6520·4752·4f4d··<div><p>The·GROM
00011720:·4143·5320·6465·7665·6c6f·706d·656e·7420··ACS·development·00011720:·4143·5320·6465·7665·6c6f·706d·656e·7420··ACS·development·
00011730:·7465·616d·7320·6174·2074·6865·2052·6f79··teams·at·the·Roy00011730:·7465·616d·7320·6174·2074·6865·2052·6f79··teams·at·the·Roy
00011740:·616c·2049·6e73·7469·7475·7465·206f·6620··al·Institute·of·00011740:·616c·2049·6e73·7469·7475·7465·206f·6620··al·Institute·of·
00011750:·5465·6368·6e6f·6c6f·6779·2061·6e64·0a55··Technology·and.U00011750:·5465·6368·6e6f·6c6f·6779·2061·6e64·0a55··Technology·and.U
00011760:·7070·7361·6c61·2055·6e69·7665·7273·6974··ppsala·Universit00011760:·7070·7361·6c61·2055·6e69·7665·7273·6974··ppsala·Universit
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Offset 457, 15 lines modifiedOffset 457, 15 lines modified
457 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons457 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons
458 Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,458 Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,
459 Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov459 Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov
460 Project·leaders:·Berk·Hess,·Erik·Lindahl460 Project·leaders:·Berk·Hess,·Erik·Lindahl
461 ©·1991·–·2000:461 ©·1991·–·2000:
462 ·····Department·of·Biophysical·Chemistry,·University·of·Groningen.462 ·····Department·of·Biophysical·Chemistry,·University·of·Groningen.
463 ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands.463 ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands.
464 ©·2001·–·2026:464 ©·2001·–·2025:
465 ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology465 ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology
466 ·····and·Uppsala·University,·Sweden.466 ·····and·Uppsala·University,·Sweden.
467 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time467 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time
468 of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is468 of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is
469 worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not469 worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not
470 entirely·correct.470 entirely·correct.
471 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·_\x8u_\x8s_\x8e_\x8r471 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·_\x8u_\x8s_\x8e_\x8r
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Offset 11088, 15 lines modifiedOffset 11088, 15 lines modified
11088 ········"2019":·[30,·38,·193,·204,·239,·240,·241,·242,·259,·265,·266,·267,·268,·269,·282,·294,·371],11088 ········"2019":·[30,·38,·193,·204,·239,·240,·241,·242,·259,·265,·266,·267,·268,·269,·282,·294,·371],
11089 ········"2020":·[4,·11,·15,·17,·28,·38,·180,·193,·255,·275,·281,·282,·283,·284,·285,·286,·287,·311,·337,·348,·371],11089 ········"2020":·[4,·11,·15,·17,·28,·38,·180,·193,·255,·275,·281,·282,·283,·284,·285,·286,·287,·311,·337,·348,·371],
11090 ········"2021":·[38,·193,·266,·269,·270,·291,·297,·298,·299,·300,·301,·302,·311,·326,·371],11090 ········"2021":·[38,·193,·266,·269,·270,·291,·297,·298,·299,·300,·301,·302,·311,·326,·371],
11091 ········"2022":·[0,·17,·27,·28,·38,·271,·285,·286,·307,·313,·314,·315,·316,·317,·318,·327,·371],11091 ········"2022":·[0,·17,·27,·28,·38,·271,·285,·286,·307,·313,·314,·315,·316,·317,·318,·327,·371],
11092 ········"2023":·[38,·122,·193,·287,·301,·302,·323,·329,·330,·331,·332,·333,·334,·371],11092 ········"2023":·[38,·122,·193,·287,·301,·302,·323,·329,·330,·331,·332,·333,·334,·371],
11093 ········"2024":·[37,·38,·80,·83,·122,·195,·242,·315,·316,·317,·318,·339,·345,·352,·353,·366],11093 ········"2024":·[37,·38,·80,·83,·122,·195,·242,·315,·316,·317,·318,·339,·345,·352,·353,·366],
11094 ········"2025":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·328,·329,·330,·331,·332,·333,·334,·335,·336,·337,·338,·339,·340,·341,·342,·343,·344,·346,·347,·349,·350,·351,·352,·353,·354,·355,·357,·358,·359,·360,·361,·362,·363,·364,·365,·366,·367,·368,·369,·370,·371,·372,·373,·374,·375],11094 ········"2025":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·328,·329,·330,·331,·332,·333,·334,·335,·336,·337,·338,·339,·340,·341,·342,·343,·344,·346,·347,·349,·350,·351,·352,·353,·354,·355,·357,·358,·359,·360,·361,·362,·363,·364,·365,·366,·367,·368,·369,·370,·371,·372,·373,·374,·375],
11095 ········"2026":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66[·...·truncated·by·diffoscope;·len:·1512,·SHA:·3546b62eb38b0488a0d46d01b1270ca1c860ea1a49cea1a65c8b33e88fcb066c·...·]],11095 ········"2026":·[249,·356],
11096 ········"2027":·249,11096 ········"2027":·249,
11097 ········"2028":·249,11097 ········"2028":·249,
11098 ········"2029":·223,11098 ········"2029":·223,
11099 ········"2031":·242,11099 ········"2031":·242,
11100 ········"2032":·[49,·193,·242],11100 ········"2032":·[49,·193,·242],
11101 ········"2033":·223,11101 ········"2033":·223,
11102 ········"2037":·[223,·239,·250],11102 ········"2037":·[223,·239,·250],
Generated by diffoscope 294